BLASTX nr result
ID: Papaver25_contig00039379
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00039379
(505 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM74357.1|AC115686_24 Putative retroelement [Oryza sativa Ja... 67 5e-20
gb|ABB47199.1| retrotransposon protein, putative, Ty1-copia subc... 67 5e-20
dbj|BAF36296.1| hypothetical protein [Ipomoea trifida] 68 8e-20
gb|AAS79613.1| putative copia-like polyprotein [Ipomoea trifida] 68 8e-20
emb|CAD39862.2| OSJNBa0036B17.5 [Oryza sativa Japonica Group] 70 8e-20
gb|ABA97377.1| retrotransposon protein, putative, Ty1-copia subc... 67 1e-19
dbj|BAH80079.1| putative retrotransposon protein [Oryza sativa I... 69 3e-19
gb|ABA98087.1| retrotransposon protein, putative, Ty1-copia subc... 69 5e-19
emb|CAD40421.3| OSJNBa0065J03.17 [Oryza sativa Japonica Group] 68 8e-19
gb|ABF96131.1| retrotransposon protein, putative, Ty1-copia subc... 66 2e-17
emb|CAN61800.1| hypothetical protein VITISV_044293 [Vitis vinifera] 73 3e-17
gb|ABA96113.2| retrotransposon protein, putative, Ty1-copia subc... 72 6e-17
gb|EMT16342.1| hypothetical protein F775_52438 [Aegilops tauschii] 62 8e-17
emb|CAE05047.2| OSJNBa0049H08.8 [Oryza sativa Japonica Group] 67 1e-16
emb|CAH66646.1| OSIGBa0146I21.3 [Oryza sativa Indica Group] 67 1e-16
gb|ABA92033.1| retrotransposon protein, putative, Ty1-copia subc... 69 2e-16
gb|AEJ07957.1| polyprotein [Sorghum propinquum] 63 1e-15
dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis tha... 59 1e-15
ref|XP_004237326.1| PREDICTED: uncharacterized protein LOC101252... 69 2e-15
gb|AAP50929.1| putative polyprotein [Oryza sativa Japonica Group] 68 9e-15
>gb|AAM74357.1|AC115686_24 Putative retroelement [Oryza sativa Japonica Group]
Length = 852
Score = 66.6 bits (161), Expect(3) = 5e-20
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +1
Query: 310 YLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
YLS I AL+Y A T P++ +VNLLAR+SSAPT+RHWNG+ I YL+ T D+ LF
Sbjct: 616 YLSAIGALMYLANGTRPDIAFAVNLLARFSSAPTKRHWNGVKQIFRYLRGTQDLGLF 672
Score = 43.1 bits (100), Expect(3) = 5e-20
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Frame = +2
Query: 5 FVILATYVDVTYMMGALDVVRDPTSYSKSKFEMRHLGKARPKIEVAYI-----ILFHQFA 169
F I++ YVD ++G V+++ +SY K++FEM+ LGK + + +L HQ+A
Sbjct: 508 FCIISVYVDDLNIIGTTQVIKEASSYLKTEFEMKELGKTTYCLGLQLEHTPEGVLLHQYA 567
Query: 170 YV 175
Y+
Sbjct: 568 YI 569
Score = 33.5 bits (75), Expect(3) = 5e-20
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 168 HMSKVFREFK-KDMHPASTPMVSRGSNVSK*PIRLKEDDEDV*GDE 302
++ K+ +F KD +P TPMV R V P R +E++E++ G E
Sbjct: 568 YIQKILEKFNMKDSYPTRTPMVVRSLAVESDPFRPQENNEELLGPE 613
>gb|ABB47199.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 734
Score = 66.6 bits (161), Expect(3) = 5e-20
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +1
Query: 310 YLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
YLS I AL+Y A T P++ +VNLLAR+SSAPT+RHWNG+ I YL+ T D+ LF
Sbjct: 498 YLSAIGALMYLANGTRPDIAFAVNLLARFSSAPTKRHWNGVKQIFRYLRGTQDLGLF 554
Score = 43.1 bits (100), Expect(3) = 5e-20
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Frame = +2
Query: 5 FVILATYVDVTYMMGALDVVRDPTSYSKSKFEMRHLGKARPKIEVAYI-----ILFHQFA 169
F I++ YVD ++G V+++ +SY K++FEM+ LGK + + +L HQ+A
Sbjct: 390 FCIISVYVDDLNIIGTTQVIKEASSYLKTEFEMKELGKTTYCLGLQLEHTPEGVLLHQYA 449
Query: 170 YV 175
Y+
Sbjct: 450 YI 451
Score = 33.5 bits (75), Expect(3) = 5e-20
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 168 HMSKVFREFK-KDMHPASTPMVSRGSNVSK*PIRLKEDDEDV*GDE 302
++ K+ +F KD +P TPMV R V P R +E++E++ G E
Sbjct: 450 YIQKILEKFNMKDSYPTRTPMVVRSLAVESDPFRPQENNEELLGPE 495
>dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]
Length = 1291
Score = 67.8 bits (164), Expect(3) = 8e-20
Identities = 32/57 (56%), Positives = 44/57 (77%)
Frame = +1
Query: 310 YLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
YLS I ALLY A CT P++ SVNLLAR+S++PT+RHW+G+ +I YL+ T D+ L+
Sbjct: 947 YLSAIGALLYLANCTRPDIAFSVNLLARFSASPTRRHWSGVKHIFRYLQGTKDLGLY 1003
Score = 40.8 bits (94), Expect(3) = 8e-20
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 168 HMSKVFREFKKDM-HPASTPMVSRGSNVSK*PIRLKEDDEDV*GDE 302
+++K+ +F D HP STPMV R K P R KED+ED+ G E
Sbjct: 899 YVNKLLEKFYMDKSHPLSTPMVVRSLEADKDPFRPKEDNEDILGPE 944
Score = 33.9 bits (76), Expect(3) = 8e-20
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Frame = +2
Query: 5 FVILATYVDVTYMMGALDVVRDPTSYSKSKFEMRHLGKAR--PKIEVAYI---ILFHQFA 169
F I++ YVD ++G + + SY K++FEM+ LGK + +++ ++ I HQ
Sbjct: 839 FCIISVYVDDMNIIGTNKDIIEACSYLKAEFEMKDLGKTKFCLGLQIEHLPNGIFIHQAN 898
Query: 170 YV 175
YV
Sbjct: 899 YV 900
>gb|AAS79613.1| putative copia-like polyprotein [Ipomoea trifida]
Length = 1190
Score = 67.8 bits (164), Expect(3) = 8e-20
Identities = 32/57 (56%), Positives = 44/57 (77%)
Frame = +1
Query: 310 YLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
YLS I ALLY A CT P++ SVNLLAR+S++PT+RHW+G+ +I YL+ T D+ L+
Sbjct: 947 YLSAIGALLYLANCTRPDIAFSVNLLARFSASPTRRHWSGVKHIFRYLQGTKDLGLY 1003
Score = 40.8 bits (94), Expect(3) = 8e-20
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 168 HMSKVFREFKKDM-HPASTPMVSRGSNVSK*PIRLKEDDEDV*GDE 302
+++K+ +F D HP STPMV R K P R KED+ED+ G E
Sbjct: 899 YVNKLLEKFYMDKSHPLSTPMVVRSLEADKDPFRPKEDNEDILGPE 944
Score = 33.9 bits (76), Expect(3) = 8e-20
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Frame = +2
Query: 5 FVILATYVDVTYMMGALDVVRDPTSYSKSKFEMRHLGKAR--PKIEVAYI---ILFHQFA 169
F I++ YVD ++G + + SY K++FEM+ LGK + +++ ++ I HQ
Sbjct: 839 FCIISVYVDDMNIIGTNKDIIEACSYLKAEFEMKDLGKTKFCLGLQIEHLPNGIFIHQAN 898
Query: 170 YV 175
YV
Sbjct: 899 YV 900
>emb|CAD39862.2| OSJNBa0036B17.5 [Oryza sativa Japonica Group]
Length = 443
Score = 70.1 bits (170), Expect(3) = 8e-20
Identities = 34/60 (56%), Positives = 43/60 (71%)
Frame = +1
Query: 301 NFSYLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
+F YLS I AL+Y A T P++ SVNLLARYS+APT+RHW G+ N+ YL T D+ LF
Sbjct: 201 DFPYLSAIGALMYLANSTRPDIAFSVNLLARYSAAPTKRHWTGVKNVFRYLNGTRDLGLF 260
Score = 41.2 bits (95), Expect(3) = 8e-20
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 162 SLHMSKVFREFKKDM-HPASTPMVSRGSNVSK*PIRLKEDDEDV*GDEF 305
S + K+ +F D +P+ TPMV R +V K P R KED EDV G +F
Sbjct: 154 SAYAQKMLEKFNMDKSYPSKTPMVVRSLDVEKDPFRPKEDGEDVLGPDF 202
Score = 31.2 bits (69), Expect(3) = 8e-20
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +2
Query: 5 FVILATYVDVTYMMGALDVVRDPTSYSKSKFEMRHLGKAR--PKIEVAYI---ILFHQFA 169
F I++ YVD ++G + + + K++FEM+ LG+ + +++ ++ IL HQ A
Sbjct: 96 FCIISVYVDDLNIIGNTQDINEARHHLKTEFEMKDLGQTKFCLGLQLEHLPSGILVHQSA 155
Query: 170 Y 172
Y
Sbjct: 156 Y 156
>gb|ABA97377.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 836
Score = 67.0 bits (162), Expect(3) = 1e-19
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +1
Query: 301 NFSYLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
+F YLS I AL+Y A T P++ SVNLLARYS+APT+ HW G+ N+ YL T D+ LF
Sbjct: 689 DFPYLSAIGALMYLANSTRPDIAFSVNLLARYSAAPTKCHWTGVKNVFRYLNGTRDLGLF 748
Score = 43.9 bits (102), Expect(3) = 1e-19
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 162 SLHMSKVFREFKKDM-HPASTPMVSRGSNVSK*PIRLKEDDEDV*GDEF 305
S + K+ +F D +P+ TPMV R NV K P R KED EDV G +F
Sbjct: 642 SAYTQKILEKFNMDKSYPSKTPMVVRSLNVEKDPFRPKEDGEDVLGPDF 690
Score = 31.2 bits (69), Expect(3) = 1e-19
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +2
Query: 5 FVILATYVDVTYMMGALDVVRDPTSYSKSKFEMRHLGKAR--PKIEVAYI---ILFHQFA 169
F I++ YV+ ++G + + Y K++FEM+ LG+ + +++ ++ IL HQ A
Sbjct: 584 FCIISVYVNDLNIIGNTQDINEARHYLKTEFEMKDLGQTKLCLGLQLEHLPSGILVHQSA 643
Query: 170 Y 172
Y
Sbjct: 644 Y 644
>dbj|BAH80079.1| putative retrotransposon protein [Oryza sativa Indica Group]
Length = 1111
Score = 69.3 bits (168), Expect(3) = 3e-19
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = +1
Query: 301 NFSYLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
+F YLS+I L+Y A T P++ SVNLLARYS+APT RHW G+ N+ Y+ T D+ LF
Sbjct: 844 DFPYLSVIGTLMYHANSTRPDIAFSVNLLARYSAAPTNRHWTGVKNVFRYINGTRDLGLF 903
Score = 38.9 bits (89), Expect(3) = 3e-19
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 162 SLHMSKVFREFKKDM-HPASTPMVSRGSNVSK*PIRLKEDDEDV*GDEF 305
S + K+ +F D + + TPMV R +V K P R KED EDV G +F
Sbjct: 797 SAYTQKILEKFNMDKSYSSKTPMVVRSLDVEKDPFRPKEDGEDVLGPDF 845
Score = 32.3 bits (72), Expect(3) = 3e-19
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +2
Query: 5 FVILATYVDVTYMMGALDVVRDPTSYSKSKFEMRHLGKAR--PKIEVAYI---ILFHQFA 169
F I++ YVD ++G + + + K++FEM+ LG+ + +++ ++ IL HQ A
Sbjct: 739 FCIISVYVDALNIIGNTQDINEARHHLKTEFEMKDLGQTKFYLGLQLEHLPSGILVHQSA 798
Query: 170 Y 172
Y
Sbjct: 799 Y 799
>gb|ABA98087.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 908
Score = 68.6 bits (166), Expect(3) = 5e-19
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = +1
Query: 301 NFSYLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
+F YLS+I AL+Y A P++ SVNLLARYS+APT RHW G+ N+ Y+ T D+ LF
Sbjct: 683 DFPYLSVIGALMYHANSMRPDIAFSVNLLARYSAAPTNRHWTGVKNVFRYINGTRDLGLF 742
Score = 40.0 bits (92), Expect(3) = 5e-19
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 162 SLHMSKVFREFKKDM-HPASTPMVSRGSNVSK*PIRLKEDDEDV*GDEF 305
S + K+ +F D + + TPMV+R +V K P R KED EDV G +F
Sbjct: 636 SAYTQKILEKFNMDKSYSSKTPMVARSLDVEKDPFRPKEDGEDVLGPDF 684
Score = 31.2 bits (69), Expect(3) = 5e-19
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +2
Query: 5 FVILATYVDVTYMMGALDVVRDPTSYSKSKFEMRHLGKAR--PKIEVAYI---ILFHQFA 169
F I++ YVD ++G + + + K++FEM+ LG+ + +++ ++ IL HQ A
Sbjct: 578 FCIISVYVDDLNIIGNTQDINEARHHLKTEFEMKDLGQTKFYLGLQLEHLPSGILVHQSA 637
Query: 170 Y 172
Y
Sbjct: 638 Y 638
>emb|CAD40421.3| OSJNBa0065J03.17 [Oryza sativa Japonica Group]
Length = 864
Score = 68.2 bits (165), Expect(3) = 8e-19
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +1
Query: 301 NFSYLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
+F YLS I AL+Y A T P++ SVNLLARYS+APT+ HW G+ N+ YL T D+ LF
Sbjct: 622 DFPYLSAIGALMYLANSTRPDIAFSVNLLARYSAAPTKHHWTGVKNVFRYLNGTRDLGLF 681
Score = 39.7 bits (91), Expect(3) = 8e-19
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 162 SLHMSKVFREFKKDM-HPASTPMVSRGSNVSK*PIRLKEDDEDV*GDEF 305
S + K+ +F D +P+ PMV R +V K P R KED EDV G +F
Sbjct: 575 SAYTQKILEKFNMDKSYPSKIPMVVRSLDVEKDPFRPKEDGEDVLGPDF 623
Score = 31.2 bits (69), Expect(3) = 8e-19
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +2
Query: 5 FVILATYVDVTYMMGALDVVRDPTSYSKSKFEMRHLGKAR--PKIEVAYI---ILFHQFA 169
F I++ YVD ++G + + + K++FEM+ LG+ + +++ ++ IL HQ A
Sbjct: 517 FCIISVYVDDLSIIGNTQDINEARHHLKTEFEMKDLGQTKFCLGLQLEHLPSGILVHQSA 576
Query: 170 Y 172
Y
Sbjct: 577 Y 577
>gb|ABF96131.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1275
Score = 65.9 bits (159), Expect(3) = 2e-17
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = +1
Query: 301 NFSYLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
+F YLS I AL+Y A T P + SVNLLARYS+APT+RHW + N+ YL T D+ LF
Sbjct: 1181 DFPYLSAIGALMYLANSTRPYIAFSVNLLARYSAAPTKRHWTRVKNVFRYLNGTRDLGLF 1240
Score = 37.0 bits (84), Expect(3) = 2e-17
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 162 SLHMSKVFREFKKDM-HPASTPMVSRGSNVSK*PIRLKEDDEDV*GDEF 305
S + K+ +F D +P+ TPMV R +V K R KED EDV G +F
Sbjct: 1134 SAYTQKILEKFIMDKSYPSKTPMVVRSLDVEKDLFRPKEDGEDVLGPDF 1182
Score = 31.2 bits (69), Expect(3) = 2e-17
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +2
Query: 5 FVILATYVDVTYMMGALDVVRDPTSYSKSKFEMRHLGKAR--PKIEVAYI---ILFHQFA 169
F I++ YVD ++G + + + K++FEM+ LG+ + +++ ++ IL HQ A
Sbjct: 1076 FCIISVYVDDLNIIGNTQDINEARHHLKTEFEMKDLGQTKFCLGLQLEHLPSGILVHQSA 1135
Query: 170 Y 172
Y
Sbjct: 1136 Y 1136
>emb|CAN61800.1| hypothetical protein VITISV_044293 [Vitis vinifera]
Length = 811
Score = 72.8 bits (177), Expect(2) = 3e-17
Identities = 42/89 (47%), Positives = 53/89 (59%)
Frame = +1
Query: 214 LALPWLVEVQM*VNDQFV*RKMTKMCREMNFSYLSIIDALLYSA*CT*PNVTSSVNLLAR 393
L+ P +V ND F K + YLS I AL+Y A CT P++ SVNLLAR
Sbjct: 683 LSSPMVVRSLDVKNDPFRHCKKNEELLGPEVPYLSAIGALMYLANCTRPDIVFSVNLLAR 742
Query: 394 YSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
YSS T+RHWNGI +I+ YL+ T D+ LF
Sbjct: 743 YSSTSTRRHWNGIKHILHYLRGTIDMSLF 771
Score = 41.2 bits (95), Expect(2) = 3e-17
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Frame = +2
Query: 5 FVILATYVDVTYMMGALDVVRDPTSYSKSKFEMRHLGKAR--PKIEVAYI---ILFHQFA 169
F I+A YVD ++G L+ + T+Y K +FEM+ LGK + +++ Y +L HQ
Sbjct: 607 FAIIAVYVDDLNLVGTLEELTITTNYLKKEFEMKDLGKTKFCLGLQIEYFPNEVLVHQST 666
Query: 170 YV 175
Y+
Sbjct: 667 YI 668
>gb|ABA96113.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 676
Score = 72.0 bits (175), Expect(2) = 6e-17
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +1
Query: 301 NFSYLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
+F YLS I AL+Y A T P++ SVNLLARYS+APT+RHW G+ N+ YLK T D+ LF
Sbjct: 434 DFPYLSAIGALMYLANSTRPDIAFSVNLLARYSAAPTKRHWTGVKNVFRYLKGTRDLGLF 493
Score = 40.8 bits (94), Expect(2) = 6e-17
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 168 HMSKVFREFKKD-MHPASTPMVSRGSNVSK*PIRLKEDDEDV*GDEF 305
+ K+ +F D +P+ TPMV R +V K P R KED EDV G +F
Sbjct: 389 NQKKILEKFNMDESYPSKTPMVVRSLDVEKDPFRPKEDGEDVLGPDF 435
>gb|EMT16342.1| hypothetical protein F775_52438 [Aegilops tauschii]
Length = 2020
Score = 62.0 bits (149), Expect(3) = 8e-17
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = +1
Query: 310 YLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
Y S AL+Y A CT P++ +V+LLARYSS PT+RHW G+ ++ YL+ T D+ LF
Sbjct: 205 YPSAFGALMYLANCTRPDIAFAVSLLARYSSEPTKRHWKGVKDVFRYLQGTKDLGLF 261
Score = 35.8 bits (81), Expect(3) = 8e-17
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +2
Query: 5 FVILATYVDVTYMMGALDVVRDPTSYSKSKFEMRHLGKARPKIEVAYI-----ILFHQFA 169
F I++ YVD ++G + + + +SY S+FEM+ LGK + + + IL HQ A
Sbjct: 97 FCIISVYVDDLNIIGTPEDIEEASSYLMSEFEMKDLGKTKFCLGLQLEHSPDGILVHQSA 156
Query: 170 Y 172
Y
Sbjct: 157 Y 157
Score = 34.3 bits (77), Expect(3) = 8e-17
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 162 SLHMSKVFREFKKDM-HPASTPMVSRGSNVSK*PIRLKEDDEDV*GDE 302
S + KV F D +P+ TPMV R K P R KE+ ED G E
Sbjct: 155 SAYTQKVLERFGFDKAYPSKTPMVGRSLQPDKDPFRPKEEGEDTLGPE 202
>emb|CAE05047.2| OSJNBa0049H08.8 [Oryza sativa Japonica Group]
Length = 810
Score = 67.0 bits (162), Expect(3) = 1e-16
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +1
Query: 301 NFSYLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
+F YLS I AL+Y A T P++ SVNLLARYS+APT+RHW + N+ YL T D+ LF
Sbjct: 725 DFPYLSAIGALMYLANSTRPDIAFSVNLLARYSAAPTKRHWTEVKNVFRYLNGTRDLGLF 784
Score = 38.5 bits (88), Expect(3) = 1e-16
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 162 SLHMSKVFREFKKDM-HPASTPMVSRGSNVSK*PIRLKEDDEDV*GDEF 305
S + K+ +F D +P+ TPMV R +V K P R KE EDV G +F
Sbjct: 678 SAYTQKILEKFNMDKSYPSKTPMVVRSLDVEKDPFRPKEYGEDVLGPDF 726
Score = 26.2 bits (56), Expect(3) = 1e-16
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +2
Query: 5 FVILATYVDVTYMMGALDVVRDPTSYSKSKFEMRHLGKAR--PKIEVAYI---ILFHQFA 169
F ++ YVD ++ + + + K++FEM+ LG+ + +++ ++ IL HQ A
Sbjct: 620 FCFISVYVDDLNIIRNTQDINEACHHLKTEFEMKDLGQTKFCLGLQLDHLPSRILVHQSA 679
Query: 170 Y 172
Y
Sbjct: 680 Y 680
>emb|CAH66646.1| OSIGBa0146I21.3 [Oryza sativa Indica Group]
Length = 684
Score = 67.0 bits (162), Expect(3) = 1e-16
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +1
Query: 301 NFSYLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
+F YLS I AL+Y A T P++ SVNLLARYS+APT+RHW + N+ YL T D+ LF
Sbjct: 599 DFPYLSAIGALMYLANSTRPDIAFSVNLLARYSAAPTKRHWTEVKNVFRYLNGTRDLGLF 658
Score = 38.5 bits (88), Expect(3) = 1e-16
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 162 SLHMSKVFREFKKDM-HPASTPMVSRGSNVSK*PIRLKEDDEDV*GDEF 305
S + K+ +F D +P+ TPMV R +V K P R KE EDV G +F
Sbjct: 552 SAYTQKILEKFNMDKSYPSKTPMVVRSLDVEKDPFRPKEYGEDVLGPDF 600
Score = 26.2 bits (56), Expect(3) = 1e-16
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +2
Query: 5 FVILATYVDVTYMMGALDVVRDPTSYSKSKFEMRHLGKAR--PKIEVAYI---ILFHQFA 169
F ++ YVD ++ + + + K++FEM+ LG+ + +++ ++ IL HQ A
Sbjct: 494 FCFISVYVDDLNIIRNTQDINEACHHLKTEFEMKDLGQTKFCLGLQLDHLPSRILVHQSA 553
Query: 170 Y 172
Y
Sbjct: 554 Y 554
>gb|ABA92033.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1263
Score = 68.9 bits (167), Expect(2) = 2e-16
Identities = 34/60 (56%), Positives = 42/60 (70%)
Frame = +1
Query: 301 NFSYLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
+F YLS I AL+Y T P++ SVNLLARYS+APT+RHW G+ NI YL T D+ LF
Sbjct: 1037 DFPYLSAIGALMYLTNSTRPDIAFSVNLLARYSAAPTKRHWTGVKNIFRYLNGTRDLGLF 1096
Score = 42.0 bits (97), Expect(2) = 2e-16
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 162 SLHMSKVFREFKKDM-HPASTPMVSRGSNVSK*PIRLKEDDEDV*GDEF 305
S + K+ +F D +P+ TPMV R +V K P R KED EDV G +F
Sbjct: 990 SAYTQKILEKFNMDKSYPSKTPMVVRSLDVEKDPFRPKEDGEDVLGPDF 1038
>gb|AEJ07957.1| polyprotein [Sorghum propinquum]
Length = 429
Score = 62.8 bits (151), Expect(3) = 1e-15
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 301 NFSYLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
+F YLS I AL+Y A T P++ +VNLLAR+S+APT+RHW G+ + YL T D+ LF
Sbjct: 190 HFPYLSAIGALMYLANNTRPDIAFAVNLLARHSAAPTKRHWIGVKTVFRYLNGTKDLGLF 249
Score = 38.1 bits (87), Expect(3) = 1e-15
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 147 LYYSTSLHMSKVFREFKKDM-HPASTPMVSRGSNVSK*PIRLKEDDEDV*GDEF 305
++ S ++ K+ +F D +P TPMV R +V K P R +E++E++ G F
Sbjct: 138 IFVYQSTYVQKILEKFNMDKSYPTKTPMVVRSLDVDKDPFRPREENEEILGPHF 191
Score = 27.3 bits (59), Expect(3) = 1e-15
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +2
Query: 5 FVILATYVDVTYMMGALDVVRDPTSYSKSKFEMRHLGKAR 124
F I++ YVD ++G + + + K++FEM+ LG+ +
Sbjct: 85 FCIISVYVDDLNIIGNGSDIDEARHHLKTEFEMKDLGQTK 124
>dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis thaliana]
Length = 1123
Score = 58.5 bits (140), Expect(3) = 1e-15
Identities = 27/53 (50%), Positives = 39/53 (73%)
Frame = +1
Query: 310 YLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFD 468
YLS I AL+Y + T P++ +VNLL+R+SS PT+RHW GI +++ YL+ T D
Sbjct: 913 YLSAIGALMYLSSHTRPDICFAVNLLSRFSSCPTKRHWEGIKHLLRYLQGTID 965
Score = 40.0 bits (92), Expect(3) = 1e-15
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +2
Query: 5 FVILATYVDVTYMMGALDVVRDPTSYSKSKFEMRHLGKAR--PKIEVAYI---ILFHQFA 169
FVI+A YVD ++G + Y K +FEM+ LGK + +++ YI IL HQ A
Sbjct: 805 FVIIAVYVDDLNILGTSGEIAQTVEYLKKEFEMKDLGKTKFCLGLQLEYIDKGILVHQKA 864
Query: 170 Y 172
Y
Sbjct: 865 Y 865
Score = 29.3 bits (64), Expect(3) = 1e-15
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 180 VFREFKKDM-HPASTPMVSRGSNVSK*PIRLKEDDEDV*GDE 302
V + F D HP ++PM R + P K+DDE++ G E
Sbjct: 869 VLKRFNMDKAHPLTSPMQVRSLGLDSDPFGPKKDDEEILGPE 910
>ref|XP_004237326.1| PREDICTED: uncharacterized protein LOC101252478 [Solanum
lycopersicum]
Length = 753
Score = 68.6 bits (166), Expect(3) = 2e-15
Identities = 33/57 (57%), Positives = 43/57 (75%)
Frame = +1
Query: 310 YLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
YLS I AL+Y A T P++ VNLLARYSS+PT+RHWNG+ +I+ YL+ T D+ LF
Sbjct: 657 YLSAIGALMYHANATRPDIAFFVNLLARYSSSPTRRHWNGVKHILRYLRGTSDMGLF 713
Score = 30.4 bits (67), Expect(3) = 2e-15
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Frame = +2
Query: 53 LDVVRDPTSYSKSKFEMRHLGKAR--PKIEVAYI---ILFHQFAY 172
L+ V+ Y K +FEM+ LGK + +++ Y+ + HQFAY
Sbjct: 565 LEEVQKAIEYLKEEFEMKDLGKTKICLGLQIEYLVDGVFIHQFAY 609
Score = 28.5 bits (62), Expect(3) = 2e-15
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 207 HPASTPMVSRGSNVSK*PIRLKEDDEDV*GDE 302
H TPM+ R VSK P R +E++E+ G E
Sbjct: 623 HLLCTPMIVRSLEVSKDPFRPQEENEEPLGPE 654
>gb|AAP50929.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 639
Score = 67.8 bits (164), Expect(2) = 9e-15
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +1
Query: 301 NFSYLSIIDALLYSA*CT*PNVTSSVNLLARYSSAPTQRHWNGIVNIIMYLKVTFDIILF 480
+F YLS I AL+Y A T P++ SV LLARYS+APT+RHW G+ N+ YL T D+ LF
Sbjct: 478 DFPYLSAIGALMYFANSTRPDIAFSVKLLARYSAAPTKRHWTGVKNVFRYLNGTRDLGLF 537
Score = 37.7 bits (86), Expect(2) = 9e-15
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +3
Query: 207 HPASTPMVSRGSNVSK*PIRLKEDDEDV*GDEF 305
+P+ TPMV R +V K P R KED EDV G +F
Sbjct: 447 YPSKTPMVVRSLDVEKDPFRPKEDGEDVLGPDF 479