BLASTX nr result
ID: Papaver25_contig00039280
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00039280
(453 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006833054.1| hypothetical protein AMTR_s00170p00032020 [A... 69 2e-18
ref|XP_006472401.1| PREDICTED: pentatricopeptide repeat-containi... 57 4e-12
ref|XP_002305120.2| hypothetical protein POPTR_0004s04740g [Popu... 58 5e-12
ref|XP_006433760.1| hypothetical protein CICLE_v10000550mg [Citr... 57 6e-12
ref|XP_006364980.1| PREDICTED: pentatricopeptide repeat-containi... 55 8e-12
ref|XP_007214178.1| hypothetical protein PRUPE_ppa019185mg [Prun... 51 1e-11
ref|XP_004238030.1| PREDICTED: pentatricopeptide repeat-containi... 54 3e-11
ref|XP_007225109.1| hypothetical protein PRUPE_ppa002728mg [Prun... 54 5e-11
ref|XP_006662937.1| PREDICTED: pentatricopeptide repeat-containi... 54 8e-11
ref|XP_004982698.1| PREDICTED: pentatricopeptide repeat-containi... 55 1e-10
ref|XP_004982699.1| PREDICTED: pentatricopeptide repeat-containi... 55 1e-10
ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group] g... 55 2e-10
gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indi... 55 2e-10
gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japo... 55 2e-10
ref|XP_004986483.1| PREDICTED: putative pentatricopeptide repeat... 50 2e-10
ref|XP_007025555.1| Tetratricopeptide repeat-like superfamily pr... 55 2e-10
ref|XP_004308608.1| PREDICTED: pentatricopeptide repeat-containi... 50 2e-10
ref|XP_004287415.1| PREDICTED: pentatricopeptide repeat-containi... 54 2e-10
ref|XP_003615371.1| Pentatricopeptide repeat-containing protein ... 54 2e-10
ref|XP_004294643.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-10
>ref|XP_006833054.1| hypothetical protein AMTR_s00170p00032020 [Amborella trichopoda]
gi|548837647|gb|ERM98332.1| hypothetical protein
AMTR_s00170p00032020 [Amborella trichopoda]
Length = 752
Score = 68.9 bits (167), Expect(2) = 2e-18
Identities = 32/70 (45%), Positives = 45/70 (64%)
Frame = -3
Query: 445 GYINKPRVSLYEKKMKGLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLFVQ 266
G+ + Y K+ G+KPD YTFSC+LK CAL +D QG+ + L +G + DLFV
Sbjct: 125 GFHEQALALFYNKRAAGMKPDSYTFSCVLKACALLSDRNQGKVLHDLVRESGLEEDLFVS 184
Query: 265 NSLIAMFGKC 236
NSL++MF +C
Sbjct: 185 NSLLSMFCRC 194
Score = 49.3 bits (116), Expect(2) = 2e-18
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Frame = -2
Query: 173 EAMDKFQQLVGIGFRPNQVTVINALSLCSSAATVKELHGFVSKNGYQS-----NRTVSVY 9
EAM+ Q+++ G++P+ VT+++AL+ C A +E+HG+ +NG+ S N VS+Y
Sbjct: 230 EAMEMLQKMIESGYKPDSVTILSALAGC-PLALGREIHGYAIRNGFHSTFRVRNSLVSMY 288
Query: 8 GK 3
GK
Sbjct: 289 GK 290
>ref|XP_006472401.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Citrus sinensis]
Length = 758
Score = 57.0 bits (136), Expect(2) = 4e-12
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = -3
Query: 424 VSLYEK-KMKGLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLFVQNSLIAM 248
+S++ K G+KPDLYTFS +L +C+ L+QGE I L++ GF SD+ V +L+ M
Sbjct: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
Query: 247 FGKC 236
+ KC
Sbjct: 433 YKKC 436
Score = 39.7 bits (91), Expect(2) = 4e-12
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = -2
Query: 188 HIYDWEAMDKFQQLVGIGFRPNQVTVINALSLCSSAATVKELHGF 54
H +A+ F+ ++ G RPNQVT + AL+ CS+A V E G+
Sbjct: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
>ref|XP_002305120.2| hypothetical protein POPTR_0004s04740g [Populus trichocarpa]
gi|550340337|gb|EEE85631.2| hypothetical protein
POPTR_0004s04740g [Populus trichocarpa]
Length = 858
Score = 57.8 bits (138), Expect(3) = 5e-12
Identities = 26/72 (36%), Positives = 43/72 (59%)
Frame = -3
Query: 451 QTGYINKPRVSLYEKKMKGLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLF 272
Q G+ + ++ YE + G+K + + F +LK C ++ DL G+ + + V GFDSD F
Sbjct: 59 QNGFCQEAVLAFYEMHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEF 118
Query: 271 VQNSLIAMFGKC 236
V NSL+ ++ KC
Sbjct: 119 VANSLVILYAKC 130
Score = 35.8 bits (81), Expect(3) = 5e-12
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Frame = -2
Query: 173 EAMDKFQQLVGIGFRPNQVTVINALSLCSS---AATVKELHGFVSKNGYQS-----NRTV 18
EA+ F +V G RPN+ ++ + +++C+ + +++HG++ K GY S N V
Sbjct: 166 EAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALV 225
Query: 17 SVYGK 3
+Y K
Sbjct: 226 DMYAK 230
Score = 21.9 bits (45), Expect(3) = 5e-12
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -1
Query: 222 KGIVSWNSINPAYI*LGSHG 163
+ +VSWN++ Y+ HG
Sbjct: 146 RSVVSWNALFSCYVHSDMHG 165
Score = 47.4 bits (111), Expect(2) = 2e-08
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = -3
Query: 412 EKKMKGLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLFVQNSLIAMFGKC 236
E + +G+KPD + S LL CA + +QG+ + + GF SD+F NSL+ M+ KC
Sbjct: 476 EMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKC 534
Score = 36.6 bits (83), Expect(2) = 2e-08
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2
Query: 188 HIYDWEAMDKFQQLVGIGFRPNQVTVINALSLCSSAATVKE 66
H Y EA+ F+Q++ +G PN +T+++ L C+ A V E
Sbjct: 565 HGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAE 605
>ref|XP_006433760.1| hypothetical protein CICLE_v10000550mg [Citrus clementina]
gi|557535882|gb|ESR47000.1| hypothetical protein
CICLE_v10000550mg [Citrus clementina]
Length = 647
Score = 57.0 bits (136), Expect(2) = 6e-12
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = -3
Query: 397 GLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLFVQNSLIAMFGKC 236
G+KPDLYTFS +L +C+ L+QGE I L++ GF SD+ V +L+ M+ KC
Sbjct: 272 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYNKC 325
Score = 38.9 bits (89), Expect(2) = 6e-12
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = -2
Query: 188 HIYDWEAMDKFQQLVGIGFRPNQVTVINALSLCSSAATVKELHGF 54
H +A+ F+ ++ G RPNQVT + AL+ CS+A V E G+
Sbjct: 356 HGLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 400
>ref|XP_006364980.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Solanum tuberosum]
Length = 755
Score = 55.5 bits (132), Expect(2) = 8e-12
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = -3
Query: 397 GLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLFVQNSLIAMFGKC 236
G+KPDL+TFS +L +C+ L+QGE I + +GF SD+ V SL++M+ KC
Sbjct: 375 GMKPDLFTFSSVLSICSSLVALEQGEQIHAQVIKSGFLSDVVVGTSLVSMYNKC 428
Score = 40.0 bits (92), Expect(2) = 8e-12
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -2
Query: 188 HIYDWEAMDKFQQLVGIGFRPNQVTVINALSLCSSAATVKE 66
H Y +A+ F+ + +G RPN+VT + LS CS A VKE
Sbjct: 459 HGYSKQALQLFEDMRFVGVRPNKVTFVGVLSACSHAGLVKE 499
>ref|XP_007214178.1| hypothetical protein PRUPE_ppa019185mg [Prunus persica]
gi|462410043|gb|EMJ15377.1| hypothetical protein
PRUPE_ppa019185mg [Prunus persica]
Length = 858
Score = 50.8 bits (120), Expect(3) = 1e-11
Identities = 24/72 (33%), Positives = 42/72 (58%)
Frame = -3
Query: 451 QTGYINKPRVSLYEKKMKGLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLF 272
Q G + + E G+K + +TF +LK C+++ DL G+ + +++ GF+SD F
Sbjct: 59 QNGLGKEALSAFREMHSLGVKCNEFTFPSVLKACSITRDLVVGKQVHGIALLTGFESDEF 118
Query: 271 VQNSLIAMFGKC 236
V N+L+ M+ KC
Sbjct: 119 VANTLVVMYAKC 130
Score = 42.0 bits (97), Expect(3) = 1e-11
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Frame = -2
Query: 173 EAMDKFQQLVGIGFRPNQV---TVINALSLCSSAATVKELHGFVSKNGYQS-----NRTV 18
EAMD FQ+++ G RPN+ ++INA + + +++HG++ K GY+S N V
Sbjct: 166 EAMDLFQEMILSGVRPNEYSLSSIINACTGLGDGSRGRKIHGYMVKLGYESDSFSANALV 225
Query: 17 SVYGK 3
+Y K
Sbjct: 226 DMYAK 230
Score = 21.6 bits (44), Expect(3) = 1e-11
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -1
Query: 222 KGIVSWNSINPAYI*LGSHG 163
+ +VSWN++ Y+ S+G
Sbjct: 146 RNVVSWNALFSCYVQSDSYG 165
>ref|XP_004238030.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Solanum lycopersicum]
Length = 755
Score = 53.5 bits (127), Expect(2) = 3e-11
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -3
Query: 397 GLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLFVQNSLIAMFGKC 236
G+KPDL+TFS +L VC+ L+QGE I + +GF SD+ V +L+ M+ KC
Sbjct: 375 GMKPDLFTFSSVLSVCSSLVALEQGEQIHAQVIKSGFLSDVVVGTALVNMYNKC 428
Score = 40.0 bits (92), Expect(2) = 3e-11
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -2
Query: 188 HIYDWEAMDKFQQLVGIGFRPNQVTVINALSLCSSAATVKE 66
H Y +A+ F+ + +G RPN+VT + LS CS A VKE
Sbjct: 459 HGYSKQALQLFEDMRFVGVRPNKVTFVGVLSACSHAGLVKE 499
>ref|XP_007225109.1| hypothetical protein PRUPE_ppa002728mg [Prunus persica]
gi|462422045|gb|EMJ26308.1| hypothetical protein
PRUPE_ppa002728mg [Prunus persica]
Length = 639
Score = 54.3 bits (129), Expect(2) = 5e-11
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = -3
Query: 397 GLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLFVQNSLIAMFGKC 236
GLKPDL+TFS +L +C+ LQQGE I ++ +GF SD V +L+ M+ KC
Sbjct: 259 GLKPDLFTFSSILTICSGLVALQQGEQIHAQTIKSGFLSDRVVGTALVNMYNKC 312
Score = 38.5 bits (88), Expect(2) = 5e-11
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -2
Query: 173 EAMDKFQQLVGIGFRPNQVTVINALSLCSSAATVKELHGF 54
+A+ F+ + G RPNQVT ++ LS CS A V E GF
Sbjct: 348 QALQLFEDMRIAGVRPNQVTFVSVLSACSQAGMVNEALGF 387
>ref|XP_006662937.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Oryza brachyantha]
Length = 768
Score = 53.9 bits (128), Expect(2) = 8e-11
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = -3
Query: 394 LKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLFVQNSLIAMFGKC 236
+KPDL+TFS +L VC+ L+QGE I ++ GF SD+ V ++L+ M+ KC
Sbjct: 387 MKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKC 439
Score = 38.1 bits (87), Expect(2) = 8e-11
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -2
Query: 173 EAMDKFQQLVGIGFRPNQVTVINALSLCSSAATVKELHGF--VSKNGYQSNRTVSVYG 6
EA+ F+ + G RPN++T ++ LS CS A V+E + + K Y V YG
Sbjct: 475 EAIQLFEDMRSAGVRPNEITFVSVLSACSYAGLVEEAESYFDMMKKEYCIEPVVDHYG 532
>ref|XP_004982698.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like isoform X1 [Setaria italica]
Length = 772
Score = 55.5 bits (132), Expect(2) = 1e-10
Identities = 25/57 (43%), Positives = 37/57 (64%)
Frame = -3
Query: 406 KMKGLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLFVQNSLIAMFGKC 236
K +KPDL+TFS +L VC+ L+QGE I ++ GF SD+ V ++L+ M+ KC
Sbjct: 387 KRSSMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKC 443
Score = 36.2 bits (82), Expect(2) = 1e-10
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -2
Query: 173 EAMDKFQQLVGIGFRPNQVTVINALSLCSSAATVKELHGF--VSKNGYQSNRTVSVYG 6
EA+ F+ + G +PN++T ++ LS CS A V+E + + K Y+ V YG
Sbjct: 479 EAIQLFEDMRLAGVKPNEITFVSVLSACSYAGLVEEAERYFNMMKEEYKIEPVVDHYG 536
>ref|XP_004982699.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like isoform X2 [Setaria italica]
gi|514815904|ref|XP_004982700.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g27610-like isoform X3 [Setaria italica]
gi|514815906|ref|XP_004982701.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g27610-like isoform X4 [Setaria italica]
Length = 766
Score = 55.5 bits (132), Expect(2) = 1e-10
Identities = 25/57 (43%), Positives = 37/57 (64%)
Frame = -3
Query: 406 KMKGLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLFVQNSLIAMFGKC 236
K +KPDL+TFS +L VC+ L+QGE I ++ GF SD+ V ++L+ M+ KC
Sbjct: 387 KRSSMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKC 443
Score = 36.2 bits (82), Expect(2) = 1e-10
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -2
Query: 173 EAMDKFQQLVGIGFRPNQVTVINALSLCSSAATVKELHGF--VSKNGYQSNRTVSVYG 6
EA+ F+ + G +PN++T ++ LS CS A V+E + + K Y+ V YG
Sbjct: 479 EAIQLFEDMRLAGVKPNEITFVSVLSACSYAGLVEEAERYFNMMKEEYKIEPVVDHYG 536
>ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative,
expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa
Japonica Group]
Length = 770
Score = 54.7 bits (130), Expect(2) = 2e-10
Identities = 25/57 (43%), Positives = 38/57 (66%)
Frame = -3
Query: 406 KMKGLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLFVQNSLIAMFGKC 236
K +KPDL+TFS +L VC+ L+QGE I ++ +GF SD+ V ++L+ M+ KC
Sbjct: 385 KRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKC 441
Score = 36.2 bits (82), Expect(2) = 2e-10
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -2
Query: 173 EAMDKFQQLVGIGFRPNQVTVINALSLCSSAATVKELHGF--VSKNGYQSNRTVSVYG 6
EA+ F+++ G RPN++T ++ LS CS A V+E + + K Y V YG
Sbjct: 477 EAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYG 534
>gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 54.7 bits (130), Expect(2) = 2e-10
Identities = 25/57 (43%), Positives = 38/57 (66%)
Frame = -3
Query: 406 KMKGLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLFVQNSLIAMFGKC 236
K +KPDL+TFS +L VC+ L+QGE I ++ +GF SD+ V ++L+ M+ KC
Sbjct: 385 KRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKC 441
Score = 36.2 bits (82), Expect(2) = 2e-10
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -2
Query: 173 EAMDKFQQLVGIGFRPNQVTVINALSLCSSAATVKELHGF--VSKNGYQSNRTVSVYG 6
EA+ F+++ G RPN++T ++ LS CS A V+E + + K Y V YG
Sbjct: 477 EAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYG 534
>gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 54.7 bits (130), Expect(2) = 2e-10
Identities = 25/57 (43%), Positives = 38/57 (66%)
Frame = -3
Query: 406 KMKGLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLFVQNSLIAMFGKC 236
K +KPDL+TFS +L VC+ L+QGE I ++ +GF SD+ V ++L+ M+ KC
Sbjct: 345 KRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKC 401
Score = 36.2 bits (82), Expect(2) = 2e-10
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -2
Query: 173 EAMDKFQQLVGIGFRPNQVTVINALSLCSSAATVKELHGF--VSKNGYQSNRTVSVYG 6
EA+ F+++ G RPN++T ++ LS CS A V+E + + K Y V YG
Sbjct: 437 EAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYG 494
>ref|XP_004986483.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Setaria italica]
Length = 697
Score = 49.7 bits (117), Expect(2) = 2e-10
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Frame = -3
Query: 445 GYINKPRV-----SLYEKKMKGLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDS 281
GYI RV + E + +G++P+ +TFS ++K CA+ A L+QG + +
Sbjct: 299 GYIETDRVDEALETYTELRRQGIEPNEFTFSSMIKGCAMQALLEQGTQLHAQVIKTSLID 358
Query: 280 DLFVQNSLIAMFGKC 236
D FV ++L+ M+GKC
Sbjct: 359 DSFVGSTLVDMYGKC 373
Score = 41.2 bits (95), Expect(2) = 2e-10
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Frame = -2
Query: 188 HIYDWEAMDKFQQLVGIGFRPNQVTVINALSLCSSAATV----------KELHGFVSKNG 39
H + WEA+ F ++ G RPN +T ++ L+ CS A V K+ HG K
Sbjct: 404 HGHGWEAIQAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDKHGIEPKEE 463
Query: 38 YQSNRTVSVYGK 3
+ S + +YG+
Sbjct: 464 HYS-CIIDMYGR 474
>ref|XP_007025555.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508780921|gb|EOY28177.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 946
Score = 54.7 bits (130), Expect(2) = 2e-10
Identities = 25/72 (34%), Positives = 42/72 (58%)
Frame = -3
Query: 451 QTGYINKPRVSLYEKKMKGLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLF 272
Q G+ + ++ YE + G++ + +TF +LK C + DL+ G I + V GF+ D +
Sbjct: 147 QNGFGKEAILAFYEMHLLGVRCNDFTFPSVLKACTFTRDLELGRQIHAVVVVTGFECDEY 206
Query: 271 VQNSLIAMFGKC 236
V NSL+ M+ KC
Sbjct: 207 VANSLVVMYAKC 218
Score = 35.8 bits (81), Expect(2) = 2e-10
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = -2
Query: 182 YDWEAMDKFQQLVGIGFRPNQVTV---INALSLCSSAATVKELHGFVSKNGYQSN 27
Y EA++ F ++V G +PN+ ++ INA + + ++ HGF+ K GY S+
Sbjct: 251 YCGEAVELFHEMVSSGIKPNEFSLSSMINAYTGLEDSGQGRKTHGFLIKLGYDSD 305
Score = 45.4 bits (106), Expect(2) = 5e-07
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = -3
Query: 400 KGLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLFVQNSLIAMFGKCE*MHE 221
+G++PD + S LL CA + +QG+ + + GF SD+F NSL+ M+ KC + +
Sbjct: 568 RGIEPDPFVGSSLLNACANLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIDD 627
Query: 220 RDSV 209
D V
Sbjct: 628 ADRV 631
Score = 33.9 bits (76), Expect(2) = 5e-07
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -2
Query: 188 HIYDWEAMDKFQQLVGIGFRPNQVTVINALSLCSSAATVKE 66
H + EA+ F Q++ G PNQ+T+++ L C+ A + E
Sbjct: 653 HGHGKEALRVFNQMLKYGVSPNQITLVSVLCACNHAGLITE 693
>ref|XP_004308608.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Fragaria vesca subsp. vesca]
Length = 861
Score = 50.4 bits (119), Expect(2) = 2e-10
Identities = 25/72 (34%), Positives = 40/72 (55%)
Frame = -3
Query: 451 QTGYINKPRVSLYEKKMKGLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLF 272
Q G + + +E G+K + +TF +LK C+ S DL+ G + + GF+SD F
Sbjct: 62 QNGLSREALSAFHEMHGLGVKSNEFTFPSVLKACSSSKDLRLGMQVHGVVYVTGFESDEF 121
Query: 271 VQNSLIAMFGKC 236
V N+L+ M+ KC
Sbjct: 122 VANALVVMYSKC 133
Score = 40.0 bits (92), Expect(2) = 2e-10
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Frame = -2
Query: 173 EAMDKFQQLVGIGFRPNQVTVINALSLCS---SAATVKELHGFVSKNGYQS-----NRTV 18
EAMD F+++V G RP++ ++ + +++C+ ++LHG+V K GY S N V
Sbjct: 169 EAMDLFEEMVLSGVRPDEYSLSSIINVCTGLGDGRRGRKLHGYVVKLGYDSDLFSANALV 228
Query: 17 SVYGK 3
+Y K
Sbjct: 229 DMYAK 233
Score = 47.0 bits (110), Expect(2) = 1e-08
Identities = 24/70 (34%), Positives = 39/70 (55%)
Frame = -3
Query: 412 EKKMKGLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLFVQNSLIAMFGKCE 233
E + G++PD Y+ S ++ VC D ++G + V G+DSDLF N+L+ M+ K
Sbjct: 176 EMVLSGVRPDEYSLSSIINVCTGLGDGRRGRKLHGYVVKLGYDSDLFSANALVDMYAKAI 235
Query: 232 *MHERDSVME 203
+ + SV E
Sbjct: 236 CLEDAVSVFE 245
Score = 37.7 bits (86), Expect(2) = 1e-08
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = -2
Query: 191 LHIYDWEAMDKFQQLVGIGFRPNQVTVINALSLCSSAATVK---ELHGFVSKNGYQSNRT 21
LH A+ F+QL G G RPN T+ +AL C+ + K +LH F+ K +S+
Sbjct: 264 LHNCHGRALKFFRQLGGSGIRPNMFTLSSALKACAGLSFEKLGRQLHSFLVKMDTESDSY 323
Query: 20 VSV 12
V V
Sbjct: 324 VKV 326
>ref|XP_004287415.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Fragaria vesca subsp. vesca]
Length = 765
Score = 53.9 bits (128), Expect(2) = 2e-10
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = -3
Query: 397 GLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLFVQNSLIAMFGKC 236
G+KPDL+T+S +L +C+ L QGE + S+ +GF SD+ V +L+ M+ KC
Sbjct: 384 GVKPDLFTYSSILTICSSLVALDQGEQVHAQSIKSGFVSDIVVATALVNMYNKC 437
Score = 36.6 bits (83), Expect(2) = 2e-10
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -2
Query: 173 EAMDKFQQLVGIGFRPNQVTVINALSLCSSAATVKELHGF 54
+A+ F+ + G RPNQVT ++ LS CS A V E G+
Sbjct: 473 QALQLFEDMRIAGVRPNQVTFVSVLSACSYAGMVNEALGY 512
>ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355516706|gb|AES98329.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 765
Score = 53.9 bits (128), Expect(2) = 2e-10
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 11/79 (13%)
Frame = -3
Query: 439 INKPRVSLYEKKMK-----------GLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*N 293
++K +S Y+K ++ G+KPD +TFS +L VC+ L+QGE I ++
Sbjct: 361 LSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKT 420
Query: 292 GFDSDLFVQNSLIAMFGKC 236
GF SD+ V +S+I M+ KC
Sbjct: 421 GFLSDVVVGSSMINMYNKC 439
Score = 36.6 bits (83), Expect(2) = 2e-10
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2
Query: 188 HIYDWEAMDKFQQLVGIGFRPNQVTVINALSLCSSAATVKELHGF 54
H + +A++ F+ + +G RPN VT + LS C SA V E +
Sbjct: 470 HGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNY 514
>ref|XP_004294643.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 870
Score = 57.0 bits (136), Expect(3) = 3e-10
Identities = 29/68 (42%), Positives = 42/68 (61%)
Frame = -3
Query: 412 EKKMKGLKPDLYTFSCLLKVCALSADLQQGENIWKLSV*NGFDSDLFVQNSLIAMFGKCE 233
E + G+ PD+YT + +L CA S L++G++I K + DS LFV NSL+ M+ KC
Sbjct: 388 EMETDGVIPDVYTITSILHACACSGSLEKGKDIHKYIREHDMDSSLFVCNSLMDMYAKCG 447
Query: 232 *MHERDSV 209
M + DSV
Sbjct: 448 SMEDADSV 455
Score = 32.0 bits (71), Expect(3) = 3e-10
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 8/65 (12%)
Frame = -2
Query: 173 EAMDKFQQLVGIGFRPNQVTVINALSLCSSAATV---KELHGFVSKNG-----YQSNRTV 18
EA++ F + F+P+ +T+ + L C+S A + +E+HG++ ++G Y +N V
Sbjct: 482 EALELFSDMQR-KFKPDSMTLASVLPACASLAALDRGQEIHGYLLRHGYFLDQYVANALV 540
Query: 17 SVYGK 3
+Y K
Sbjct: 541 DMYVK 545
Score = 20.8 bits (42), Expect(3) = 3e-10
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 225 MKGIVSWNSINPAY 184
MK IVSWN++ Y
Sbjct: 461 MKDIVSWNTMIGGY 474