BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00039256
         (548 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004304923.1| PREDICTED: putative ribonuclease H protein A...    66   6e-09
ref|XP_004308354.1| PREDICTED: putative ribonuclease H protein A...    61   2e-07
ref|XP_004289281.1| PREDICTED: putative ribonuclease H protein A...    61   2e-07
gb|AGV40503.1| hypothetical protein [Phaseolus vulgaris]               60   3e-07
ref|XP_004305144.1| PREDICTED: putative ribonuclease H protein A...    60   3e-07
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    60   3e-07
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    60   3e-07
gb|ABN08796.1| Ribonuclease H [Medicago truncatula]                    60   3e-07
ref|XP_007213453.1| hypothetical protein PRUPE_ppa024777mg, part...    59   6e-07
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A...    56   7e-06
ref|XP_004253435.1| PREDICTED: putative ribonuclease H protein A...    55   9e-06
ref|XP_004253276.1| PREDICTED: putative ribonuclease H protein A...    55   9e-06
ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein A...    55   9e-06
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A...    55   9e-06

>ref|XP_004304923.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 209

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
 Frame = -2

Query: 394 GLVVRDVNAQVVGAMSVGFGVQTNFLAEVFCVIVGLEWATKFGIQNICIRSDSMSAVMVF 215
           G V RD +   +G+     G +T+F +E++ VI+ +E A   G   + + SDS+S V  F
Sbjct: 70  GGVFRDASGGFLGSFCQSLGWKTSFYSELYAVILAIEIAHDKGWVYLWLESDSVSVVACF 129

Query: 214 SGDISNVPWFLRPRWVAVRA--RYTNIRFIHSYREVNFAADCMAKRGCLLEEGEGISYDN 41
           S    + PW LR RW    +  R  N R  H +RE N  AD MA  G  L       YDN
Sbjct: 130 SSKSFSPPWNLRVRWNNCLSIIRQMNFRCSHIFREGNMVADKMANLG--LSNASFTWYDN 187

Query: 40  RP 35
            P
Sbjct: 188 PP 189


>ref|XP_004308354.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 235

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
 Frame = -2

Query: 394 GLVVRDVNAQVVGAMSVGFGVQTNFLAEVFCVIVGLEWATKFGIQNICIRSDSMSAVMVF 215
           G V RD +   +G+     G +T+F +E++ VI+ +E A   G   + + SDS+S V  F
Sbjct: 96  GGVFRDASGGFLGSFCHSLGWKTSFYSELYVVILAIEIAHDKGWVYLWLESDSVSVVACF 155

Query: 214 SGDISNVPWFLRPRW--VAVRARYTNIRFIHSYREVNFAADCMAKRG 80
           S    +  W LR RW    +  R  N R+ H +RE N  AD MA  G
Sbjct: 156 SSRSFSPTWNLRVRWNNCLLIIRQMNFRYSHIFREGNIVADKMANLG 202


>ref|XP_004289281.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 215

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
 Frame = -2

Query: 394 GLVVRDVNAQVVGAMSVGFGVQTNFLAEVFCVIVGLEWATKFGIQNICIRSDSMSAVMVF 215
           G V RD     +G  S   G   +F +E+  VI+G+E A + G Q++ +  DS S V  F
Sbjct: 76  GGVFRDYQGHFIGGFSTPIGHHNDFFSELLAVIIGIELAFQLGWQHVWLECDSTSVVECF 135

Query: 214 SGDISNVPWFLRPRWVAVRARYTNIRFI--HSYREVNFAADCMAKRG 80
           S      PW LR  W    AR  ++ F   H  RE N  AD +   G
Sbjct: 136 SKSSFVPPWQLRTLWYNCVARTRSMSFFCSHVLREGNIVADRLVNLG 182


>gb|AGV40503.1| hypothetical protein [Phaseolus vulgaris]
          Length = 234

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 2/129 (1%)
 Frame = -2

Query: 394 GLVVRDVNAQVVGAMSVGFGVQTNFLAEVFCVIVGLEWATKFGIQNICIRSDSMSAVMVF 215
           G + R    + +GA S    VQT  +AE + VI  +E A K G+ N+ +  DS      F
Sbjct: 95  GGIFRGSMGEFIGAFSAFLEVQTALVAEFYGVIHAMEEAQKMGLTNVWLECDSALVCAAF 154

Query: 214 SGDISNVPWFLRPRWVAVRARYTNIRF--IHSYREVNFAADCMAKRGCLLEEGEGISYDN 41
           +   +NVPW L+ RW         IRF   H +RE N  AD +A  G +    E   + N
Sbjct: 155 TAR-TNVPWMLQNRWNTCLNFCGTIRFRVTHIFREGNACADKLANLGFI--HRESFHWYN 211

Query: 40  RPDFILSIE 14
           R   IL +E
Sbjct: 212 RLPAILFLE 220


>ref|XP_004305144.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 183

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 37/107 (34%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
 Frame = -2

Query: 394 GLVVRDVNAQVVGAMSVGFGVQTNFLAEVFCVIVGLEWATKFGIQNICIRSDSMSAVMVF 215
           G V RD     +G  S   G    F +E+  VI+G+E   + G Q++ +  DS S V  F
Sbjct: 44  GGVFRDYQGHFIGGFSTPIGHHNAFFSELLAVIIGIELTFQLGWQHVWLECDSTSVVECF 103

Query: 214 SGDISNVPWFLRPRWVAVRARYTNIRFI--HSYREVNFAADCMAKRG 80
           S      PW LR  W    AR  ++ F   H  RE N  AD +A  G
Sbjct: 104 SKSSFVPPWQLRTLWYNCAARIRSMSFFCSHVLREGNTVADRLANLG 150


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
 Frame = -2

Query: 430 KMQCSGSRKF-----ILGLVVRDVNAQVVGAMSVGFGVQTNFLAEVFCVIVGLEWATKFG 266
           K+ C GS         +G+V+RD N   +GA+S   G  T   AE    ++ +E A +  
Sbjct: 225 KINCDGSSVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQ 284

Query: 265 IQNICIRSDSMSAVMVFSGDISNVPWFLRPRWVAVRARYTNI--RFIHSYREVNFAADCM 92
           + ++C+ +DS+  V  F+  +  VPW +R RW        +I    +H  RE N  AD +
Sbjct: 285 LMHVCLETDSLKVVNAFNKGL-GVPWQMRARWQNCWDFCDSISCSCVHILREGNMVADAL 343

Query: 91  AKRG 80
           AK G
Sbjct: 344 AKHG 347


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 38/105 (36%), Positives = 52/105 (49%)
 Frame = -2

Query: 394  GLVVRDVNAQVVGAMSVGFGVQTNFLAEVFCVIVGLEWATKFGIQNICIRSDSMSAVMVF 215
            G + RD +   +GA S   G+ + F AE    I+ LE A   G +N+ + SDS SA+M+F
Sbjct: 1039 GGLFRDSSGSFLGAFSCNIGLASVFHAETLAFILALEHAAHHGWRNLWLESDSTSALMIF 1098

Query: 214  SGDISNVPWFLRPRWVAVRARYTNIRFIHSYREVNFAADCMAKRG 80
            S   S V W LR RW   +     +   H   E N  AD +A  G
Sbjct: 1099 SNS-SLVQWLLRNRWHNAQRLGIQVISSHILHEGNRCADNLANMG 1142


>gb|ABN08796.1| Ribonuclease H [Medicago truncatula]
          Length = 221

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
 Frame = -2

Query: 430 KMQCSGSRKF-----ILGLVVRDVNAQVVGAMSVGFGVQTNFLAEVFCVIVGLEWATKFG 266
           K+ C GS         +G+V+RD N   +GA+S   G  T   AE    ++ +E A +  
Sbjct: 62  KINCDGSSVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQ 121

Query: 265 IQNICIRSDSMSAVMVFSGDISNVPWFLRPRWVAVRARYTNI--RFIHSYREVNFAADCM 92
           + ++C+ +DS+  V  F+  +  VPW +R RW        +I    +H  RE N  AD +
Sbjct: 122 LMHVCLETDSLKVVNAFNKGL-GVPWQMRARWQNCWDFCDSISCSCVHILREGNMVADAL 180

Query: 91  AKRG 80
           AK G
Sbjct: 181 AKHG 184


>ref|XP_007213453.1| hypothetical protein PRUPE_ppa024777mg, partial [Prunus persica]
           gi|462409318|gb|EMJ14652.1| hypothetical protein
           PRUPE_ppa024777mg, partial [Prunus persica]
          Length = 465

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
 Frame = -2

Query: 394 GLVVRDVNAQVVGAMSVGFGVQTNFLAEVFCVIVGLEWATKFGIQNICIRSDSMSAVMVF 215
           G V R+    V+GA S    V +   AEV  VI  +E A      NI I +DS+     F
Sbjct: 332 GGVFRNYQGHVLGAFSANLDVPSGVHAEVLAVIKAIELAWLHAWHNIWIETDSLLVTKFF 391

Query: 214 SGDISNVPWFLRPRW--VAVRARYTNIRFIHSYREVNFAADCMAKRGCLLEEGEGIS-YD 44
                 VPW LR  W    +R ++ + +  H +RE N   D +A  G L   G G++ +D
Sbjct: 392 RSP-HLVPWRLRVDWQNCLLRLQHMSFKISHIFREGNHDVDALANHGAL---GSGLTWWD 447

Query: 43  NRPDFILSI 17
             P FI ++
Sbjct: 448 TAPSFIFAL 456


>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 468

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
 Frame = -2

Query: 394 GLVVRDVNAQVVGAMSVGFGVQTNFLAEVFCVIVGLEWATKFGIQNICIRSDSMSAVMVF 215
           G ++RD   +++ A S   G  +N  AE+   + GL WA + G +NI +  DS   V   
Sbjct: 317 GGIIRDKEGKMIMAFSTPLGEGSNNQAEIEAALFGLTWAFELGFKNILLELDSQLVVQWI 376

Query: 214 SGDISNVPWFLR---PRWVAVRARYTNIRFIHSYREVNFAADCMAK 86
           S  I+  PW L     R   +  +  N R  H +RE N+ AD ++K
Sbjct: 377 SNKIA-PPWNLTNQLERLQQIIIQTQNFRCCHIFREANWVADALSK 421


>ref|XP_004253435.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 174

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
 Frame = -2

Query: 394 GLVVRDVNAQVVGAMSVGFGVQTNFLAEVFCVIVGLEWATKFGIQNICIRSDSMSAVMVF 215
           G ++RD   +++ A S+ FG  TN +AE+     GLEW  + G + I +  DS   +  +
Sbjct: 23  GGILRDHTGKIIFAFSIPFGYGTNNMAELKAASYGLEWCQQHGYKRIALEVDS-ELLCNW 81

Query: 214 SGDISNVPWFLRP---RWVAVRARYTNIRFIHSYREVNFAADCMAK 86
             +I N PW   P   + + ++++       H +RE N  AD +AK
Sbjct: 82  INNIINTPWRCYPTIQQILQIKSKLEYFHCNHIFREANCTADLLAK 127


>ref|XP_004253276.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 174

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
 Frame = -2

Query: 394 GLVVRDVNAQVVGAMSVGFGVQTNFLAEVFCVIVGLEWATKFGIQNICIRSDSMSAVMVF 215
           G ++RD   +++ A S+ FG  TN +AE+     GLEW  + G + I +  DS   +  +
Sbjct: 23  GGILRDHTGKIIFAFSIPFGYGTNNMAELKAASYGLEWCQQHGYKRIALEVDS-ELLCNW 81

Query: 214 SGDISNVPWFLRP---RWVAVRARYTNIRFIHSYREVNFAADCMAK 86
             +I N PW   P   + + ++++       H +RE N  AD +AK
Sbjct: 82  INNIINTPWRCYPTIQQILQIKSKLEYFHCKHIFREANCTADLLAK 127


>ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 213

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
 Frame = -2

Query: 394 GLVVRDVNAQVVGAMSVGFGVQTNFLAEVFCVIVGLEWATKFGIQNICIRSDSMSAVMVF 215
           G ++RD   +++ A S   G  +N  AE+   + GL WA + G +NI +  DS   V   
Sbjct: 62  GGIIRDKEGKMIMAFSTPLGEGSNNQAEIEAALFGLTWAFELGFKNILLELDSQLVVQWI 121

Query: 214 SGDISNVPWFLR---PRWVAVRARYTNIRFIHSYREVNFAADCMAK 86
           S  I+  PW L     R   +  +  N R  H +RE N+ AD ++K
Sbjct: 122 SNKIA-PPWNLTNQLERLQQIIIQTQNFRCSHIFREANWVADALSK 166


>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 1010

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
 Frame = -2

Query: 394  GLVVRDVNAQVVGAMSVGFGVQTNFLAEVFCVIVGLEWATKFGIQNICIRSDSMSAVMVF 215
            G ++RD N +++ A ++ FG+ TN  AE+   + GL W  + G + I +  DS       
Sbjct: 859  GGILRDHNGKLIYAFAIPFGIGTNNFAEMKAALYGLSWCEQHGYKRIILEVDSELLSKWI 918

Query: 214  SGDISNVPWFLRPRWVAVRARYTNIRFI---HSYREVNFAADCMAK 86
               I N+PW  +P    ++     + +    H +RE N  AD +AK
Sbjct: 919  DNSI-NIPWRCQPTIYQIQDIVNKMEYFQCQHIFREANGTADLLAK 963