BLASTX nr result

ID: Papaver25_contig00038758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00038758
         (527 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004302221.1| PREDICTED: E3 ubiquitin-protein ligase RKP-l...    47   4e-06

>ref|XP_004302221.1| PREDICTED: E3 ubiquitin-protein ligase RKP-like [Fragaria vesca
            subsp. vesca]
          Length = 1275

 Score = 46.6 bits (109), Expect(2) = 4e-06
 Identities = 29/54 (53%), Positives = 34/54 (62%)
 Frame = +1

Query: 133  RQAMAYFI*MYLLGHFVATLINHPRISSTDLRGLLLQSFLVFVIQYKDYLVASE 294
            +Q +A FI       FV T  N PRISS DLR LLLQS  V ++QYK+YL A E
Sbjct: 897  KQGLASFI------TFVVTHFNDPRISSADLRDLLLQSISV-LVQYKEYLAAFE 943



 Score = 29.6 bits (65), Expect(2) = 4e-06
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 353  ILVRLCKGLGFALSRFRIYDSYFPIVYQKI 442
            IL+RLCKG GF  S+     S   I++QK+
Sbjct: 971  ILLRLCKGSGFGSSKHGESSSSSSIIFQKL 1000


Top