BLASTX nr result

ID: Papaver25_contig00038591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00038591
         (597 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001497150.1| coat protein [Black raspberry virus F] gi|15...    72   2e-10

>ref|YP_001497150.1| coat protein [Black raspberry virus F] gi|156186255|gb|ABU55398.1|
            coat protein [Black raspberry virus F]
          Length = 769

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 1/175 (0%)
 Frame = -2

Query: 557  FPYKTPFELKGKLDPADGKAHRNHWSVEWHKAWEVAHLYNLGGYSLLYTDDNGVAGPRSF 378
            FP    F LKGK+D   G   R  +     +AW VA+LY L GY L ++    + G   F
Sbjct: 584  FPDVNIFTLKGKIDGTTGDCTRWGFKTTAMRAWYVANLYRLCGYDLDFSSAQNLVGGEKF 643

Query: 377  ISPPGTHFTWPVVRKPDFQDRKAHISGRTEPAKAIFQIVDVATMFF-GKVMDYETKVLEX 201
             +P    F WP++ +P+ Q  +  I+ + +       +  +   FF  K +++  +++  
Sbjct: 644  YAPNNVGFVWPILYEPNHQHDEIVINYQQQRMHHFITLPQIINNFFKNKTIEFSHRIIRR 703

Query: 200  XXXXXXXXXXVPIADYGTAYILSLETSGEIKVAPGVGRLRGYIKRLKDSFEFTDD 36
                      + + +      +    +     +  V RLR YI R ++ F F D+
Sbjct: 704  GTTTSAYGNWLDVVESSGVVQMFANMTVAYNTSAAVSRLRAYITRSEEGFRFVDN 758


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