BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00038133
         (553 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261...    81   2e-13
ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein A...    77   2e-12
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258...    77   2e-12
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A...    75   1e-11
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    75   1e-11
ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein A...    75   1e-11
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A...    75   1e-11
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601...    74   2e-11
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A...    74   2e-11
ref|XP_004248867.1| PREDICTED: putative ribonuclease H protein A...    74   3e-11
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...    74   3e-11
ref|XP_006408500.1| hypothetical protein EUTSA_v10021278mg [Eutr...    72   7e-11
gb|AFW61655.1| putative rnase H family protein [Zea mays]              72   7e-11
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A...    72   9e-11
ref|XP_006659888.1| PREDICTED: uncharacterized protein LOC102712...    71   2e-10
ref|XP_007031374.1| Polynucleotidyl transferase, ribonuclease H-...    71   2e-10
ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein A...    71   2e-10
ref|XP_004234854.1| PREDICTED: putative ribonuclease H protein A...    71   2e-10
gb|ACG35788.1| retrotransposon protein Ty3-gypsy subclass [Zea m...    71   2e-10
ref|NP_001141955.1| putative rnase H family protein [Zea mays] g...    71   2e-10

>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
            lycopersicum]
          Length = 1246

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
 Frame = +1

Query: 19   KMHEVVECFWSPPEDGELLLCCDGAVRGNPGRAGAGVVARDSCSAVLGAISLGLGITANY 198
            + +++V   W+ P  G   L  DG+   N G+ G G + RD    ++ A SL  G   N 
Sbjct: 1075 QQYKIVLVSWNKPGLGTYKLNTDGSALQNSGKIGGGGILRDHQGKIVYAFSLPFGFGTNN 1134

Query: 199  LAEVYAILIGLEWAMKLGFRRVKIRTDS-AAARWAFSQDTIPWFASARWGEIK---RKYD 366
            +AE+ A L GLEW  + G++RV++  DS     W  ++  IPW       +IK   RK +
Sbjct: 1135 IAEIKAALYGLEWCDQHGYKRVELEVDSQLLCNWIKNKTNIPWIYEDLIQQIKQITRKIE 1194

Query: 367  LIILEHSFRECNFVADTMDKRGRDLD 444
                 H +RE N  AD + K    L+
Sbjct: 1195 QFQCHHIYREANITADLLSKWSHSLE 1220


>ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 213

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
 Frame = +1

Query: 28  EVVECFWSPPEDGELLLCCDGAVRGNPGRAGAGVVARDSCSAVLGAISLGLGITANYLAE 207
           EV +  W  P D  + +  DG+   N G+ GAG + RD    ++ A S  LG  +N  AE
Sbjct: 30  EVYKVAWFKPPDQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGEGSNNQAE 89

Query: 208 VYAILIGLEWAMKLGFRRVKIRTDS-AAARWAFSQDTIPWFASARWGEIKRKYDLII--- 375
           + A L GL WA +LGF+ + +  DS    +W  ++   PW  +    +++R   +II   
Sbjct: 90  IEAALFGLTWAFELGFKNILLELDSQLVVQWISNKIAPPWNLT---NQLERLQQIIIQTQ 146

Query: 376 ---LEHSFRECNFVADTMDKRGRD 438
                H FRE N+VAD + K   +
Sbjct: 147 NFRCSHIFREANWVADALSKHSHN 170


>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
            lycopersicum]
          Length = 1454

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
 Frame = +1

Query: 46   WSPPEDGELLLCCDGAVRGNPGRAGAGVVARDSCSAVLGAISLGLGITANYLAEVYAILI 225
            W+ P+ G+  L  DG+   N G+ G G + RD+   ++ A SL  G   N  AE+ A L 
Sbjct: 1277 WNKPDLGKYKLNTDGSALQNSGKIGGGGILRDNQGKIIYAFSLPFGFGTNNFAEIKAALH 1336

Query: 226  GLEWAMKLGFRRVKIRTDS-AAARWAFSQDTIPWFAS---ARWGEIKRKYDLIILEHSFR 393
            GL+W  + G++++++  DS     W  S   IPW       +  +I RK D     H +R
Sbjct: 1337 GLDWCEQHGYKKIELEVDSKLLCNWINSNINIPWRYEELIQQIHQIIRKMDQFQCHHIYR 1396

Query: 394  ECNFVADTMDKRGRDLD 444
            E N  AD + K   +L+
Sbjct: 1397 EANCTADLLSKWSHNLE 1413


>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 468

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
 Frame = +1

Query: 28  EVVECFWSPPEDGELLLCCDGAVRGNPGRAGAGVVARDSCSAVLGAISLGLGITANYLAE 207
           +V +  W  P D  + +  DG+   N G+ GAG + RD    ++ A S  LG  +N  AE
Sbjct: 285 KVYKVTWFKPPDQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGEGSNNQAE 344

Query: 208 VYAILIGLEWAMKLGFRRVKIRTDS-AAARWAFSQDTIPWFASARWGEIKRKYDLIILE- 381
           + A L GL WA +LGF+ + +  DS    +W  ++   PW  +    +++R   +II   
Sbjct: 345 IEAALFGLTWAFELGFKNILLELDSQLVVQWISNKIAPPWNLT---NQLERLQQIIIQTQ 401

Query: 382 -----HSFRECNFVADTMDKRGRD 438
                H FRE N+VAD + K   +
Sbjct: 402 NFRCCHIFREANWVADALSKHSHN 425


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
 Frame = +1

Query: 4    RHRRVKMHEVVECFWSPPEDGELLLCCDGAVRGNPGRAGAGVVARDSCSAVLGAISLGLG 183
            RHR+ K  +++   W  P    L +  DG+V G  G A  G + RDS  + LGA S  +G
Sbjct: 1003 RHRKYK--DIILVLWKNPSPPLLKVNTDGSVVG--GLAACGGLFRDSSGSFLGAFSCNIG 1058

Query: 184  ITANYLAEVYAILIGLEWAMKLGFRRVKIRTDSAAARWAFSQDT-IPWFASARWGEIKRK 360
            + + + AE  A ++ LE A   G+R + + +DS +A   FS  + + W    RW   +R 
Sbjct: 1059 LASVFHAETLAFILALEHAAHHGWRNLWLESDSTSALMIFSNSSLVQWLLRNRWHNAQRL 1118

Query: 361  YDLIILEHSFRECNFVADTMDKRGRDLDNGVSLE 462
               +I  H   E N  AD +   G  +   + LE
Sbjct: 1119 GIQVISSHILHEGNRCADNLANMGHGIQGSIWLE 1152


>ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 338

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 7/139 (5%)
 Frame = +1

Query: 46  WSPPEDGELLLCCDGAVRGNPGRAGAGVVARDSCSAVLGAISLGLGITANYLAEVYAILI 225
           W+ P +  + +  DG+   NPG+ GAG + RD    ++ A +  LG   N  AE  A+L 
Sbjct: 161 WNRPSEQWIKINTDGSALTNPGQTGAGGILRDKEGKMVMAFATPLGEGTNNTAEAEAVLF 220

Query: 226 GLEWAMKLGFRRVKIRTDS-AAARWAFSQDTIPWFASARWGEIKRKYDLI------ILEH 384
           GL WA++LG R ++I  D+    +W   ++   W       +I+R   LI      +  H
Sbjct: 221 GLSWALELGHRNIQIELDAQLVVKWITRKEVPHWSVI---NQIERIQHLIMQTQNFMCTH 277

Query: 385 SFRECNFVADTMDKRGRDL 441
            FRE N+VAD + K   ++
Sbjct: 278 IFREANWVADALSKHSHNI 296


>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 389

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
 Frame = +1

Query: 46  WSPPEDGELLLCCDGAVRGNPGRAGAGVVARDSCSAVLGAISLGLGITANYLAEVYAILI 225
           W  P +G   L  DG+ + N G+ G G + RD    ++ A ++ LG   N  AE+ A L 
Sbjct: 212 WERPPEGIHKLNTDGSAKHNTGKIGGGGILRDHQGKLIYAFAIPLGFGTNNFAEIQAALH 271

Query: 226 GLEWAMKLGFRRVKIRTDSAAA-RWAFSQDTIPW---FASARWGEIKRKYDLIILEHSFR 393
           GL+W  + GF ++ +  DS    +W  ++ ++PW       +   I  K ++   +H +R
Sbjct: 272 GLQWCQQHGFEKIILEVDSELLHKWIINKSSVPWRCLHYIQQIQNISNKMEVFQCKHIYR 331

Query: 394 ECNFVADTMDKRGRDLD 444
           E N  AD + K    +D
Sbjct: 332 EANGTADLLAKWSHSMD 348


>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
          Length = 2019

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
 Frame = +1

Query: 46   WSPPEDGELLLCCDGAVRGNPGRAGAGVVARDSCSAVLGAISLGLGITANYLAEVYAILI 225
            W+ P    + L  DG+   NPG  GAG V R+    ++ A S  LG   N  AEV A + 
Sbjct: 1070 WTKPPYRWVKLNTDGSALSNPGSIGAGDVIRNHLGEIILAYSTPLGTGTNNQAEVEAAIF 1129

Query: 226  GLEWAMKLGFRRVKIRTDS-AAARWAFSQDTIPWFASARWGEIKR---KYDLIILEHSFR 393
            G+ W + + + +V +  DS     W  +   IPW  S++  ++ +   + D     H+FR
Sbjct: 1130 GIAWCIHMKYNQVILEVDSQLLVDWFKNNKLIPWNISSQMQQLHQLATQLDHFKCIHTFR 1189

Query: 394  ECNFVADTMDKRGRDLDN 447
            E NFVAD + K    + N
Sbjct: 1190 EANFVADVLSKHSHQIPN 1207


>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 308

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
 Frame = +1

Query: 25  HEVVECF--WSPPEDGELLLCCDGAVRGNPGRAGAGVVARDSCSAVLGAISLGLGITANY 198
           HE+  C   W+ P +  + +  DG+   N G+ GAG + RD    ++ A +  LG  +N 
Sbjct: 122 HEIKVCMVAWNRPPEQWIKINTDGSALTNLGQIGAGGILRDREGKMVLAFATPLGEGSNN 181

Query: 199 LAEVYAILIGLEWAMKLGFRRVKIRTDSAAARWAFSQDTIPWFASARWGEIKRKYDLII- 375
            AE  A L GL WA++LG+R + I  DS       S+ T P ++  +  +I+R   LI+ 
Sbjct: 182 KAETAAALFGLSWALELGYRNILIELDSQLVVQWISKKTAPHWSVTK--QIERIQHLIMQ 239

Query: 376 -----LEHSFRECNFVADTMDKRGRD 438
                  H FRE N+VAD++ K   +
Sbjct: 240 TQNFKCTHIFREANWVADSLSKHSHN 265


>ref|XP_004248867.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 181

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
 Frame = +1

Query: 46  WSPPEDGELLLCCDGAVRGNPGRAGAGVVARDSCSAVLGAISLGLGITANYLAEVYAILI 225
           W  P+DG   +  DG+     G  G G + RD    ++ A SL  G+  N +AE+ A L 
Sbjct: 4   WRKPDDGIYKINTDGSALQESGNIGGGGIVRDHQGNLIYAFSLPFGLGTNNIAEIKATLY 63

Query: 226 GLEWAMKLGFRRVKIRTDS-AAARWAFSQDTIPWFAS---ARWGEIKRKYDLIILEHSFR 393
           GL+W  + G++ +++  DS    +W  +   IPW       +  +I RK D    +H +R
Sbjct: 64  GLDWCEQHGYKSIELEVDSELLCKWINNTVGIPWRCQQTVQQIQDISRKLDYFQCKHVYR 123

Query: 394 ECNFVADTMDK 426
           E N  AD + K
Sbjct: 124 EANSTADLLAK 134


>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 57/166 (34%), Positives = 82/166 (49%), Gaps = 7/166 (4%)
 Frame = +1

Query: 46  WSPPEDGELLLCCDGAVRGNPGRAGAGVVARDSCSAVLGAISLGLGITANYLAEVYAILI 225
           W  PEDG + L  DGA RGNPG A AG V RD   A +G  ++ +G+ +  LAE++ +  
Sbjct: 153 WVSPEDGWVKLNTDGASRGNPGFATAGGVLRDHNGAWIGGFAVNIGVCSAPLAELWGVYY 212

Query: 226 GLEWAMKLGFRRVKIRTDSAAARWAFS---QDTIPW-FASARWGEIKRKYDLIILEHSFR 393
           GL  A   G RRV++  DS       +    D+ P  F      +   K  ++ + H +R
Sbjct: 213 GLFIAWGRGARRVELEVDSKMVVGFLTTGIADSHPLSFLLRLCYDFLSKGWIVRISHVYR 272

Query: 394 ECNFVADTMDKRGRDLDNGVSLEFIGRPDFLNSI---ETPNVSYYR 522
           E N +AD +      L  G+ L    RPD ++SI   +   VSY R
Sbjct: 273 EANRLADGLANYAFSLSLGLHL-LESRPDVVSSILLDDVAGVSYPR 317


>ref|XP_006408500.1| hypothetical protein EUTSA_v10021278mg [Eutrema salsugineum]
           gi|557109646|gb|ESQ49953.1| hypothetical protein
           EUTSA_v10021278mg [Eutrema salsugineum]
          Length = 282

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
 Frame = +1

Query: 52  PPEDGELLLCCDGAVRGNPGRAGAGVVARDSCSAVLGAISLGLGITANYLAEVYAILIGL 231
           P     + +  DGA +GNPG+AGAG V R S  +VL  +  G+G  +N +AE  A+++GL
Sbjct: 137 PANHDSITIEFDGASKGNPGKAGAGAVLRASDKSVLFYLREGVGTASNNVAEYRALILGL 196

Query: 232 EWAMKLGFRRVKIRTDSAAA------RWAFSQDTIPWFASARWGEIKRKYDLIILEHSFR 393
           + A++ GFR V+++ DS          W      +      +  E+KR++    ++H  R
Sbjct: 197 KCALEKGFRNVRVQGDSMLVCMQVQDAWKTKHPKMAELCK-QAKELKRQFKSFHIQHVDR 255

Query: 394 ECNFVADTMDKRGRDLDNGVSLEFIG 471
           E N  ADT       L  G + E  G
Sbjct: 256 EFNSDADTQANYAIHLAEGQTKEIAG 281


>gb|AFW61655.1| putative rnase H family protein [Zea mays]
          Length = 262

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
 Frame = +1

Query: 55  PEDGELLLCC---DGAVRGNPGRAGAGVVARDSCSAVLGAISLGLGITANYLAEVYAILI 225
           P+  E L C    DGA +GNPG+AGAG + R    +V+  +  GLGI  N  AE  A+++
Sbjct: 113 PKVDEQLSCILEFDGASKGNPGKAGAGAIIRQVDGSVIAQLREGLGIATNNAAEYRALIL 172

Query: 226 GLEWAMKLGFRRVKIRTDSAAA------RWAFSQDTIPWFASARWGEIKRKYDLIILEHS 387
           GL +A K GF+ ++ + DS          W    D +  F   +  E+K  + L  + H 
Sbjct: 173 GLTYAAKKGFKYIRAQGDSKLVCNQVQDIWRVKNDNMASFCK-KVKELKGTFHLFQIRHV 231

Query: 388 FRECNFVAD 414
            RE N  AD
Sbjct: 232 LREYNSAAD 240


>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 316

 Score = 72.0 bits (175), Expect = 9e-11
 Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 6/140 (4%)
 Frame = +1

Query: 25  HEVVEC--FWSPPEDGELLLCCDGAVRGNPGRAGAGVVARDSCSAVLGAISLGLGITANY 198
           H++  C   W+ P +  + +  DG+   NPG+ GAG + RD+   ++ A +  LG  +N 
Sbjct: 130 HDIKVCKVAWNRPPEEWIKINTDGSAINNPGKIGAGGILRDTEGRLVLAFATSLGEGSNN 189

Query: 199 LAEVYAILIGLEWAMKLGFRRVKIRTDS-AAARWAFSQDTIPWFASARWGEIK---RKYD 366
            AE+ A   GL WA+ L +R + +  DS    +W   + T  W  S +  +I+   ++  
Sbjct: 190 QAEMEAAQFGLSWAIDLDYRNIILEVDSQIVVQWITKKTTHHWSVSNQLEKIQQLIQRAH 249

Query: 367 LIILEHSFRECNFVADTMDK 426
               EH FRE N+ AD++ K
Sbjct: 250 KFKCEHIFREANWTADSLSK 269


>ref|XP_006659888.1| PREDICTED: uncharacterized protein LOC102712467 [Oryza brachyantha]
          Length = 388

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 49/138 (35%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
 Frame = +1

Query: 19  KMHEVVECFWSPPEDGELLLCCDGAVRGNPGRAGAGVVARDSCSAVLGAISLGLGITANY 198
           K  +VVE    P      LL  DGA +GNPG+AGAG V R     V+  +  GLGI  N 
Sbjct: 194 KQPKVVEQEPLPDSSLSCLLEFDGASKGNPGKAGAGAVIRRLDGTVIAQLREGLGIATNN 253

Query: 199 LAEVYAILIGLEWAMKLGFRRVKIRTDSAAA------RWAFSQDTIPWFASARWGEIKRK 360
            AE  A+++GL +A K GF+ ++ + DS          W    DT+      +  EIK +
Sbjct: 254 AAEYRALILGLRYAAKKGFKYIRAQGDSKLVCNQVQDVWRARHDTMADLCK-KVKEIKGR 312

Query: 361 YDLIILEHSFRECNFVAD 414
           +    + H  RE N  AD
Sbjct: 313 FHTFQINHVLREFNTDAD 330


>ref|XP_007031374.1| Polynucleotidyl transferase, ribonuclease H-like superfamily
           protein, putative isoform 1 [Theobroma cacao]
           gi|508710403|gb|EOY02300.1| Polynucleotidyl transferase,
           ribonuclease H-like superfamily protein, putative
           isoform 1 [Theobroma cacao]
          Length = 296

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 7/163 (4%)
 Frame = +1

Query: 4   RHRRVKMHEVVECFWSPPEDGELLLCCDGAVRGNPGRAGAGVVARDSCSAVLGAISLGLG 183
           R + + +   VE    P      ++  DGA +GNPG AGAG V R +   V+  +  G+G
Sbjct: 121 RMKHINLANQVETQMMPFNCQSYIVEFDGASKGNPGPAGAGAVLRAADGRVVCRLREGVG 180

Query: 184 ITANYLAEVYAILIGLEWAMKLGFRRVKIRTDS------AAARWAF-SQDTIPWFASARW 342
           I  N +AE    ++G++ A+K GF+ ++++ DS         RW   SQ+ +     A  
Sbjct: 181 IATNNVAEYRGAILGMKCALKKGFKHIRVQGDSNLVCMQVQGRWKIKSQNLVELNKQAM- 239

Query: 343 GEIKRKYDLIILEHSFRECNFVADTMDKRGRDLDNGVSLEFIG 471
            E+K K+    + H  RE N  AD +  +G +L + V  + IG
Sbjct: 240 -ELKDKFVSFQINHVDREFNSEADALANQGVNLMSVVKFKRIG 281


>ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 197

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
 Frame = +1

Query: 1   VRHRRVKMHEVVECFWSPPEDGELLLCCDGAVRGNPGRAGAGVVARDSCSAVLGAISLGL 180
           ++ R  K  ++VE  W  P   ++ L  DGA RG+PG AG G + RD    VLG  S  L
Sbjct: 16  IKGRPSKAPKIVEVMWHVPSIYQVKLNTDGAARGSPGLAGFGGIFRDHLGHVLGCFSGNL 75

Query: 181 GITANYLAEVYAILIGLEWAMKLGFRRVKIRTDSAAARWAFS--QDTIPWFASARWGEIK 354
           GI     AE+  ++  ++ A + G+  + I +DS       S  Q  +PW  +  W   +
Sbjct: 76  GIANALEAELQTVIHAIQMASQRGWHSLWIESDSTLVIHFLSSFQVDVPWRFTTEWFNCR 135

Query: 355 RKYDLIILE--HSFRECNFVADTMDKRGRD 438
                + ++  H +RE N +AD +   G D
Sbjct: 136 TILTTMTVKVSHIYREGNSIADCLANFGAD 165


>ref|XP_004234854.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 181

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
 Frame = +1

Query: 46  WSPPEDGELLLCCDGAVRGNPGRAGAGVVARDSCSAVLGAISLGLGITANYLAEVYAILI 225
           W  P D  + +  DG+   N G+ GAG + RD    +L A S  LG  +N  AE+ A L 
Sbjct: 4   WFKPPDQWIKINTDGSAIINEGKIGAGGIIRDKEGKLLMAFSTPLGEGSNNQAEIEATLF 63

Query: 226 GLEWAMKLGFRRVKIRTDS-AAARWAFSQDTIPWFASARWGEIKRKYDLII------LEH 384
           G+ WA++LGF+ + +  DS    +W  ++    W  +    +++R + +I+        H
Sbjct: 64  GMTWALELGFKNILLELDSQLVVQWISNKIAPQWSFT---NQLERLHHIIMQTQNFKCSH 120

Query: 385 SFRECNFVADTMDKRGRD 438
            FRE N+VAD + K   +
Sbjct: 121 IFREANWVADALSKHSHN 138


>gb|ACG35788.1| retrotransposon protein Ty3-gypsy subclass [Zea mays]
           gi|238009648|gb|ACR35859.1| unknown [Zea mays]
           gi|413921724|gb|AFW61656.1| putative rnase H family
           protein [Zea mays]
          Length = 336

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
 Frame = +1

Query: 85  DGAVRGNPGRAGAGVVARDSCSAVLGAISLGLGITANYLAEVYAILIGLEWAMKLGFRRV 264
           DGA +GNPG+AGAG + R    +V+  +  GLGI  N  AE  A+++GL +A K GF+ +
Sbjct: 200 DGASKGNPGKAGAGAIIRQVDGSVIAQLREGLGIATNNAAEYRALILGLTYAAKKGFKYI 259

Query: 265 KIRTDSAAA------RWAFSQDTIPWFASARWGEIKRKYDLIILEHSFRECNFVAD 414
           + + DS          W    D +  F   +  E+K  + L  + H  RE N  AD
Sbjct: 260 RAQGDSKLVCNQVQDIWRVKNDNMASFCK-KVKELKGTFHLFQIRHVLREYNSAAD 314


>ref|NP_001141955.1| putative rnase H family protein [Zea mays]
           gi|194706572|gb|ACF87370.1| unknown [Zea mays]
           gi|413921719|gb|AFW61651.1| putative rnase H family
           protein [Zea mays]
          Length = 192

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
 Frame = +1

Query: 85  DGAVRGNPGRAGAGVVARDSCSAVLGAISLGLGITANYLAEVYAILIGLEWAMKLGFRRV 264
           DGA +GNPG+AGAG + R    +V+  +  GLGI  N  AE  A+++GL +A K GF+ +
Sbjct: 56  DGASKGNPGKAGAGAIIRQVDGSVIAQLREGLGIATNNAAEYRALILGLTYAAKKGFKYI 115

Query: 265 KIRTDSAAA------RWAFSQDTIPWFASARWGEIKRKYDLIILEHSFRECNFVAD 414
           + + DS          W    D +  F   +  E+K  + L  + H  RE N  AD
Sbjct: 116 RAQGDSKLVCNQVQDIWRVKNDNMASFCK-KVKELKGTFHLFQIRHVLREYNSAAD 170