BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00037674
         (1127 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...   140   1e-30
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...   123   2e-25
ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein A...   119   2e-24
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                   115   3e-23
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A...   103   1e-19
ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein A...   103   2e-19
ref|XP_007047718.1| Uncharacterized protein TCM_000935 [Theobrom...   100   1e-18
ref|XP_007213453.1| hypothetical protein PRUPE_ppa024777mg, part...   100   1e-18
ref|XP_007018598.1| Uncharacterized protein TCM_034780 [Theobrom...    97   9e-18
gb|ABN08796.1| Ribonuclease H [Medicago truncatula]                    88   6e-15
ref|XP_004305406.1| PREDICTED: putative ribonuclease H protein A...    85   6e-14
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...    84   1e-13
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    84   1e-13
ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein A...    83   2e-13
ref|XP_004295654.1| PREDICTED: uncharacterized protein LOC101314...    82   4e-13
ref|XP_004308354.1| PREDICTED: putative ribonuclease H protein A...    82   5e-13
ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein A...    81   7e-13
ref|XP_004304990.1| PREDICTED: putative ribonuclease H protein A...    81   9e-13
ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein A...    80   2e-12
ref|XP_002990328.1| hypothetical protein SELMODRAFT_131456 [Sela...    79   3e-12

>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 872

 Score =  140 bits (353), Expect = 1e-30
 Identities = 96/333 (28%), Positives = 153/333 (45%), Gaps = 10/333 (3%)
 Frame = +3

Query: 6    ILLRRPRPLFREANLIWRNVVHPSLGAQAWKVININCCSTDDKLVSKFKREIVSYCVLCK 185
            + L++  P+      +W   + P +   AWKV+     S    L+ +    +VS C  C 
Sbjct: 516  LFLQQASPVVPWGKPLWSKFILPRMSLHAWKVMRGTVISYH--LLQRRGVALVSRCEFCG 573

Query: 186  RETESMQHILWDCLFSQKCWNWISIIFKLNPKPDLLD---SYKVAKGRSRMVKNLWLVAN 356
              TES+ HI   C F+   WN    IF++   P+ +    S  +A  RS  +K LWL+  
Sbjct: 574  NSTESLDHIFLHCSFAASVWNHFIYIFEIGLVPNTIAEVFSLGLAMDRSPQLKELWLICF 633

Query: 357  LAIRVELWLLRNDIVFDGAKLNWTKFKMKVYLRINENAKRMIGHMHNTCDDLRILRYYKV 536
             +I   +W  RN I FD    +       V   I  +++   GHMHNT  DL IL+ +  
Sbjct: 634  TSILWYIWHARNQIRFDSRTFSVAGVCRLVSRHIQASSRLATGHMHNTIHDLCILKSFGA 693

Query: 537  AHRSVKHMIPIECLWRPPDSDEILICCDGASIGNPGLAGLGIVARNNSCEVLGSLSIGLG 716
              RS +    +E +W PP    I I  DGA     G+ G G V R    + +G+ +  + 
Sbjct: 694  CCRSRRIPRMVEVIWHPPSIGWIKINSDGAWKHEEGIGGFGAVFRYYKGQFVGAFASHID 753

Query: 717  ITTNYLAEIEAVIHGLE--WAKQWRSRNIRVRSDSQSAVQAF*E-NFGPWSVRQRWLAVN 887
            I ++  A++  VI  +E  W + W  +++ +  D  + +      +  PW +R RWL  N
Sbjct: 754  IPSSIAAKVMVVITAIELAWVRDW--KHVWLEVDFSTVLDYIRSPSLVPWQLRVRWL--N 809

Query: 888  LWYR----RISFEHVYREINFVADGMAKRGSTL 974
              YR         H++RE N VAD +A  G+++
Sbjct: 810  CLYRISTMTFKSSHIFREGNRVADALANHGTSM 842


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
            gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
            protein ccsA [Medicago truncatula]
          Length = 666

 Score =  123 bits (308), Expect = 2e-25
 Identities = 89/336 (26%), Positives = 154/336 (45%), Gaps = 13/336 (3%)
 Frame = +3

Query: 51   IWRNVVHPSLGAQAWKVININCCSTDDKLVSKFKREIVSYCVLCKRETESMQHILWDCLF 230
            +W + + PS     W++++ N   TD+ L  K    IVS C  C +  ES QHI ++C  
Sbjct: 40   LWNSYIPPSRSFITWRLLH-NKLPTDENL-RKRGCLIVSICCFCMKSAESSQHIFFECHV 97

Query: 231  SQKCWNWISIIFKLNPKPDLLDSYKVAK-------GRSRMVKNLWLVANLAIRVELWLLR 389
            + + W+W+           LLD     +         S++V N+   A +     +W+ R
Sbjct: 98   TSRLWDWLG-----KGTDKLLDCSSCLQLLIRNWGSGSKLVNNILNSAIIHTIWSIWIER 152

Query: 390  NDIVFDGAKLNWTKFKMKVYLRINENAKRMIGHMHNTCDDLRILRYYKVAHRSVKHMIP- 566
            N   F       T     +   +  +    +   ++   D ++ + + +  + VK + P 
Sbjct: 153  NQRCFHNKHQAMTTLFNIILAEVKMSFSLCMIKGNSAMQDYKVAKLFNIPFK-VKRVTPH 211

Query: 567  IECLWRPPDSDEILICCDGASIGNPGLAGLGIVARNNSCEVLGSLSIGLGITTNYLAEIE 746
            ++ +W+PP  D + I CDG+S+G      +GIV R+++   LG++S  +G  T   AE  
Sbjct: 212  LDIIWKPPIGDIVKINCDGSSVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAEFC 271

Query: 747  AVIHGLEWAKQWRSRNIRVRSDSQSAVQAF*ENFG-PWSVRQRWLAVNLW----YRRISF 911
            A +  +E A++ +  ++ + +DS   V AF +  G PW +R RW   N W        S 
Sbjct: 272  AGMMAMEKAQEMQLMHVCLETDSLKVVNAFNKGLGVPWQMRARW--QNCWDFCDSISCSC 329

Query: 912  EHVYREINFVADGMAKRGSTLPMGTKDGYIGQPGFL 1019
             H+ RE N VAD +AK G  L +     +   P F+
Sbjct: 330  VHILREGNMVADALAKHGQGLSLYYTQLWTSPPPFI 365


>ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 364

 Score =  119 bits (298), Expect = 2e-24
 Identities = 96/332 (28%), Positives = 149/332 (44%), Gaps = 13/332 (3%)
 Frame = +3

Query: 18  RPR-PLFREANLIWRNVVHPSLGAQAWKVININCCSTDDKLVSKFKREIVSYCVLCKRET 194
           RPR P      LIW   + P +   +WKV+     S D  L+ +    + S CVLC R+ 
Sbjct: 25  RPRLPSLDWGKLIWSKFIIPRISLHSWKVLRGRVLSED--LLQRRGIALASRCVLCGRDG 82

Query: 195 ESMQHILWDCLFSQKCWNWISIIFKLNPKP----DLLDSYKVAKGRSRMVKNLWLVANLA 362
           ES+ HI   C F+   WN  + +F+L   P    DLL  Y    GRS  +K +WL+    
Sbjct: 83  ESLPHIFLTCSFAASLWNNRAGLFELGCLPQNLVDLL--YYGGVGRSHQLKEIWLICYTT 140

Query: 363 IRVELWLLRNDIVFDGAKLNWTKFKMKVYLRINENAKRMIGHMHNTCDDLRILRYYKVAH 542
               +W  RN +  D   +     +  +   +   +K  +G M N+  +LR+L+ + +  
Sbjct: 141 TLWFIWKARNKMRHDNCTIVVDAVRQLIMGHVKTASKLALGCMSNSLTELRVLKKFGLLC 200

Query: 543 RSVKHMIPIECLWRPPDSDEILICCDGASIGNPGLAGLGIVARNNSCEVLGSLSIGLGIT 722
           R  +     E  W PP    I +  DGA     G +G G + R+     LG+ +  L I 
Sbjct: 201 RPHRAPRITEVNWHPPLFGWIKVNTDGAWQKTTGKSGYGGIFRDFHGSFLGAFASNLEIL 260

Query: 723 TNYLAEIEAVIHGLE--WAKQWRSRNIRVRSDSQSAVQAF*E-NFGPWSVRQRWLAVNLW 893
            +  AE+ AVI  +E  W + W   +I +  DS   +    + +  PW +R  W     +
Sbjct: 261 NSVDAEVMAVIQAIELAWVRDW--EHIWLEVDSIIVLNFLQDPHLVPWRLRVGW---GNF 315

Query: 894 YRRIS-----FEHVYREINFVADGMAKRGSTL 974
             RIS       H++RE N VAD +A  G ++
Sbjct: 316 LHRISQMNFRSSHIFREGNQVADALANMGLSM 347


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score =  115 bits (289), Expect = 3e-23
 Identities = 84/322 (26%), Positives = 146/322 (45%), Gaps = 4/322 (1%)
 Frame = +3

Query: 27   PLFREANLIWRNVVHPSLGAQAWKVININCCSTDDKLVSKFKREIVSYCVLCKRETESMQ 206
            P    A ++W     P+     W+ ++ N   TDD L  +    +   C  C+++ E+  
Sbjct: 67   PTVHWAKMLWNAYTPPTGAFITWRFLH-NKLPTDDNLRKRGCYIVSICCCFCRKQAETSS 125

Query: 207  HILWDCLFSQKCWNWISIIFKLNPKPDLLDSYKVAKGRSRMVKNLWLVANLAIRVELWLL 386
            HI   C  + + W+W+     L      LD   +    SRMV+++   A + I   +WL 
Sbjct: 126  HIFLQCPVTLQLWDWL-----LKATDQHLDFSSILN-ISRMVQHVMNSAIVHIMWSIWLE 179

Query: 387  RNDIVFDGAKLNWTKFKMKVYLRINENAKRM-IGHMHNTCDDLRILRYYKVAHRSVKHMI 563
             N+  FDG +   +     +   +   +  + I    ++  D ++ R + +  ++ +   
Sbjct: 180  CNNKYFDGVQKPMSTLFNTILAEVLRLSFMLDIVKGASSMQDFKLARLFSIPFKTNRVNP 239

Query: 564  PIECLWRPPDSDEILICCDGASIGNPGLAGLGIVARNNSCEVLGSLSIGLGITTNYLAEI 743
              E +W PP    + I CDG+ +G+P    +G++ R +     G+ +  +G  T   AE 
Sbjct: 240  CREIIWVPPHGGCMKINCDGSVVGSPSCGSIGVIFRASQTMFCGAFAQNIGYATALEAEY 299

Query: 744  EAVIHGLEWAKQWRSRNIRVRSDSQSAVQAF*ENFG-PWSVRQRWLAVNLWYRRIS--FE 914
             A +  +E AK+    NI + +DS + ++AF  N G PW +  RW    L+ R I     
Sbjct: 300  SACMFAIEKAKELHLTNIWIETDSVNVIRAFHFNTGVPWKMHIRWHNCLLFCRSIRSLCT 359

Query: 915  HVYREINFVADGMAKRGSTLPM 980
            HV RE N VAD +AK G  L +
Sbjct: 360  HVNREGNLVADALAKNGQGLAL 381


>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 751

 Score =  103 bits (257), Expect = 1e-19
 Identities = 80/291 (27%), Positives = 131/291 (45%), Gaps = 10/291 (3%)
 Frame = +3

Query: 24   RPLFRE---ANLIWRNVVHPSLGAQAWKVININCCSTDDKLVSKFKREIVSYCVLCK-RE 191
            RP F +   A+ +W + + P     AW++ ++    TDD+L  +     VS C LC    
Sbjct: 462  RPYFEKLDWASSVWHSFIPPRYSVLAWRIFHLKL-PTDDQLQRR-GIPFVSVCQLCSFSH 519

Query: 192  TESMQHILWDCLFSQKCWNWISIIF--KLNPKPDLLDSYKVAKGR--SRMVKNLWLVANL 359
            TE + H+  +C F+Q  W W++  F   L     L D +    G+  S  +KN+W  + L
Sbjct: 520  TEDIPHLFVNCSFAQHIWQWLAYYFGTSLPSSGSLNDLWSSVTGKAFSPQLKNIWFASCL 579

Query: 360  AIRVELWLLRNDIVFDGAKLNWTKFKMKVYLRINENAKRMIGHMHNTCDDLRILRYYKVA 539
               + +W   N + FD  + +  +    V   +   A    G +    D   +     + 
Sbjct: 580  FALMAIWKSHNKLRFDNKQPSLMRVFRSVKAWVRYIAPYTPGCVRGVLDSKVLSSMGVIL 639

Query: 540  HRSVKHMIPIECLWRPPDSDEILICCDGASIGNPGLAGLGIVARNNSCEVLGSLSIGLGI 719
                +  + I  LW PP    + +  +G S GNPGLAG G V R++   ++G    GLG 
Sbjct: 640  VLKCQSALRI-VLWHPPLIPWLKLNTNGFSKGNPGLAGCGGVFRDSFGRLIGGYCQGLGT 698

Query: 720  TTNYLAEIEAVIHGLEWAKQWRSRNIRVRSDSQSAVQAF*EN--FGPWSVR 866
             T +  E+  VI G+E+A  +   +I + SDS + +Q    +    PWS R
Sbjct: 699  QTTFFVELMTVILGVEFAFHFGWHHIWLESDSTTILQCISSSSFAPPWSQR 749


>ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 409

 Score =  103 bits (256), Expect = 2e-19
 Identities = 94/334 (28%), Positives = 147/334 (44%), Gaps = 15/334 (4%)
 Frame = +3

Query: 18   RPR-PLFREANLIWRNVVHPSLGAQAWKVININCCSTDDKLVSKFKREIVSYCVLCKRET 194
            RPR P    + LIW   + P +   +WKV+     S D  L+ +    + S CVLC R+ 
Sbjct: 56   RPRLPSLDWSKLIWSKFIIPRISLHSWKVLRGRVLSED--LLQRRGIVLASRCVLCGRDC 113

Query: 195  ES-MQHILWDCLFSQKCWNWISIIFKLNPKP-DLLDS-YKVAKGRSRMVKNLWLVANLAI 365
            ES   HI   C F    WN  + +F+L   P +L+D  Y    GRS  +K +WL+     
Sbjct: 114  ESSFPHIFLTCSFVASLWNNWACLFELGSLPQNLVDLIYYGGVGRSHQLKEIWLIC---Y 170

Query: 366  RVELWLL---RNDIVFDGAKLNWTKFKMKVYLRINENAKRMIGHMHNTCDDLRILRYYKV 536
               LW +   RN I  D   +        +   +   +K   G M N+   LR+L+ + +
Sbjct: 171  TTTLWFIGKARNKIRHDNCTIVVDAVHQLIMGHVKAVSKLASGCMSNSLTKLRVLKKFGL 230

Query: 537  AHRSVKHMIPIECLWRPPDSDEILICCDGASIGNPGLAGLGIVARNNSCEVLGSLSIGLG 716
                 + +   +  W PP    I +  DGA     G +G G + R+     LG+ +  L 
Sbjct: 231  LCHPCQALRITKVNWHPPLFGWIKVNTDGAWQKTTGKSGYGGIFRDFHGSFLGAFASNLE 290

Query: 717  ITTNYLAEIEAVIHGLE--WAKQWRSRNIRVRSDSQSAVQAF*E-NFGPWSVRQRWLAVN 887
            I  +  AE+ AVI  +E  W + W  ++I +  DS   +    + +  PW +R   +A  
Sbjct: 291  IPNSVDAEVMAVIQAIELAWVRDW--KHILLEVDSAIVLNFLHDPHLVPWRLR---VACG 345

Query: 888  LWYRRIS-----FEHVYREINFVADGMAKRGSTL 974
                RIS       H++RE N VAD +   G ++
Sbjct: 346  NCLHRISQMNFRSSHIFREGNQVADTLVNMGLSM 379


>ref|XP_007047718.1| Uncharacterized protein TCM_000935 [Theobroma cacao]
            gi|508699979|gb|EOX91875.1| Uncharacterized protein
            TCM_000935 [Theobroma cacao]
          Length = 533

 Score =  100 bits (249), Expect = 1e-18
 Identities = 82/292 (28%), Positives = 136/292 (46%), Gaps = 27/292 (9%)
 Frame = +3

Query: 171  CVLCKRETESMQHILWDCLFSQKCWN---------WISI-----IFK---LNPKPDLLDS 299
            C+ CK   E+  H+ ++C  + + W+         W+S+      FK   L P P+    
Sbjct: 237  CLFCKAHLETPFHLFFNCFMAWEVWSLCCKKWCISWVSLGDVVSFFKAWMLMPLPN---- 292

Query: 300  YKVAKGRSRMVKNLWLVANLAIRVELWLLRNDIVFDGAKLNWTKFKMKVYLRINE--NAK 473
            +K    R  +   LW          LWL RN+I+F     ++ +    ++LR      +K
Sbjct: 293  HKREPWRMLLFATLW---------SLWLCRNEIIFRNKTFDFHQIVDIIFLRHTLWCKSK 343

Query: 474  RMIGHMH-NTCDDLRILRYYKVAHRSVKHMIPIECLWRPPDSDEILICCDGASIGNPGLA 650
              +GH+  N C    I    K     +K    +   W PP    + +  DGA+ G PG A
Sbjct: 344  WQLGHLSSNMCLTYPITSTVKGKRSKMK----VSSTWTPPPYGTLKLNIDGAAKGKPGPA 399

Query: 651  GLGIVARNNSCEVLGSLSIGLGITTNYLAEIEAVIHGLEW--AKQWRSR-NIRVRSDSQS 821
            G+G V R++   + G+ S  +GI  +  AE +A+  GL++  A  W S  ++ V SDS +
Sbjct: 400  GIGGVLRDHQGIIKGTFSHNIGIKDSNFAEFQAIHEGLKFFLASPWASNSDLEVESDSLN 459

Query: 822  AVQAF*ENFG-PWSVRQRWLAVNLW---YRRISFEHVYREINFVADGMAKRG 965
            A+    ++   PW ++    A+       R+++F HV RE+N +ADG+AK G
Sbjct: 460  AILWTRDHSKVPWRMKLISNAIETLCKSIRKVTFNHVSRELNLIADGVAKAG 511


>ref|XP_007213453.1| hypothetical protein PRUPE_ppa024777mg, partial [Prunus persica]
            gi|462409318|gb|EMJ14652.1| hypothetical protein
            PRUPE_ppa024777mg, partial [Prunus persica]
          Length = 465

 Score =  100 bits (249), Expect = 1e-18
 Identities = 92/330 (27%), Positives = 145/330 (43%), Gaps = 15/330 (4%)
 Frame = +3

Query: 24   RPLFREA---NLIWRNVVHPSLGAQAWKVININCCSTDDKLVSKFKREIVSYCVLCKRE- 191
            RP F +     LIW+  + P     AWKV++    + D                L KR  
Sbjct: 127  RPKFAKVPWCKLIWKPFIEPWKSFLAWKVMHGRLLTED---------------FLQKRAW 171

Query: 192  --TESMQHILWDCLFSQKCWNWISIIFKLN----PKPDLLDSYKVAKGRSRMVKNLWLVA 353
               E++ H+  +C F+   W+ + I+F L+    P   +L S  ++   S  + +LWL+ 
Sbjct: 172  MAPENINHLFSECPFTCSIWSSMFIVFGLHFTSGPLAVILSS-GLSAHFSPQLMDLWLLM 230

Query: 354  NLAIRVELWLLRNDIVFDGAKLNWTKFKMKVYLRINENAKRMIGHMHNTCDDLRILRYYK 533
               I   +W LRN + F+      +     +   +  ++    GH+ N   DL I+R   
Sbjct: 231  FRTIVWLIWDLRNKLRFEEKVSTVSSNCRTIINHVPASSPLARGHILNKVHDLCIIRSIG 290

Query: 534  VAHRSVKHMIPIECLWRPPDSDEILICCDGASIGNPGLAGLGIVARNNSCEVLGSLSIGL 713
            V +R   +   +E  W PP    + I  DGA   + G AG G V RN    VLG+ S  L
Sbjct: 291  VHYRPRPNSKIVEVTWHPPCFGFVKIKIDGACKRDSGKAGSGGVFRNYQGHVLGAFSANL 350

Query: 714  GITTNYLAEIEAVIHGLE--WAKQWRSRNIRVRSDSQSAVQAF*E-NFGPWSVRQRWLAV 884
             + +   AE+ AVI  +E  W   W   NI + +DS    + F   +  PW +R  W   
Sbjct: 351  DVPSGVHAEVLAVIKAIELAWLHAW--HNIWIETDSLLVTKFFRSPHLVPWRLRVDWQNC 408

Query: 885  NLWYRRISFE--HVYREINFVADGMAKRGS 968
             L  + +SF+  H++RE N   D +A  G+
Sbjct: 409  LLRLQHMSFKISHIFREGNHDVDALANHGA 438


>ref|XP_007018598.1| Uncharacterized protein TCM_034780 [Theobroma cacao]
            gi|508723926|gb|EOY15823.1| Uncharacterized protein
            TCM_034780 [Theobroma cacao]
          Length = 398

 Score = 97.4 bits (241), Expect = 9e-18
 Identities = 75/320 (23%), Positives = 145/320 (45%), Gaps = 14/320 (4%)
 Frame = +3

Query: 51   IWRNVVHPSLGAQAWKVININCCSTDDKLVSKFKREIV----SYCVLCKRETESMQHILW 218
            +W+    P +    W+V+ +   +   +L   FKR ++    S+C LC  E E+  H+ +
Sbjct: 74   LWKGHAPPKIEVFTWQVL-LGKVAVKHEL---FKRGLIDINTSFCTLCNAELETSSHLFF 129

Query: 219  DCLFSQKCWNWISIIFKLN-PKPDLLDSYKVAKGRSRMV---KNLWLVANLAIRVELWLL 386
             C  +   W     ++ L+   P    S+ V+   ++       +W +   +    +WL 
Sbjct: 130  TCSVAWNIWMHNCSLWGLSWVHPGDATSFFVSWQNNKPPYGSPEIWHMLFFSTLWSIWLC 189

Query: 387  RNDIVFDGAKLNWTKFKMKVYLRINENAKRMIGHMHNTCDDLRILRYYKVAHRSVKHMIP 566
            RN+I+F G  L+  + +  + +R+    K      H       +    ++   S K    
Sbjct: 190  RNEILFQGKHLDVNQLQDIILVRLAHWCKGKWPVNHIPASHF-LFEPSRICINSRKCKTK 248

Query: 567  IECLWRPPDSDEILICCDGASIGNPGLAGLGIVARNNSCEVLGSLSIGLGITTNYLAEIE 746
            + C W  P +    +  DG+++G PG  G+    R++   + G  S  +G+  +  AE  
Sbjct: 249  VVCSWMRPPTGSFKLNVDGSALGKPGPTGIRGAIRDHESFIKGVFSTPIGMEDSNYAEFL 308

Query: 747  AVIHGLE--WAKQWRSRNIRVRSDSQSAVQ-AF*ENFGPWSVRQRWLAVNLW---YRRIS 908
            A+  GL   ++  W S  + V SDS++A+  A   N  PW ++    ++  +   ++ ++
Sbjct: 309  AIKEGLSFFFSSPWASSTLHVESDSKNAITWASDHNSVPWRMKLLSNSIEAFKTSFKDLT 368

Query: 909  FEHVYREINFVADGMAKRGS 968
            F H+ RE N +ADG+AK G+
Sbjct: 369  FTHINREANALADGLAKAGA 388


>gb|ABN08796.1| Ribonuclease H [Medicago truncatula]
          Length = 221

 Score = 88.2 bits (217), Expect = 6e-15
 Identities = 55/182 (30%), Positives = 94/182 (51%), Gaps = 6/182 (3%)
 Frame = +3

Query: 492  HNTCDDLRILRYYKVAHRSVKHMIP-IECLWRPPDSDEILICCDGASIGNPGLAGLGIVA 668
            ++   D ++ + + +  + VK + P ++ +W+PP  D + I CDG+S+G      +GIV 
Sbjct: 24   NSAMQDYKVAKLFNIPFK-VKRVTPHLDIIWKPPIGDIVKINCDGSSVGRHPCGSIGIVI 82

Query: 669  RNNSCEVLGSLSIGLGITTNYLAEIEAVIHGLEWAKQWRSRNIRVRSDSQSAVQAF*ENF 848
            R+++   LG++S  +G  T   AE  A +  +E A++ +  ++ + +DS   V AF +  
Sbjct: 83   RDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHVCLETDSLKVVNAFNKGL 142

Query: 849  G-PWSVRQRWLAVNLW----YRRISFEHVYREINFVADGMAKRGSTLPMGTKDGYIGQPG 1013
            G PW +R RW   N W        S  H+ RE N VAD +AK G  L +     +   P 
Sbjct: 143  GVPWQMRARW--QNCWDFCDSISCSCVHILREGNMVADALAKHGQGLSLYYTQLWTSPPP 200

Query: 1014 FL 1019
            F+
Sbjct: 201  FI 202


>ref|XP_004305406.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 399

 Score = 84.7 bits (208), Expect = 6e-14
 Identities = 82/300 (27%), Positives = 121/300 (40%), Gaps = 8/300 (2%)
 Frame = +3

Query: 123 TDDKLVSKFKREIVSYCVLCKRETESMQHILWDCLFSQKCWNWISIIFKLNPKPDLLDSY 302
           T D+L SKF     + C LC  + E+  H+   C F+ + +  + I   ++     L   
Sbjct: 96  TTDRL-SKFGYIDDNSCPLCDNDNETADHLFGHCDFTTEVFRLVGISAPMDWHKGYLKVL 154

Query: 303 KVAKGRSRMVKNLWLVANLAIRVELWLLRNDIVFDGAKLNWTKFKMKVYLRINENAKRMI 482
           +         K L+    L I  ++W  RND +F       T          NE A    
Sbjct: 155 REMFINQPYDKFLFAKV-LIIYWQIWKARNDTIFRDVITTATNVVATAAFHFNETAL--- 210

Query: 483 GHMHNTCDDLRILRYYKVAHRSVKHMIPIECLWRPPDSDEILICCDGASIGNPGLAGLGI 662
                         Y  V    +    P    W PP ++ I I  DG+  G   + G   
Sbjct: 211 --------------YKAVVGGGISQTTPSTIRWLPPHNNFIKINFDGSVQGRSAVGGF-- 254

Query: 663 VARNNSCEVLGSLSIGLGITTNYLAEIEAVIHGLEWAKQWRSRNIRVRSDSQSAVQAF*E 842
           V RN+   V+ + + GLG TT   AE  A+   L  A+     N++V  DS+  + A   
Sbjct: 255 VFRNSDGNVILAAAKGLGSTTIPTAEATALRDNLVKARDRGYMNVQVEGDSKLVIDAING 314

Query: 843 NFGP-WSVRQ-----RWLAVNLWYRRISFEHVYREINFVADGMAKRGSTLPMGT--KDGY 998
              P W +++     R +A +  +  + F HVYRE NFVAD  A  G  LP G   +DGY
Sbjct: 315 KLSPPWRLQKIVQDIRTIATS--FSSVCFNHVYREANFVADAFANEGHQLPNGREWQDGY 372


>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 885

 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 71/323 (21%), Positives = 140/323 (43%), Gaps = 7/323 (2%)
 Frame = +3

Query: 9    LLRRPRPLFREANLIWRNVVHPSLGAQAWKVININCCSTDDKLVSKFKREIVSYCVLCKR 188
            + R  + + R+  +IW   +   +    W+V      +TDD L  K +  IVS C  C R
Sbjct: 511  ITRNKQEVRRDCEVIWNKELPFKINFFMWRVWKRRI-ATDDNL-KKMRINIVSRCWCCDR 568

Query: 189  ETE-SMQHILWDCLFSQKCWNWISIIFKLNPKPDLLDSYKVAKGRSRM---VKNLWLVAN 356
            + E +M H+      + K W + +    +N     L    ++  +      ++ ++    
Sbjct: 569  KKEETMTHLFPTAPITYKLWRYFAHFAGINIDGMHLQQLIISWWKHEATPKLQGIYKAIP 628

Query: 357  LAIRVELWLLRNDIVFDGAKLNWTKFKMKVYLRINENAKRMIGHMHNTCDDLRILRYYKV 536
              I   LW  RN +  D + ++W +    V   + +  K     + N     + +     
Sbjct: 629  AIIMWTLWKRRNALKHDSS-ISWERMVEMVIEVVRKMVKSQFPWIKNMRWTWQAIIQRLN 687

Query: 537  AHRSVKHMIPIECLWRPPDSDEILICCDGASIGNPGLAGLGIVARNNSCEVLGSLSIGLG 716
             ++   H++ +   W+PPD   +    DGA  GNPGL+  G   R++  +++ + + G+G
Sbjct: 688  QYKRKIHVLRVT--WKPPDDHYVKSNTDGACRGNPGLSSFGFCIRDDKGDLIYAKAKGIG 745

Query: 717  ITTNYLAEIEAVIHGLEWAKQWRSRNIRVRSDSQSAVQAF*ENFG-PWSVRQRWLAVNLW 893
            I TN  AE  A++  L      + + + + +DS S  +   + +  PW + ++   +   
Sbjct: 746  IATNMEAETVAILTALRECSNRKMQKVIIETDSLSLKKIIQQTWRVPWKIAEKVEEIREI 805

Query: 894  YRRI--SFEHVYREINFVADGMA 956
              +I     H++RE N +AD +A
Sbjct: 806  MEKIKAKITHIFREGNSLADSLA 828


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 80/330 (24%), Positives = 152/330 (46%), Gaps = 17/330 (5%)
 Frame = +3

Query: 39   EANLIWRNVVHPSLGAQAWKVININCCSTDDKLVSKFKRE---IVSYCVLCKRETESMQH 209
            E N IW     P +    WK  N    +T     S+ +R    +   C  C   +E++ H
Sbjct: 1048 EFNWIWGIHAPPKIKNFLWKACNDGLATT-----SRLERSHIFVPQNCCFCDCPSETICH 1102

Query: 210  ILWDCLFSQKCWNWISIIFKLNPKPDLLDSYKVAKGRSRMVK---NLWLVANLAIRV--- 371
            + + C F+   ++ +   F+    P    + +++  RS +     NL L     + +   
Sbjct: 1103 LCFQCPFTLDIYSHLEDKFQWPAYPSWFSTLQLSSFRSVLEACHINLTLEYLTKLSIVWW 1162

Query: 372  ELWLLRNDIVFDGAKLNWTKFKMKVYLRINENAKRMIGHMHNTCDDLRILRYYKVAHRSV 551
             +W  RN ++F+    ++++    ++  + +  K    ++     +  + +  K+  RS 
Sbjct: 1163 HVWYFRNKLIFNNESTSFSQASFIIHSFMGKWEK---ANLEIPSFNTPLPKDCKLPVRSG 1219

Query: 552  KHMIPIECLWRPPDSDEILICCDGASIGNPGLAGLGIVARNNSCEVLGSLSIGLGITTNY 731
            K++I     W PP+ D + +  DG+ + N G A  G V RN++ EVL + +  LG+  + 
Sbjct: 1220 KNLI-----WSPPNEDVLKVNFDGSKLDN-GQAAYGFVIRNSNGEVLMARAKALGVYPSI 1273

Query: 732  L-AEIEAVIHGLEWA---KQWRSRNIRVRSDSQSAVQAF*ENF-GPWSVRQRWL---AVN 887
            L AE   ++ G++ A   + W SR I    D+ + + A   +  GPW++    L   A+ 
Sbjct: 1274 LMAEAMGLLEGIKGAISLQNW-SRKIIFEGDNIAVINAMSPSATGPWTIANIILDAGALL 1332

Query: 888  LWYRRISFEHVYREINFVADGMAKRGSTLP 977
              ++ + F+H YRE N +AD MA +G + P
Sbjct: 1333 GHFQEVKFQHCYREANRLADFMAHKGHSHP 1362


>ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 487

 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 88/344 (25%), Positives = 141/344 (40%), Gaps = 15/344 (4%)
 Frame = +3

Query: 45   NLIWRNVVHPSLGAQAWKVININCCSTDDKLVSKFKREIVSYCVLCKRETESMQHILWDC 224
            N +W+  V   +    W ++      T D+L SKF     + C LC  + E+  H+   C
Sbjct: 163  NKVWKLDVPLKVKLFGWLLLR-GRLKTRDRL-SKFGYIDDNSCPLCDSDNETADHLFGHC 220

Query: 225  LFSQKCWNWISIIFKLNPKPDLLDSYKVAKGRSRMVKNLWL---------VANLAIRVEL 377
             F+ +       +F+L     L+D ++   G  ++++ +++            L I  ++
Sbjct: 221  DFTTE-------VFRLAGISALMDWHE---GYLKVLREMFINQPYDKFLFAKVLIIYWQI 270

Query: 378  WLLRNDIVFDGAKLNWTKFKMKVYLRINENAKRMIGHMHNTCDDLRILRYYKVAHRSVKH 557
            W  RND +F       T          NE A                  Y  V    +  
Sbjct: 271  WKARNDTIFRDVITTATNVAATAAFHFNETAL-----------------YKAVVGGGISQ 313

Query: 558  MIPIECLWRPPDSDEILICCDGASIGNPGLAGLGIVARNNSCEVLGSLSIGLGITTNYLA 737
                   W PP ++ I I  DG+  G    A  G V RN+   V+ + + GLG TT   A
Sbjct: 314  TTSSTIRWLPPHNNFIKINFDGSVQGRS--AAGGFVFRNSDGNVILAAAKGLGSTTIPTA 371

Query: 738  EIEAVIHGLEWAKQWRSRNIRVRSDSQSAVQAF*ENFGP-WSVRQ-----RWLAVNLWYR 899
            E  A+   L  A+     N++V  DS+  + A      P W +++     R +A +  + 
Sbjct: 372  EATALRDSLVKARDRGYMNVQVEGDSKLVIDAINGKLSPPWRLQKIVQDIRTIATS--FS 429

Query: 900  RISFEHVYREINFVADGMAKRGSTLPMGTKDGYIGQPGFLTVVE 1031
             + F HVYRE NF+AD  A  G  LP    +G+  Q G+ TVV+
Sbjct: 430  SVCFNHVYREANFMADAFANEGHQLP----NGHEWQDGYPTVVD 469


>ref|XP_004295654.1| PREDICTED: uncharacterized protein LOC101314263 [Fragaria vesca
            subsp. vesca]
          Length = 839

 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 5/208 (2%)
 Frame = +3

Query: 165  SYCVLCKRETESMQHILWDCLFSQKCWNWISIIFKLNPKPDLLD-----SYKVAKGRSRM 329
            S C LC    E+  H+ ++C FS + W  I  +F +N     LD     SY +  G    
Sbjct: 630  SMCSLCHASVENSHHLFFECSFSLRVWCAILSLFGVNSH--FLDIHAFFSYPLQHGFGTQ 687

Query: 330  VKNLWLVANLAIRVELWLLRNDIVFDGAKLNWTKFKMKVYLRINENAKRMIGHMHNTCDD 509
            ++ LW     A    +W  RN I F             +  +I E     +G MHN+  +
Sbjct: 688  LQLLWWGMMGAGFYSIWDARNSIRFHERHSTPDCLIHSIKSQIREIDSWGLGTMHNSAGE 747

Query: 510  LRILRYYKVAHRSVKHMIPIECLWRPPDSDEILICCDGASIGNPGLAGLGIVARNNSCEV 689
            L   R   +  R+ +     E  W  P   ++ +  DGA+ G PGLAG G + R++    
Sbjct: 748  LCTFRALGIKGRASRSHQIREVHWHAPSVFQVKVNTDGAARGTPGLAGFGGIFRDHLGNC 807

Query: 690  LGSLSIGLGITTNYLAEIEAVIHGLEWA 773
            +G  +  +GI T   AE++A+IH    A
Sbjct: 808  MGCFAGSMGIATALEAELQAIIHAASMA 835


>ref|XP_004308354.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 235

 Score = 81.6 bits (200), Expect = 5e-13
 Identities = 73/233 (31%), Positives = 105/233 (45%), Gaps = 5/233 (2%)
 Frame = +3

Query: 375  LWLLRNDIVFDGAKLNWTKFKMKVYLRINENAKRMIGHMHNTCDDLRILRYYKVAHRSVK 554
            LW  RN + FD    N+      +   I + +    GH     D  R+L    VA +  K
Sbjct: 3    LWKARNKLRFDNRPPNFYTMCCSIMAWIRQISLFAPGHYKGVLD-ARLLASLGVASKGGK 61

Query: 555  HMIPIECLWRPPDSDEILICCDGASIGNPGLAGLGIVARNNSCEVLGSLSIGLGITTNYL 734
                   LW+PP    I +  +G + GNPG A  G V R+ S   LGS    LG  T++ 
Sbjct: 62   APRIQHVLWQPPFFPWIKVNTNGLAKGNPGPAACGGVFRDASGGFLGSFCHSLGWKTSFY 121

Query: 735  AEIEAVIHGLEWAKQWRSRNIRVRSDSQSAVQAF-*ENFGP-WSVRQRWLAVNLWYRRIS 908
            +E+  VI  +E A       + + SDS S V  F   +F P W++R RW    L  R+++
Sbjct: 122  SELYVVILAIEIAHDKGWVYLWLESDSVSVVACFSSRSFSPTWNLRVRWNNCLLIIRQMN 181

Query: 909  F--EHVYREINFVADGMAKRG-STLPMGTKDGYIGQPGFLTVVEWPNRPYYRF 1058
            F   H++RE N VAD MA  G S +     D  + +       ++   P YRF
Sbjct: 182  FRYSHIFREGNIVADKMANLGLSNVSFTWYDNPLTELHGFLQADYLGIPNYRF 234


>ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 197

 Score = 81.3 bits (199), Expect = 7e-13
 Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
 Frame = +3

Query: 489 MHNTCDDLRILRYYKVAHRSVKHMIPIECLWRPPDSDEILICCDGASIGNPGLAGLGIVA 668
           M NT  +L IL    +  R  K    +E +W  P   ++ +  DGA+ G+PGLAG G + 
Sbjct: 1   MKNTVGELCILHRIGIKGRPSKAPKIVEVMWHVPSIYQVKLNTDGAARGSPGLAGFGGIF 60

Query: 669 RNNSCEVLGSLSIGLGITTNYLAEIEAVIHGLEWAKQWRSRNIRVRSDSQSAVQAF*ENF 848
           R++   VLG  S  LGI     AE++ VIH ++ A Q    ++ + SDS   +  F  +F
Sbjct: 61  RDHLGHVLGCFSGNLGIANALEAELQTVIHAIQMASQRGWHSLWIESDSTLVIH-FLSSF 119

Query: 849 G---PWSVRQRWLAVN--LWYRRISFEHVYREINFVADGMAKRGS 968
               PW     W      L    +   H+YRE N +AD +A  G+
Sbjct: 120 QVDVPWRFTTEWFNCRTILTTMTVKVSHIYREGNSIADCLANFGA 164


>ref|XP_004304990.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 202

 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 57/187 (30%), Positives = 88/187 (47%), Gaps = 5/187 (2%)
 Frame = +3

Query: 423 WTKFKMKVYLRINENAKRMIGHMHNTCDDLRILRYYKVAHRSVKHMIPIECLWRPPDSDE 602
           W +F +  +  I        G MHN   DL+I++ +    R  +    IE +W PP    
Sbjct: 15  WLQFVISFWGYIRAAGWIANGPMHNLVQDLQIIKSFGAECRLGRAPRVIEVVWHPPVIGW 74

Query: 603 ILICCDGASIGNPGLAGLGIVARNNSCEVLGSLSIGLGITTNYLAEIEAVIHGLE--WAK 776
           + I  DGA     G+ G G + R+  C VLG+ S  + I ++  AE+ AVI  +E  W +
Sbjct: 75  VKINSDGAWKHAEGVGGFGAIFRDFKCHVLGAFSSNIDIPSSVAAEVIAVIVAIELAWVR 134

Query: 777 QWRSRNIRVRSDSQSAVQAF*EN-FGPWSVRQRWLAVNLWYRRISF--EHVYREINFVAD 947
            W  ++I +  DS   +         PW +R RWL       ++ F   H++RE N VAD
Sbjct: 135 DW--KHIWLEVDSSLVLDYLRSPLLVPWHLRVRWLNCLRCISKMIFRSSHIFREGNKVAD 192

Query: 948 GMAKRGS 968
            +A  G+
Sbjct: 193 ALANHGT 199


>ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 197

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 56/165 (33%), Positives = 82/165 (49%), Gaps = 5/165 (3%)
 Frame = +3

Query: 489 MHNTCDDLRILRYYKVAHRSVKHMIPIECLWRPPDSDEILICCDGASIGNPGLAGLGIVA 668
           M NT  +L IL    +  R  K    +E +W      ++ +  DGA+ G+PGLAG G + 
Sbjct: 1   MKNTVGELCILHRIGIKGRPSKVPKIVEVMWHVLSIYQVKLNTDGAARGSPGLAGFGGIF 60

Query: 669 RNNSCEVLGSLSIGLGITTNYLAEIEAVIHGLEWAKQWRSRNIRVRSDSQSAVQAF*ENF 848
           R++  +VL   S  LGI T   AE++AVIH ++ A Q   R++ + SDS   +  F  +F
Sbjct: 61  RDHLGQVLCCFSGNLGIATALEAELQAVIHAIQMASQRGWRSLWIESDSTLVIH-FLSSF 119

Query: 849 G---PWSVRQRWLAVN--LWYRRISFEHVYREINFVADGMAKRGS 968
               PW     W      L    +   H+YRE N VAD +A  G+
Sbjct: 120 QVDVPWRFTTEWFNCRTILTSMTVKVSHIYREGNRVADCLANFGA 164


>ref|XP_002990328.1| hypothetical protein SELMODRAFT_131456 [Selaginella moellendorffii]
           gi|302825346|ref|XP_002994296.1| hypothetical protein
           SELMODRAFT_138460 [Selaginella moellendorffii]
           gi|300137827|gb|EFJ04640.1| hypothetical protein
           SELMODRAFT_138460 [Selaginella moellendorffii]
           gi|300141890|gb|EFJ08597.1| hypothetical protein
           SELMODRAFT_131456 [Selaginella moellendorffii]
          Length = 131

 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 51/128 (39%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
 Frame = +3

Query: 618 DGASIGNPGLAGLGIVARNNSCEVLGSLSIGLGITTNYLAEIEAVIHGLEWAKQWRSRNI 797
           DGAS GNPG AG G + RN    V+  L +GLG  TN +AE EA+I GL+ A      +I
Sbjct: 2   DGASKGNPGKAGAGALLRNPKGSVIEKLYMGLGTATNNVAEYEALILGLQAALDRNVTSI 61

Query: 798 RVRSDSQSAVQAF*ENFGPWSVRQRWL--------AVNLWYRRISFEHVYREINFVADGM 953
           +V  DS    +   +  G W+VR   L        A+++ +   S  HV RE+N  AD +
Sbjct: 62  QVFGDSNLVCK---QVAGEWAVRHEGLRALHAQVQALSMQFTTFSIHHVDREMNTEADAL 118

Query: 954 AKRGSTLP 977
           A +G TLP
Sbjct: 119 ANKGITLP 126