BLASTX nr result
ID: Papaver25_contig00037346
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00037346
(670 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007031497.1| PIF1 helicase, putative [Theobroma cacao] gi... 71 2e-14
ref|NP_001152059.1| retrotransposon protein [Zea mays] gi|195652... 62 7e-12
gb|AFW88907.1| hypothetical protein ZEAMMB73_503872 [Zea mays] 61 1e-11
tpg|DAA40077.1| TPA: hypothetical protein ZEAMMB73_356509 [Zea m... 62 1e-11
gb|AFW57635.1| hypothetical protein ZEAMMB73_449704 [Zea mays] 59 2e-11
tpg|DAA54730.1| TPA: hypothetical protein ZEAMMB73_628014 [Zea m... 62 2e-11
tpg|DAA54731.1| TPA: hypothetical protein ZEAMMB73_628014, parti... 62 2e-11
ref|XP_007033578.1| Uncharacterized protein TCM_019749 [Theobrom... 57 3e-11
gb|AFW57473.1| retrotransposon protein [Zea mays] 60 4e-11
gb|AFW63447.1| hypothetical protein ZEAMMB73_293789 [Zea mays] 58 2e-10
gb|AFW87564.1| hypothetical protein ZEAMMB73_967726 [Zea mays] 53 3e-10
gb|AFW75918.1| hypothetical protein ZEAMMB73_045866 [Zea mays] 57 8e-10
gb|AFW85172.1| hypothetical protein ZEAMMB73_007991 [Zea mays] 55 1e-09
ref|XP_003612651.1| Replication factor A protein [Medicago trunc... 54 2e-09
ref|XP_004231719.1| PREDICTED: uncharacterized protein LOC101267... 49 2e-09
gb|AFW69417.1| hypothetical protein ZEAMMB73_473384 [Zea mays] 56 2e-09
tpg|DAA49898.1| TPA: hypothetical protein ZEAMMB73_405364 [Zea m... 53 3e-09
ref|XP_004980439.1| PREDICTED: replication factor A protein 1-li... 55 4e-09
ref|XP_006389497.1| hypothetical protein POPTR_0022s00390g [Popu... 54 5e-09
ref|XP_003606911.1| Replication factor A 51 kDa subunit [Medicag... 53 5e-09
>ref|XP_007031497.1| PIF1 helicase, putative [Theobroma cacao] gi|508710526|gb|EOY02423.1|
PIF1 helicase, putative [Theobroma cacao]
Length = 1873
Score = 71.2 bits (173), Expect(2) = 2e-14
Identities = 35/123 (28%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Frame = +2
Query: 2 FGSPIQHGRIISIENYDIRRAKQTYRPVDTEHIIVFTPNTQVRVLDATRVSIPDYKYAFV 181
F S ++ G + I ++ + + K++Y + I T T++ ++ +S + + F+
Sbjct: 1455 FESILKEGHVYCISDFKVSKPKKSYNVISAPSAITITSKTKIVKASSSALSFQRHYFQFL 1514
Query: 182 EFESLPEQLESGNSTLTDVVGKLISITPVKVV-TRYDGKKITKREIGIVNMRGQVIKITL 358
EFE LP + + N TLTD++G +IS++ V + K+ KR + + N++G +I TL
Sbjct: 1515 EFEHLPHRYKI-NETLTDIIGLIISMSKVTAIYVSNKSTKVPKRNLQLQNIKGTIINATL 1573
Query: 359 WGN 367
WG+
Sbjct: 1574 WGD 1576
Score = 34.3 bits (77), Expect(2) = 2e-14
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +3
Query: 387 EIIKSHPKPVILIAVSTYVNKFRGKYSLASTNGTKLYYNLSIPEVEQLTKR 539
+II KP+I++A T V +++ + S+AS + +K+Y +L+IP V + R
Sbjct: 1584 DIIGLKSKPIIILAAMT-VGEYQRQPSVASCSASKIYVDLNIPIVADMKAR 1633
>ref|NP_001152059.1| retrotransposon protein [Zea mays] gi|195652219|gb|ACG45577.1|
retrotransposon protein [Zea mays]
Length = 525
Score = 61.6 bits (148), Expect(2) = 7e-12
Identities = 39/129 (30%), Positives = 67/129 (51%)
Frame = +2
Query: 5 GSPIQHGRIISIENYDIRRAKQTYRPVDTEHIIVFTPNTQVRVLDATRVSIPDYKYAFVE 184
GS I+ ++ ++ + + ++ ++PVD +I FT TQ +V+ P Y Y
Sbjct: 65 GSLIEIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQVFPRYIYKLTC 124
Query: 185 FESLPEQLESGNSTLTDVVGKLISITPVKVVTRYDGKKITKREIGIVNMRGQVIKITLWG 364
FE++ + +++ + L DV+G L I P ++ Y+ I R+I I N +KITLWG
Sbjct: 125 FENIEDNIDN-RTYLIDVLGMLTQINPPHLI-GYNNSTII-RDIFIKNTSDMSLKITLWG 181
Query: 365 NSTALISRN 391
N + S N
Sbjct: 182 NQASGFSIN 190
Score = 35.0 bits (79), Expect(2) = 7e-12
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +3
Query: 396 KSHPKPVILIAVSTYVNKFRGKYSLASTNGTKLYYNLSIPEVEQLTKR 539
+S+ +P++++ V +F+G+ L+ST + Y+N IPE + R
Sbjct: 195 QSNNQPIVILLVGFLAKRFKGQPYLSSTTASSWYFNPGIPEAQTYYNR 242
>gb|AFW88907.1| hypothetical protein ZEAMMB73_503872 [Zea mays]
Length = 553
Score = 61.2 bits (147), Expect(2) = 1e-11
Identities = 38/127 (29%), Positives = 66/127 (51%)
Frame = +2
Query: 5 GSPIQHGRIISIENYDIRRAKQTYRPVDTEHIIVFTPNTQVRVLDATRVSIPDYKYAFVE 184
GS I+ ++ ++ + + ++ ++PVD +I FT TQ +V+ P Y Y
Sbjct: 95 GSLIEIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQVFPRYIYKLTC 154
Query: 185 FESLPEQLESGNSTLTDVVGKLISITPVKVVTRYDGKKITKREIGIVNMRGQVIKITLWG 364
FE++ + +++ + L DV+G L I P ++ Y+ I R+I I N +KITLWG
Sbjct: 155 FENIEDNIDN-RTYLIDVLGMLTQINPPHLI-GYNNSTII-RDIFIENTSDMSLKITLWG 211
Query: 365 NSTALIS 385
N + S
Sbjct: 212 NQASSFS 218
Score = 35.0 bits (79), Expect(2) = 1e-11
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +3
Query: 396 KSHPKPVILIAVSTYVNKFRGKYSLASTNGTKLYYNLSIPEVEQLTKR 539
+S+ +P++++ V +F+G+ L+ST + Y+N IPE + R
Sbjct: 225 QSNNQPIVILLVGFLAKRFKGQPYLSSTTASSWYFNPGIPEAQTYYNR 272
>tpg|DAA40077.1| TPA: hypothetical protein ZEAMMB73_356509 [Zea mays]
Length = 388
Score = 61.6 bits (148), Expect(2) = 1e-11
Identities = 38/127 (29%), Positives = 66/127 (51%)
Frame = +2
Query: 5 GSPIQHGRIISIENYDIRRAKQTYRPVDTEHIIVFTPNTQVRVLDATRVSIPDYKYAFVE 184
GS I+ ++ ++ + + ++ ++PVD +I FT TQ +V+ P Y Y
Sbjct: 96 GSMIEIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQVFPRYIYKLTC 155
Query: 185 FESLPEQLESGNSTLTDVVGKLISITPVKVVTRYDGKKITKREIGIVNMRGQVIKITLWG 364
FE++ + +++ + L DV+G L I P ++ Y+ I R+I I N +KITLWG
Sbjct: 156 FENIEDNIDN-RTYLIDVLGMLTQINPPHLI-GYNNSTII-RDIFIKNTSDMSLKITLWG 212
Query: 365 NSTALIS 385
N + S
Sbjct: 213 NQASSFS 219
Score = 34.7 bits (78), Expect(2) = 1e-11
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +3
Query: 396 KSHPKPVILIAVSTYVNKFRGKYSLASTNGTKLYYNLSIPEVEQLTKR 539
+S+ +P++++ V +F+G+ L+ST + Y+N IPE + R
Sbjct: 226 QSNNQPIVILLVRFLAKRFKGQPYLSSTTASSWYFNPGIPEAQTYYNR 273
>gb|AFW57635.1| hypothetical protein ZEAMMB73_449704 [Zea mays]
Length = 459
Score = 58.9 bits (141), Expect(2) = 2e-11
Identities = 41/129 (31%), Positives = 67/129 (51%)
Frame = +2
Query: 5 GSPIQHGRIISIENYDIRRAKQTYRPVDTEHIIVFTPNTQVRVLDATRVSIPDYKYAFVE 184
GS IQ ++ I ++ + ++ ++PV +I FT TQ +V++ P Y Y
Sbjct: 71 GSLIQIDKVYEIRHFRVMPSRGYFKPVHNNLMIQFTLYTQAKVVNDPPHIFPIYIYNLTS 130
Query: 185 FESLPEQLESGNSTLTDVVGKLISITPVKVVTRYDGKKITKREIGIVNMRGQVIKITLWG 364
FE + E +++ N L DV+G L I+ VV Y+ I R+I I ++ +KITLWG
Sbjct: 131 FEKVEENVDNRNY-LIDVIGMLTQISAPHVVG-YNNSSIV-RDIFIKDISDASLKITLWG 187
Query: 365 NSTALISRN 391
+ + S N
Sbjct: 188 DQASGFSIN 196
Score = 36.6 bits (83), Expect(2) = 2e-11
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 396 KSHPKPVILIAVSTYVNKFRGKYSLASTNGTKLYYNLSIPEVEQ 527
+S+ KP++++ V +F+G+ L+ T T Y+N +IPE ++
Sbjct: 201 ESNNKPIVIMFVGCLAKQFKGQSYLSGTTATTWYFNPNIPEAQE 244
>tpg|DAA54730.1| TPA: hypothetical protein ZEAMMB73_628014 [Zea mays]
Length = 495
Score = 62.4 bits (150), Expect(2) = 2e-11
Identities = 38/127 (29%), Positives = 66/127 (51%)
Frame = +2
Query: 5 GSPIQHGRIISIENYDIRRAKQTYRPVDTEHIIVFTPNTQVRVLDATRVSIPDYKYAFVE 184
GS I+ ++ ++ + + ++ ++PVD +I FT TQ +V+ P Y Y
Sbjct: 68 GSLIEIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQMFPRYIYKLTS 127
Query: 185 FESLPEQLESGNSTLTDVVGKLISITPVKVVTRYDGKKITKREIGIVNMRGQVIKITLWG 364
FE++ + +++ + L DV+G L I P ++ Y+ I R+I I N +KITLWG
Sbjct: 128 FENIEDNIDN-RTYLIDVLGMLTQIDPPHLI-GYNNSTII-RDIYIKNASDMSLKITLWG 184
Query: 365 NSTALIS 385
N + S
Sbjct: 185 NQASNFS 191
Score = 32.7 bits (73), Expect(2) = 2e-11
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 396 KSHPKPVILIAVSTYVNKFRGKYSLASTNGTKLYYNLSIPEVEQLTKR 539
+S +P++++ V +F+G+ L+ T + Y+N IPE + R
Sbjct: 198 QSSNQPIVILLVGFLAKRFKGQPYLSGTTASSWYFNPGIPEAQTYYNR 245
>tpg|DAA54731.1| TPA: hypothetical protein ZEAMMB73_628014, partial [Zea mays]
Length = 489
Score = 62.4 bits (150), Expect(2) = 2e-11
Identities = 38/127 (29%), Positives = 66/127 (51%)
Frame = +2
Query: 5 GSPIQHGRIISIENYDIRRAKQTYRPVDTEHIIVFTPNTQVRVLDATRVSIPDYKYAFVE 184
GS I+ ++ ++ + + ++ ++PVD +I FT TQ +V+ P Y Y
Sbjct: 68 GSLIEIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQMFPRYIYKLTS 127
Query: 185 FESLPEQLESGNSTLTDVVGKLISITPVKVVTRYDGKKITKREIGIVNMRGQVIKITLWG 364
FE++ + +++ + L DV+G L I P ++ Y+ I R+I I N +KITLWG
Sbjct: 128 FENIEDNIDN-RTYLIDVLGMLTQIDPPHLI-GYNNSTII-RDIYIKNASDMSLKITLWG 184
Query: 365 NSTALIS 385
N + S
Sbjct: 185 NQASNFS 191
Score = 32.7 bits (73), Expect(2) = 2e-11
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 396 KSHPKPVILIAVSTYVNKFRGKYSLASTNGTKLYYNLSIPEVEQLTKR 539
+S +P++++ V +F+G+ L+ T + Y+N IPE + R
Sbjct: 198 QSSNQPIVILLVGFLAKRFKGQPYLSGTTASSWYFNPGIPEAQTYYNR 245
>ref|XP_007033578.1| Uncharacterized protein TCM_019749 [Theobroma cacao]
gi|508712607|gb|EOY04504.1| Uncharacterized protein
TCM_019749 [Theobroma cacao]
Length = 870
Score = 57.0 bits (136), Expect(2) = 3e-11
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +2
Query: 101 IVFTPNTQVRVLDATRVSIPDYKYAFVEFESLPEQLESGNSTLTDVVGKLISITPVKVV- 277
I T T++ ++ +S + + F+EFE LP + + N TLTD++G +IS++ V +
Sbjct: 485 ITITSKTKIVKASSSALSFQRHYFQFLEFEHLPHRYKI-NETLTDIIGLIISMSKVTAIY 543
Query: 278 TRYDGKKITKREIGIVNMRGQVIKITLWGN 367
K+ KR + + N++G +I TLWG+
Sbjct: 544 VSNKSTKVPKRNLQLQNIKGTIINATLWGD 573
Score = 37.4 bits (85), Expect(2) = 3e-11
Identities = 19/51 (37%), Positives = 34/51 (66%)
Frame = +3
Query: 387 EIIKSHPKPVILIAVSTYVNKFRGKYSLASTNGTKLYYNLSIPEVEQLTKR 539
+II KP+I++A T V +++G+ S+AS + +K+Y +L+IP V + R
Sbjct: 581 DIIGLKSKPIIILAAMT-VGEYQGQPSVASCSASKIYVDLNIPIVADMKAR 630
>gb|AFW57473.1| retrotransposon protein [Zea mays]
Length = 581
Score = 60.5 bits (145), Expect(2) = 4e-11
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Frame = +2
Query: 14 IQHGRIISIEN-YDIRRAKQT-----YRPVDTEHIIVFTPNTQVRVLDATRVSIPDYKYA 175
+ G II IE Y+++R + T ++PVD +I FT TQ +V+ P Y Y
Sbjct: 105 VDKGSIIEIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQVFPRYIYK 164
Query: 176 FVEFESLPEQLESGNSTLTDVVGKLISITPVKVVTRYDGKKITKREIGIVNMRGQVIKIT 355
FE++ + +++ + L DV+G L I P V Y+ I R+I I N +KIT
Sbjct: 165 LTCFENIEDSIDN-RTYLIDVLGMLTQINPPHPV-GYNNSTII-RDIFIKNTSDMSLKIT 221
Query: 356 LWGNSTALIS 385
LWGN + S
Sbjct: 222 LWGNQASSFS 231
Score = 33.9 bits (76), Expect(2) = 4e-11
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +3
Query: 396 KSHPKPVILIAVSTYVNKFRGKYSLASTNGTKLYYNLSIPEVEQLTKR 539
+S+ +P++++ V +F+G+ L+ST + Y+N IPE + R
Sbjct: 238 QSNKQPIVILLVGFLAKRFKGQPYLSSTAASSWYFNPVIPEAQTYYNR 285
>gb|AFW63447.1| hypothetical protein ZEAMMB73_293789 [Zea mays]
Length = 520
Score = 57.8 bits (138), Expect(2) = 2e-10
Identities = 36/127 (28%), Positives = 66/127 (51%)
Frame = +2
Query: 5 GSPIQHGRIISIENYDIRRAKQTYRPVDTEHIIVFTPNTQVRVLDATRVSIPDYKYAFVE 184
GS IQ ++ ++ + + ++ Y+PVD +I FT TQ +V++ + P Y Y
Sbjct: 65 GSLIQIDKVYELKRFRVTPSRNYYKPVDNSMMIQFTLYTQAKVVEDPPPTFPRYAYKLTS 124
Query: 185 FESLPEQLESGNSTLTDVVGKLISITPVKVVTRYDGKKITKREIGIVNMRGQVIKITLWG 364
FE++ +++ + L DV+G L I + V Y+ I R+I + ++ K+TLWG
Sbjct: 125 FENIGNNVDN-KTYLIDVLGILTEIGSLHHV-GYNNSNII-RDIFLKDINNTSTKVTLWG 181
Query: 365 NSTALIS 385
+ + S
Sbjct: 182 HQASSFS 188
Score = 33.9 bits (76), Expect(2) = 2e-10
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +3
Query: 408 KPVILIAVSTYVNKFRGKYSLASTNGTKLYYNLSIPEVE----QLTKRSIAPIRGRSMVG 575
KPV+++ V +F+G+ L++T Y+N IPE + +L + IR ++
Sbjct: 199 KPVVVLFVGCLAKRFKGEAYLSATAACTWYFNPDIPEAQVYYSKLLNTKLQMIRPQATEK 258
Query: 576 ELAIQKRKSILELQDAVWDPKKTGEQHLQL 665
EL + L ++D KT E+ LQL
Sbjct: 259 EL---QASQTLNIED------KTIEELLQL 279
>gb|AFW87564.1| hypothetical protein ZEAMMB73_967726 [Zea mays]
Length = 289
Score = 53.1 bits (126), Expect(2) = 3e-10
Identities = 38/124 (30%), Positives = 62/124 (50%)
Frame = +2
Query: 5 GSPIQHGRIISIENYDIRRAKQTYRPVDTEHIIVFTPNTQVRVLDATRVSIPDYKYAFVE 184
GS IQ + I ++ + ++ ++PV +I FT TQ +V++ P Y Y
Sbjct: 65 GSLIQIDIVYEIRHFRVMPSRGYFKPVHNNLMIQFTLYTQAKVVNDPPHIFPIYIYNLTS 124
Query: 185 FESLPEQLESGNSTLTDVVGKLISITPVKVVTRYDGKKITKREIGIVNMRGQVIKITLWG 364
FE + E +++ N L DV+G L I V Y+ I R+I I ++ +KITLWG
Sbjct: 125 FEKVEENVDNRNY-LIDVIGMLTQIGAPHVAG-YNNSSIV-RDIFIKDISDASLKITLWG 181
Query: 365 NSTA 376
+ +
Sbjct: 182 DQAS 185
Score = 38.1 bits (87), Expect(2) = 3e-10
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +3
Query: 396 KSHPKPVILIAVSTYVNKFRGKYSLASTNGTKLYYNLSIPEVEQ 527
+S+ KP++++ V +F+G+ L+ST T Y+N +IPE ++
Sbjct: 195 ESNNKPIVIMFVGCLAKQFKGQSYLSSTTATTWYFNPNIPEAQE 238
>gb|AFW75918.1| hypothetical protein ZEAMMB73_045866 [Zea mays]
Length = 514
Score = 57.4 bits (137), Expect(2) = 8e-10
Identities = 36/127 (28%), Positives = 66/127 (51%)
Frame = +2
Query: 5 GSPIQHGRIISIENYDIRRAKQTYRPVDTEHIIVFTPNTQVRVLDATRVSIPDYKYAFVE 184
GS IQ ++ ++ + + ++ Y+PVD +I FT TQ +V++ + P Y Y
Sbjct: 18 GSLIQIDKVYELKRFRVAPSRNYYKPVDNSMMIQFTLYTQAKVVEDPPPTFPRYAYKLTS 77
Query: 185 FESLPEQLESGNSTLTDVVGKLISITPVKVVTRYDGKKITKREIGIVNMRGQVIKITLWG 364
FE++ +++ + L DV+G L I + V Y+ I R+I + ++ K+TLWG
Sbjct: 78 FENIGNNVDN-KTYLIDVLGILTEIGSLYHV-GYNNSNII-RDIFLKDINNTSTKVTLWG 134
Query: 365 NSTALIS 385
+ + S
Sbjct: 135 HQASSFS 141
Score = 32.3 bits (72), Expect(2) = 8e-10
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 408 KPVILIAVSTYVNKFRGKYSLASTNGTKLYYNLSIPEVE 524
KP++++ V +F+G+ L++T Y+N IPE +
Sbjct: 152 KPIVVLFVGCLAKRFKGEAYLSATTACTWYFNPDIPEAQ 190
>gb|AFW85172.1| hypothetical protein ZEAMMB73_007991 [Zea mays]
Length = 504
Score = 55.1 bits (131), Expect(2) = 1e-09
Identities = 35/126 (27%), Positives = 64/126 (50%)
Frame = +2
Query: 8 SPIQHGRIISIENYDIRRAKQTYRPVDTEHIIVFTPNTQVRVLDATRVSIPDYKYAFVEF 187
S IQ ++ ++ + + ++ Y+PVD +I FT TQ +V+ + P Y Y F
Sbjct: 66 SLIQIDKVYELKRFRVAPSRNYYKPVDNSMMIQFTLYTQAKVVKDPPPNFPRYAYKLTSF 125
Query: 188 ESLPEQLESGNSTLTDVVGKLISITPVKVVTRYDGKKITKREIGIVNMRGQVIKITLWGN 367
E + + +++ + L DV+G L I + V Y+ I R+I + ++ K+TLWG+
Sbjct: 126 EDISDNVDN-KTYLIDVLGILTEIGSLHHV-GYNNSNII-RDIFLKDINNASTKVTLWGH 182
Query: 368 STALIS 385
+ S
Sbjct: 183 QASSFS 188
Score = 34.3 bits (77), Expect(2) = 1e-09
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +3
Query: 408 KPVILIAVSTYVNKFRGKYSLASTNGTKLYYNLSIPEVE----QLTKRSIAPIRGRSMVG 575
KPV+++ V +F+G+ L++T Y+N IPE + +L + IR ++
Sbjct: 199 KPVVILFVGCLAKRFKGEAYLSATAACTWYFNPDIPEAQMYYNKLLNTKLHMIRPQATAE 258
Query: 576 ELAIQKRKSILELQDAVWDPKKTGEQHLQL 665
EL + +I + KT E+ LQL
Sbjct: 259 ELQASQTPNIED---------KTIEELLQL 279
>ref|XP_003612651.1| Replication factor A protein [Medicago truncatula]
gi|355513986|gb|AES95609.1| Replication factor A protein
[Medicago truncatula]
Length = 477
Score = 54.3 bits (129), Expect(2) = 2e-09
Identities = 33/126 (26%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Frame = +2
Query: 14 IQHGRIISIENYDIRRAKQTYRPVDTE-HIIVFTPNTQVRVLDATRVSIPDYKYAFVEFE 190
+Q G+I I +Y++ + K+ Y V+ ++ F + V + +IP Y + FV F
Sbjct: 59 LQEGKIYVISHYEVSKNKEKYAVVENNPSMLSFYGDAIVTEEGSDDNTIPRYIFEFVNFN 118
Query: 191 SLPEQLESGNSTLTDVVGKLISITPVKVVTRYDGKKITKREIGIVNMRGQVIKITLWGNS 370
L ++ G L DV+G +I + P++ T +G K+ + + + G V+K+TLW +
Sbjct: 119 DLIKRC--GKEVLADVIGFIIDVDPIEEKTTVNG-KVDMLSLHLGDGSGNVLKVTLWDDY 175
Query: 371 TALISR 388
+ ++
Sbjct: 176 APMFNQ 181
Score = 34.3 bits (77), Expect(2) = 2e-09
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 384 VEIIKSHPKPVILIAVSTYVNKFRGKYSL--ASTNGTKLYYNLSIPEVEQL 530
++ + + PKP + I ST V +++G L +S+ T +Y N+ PEV L
Sbjct: 184 IDQMHATPKPNVAIFTSTLVKQYQGNCELYVSSSRSTTIYINIDTPEVADL 234
>ref|XP_004231719.1| PREDICTED: uncharacterized protein LOC101267175 [Solanum
lycopersicum]
Length = 1171
Score = 48.9 bits (115), Expect(2) = 2e-09
Identities = 34/120 (28%), Positives = 57/120 (47%)
Frame = +2
Query: 2 FGSPIQHGRIISIENYDIRRAKQTYRPVDTEHIIVFTPNTQVRVLDATRVSIPDYKYAFV 181
F + + I+N+ + + YRPV I+F +T ++ L V IP + F+
Sbjct: 698 FKDKLNESSVFIIKNFKVVESIGGYRPVQNSLKIIFLASTAIKNLSEDIVEIPLNGFEFI 757
Query: 182 EFESLPEQLESGNSTLTDVVGKLISITPVKVVTRYDGKKITKREIGIVNMRGQVIKITLW 361
+ + ++ + N L+DVVG L I ++ + G K R+I I+N KITLW
Sbjct: 758 NPDVIDSRV-NNNIVLSDVVGCLYGIGDIESI----GSKWKNRDIHILNDYLAKAKITLW 812
Score = 39.3 bits (90), Expect(2) = 2e-09
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 16/101 (15%)
Frame = +3
Query: 411 PVILIAVSTYVNKFRGKYSLASTNGTKLYYNLSIPEVEQLTKRSIAPIRGRSMVGELAIQ 590
P +I ST V +FRG+ S ++T +K+Y NL I + RS+AP + +M E+ I
Sbjct: 830 PYTVIVTSTTVKEFRGEISFSTTYASKIYVNLDIDYI-----RSLAP-KFSTMSNEVQII 883
Query: 591 K----------------RKSILELQDAVWDPKKTGEQHLQL 665
K R I EL +A W + + HL++
Sbjct: 884 KSSNVNSLPREEEMFLNRMDIKELLEAEWSSELQYKIHLKV 924
>gb|AFW69417.1| hypothetical protein ZEAMMB73_473384 [Zea mays]
Length = 317
Score = 55.8 bits (133), Expect(2) = 2e-09
Identities = 35/127 (27%), Positives = 65/127 (51%)
Frame = +2
Query: 5 GSPIQHGRIISIENYDIRRAKQTYRPVDTEHIIVFTPNTQVRVLDATRVSIPDYKYAFVE 184
GS IQ ++ ++ + + ++ Y+PVD +I FT TQ +++ + P Y Y
Sbjct: 65 GSLIQIDKVYELKRFRVAPSRNYYKPVDNSMMIQFTLYTQAKLVQDPPPTFPRYAYKLTS 124
Query: 185 FESLPEQLESGNSTLTDVVGKLISITPVKVVTRYDGKKITKREIGIVNMRGQVIKITLWG 364
FE++ +++ + L DV+G L I + V Y+ I R+I + ++ K+TLWG
Sbjct: 125 FENIGNNVDN-KTYLIDVLGILTEIGSLHHV-GYNNSNII-RDIFLKDINNTSTKVTLWG 181
Query: 365 NSTALIS 385
+ + S
Sbjct: 182 HQASSFS 188
Score = 32.3 bits (72), Expect(2) = 2e-09
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +3
Query: 408 KPVILIAVSTYVNKFRGKYSLASTNGTKLYYNLSIPEVE----QLTKRSIAPIRGRSMVG 575
KPV+++ V +F+G+ L++T Y+N IPE + +L + IR +
Sbjct: 199 KPVVVLFVGCLAKRFKGEAYLSATAACTWYFNPDIPEAQVYYSKLVNTKLQMIRPEATEQ 258
Query: 576 ELAIQKRKSILELQDAVWDPKKTGEQHLQL 665
E + L ++D KT E+ LQL
Sbjct: 259 EF---QASQTLNIED------KTIEELLQL 279
>tpg|DAA49898.1| TPA: hypothetical protein ZEAMMB73_405364 [Zea mays]
Length = 217
Score = 53.1 bits (126), Expect(2) = 3e-09
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Frame = +2
Query: 5 GSPIQHGRIISIENYDIRRAKQTYRPVDTEHIIVFTPNTQVRVLDATRVSIPDYKYAFVE 184
GS I+ ++ ++ + + ++ ++PVD +I FT TQ +V+ P Y Y
Sbjct: 21 GSLIEIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQVFPRYIYKLTC 80
Query: 185 FESLPEQLESGN------------------STLTDVVGKLISITPVKVVTRYDGKKITKR 310
FE++ + +++ S DV+G L I P ++ Y+ I R
Sbjct: 81 FENIEDNIDNRTYLIGYKDIHIVYKGIIYFSNNIDVLGMLTQINPPHLI-GYNNSTII-R 138
Query: 311 EIGIVNMRGQVIKITLWGNSTALIS 385
+I I N +KITLWGN + S
Sbjct: 139 DIFIKNTSNMSMKITLWGNQASSFS 163
Score = 34.7 bits (78), Expect(2) = 3e-09
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +3
Query: 396 KSHPKPVILIAVSTYVNKFRGKYSLASTNGTKLYYNLSIPEVE 524
+S+ +P++++ V +F+G+ L+ST + Y+N IPE +
Sbjct: 170 QSNNQPIVILLVGFLAKRFKGQPYLSSTTASSWYFNPGIPEAQ 212
>ref|XP_004980439.1| PREDICTED: replication factor A protein 1-like [Setaria italica]
Length = 437
Score = 55.1 bits (131), Expect(2) = 4e-09
Identities = 28/122 (22%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Frame = +2
Query: 2 FGSPIQHGRIISIENYDIRRAKQTYRPVDTEHIIVFTPNTQVRVLDA-TRVSIPDYKYAF 178
F I G + N+ + + ++ ++ + + + I TP T + + A S+P Y ++F
Sbjct: 64 FSKSIVEGHCYCVRNFQVSKQERKFKAIPSTYTIFLTPWTIIEEIHAEVSASLPRYVFSF 123
Query: 179 VEFESLPEQLESGNSTLTDVVGKLISITPVKVVTRYDGKKITKREIGIVNMRGQVIKITL 358
V+F+ L L D++G+L + V + +G + + E+ + ++ +V+ +TL
Sbjct: 124 VDFDDLDHSRARHGQGLVDIIGQLAVVHLVVHSSSLNGPSV-RWEVELPDLSDRVLSVTL 182
Query: 359 WG 364
WG
Sbjct: 183 WG 184
Score = 32.3 bits (72), Expect(2) = 4e-09
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 357 YGEILLP*SVEII---KSHPKPVILIAVSTYVNKFRGKYSLASTNGTKLYYNLSIPEV 521
+GE P E++ + +PV++I V ++G + S TK Y N+ IPEV
Sbjct: 183 WGEYATPFEDEVLIETTGNDEPVVIIFARMQVRLYQGAPNCLSNAATKWYINIDIPEV 240
>ref|XP_006389497.1| hypothetical protein POPTR_0022s00390g [Populus trichocarpa]
gi|550312320|gb|ERP48411.1| hypothetical protein
POPTR_0022s00390g [Populus trichocarpa]
Length = 1748
Score = 53.9 bits (128), Expect(2) = 5e-09
Identities = 37/120 (30%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Frame = +2
Query: 29 IISIENYDIRRAKQTY--RPVDT----EHIIVFTPNTQVRVLDATRVSIPDYKYAFVEFE 190
II +Y+I+ TY R V+T + +I NT++ ++A +P Y + F+++
Sbjct: 1554 IIEGNHYEIK-GFYTYENRVVNTVTVHDAVIDLKSNTKITGIEAITPHVPRYYFNFIDYA 1612
Query: 191 SLPEQLESGNSTLTDVVGKLISITPVKVVTRYDGKKITKREIGIVNMRGQVIKITLWGNS 370
+ + G+ LTDV+G+L ++ P++ V KRE + N+RG+ + ITLWG+S
Sbjct: 1613 HILTK-SKGSRILTDVLGRLKALQPLEQVMVCGQTLENKREFMLENIRGEELHITLWGDS 1671
Score = 33.1 bits (74), Expect(2) = 5e-09
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 405 PKPVILIAVSTYVNKFRGKYSLASTNGTKLYYNLSIPE 518
P PVI+ V +F+GK +L ST + Y+N IPE
Sbjct: 1684 PSPVIIAFAGFRVTEFKGKPNLNSTTTSLWYFNPDIPE 1721
>ref|XP_003606911.1| Replication factor A 51 kDa subunit [Medicago truncatula]
gi|357477581|ref|XP_003609076.1| Replication factor A 51
kDa subunit [Medicago truncatula]
gi|357477673|ref|XP_003609122.1| Replication factor A 51
kDa subunit [Medicago truncatula]
gi|355507966|gb|AES89108.1| Replication factor A 51 kDa
subunit [Medicago truncatula]
gi|355510131|gb|AES91273.1| Replication factor A 51 kDa
subunit [Medicago truncatula]
gi|355510177|gb|AES91319.1| Replication factor A 51 kDa
subunit [Medicago truncatula]
Length = 502
Score = 52.8 bits (125), Expect(2) = 5e-09
Identities = 32/126 (25%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Frame = +2
Query: 14 IQHGRIISIENYDIRRAKQTYRPVDTE-HIIVFTPNTQVRVLDATRVSIPDYKYAFVEFE 190
+Q G+I I ++++ + K+ Y V+ ++ F + V + +IP Y + FV F
Sbjct: 91 LQEGKIYVISHFEVSKNKEKYAVVENNPSMLSFYGDAIVTEEGSDDNTIPRYIFEFVNFN 150
Query: 191 SLPEQLESGNSTLTDVVGKLISITPVKVVTRYDGKKITKREIGIVNMRGQVIKITLWGNS 370
L ++ G L DV+G +I + P++ T +G K+ + + + G V+K+TLW +
Sbjct: 151 DLIKRC--GKEVLADVIGFIIDVDPIEEKTTVNG-KVDMLSLHLGDGSGNVLKVTLWDDY 207
Query: 371 TALISR 388
+ ++
Sbjct: 208 APMFNQ 213
Score = 34.3 bits (77), Expect(2) = 5e-09
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 384 VEIIKSHPKPVILIAVSTYVNKFRGKYSL--ASTNGTKLYYNLSIPEVEQL 530
++ + + PKP + I ST V +++G L +S+ T +Y N+ PEV L
Sbjct: 216 IDQMHATPKPNVAIFTSTLVKQYQGNCELYVSSSRSTTIYINIDTPEVADL 266