BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00037072
         (600 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006605035.1| PREDICTED: uncharacterized protein LOC102664...    73   7e-11
ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266...    73   7e-11
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...    72   2e-10
emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis ...    70   3e-10
dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|...    69   8e-10
dbj|BAK41507.1| polyprotein [Arabidopsis thaliana]                     69   8e-10
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]                     67   4e-09
dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis th...    67   4e-09
ref|XP_004967136.1| PREDICTED: uncharacterized protein LOC101762...    67   5e-09
ref|XP_004971816.1| PREDICTED: uncharacterized protein LOC101779...    66   7e-09
ref|XP_004248587.1| PREDICTED: uncharacterized protein LOC101255...    66   7e-09
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal...    66   7e-09
dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]     66   7e-09
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]                     66   7e-09
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]      66   7e-09
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha...    66   7e-09
gb|AAU90262.1| integrase core domain containing protein [Oryza s...    65   2e-08
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...    64   2e-08
dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]                     64   3e-08
dbj|BAM44534.1| polyprotein [Arabidopsis thaliana]                     64   3e-08

>ref|XP_006605035.1| PREDICTED: uncharacterized protein LOC102664868 [Glycine max]
          Length = 471

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 47/126 (37%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
 Frame = -1

Query: 372 NNGNLYSAPSSQRGRFYLPCQLCGRPNHEAPDCWNIFDXXXXXXXXXXXXXXXR----AY 205
           NN  L+   +    R    CQLC +P HEA +CW   +               R    A 
Sbjct: 262 NNFGLFPRHNIDNPRRRPICQLCSKPGHEAINCWQRTNQTDYPSRRANPRVSSRQANVAQ 321

Query: 204 TAHTGLFPTPSWIPDSGATDHITNDLSHLQF*K-YTGPDQIQMGNGSSIPISNVGSSFLG 28
           T  + +   PSW  D+GATDH+T D+S L     YT  D++Q+GNG  + IS+VGSS L 
Sbjct: 322 TGTSSIVMDPSWYFDTGATDHVTPDISKLTIANDYTDDDKLQVGNGKHLSISHVGSSLL- 380

Query: 27  TPNRKL 10
            PN  L
Sbjct: 381 -PNLSL 385


>ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266915 [Solanum
           lycopersicum]
          Length = 544

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 52/151 (34%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
 Frame = -1

Query: 441 TSSSQSETVPARPNNTANTFRFPNNGNLYSAPSSQRGRFYLPCQLCGRPNHEAPDCWNIF 262
           T+S +S T   RP NT N  R           SS R    + CQ+C +PNH A +C+N  
Sbjct: 262 TTSQKSST---RPTNT-NPPR-----------SSNRSSPRIICQICEKPNHHARNCYNRN 306

Query: 261 DXXXXXXXXXXXXXXXRAYTAHTGLFPTPS------WIPDSGATDHITNDLSHLQF-*KY 103
           +                  T  T    +PS      W  DSGAT+H+T+DLS L     Y
Sbjct: 307 NMDTYPPTRSSNRPQANMVTPSTNSMMSPSAIIDNSWFADSGATNHVTSDLSQLSIHMDY 366

Query: 102 TGPDQIQMGNGSSIPISNVGSSFLGTPNRKL 10
            G DQ+ +GNG  + I+++GSS L    R L
Sbjct: 367 NGEDQLALGNGQKLSINHIGSSKLSCATRPL 397


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
           gi|531389|gb|AAA57005.1| copia-like retrotransposon
           Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 50/130 (38%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
 Frame = -1

Query: 384 FRFPNNGNLYS----APSSQRGRFYLPCQLCGRPNHEAPDCWNIFDXXXXXXXXXXXXXX 217
           F+    GN YS    A +S R R    CQ+C R  H A +CW  FD              
Sbjct: 259 FQSFGRGNNYSGATDADTSSRPR----CQVCSRVGHTALNCWYRFDENYVPDQRSANS-- 312

Query: 216 XRAYTAHTGLFPTPSWIPDSGATDHITNDLSHLQF*-KYTGPDQIQMGNGSSIPISNVGS 40
                AH      P W  D+GATDHIT DL  L    KYTG DQI   NG+ + ISN+G+
Sbjct: 313 ----AAHQNGSNVP-WYTDTGATDHITGDLDRLTMHDKYTGTDQIIAANGTGMTISNIGN 367

Query: 39  SFLGTPNRKL 10
           + + T +R L
Sbjct: 368 AIVPTSSRSL 377


>emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268350|emb|CAB78643.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 1942

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
 Frame = -1

Query: 435 SSQSETVPARPNNT--ANTFRFPNNGNLYSAP--SSQRGRFYLPCQLCGRPNHEAPDCWN 268
           ++ S+  P    NT  AN+  + N G           RG+    CQ+CG+  H A +CW+
Sbjct: 206 AANSDVSPHLAFNTVQANSVFYTNRGRGQGNRRFGGSRGQERPTCQICGKHGHHALNCWH 265

Query: 267 IFDXXXXXXXXXXXXXXXRA--YTAHTGLFPTPSWIPDSGATDHITNDLSHLQF*K-YTG 97
            FD               +    T H+G      W+ DS AT HITN   HLQ  K Y G
Sbjct: 266 RFDNSYQLDVLPQALPATQITDITDHSG----SEWVTDSAATAHITNSPRHLQQTKSYAG 321

Query: 96  PDQIQMGNGSSIPISNVGSSFLGT 25
            D + +GNG+ +PI++ GS+ +G+
Sbjct: 322 SDSVMVGNGNFLPITHTGSTSIGS 345


>dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|dbj|BAK41505.1|
           polyprotein [Arabidopsis thaliana]
           gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis
           thaliana] gi|338746557|dbj|BAK41508.1| polyprotein
           [Arabidopsis thaliana] gi|338746559|dbj|BAK41509.1|
           polyprotein [Arabidopsis thaliana]
          Length = 1447

 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 53/166 (31%), Positives = 74/166 (44%), Gaps = 17/166 (10%)
 Frame = -1

Query: 456 PISFRTSSSQSETVPARPNNTANTFRFPN-NGNLYSAPSSQRGRFYLP-----------C 313
           PI+    S ++ T     NN   T R+ N N N  S P  Q    + P           C
Sbjct: 201 PITANAVSHRNTTTTTNNNNGNRTNRYDNRNNNNNSKPWQQSSSNFRPNNNQSKPYLGKC 260

Query: 312 QLCGRPNHEAPDCWNI----FDXXXXXXXXXXXXXXXRAYTAHTGLFPTPSWIPDSGATD 145
           Q+CG   H A  C  +                     RA  A    + + SW+ DSGAT 
Sbjct: 261 QICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTLWQPRANLALGSPYSSNSWLLDSGATH 320

Query: 144 HITNDLSHLQF*K-YTGPDQIQMGNGSSIPISNVGSSFLGTPNRKL 10
           HIT+D ++L   + YTG D + + +GS+IPIS+ GS+ L T +R L
Sbjct: 321 HITSDFNNLSLHQPYTGGDDVMVVDGSTIPISHTGSTSLSTKSRPL 366


>dbj|BAK41507.1| polyprotein [Arabidopsis thaliana]
          Length = 1447

 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 53/166 (31%), Positives = 74/166 (44%), Gaps = 17/166 (10%)
 Frame = -1

Query: 456 PISFRTSSSQSETVPARPNNTANTFRFPN-NGNLYSAPSSQRGRFYLP-----------C 313
           PI+    S ++ T     NN   T R+ N N N  S P  Q    + P           C
Sbjct: 201 PITANAVSHRNTTTTTNNNNGNRTNRYDNRNNNNNSKPWQQSSSNFRPNNNQSKPYLGKC 260

Query: 312 QLCGRPNHEAPDCWNI----FDXXXXXXXXXXXXXXXRAYTAHTGLFPTPSWIPDSGATD 145
           Q+CG   H A  C  +                     RA  A    + + SW+ DSGAT 
Sbjct: 261 QICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTLWQPRANLALGSPYSSNSWLLDSGATH 320

Query: 144 HITNDLSHLQF*K-YTGPDQIQMGNGSSIPISNVGSSFLGTPNRKL 10
           HIT+D ++L   + YTG D + + +GS+IPIS+ GS+ L T +R L
Sbjct: 321 HITSDFNNLSLHQPYTGGDDVMVVDGSTIPISHTGSTSLSTKSRPL 366


>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
          Length = 1431

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
 Frame = -1

Query: 456 PISFRTSSSQSETVPARPNNTANTFRFPNNGNLYSA-----------PSSQRGRFYL-PC 313
           PI+    S ++ T     NN     R+ N  N  ++           P++ + + YL  C
Sbjct: 185 PITANAVSHRNTTTTTNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKC 244

Query: 312 QLCGRPNHEAPDCWNI----FDXXXXXXXXXXXXXXXRAYTAHTGLFPTPSWIPDSGATD 145
           Q+CG   H A  C  +                     RA  A    + + +W+ DSGAT 
Sbjct: 245 QICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATH 304

Query: 144 HITNDLSHLQF*K-YTGPDQIQMGNGSSIPISNVGSSFLGTPNRKL 10
           HIT+D ++L   + YTG D + + +GS+IPIS+ GS+ L T +R L
Sbjct: 305 HITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPL 350


>dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis thaliana]
          Length = 847

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
 Frame = -1

Query: 456 PISFRTSSSQSETVPARPNNTANTFRFPNNGNLYSA-----------PSSQRGRFYL-PC 313
           PI+    S ++ T     NN     R+ N  N  ++           P++ + + YL  C
Sbjct: 185 PITANAVSHRNTTTTTNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKC 244

Query: 312 QLCGRPNHEAPDCWNI----FDXXXXXXXXXXXXXXXRAYTAHTGLFPTPSWIPDSGATD 145
           Q+CG   H A  C  +                     RA  A    + + +W+ DSGAT 
Sbjct: 245 QICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATH 304

Query: 144 HITNDLSHLQF*K-YTGPDQIQMGNGSSIPISNVGSSFLGTPNRKL 10
           HIT+D ++L   + YTG D + + +GS+IPIS+ GS+ L T +R L
Sbjct: 305 HITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPL 350


>ref|XP_004967136.1| PREDICTED: uncharacterized protein LOC101762311 [Setaria italica]
          Length = 866

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 6/163 (3%)
 Frame = -1

Query: 480 TSYRNSSGPISFRTSSSQSETVPARPNNTANTFRF--PNNGN---LYSAPSSQRGRFYLP 316
           T    SS  I+ R   ++  +   R     N  R    N GN     +  ++Q+G    P
Sbjct: 216 TEQHQSSANIASRGRENRGRSGGRRGGGRTNQGRQMQSNGGNQKFFNAKGNNQQGDKRPP 275

Query: 315 CQLCGRPNHEAPDCWNIFDXXXXXXXXXXXXXXXRAYTAHTGLFPTPSWIPDSGATDHIT 136
           CQ+C + NHEA  C+  ++                AY   T      +W  DSGAT+H+T
Sbjct: 276 CQICKKTNHEAKQCYFRYEEDEQYRGRPNE-----AYGVDT------NWYADSGATNHVT 324

Query: 135 NDLSHLQF*-KYTGPDQIQMGNGSSIPISNVGSSFLGTPNRKL 10
            +L  L    +Y G DQ+   NG+ + ISNVG + + TP+  L
Sbjct: 325 GELEKLSVRDRYNGRDQVNTANGTGMRISNVGHTIVHTPSSNL 367


>ref|XP_004971816.1| PREDICTED: uncharacterized protein LOC101779238, partial [Setaria
           italica]
          Length = 1281

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
 Frame = -1

Query: 318 PCQLCGRPNHEAPDCWNIFDXXXXXXXXXXXXXXXRAYTAHTGLF--PTPSWIPDSGATD 145
           PCQ+CGR  H A  CW + D                  TA T  F    P+W  ++ ATD
Sbjct: 134 PCQICGRVGHTAVKCWYLMDESYQDEQPFA--------TAATTTFYKVDPNWYTNTRATD 185

Query: 144 HITNDLSHLQF-*KYTGPDQIQMGNGSSIPISNVGSSFLGTPNRKL 10
           HIT+DL  L    +Y G + +Q+GNG+ + I ++GS  + T  R L
Sbjct: 186 HITSDLDRLALREQYNGGETVQVGNGAHLHIMHIGSCSINTATRPL 231


>ref|XP_004248587.1| PREDICTED: uncharacterized protein LOC101255439 [Solanum
           lycopersicum]
          Length = 318

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
 Frame = -1

Query: 468 NSSGPISFRTSSSQSETVPARPNNTANTFRFPNNGNLYSAPSS---QRGRFYLPCQLCGR 298
           + SG ++   + +  +   +RP+  +N    P N      P S   +R      CQ+C +
Sbjct: 163 DESGHVTLSANIANRQNFQSRPSYNSNP---PTNQFQQRNPKSHDNKRPSNRPLCQICEK 219

Query: 297 PNHEAPDCWNIFDXXXXXXXXXXXXXXXRAYTAHTGLFPTPSWIPDSGATDHITNDLSHL 118
            +H A +C+N ++                     +  F  PSW  DSGAT+H+T D+ +L
Sbjct: 220 LDHLAKNCYNRYNDQYPPTNTPRPQANV---ATSSSAFLDPSWCLDSGATNHVTADVGNL 276

Query: 117 QF*K-YTGPDQIQMGNGSSIPISNVGSSFLGTPNRKLQ 7
                Y+G D + +GNGS + I++ GSS + +P+R  Q
Sbjct: 277 SIASDYSGNDSLAVGNGSQLHITHFGSSSIPSPSRSFQ 314


>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
           gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1466

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
 Frame = -1

Query: 456 PISFRTSSSQSETVPARPNNTANTFRFPNNGNLYSA-----------PSSQRGRFYL-PC 313
           PI+    S ++ T     NN     R+ N  N  ++           P++ + + YL  C
Sbjct: 220 PITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKC 279

Query: 312 QLCGRPNHEAPDCWNI----FDXXXXXXXXXXXXXXXRAYTAHTGLFPTPSWIPDSGATD 145
           Q+CG   H A  C  +                     RA  A    + + +W+ DSGAT 
Sbjct: 280 QICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATH 339

Query: 144 HITNDLSHLQF*K-YTGPDQIQMGNGSSIPISNVGSSFLGTPNRKL 10
           HIT+D ++L   + YTG D + + +GS+IPIS+ GS+ L T +R L
Sbjct: 340 HITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPL 385


>dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]
          Length = 1048

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
 Frame = -1

Query: 456 PISFRTSSSQSETVPARPNNTANTFRFPNNGNLYSA-----------PSSQRGRFYL-PC 313
           PI+    S ++ T     NN     R+ N  N  ++           P++ + + YL  C
Sbjct: 215 PITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKC 274

Query: 312 QLCGRPNHEAPDCWNI----FDXXXXXXXXXXXXXXXRAYTAHTGLFPTPSWIPDSGATD 145
           Q+CG   H A  C  +                     RA  A    + + +W+ DSGAT 
Sbjct: 275 QICGVQGHSAKRCSQLQHFLSSVNSQQPSSPFTPWQPRANLALGSPYSSNNWLLDSGATH 334

Query: 144 HITNDLSHLQF*K-YTGPDQIQMGNGSSIPISNVGSSFLGTPNRKL 10
           HIT+D ++L   + YTG D + + +GS+IPIS+ GS+ L T +R L
Sbjct: 335 HITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPL 380


>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
 Frame = -1

Query: 456 PISFRTSSSQSETVPARPNNTANTFRFPNNGNLYSA-----------PSSQRGRFYL-PC 313
           PI+    S ++ T     NN     R+ N  N  ++           P++ + + YL  C
Sbjct: 220 PITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKC 279

Query: 312 QLCGRPNHEAPDCWNI----FDXXXXXXXXXXXXXXXRAYTAHTGLFPTPSWIPDSGATD 145
           Q+CG   H A  C  +                     RA  A    + + +W+ DSGAT 
Sbjct: 280 QICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATH 339

Query: 144 HITNDLSHLQF*K-YTGPDQIQMGNGSSIPISNVGSSFLGTPNRKL 10
           HIT+D ++L   + YTG D + + +GS+IPIS+ GS+ L T +R L
Sbjct: 340 HITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPL 385


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 50/174 (28%), Positives = 72/174 (41%), Gaps = 4/174 (2%)
 Frame = -1

Query: 519 NSSRPSGAYISGPTSYRNSSGPISFRTSSSQSETVPARPNNTANTFRFPNNGNLYSAPSS 340
           N S  S + ++     RN+ G  +F                 +N  R    G+       
Sbjct: 215 NGSSGSYSSVNSANHGRNNGGGGNFNNGGGYF----------SNRGRGGGRGDRGGCGRG 264

Query: 339 QRGRFYLP---CQLCGRPNHEAPDCWNIFDXXXXXXXXXXXXXXXRAYTAHTGLFPTPSW 169
             GR + P   CQLC +  H   DCW+ +D                A  A  G+    +W
Sbjct: 265 NGGRNFKPRPTCQLCSKVGHVVADCWHCYDDSFVPDARV-------AAAASYGV--DSNW 315

Query: 168 IPDSGATDHITNDLSHLQF*-KYTGPDQIQMGNGSSIPISNVGSSFLGTPNRKL 10
             D+GATDHITN+L  L    +Y G +QI   +GS + I ++G S + TP R L
Sbjct: 316 YVDTGATDHITNELEKLTTRDRYNGKEQIHTASGSGMDIKHIGQSTIRTPTRNL 369


>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
           gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1466

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
 Frame = -1

Query: 456 PISFRTSSSQSETVPARPNNTANTFRFPNNGNLYSA-----------PSSQRGRFYL-PC 313
           PI+    S ++ T     NN     R+ N  N  ++           P++ + + YL  C
Sbjct: 220 PITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKC 279

Query: 312 QLCGRPNHEAPDCWNI----FDXXXXXXXXXXXXXXXRAYTAHTGLFPTPSWIPDSGATD 145
           Q+CG   H A  C  +                     RA  A    + + +W+ DSGAT 
Sbjct: 280 QICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATH 339

Query: 144 HITNDLSHLQF*K-YTGPDQIQMGNGSSIPISNVGSSFLGTPNRKL 10
           HIT+D ++L   + YTG D + + +GS+IPIS+ GS+ L T +R L
Sbjct: 340 HITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPL 385


>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
           Group] gi|108710062|gb|ABF97857.1| retrotransposon
           protein, putative, Ty1-copia subclass, expressed [Oryza
           sativa Japonica Group]
          Length = 1021

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 52/174 (29%), Positives = 74/174 (42%), Gaps = 1/174 (0%)
 Frame = -1

Query: 528 SSFNSSRPSGAYISGPTSYRNSSGPISFRTSSSQSETVPARPNNTANTFRFPNNGNLYSA 349
           SS N++R  G    G T + N  G      +  +S       N      R  NNG+    
Sbjct: 220 SSVNAARRGGGKGGGYTPF-NRGGRSGGNNNGRRSN------NGGGRGGRGNNNGD---- 268

Query: 348 PSSQRGRFYLPCQLCGRPNHEAPDCWNIFDXXXXXXXXXXXXXXXRAYTAHTGLFPTPSW 169
              + G+ +  C LCG+  H   DCW  +D                A  A  G+    +W
Sbjct: 269 ---RGGKPHPVCHLCGKTGHVVADCWYRYDENFVPENKI-------AAAASYGV--DTNW 316

Query: 168 IPDSGATDHITNDLSHLQF*-KYTGPDQIQMGNGSSIPISNVGSSFLGTPNRKL 10
             D+GATDHIT +L  L    KY G DQI   +G+ + I ++G S + TP R +
Sbjct: 317 YVDTGATDHITGELDKLTTREKYNGKDQIYTASGAGMDIKHIGHSVICTPTRNI 370


>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 60/200 (30%), Positives = 79/200 (39%), Gaps = 2/200 (1%)
 Frame = -1

Query: 600  PRIENQHKTLHTQHVANLAVPARNSSFNSSRPSGAYISGPTSYRNSSGPI-SFRTSSSQS 424
            P  E   + L  +  A L   A  SS NS+R  G    G  S   ++G   +FR      
Sbjct: 1159 PVAEIYTQLLSFESRAKLRQQANGSSVNSARRGGKGGGGGFSNNVNTGNTGAFRGRGGGR 1218

Query: 423  ETVPARPNNTANTFRFPNNGNLYSAPSSQRGRFYLPCQLCGRPNHEAPDCWNIFDXXXXX 244
                 R        RF N       P S        CQLCG+  H   DCW  +D     
Sbjct: 1219 GDRGGRGRGNGGGARFSNK------PRST-------CQLCGKIGHVVADCWYRYD----- 1260

Query: 243  XXXXXXXXXXRAYTAHTGLFPTPSWIPDSGATDHITNDLSHL-QF*KYTGPDQIQMGNGS 67
                       A  A  G+    +W  D+GATDHIT +L  L    KY G +QI   +G+
Sbjct: 1261 --ENFIPDSKTAAAASYGV--DTNWYMDTGATDHITGELDKLTTHEKYNGKEQIHTASGA 1316

Query: 66   SIPISNVGSSFLGTPNRKLQ 7
             + I +VG S + TP   +Q
Sbjct: 1317 GMDIKHVGHSIIHTPICNIQ 1336


>dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 15/167 (8%)
 Frame = -1

Query: 456 PISFRTSSSQSETVPARPNNTANTFRFPNNGNLYSA--PSSQRGRF-------YLP-CQL 307
           PI+    + ++       NN  +   + NN N  ++  PSS   R        YL  CQ+
Sbjct: 220 PITANVVTHRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQI 279

Query: 306 CGRPNHEAPDCWNIFDXXXXXXXXXXXXXXXR----AYTAHTGLFPTPSWIPDSGATDHI 139
           C    H A  C  +                      A  A    +   +W+ DSGAT HI
Sbjct: 280 CSVQGHNAKRCPQLHQFQSTTNQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSGATHHI 339

Query: 138 TNDLSHLQF*K-YTGPDQIQMGNGSSIPISNVGSSFLGTPNRKLQRS 1
           T+D ++L F + YTG D + + +GS+IPI++ GS+ L T +R L  S
Sbjct: 340 TSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLS 386


>dbj|BAM44534.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 15/167 (8%)
 Frame = -1

Query: 456 PISFRTSSSQSETVPARPNNTANTFRFPNNGNLYSA--PSSQRGRF-------YLP-CQL 307
           PI+    + ++       NN  +   + NN N  ++  PSS   R        YL  CQ+
Sbjct: 220 PITANVVTHRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQI 279

Query: 306 CGRPNHEAPDCWNIFDXXXXXXXXXXXXXXXR----AYTAHTGLFPTPSWIPDSGATDHI 139
           C    H A  C  +                      A  A    +   +W+ DSGAT HI
Sbjct: 280 CSVQGHSAKRCPQLHQFQSTTNQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSGATHHI 339

Query: 138 TNDLSHLQF*K-YTGPDQIQMGNGSSIPISNVGSSFLGTPNRKLQRS 1
           T+D ++L F + YTG D + + +GS+IPI++ GS+ L T +R L  S
Sbjct: 340 TSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLS 386