BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00036001
         (649 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004249810.1| PREDICTED: pentatricopeptide repeat-containi...   247   3e-63
ref|XP_006339048.1| PREDICTED: pentatricopeptide repeat-containi...   236   5e-60
ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containi...   216   6e-54
emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]   210   3e-52
ref|XP_006356345.1| PREDICTED: pentatricopeptide repeat-containi...   206   5e-51
ref|XP_004308509.1| PREDICTED: pentatricopeptide repeat-containi...   204   3e-50
ref|XP_004237758.1| PREDICTED: pentatricopeptide repeat-containi...   202   7e-50
ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containi...   202   7e-50
ref|XP_002311462.1| pentatricopeptide repeat-containing family p...   201   1e-49
gb|EXB60277.1| hypothetical protein L484_005875 [Morus notabilis]     201   2e-49
ref|XP_007139632.1| hypothetical protein PHAVU_008G046100g [Phas...   201   2e-49
ref|XP_006397667.1| hypothetical protein EUTSA_v10001725mg [Eutr...   201   2e-49
ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containi...   201   2e-49
ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containi...   201   2e-49
ref|XP_002533966.1| pentatricopeptide repeat-containing protein,...   200   3e-49
gb|EXB37620.1| hypothetical protein L484_021826 [Morus notabilis]     200   4e-49
ref|XP_007156271.1| hypothetical protein PHAVU_003G272400g [Phas...   200   4e-49
ref|XP_004300978.1| PREDICTED: pentatricopeptide repeat-containi...   200   4e-49
ref|XP_004239417.1| PREDICTED: pentatricopeptide repeat-containi...   200   4e-49
ref|XP_006482717.1| PREDICTED: pentatricopeptide repeat-containi...   199   5e-49

>ref|XP_004249810.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum lycopersicum]
          Length = 676

 Score =  247 bits (630), Expect = 3e-63
 Identities = 120/209 (57%), Positives = 160/209 (76%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAK 198
           DM+ A+ +F+++P KD+V W+T+I GYVK GD++LA+  FDEAP KDLL +NT+L   AK
Sbjct: 191 DMRKARDLFEKIPCKDLVIWHTLILGYVKAGDLELAKKYFDEAPVKDLLMYNTILGCLAK 250

Query: 199 HCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGV 378
           + + E +L+ F  MP +D+VSWN+VIGG V++ R+NEAM FF++M+  N+ P+ VTL  +
Sbjct: 251 NGEVECLLRLFREMPCRDLVSWNTVIGGLVRDGRINEAMRFFYEMERVNLSPDDVTLASL 310

Query: 379 LSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDV 558
           LSACAQ GAL+TG+W+H YID+    LN ++ TALVDMYSKCG L SA  VF+ MS+RDV
Sbjct: 311 LSACAQAGALDTGKWLHSYIDRRCSELNAVIGTALVDMYSKCGDLGSAADVFNKMSERDV 370

Query: 559 VTWNAMIMGFSMNGQSKKALELFSRMLDE 645
           V W+AMIMG SMNGQS+ AL  F RM DE
Sbjct: 371 VAWSAMIMGSSMNGQSRTALNFFYRMKDE 399



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 43/157 (27%), Positives = 84/157 (53%), Gaps = 5/157 (3%)
 Frame = +1

Query: 181 LSGYAKHCKTEVVLQF----FESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENV 348
           +  +  HC +  ++ +    F+ MPE +   WN++I G+ QN+     + +F +M+  NV
Sbjct: 46  VGNFITHCASLGLMSYAALLFDQMPEPNSFVWNTLIRGFQQNRAPKYTLYYFDQMRANNV 105

Query: 349 KPNIVTLVGVLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQR 528
           +P+  T    + AC+ +     G  +H  + K   + +V + T+LVD Y+  G L   +R
Sbjct: 106 QPDRFTYPFAIRACSGLLECAKGVSLHGQVVKIGVNFDVFVGTSLVDFYTAMGDLNMTKR 165

Query: 529 VFDLMSDRDVVTWNAMIMGF-SMNGQSKKALELFSRM 636
           VF+ + ++D +TW AM+  + +     +KA +LF ++
Sbjct: 166 VFEELPEKDEITWYAMLSSYVNKFNDMRKARDLFEKI 202



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 42/223 (18%)
 Frame = +1

Query: 37  RIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAKHCKTEV 216
           R+F EMP +D+V+WNT+I G V+ G +  A   F E    +L   +  L+     C    
Sbjct: 259 RLFREMPCRDLVSWNTVIGGLVRDGRINEAMRFFYEMERVNLSPDDVTLASLLSACAQAG 318

Query: 217 VLQ---------------------------------------FFESMPEKDVVSWNSVIG 279
            L                                         F  M E+DVV+W+++I 
Sbjct: 319 ALDTGKWLHSYIDRRCSELNAVIGTALVDMYSKCGDLGSAADVFNKMSERDVVAWSAMIM 378

Query: 280 GYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWIHWYIDKNRFSL 459
           G   N +   A++FF++M+ E+ +PN  T++GVL AC   G ++ G+   +Y     F L
Sbjct: 379 GSSMNGQSRTALNFFYRMKDESERPNDATILGVLCACVHGGLVDEGKKC-FYGMSEEFGL 437

Query: 460 NVML--CTALVDMYSKCGALESAQRVFDLM-SDRDVVTWNAMI 579
              L     +VD+  + G L+ A  +   M  +     W A++
Sbjct: 438 TPKLEHYGCMVDLLGRAGLLDEAYSLIQSMPCEPHTGAWGALL 480



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 54/245 (22%), Positives = 99/245 (40%), Gaps = 40/245 (16%)
 Frame = +1

Query: 22  MKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDE------------------- 144
           M  A  +FD+MP  +   WNT+I G+ +    K     FD+                   
Sbjct: 59  MSYAALLFDQMPEPNSFVWNTLIRGFQQNRAPKYTLYYFDQMRANNVQPDRFTYPFAIRA 118

Query: 145 --------------------APNKDLLTHNTLLSGYAKHCKTEVVLQFFESMPEKDVVSW 264
                                 N D+    +L+  Y       +  + FE +PEKD ++W
Sbjct: 119 CSGLLECAKGVSLHGQVVKIGVNFDVFVGTSLVDFYTAMGDLNMTKRVFEELPEKDEITW 178

Query: 265 NSVIGGYVQN-KRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWIHWYID 441
            +++  YV     + +A   F K+  +++      ++G + A    G LE  +    Y D
Sbjct: 179 YAMLSSYVNKFNDMRKARDLFEKIPCKDLVIWHTLILGYVKA----GDLELAK---KYFD 231

Query: 442 KNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAMIMGFSMNGQSKKALE 621
           +     ++++   ++   +K G +E   R+F  M  RD+V+WN +I G   +G+  +A+ 
Sbjct: 232 EAPVK-DLLMYNTILGCLAKNGEVECLLRLFREMPCRDLVSWNTVIGGLVRDGRINEAMR 290

Query: 622 LFSRM 636
            F  M
Sbjct: 291 FFYEM 295


>ref|XP_006339048.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 680

 Score =  236 bits (602), Expect = 5e-60
 Identities = 116/209 (55%), Positives = 156/209 (74%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAK 198
           DM  A+ +F+++P KD+V W+T+I GYVK GD++LA+  FD AP KDLL +NT+L   AK
Sbjct: 195 DMGKARDLFEKIPCKDLVIWHTLILGYVKAGDLELAKKYFDIAPVKDLLMYNTILGCLAK 254

Query: 199 HCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGV 378
           + + + +L+ F  MP +D+VSWN+VIGG V++ R+NEAM FF++M+  N+ P+ VTL  +
Sbjct: 255 NGEVDRLLRLFHEMPCRDLVSWNTVIGGLVRDGRINEAMRFFYEMERVNLSPDDVTLASL 314

Query: 379 LSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDV 558
           LSACAQ GAL+ G+W+H YID+    LN ++ TALVDMY KCG L SA  VF+ MS+RDV
Sbjct: 315 LSACAQAGALDIGKWLHSYIDRRCSELNAVIGTALVDMYCKCGDLGSAADVFNKMSERDV 374

Query: 559 VTWNAMIMGFSMNGQSKKALELFSRMLDE 645
           V W+AMIMG SMNGQS+ AL  F RM DE
Sbjct: 375 VAWSAMIMGSSMNGQSRTALNFFYRMKDE 403



 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 42/223 (18%)
 Frame = +1

Query: 37  RIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAKHCKTEV 216
           R+F EMP +D+V+WNT+I G V+ G +  A   F E    +L   +  L+     C    
Sbjct: 263 RLFHEMPCRDLVSWNTVIGGLVRDGRINEAMRFFYEMERVNLSPDDVTLASLLSACAQAG 322

Query: 217 VLQF---------------------------------------FESMPEKDVVSWNSVIG 279
            L                                         F  M E+DVV+W+++I 
Sbjct: 323 ALDIGKWLHSYIDRRCSELNAVIGTALVDMYCKCGDLGSAADVFNKMSERDVVAWSAMIM 382

Query: 280 GYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWIHWYIDKNRFSL 459
           G   N +   A++FF++M+ E+  PN  T++GVL AC   G +E G+   +Y     F L
Sbjct: 383 GSSMNGQSRTALNFFYRMKDESETPNDATILGVLCACVHAGLVEEGKKC-FYGMSEEFGL 441

Query: 460 NVML--CTALVDMYSKCGALESAQRVFDLMS-DRDVVTWNAMI 579
              L     +VD+  + G L+ A  +   M  +     W A++
Sbjct: 442 TPKLEHYGCMVDLLGRAGLLDEAYCLIQSMPYEPHTGAWGALL 484



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
 Frame = +1

Query: 163 LTHNTLLSG-YAKHCKT----EVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFH 327
           L H++   G +  HC +        Q F+ M E +   WN++I G+ QN      + +F 
Sbjct: 43  LHHSSFAVGNFITHCASLGLMSYAAQLFDQMSEPNSFVWNTLIRGFQQNHSPKYTLYYFD 102

Query: 328 KMQIENVKPNIVTLVGVLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCG 507
           +M++ N +P+  T    + AC+ +     G  +H  + K   + +V + T+LVD Y+  G
Sbjct: 103 QMRVNNAQPDRFTYPFTIRACSGLLEFAKGASLHGQVVKIGVNFDVFVGTSLVDFYTAMG 162

Query: 508 ALESAQRVFDLMSDRDVVTWNAMIMGF-SMNGQSKKALELFSRM 636
            L   ++VF+ + D+D VTW AM+  + +      KA +LF ++
Sbjct: 163 DLNMTKQVFEELPDKDEVTWYAMLSSYVNKFNDMGKARDLFEKI 206


>ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
           gi|297739328|emb|CBI28979.3| unnamed protein product
           [Vitis vinifera]
          Length = 585

 Score =  216 bits (549), Expect = 6e-54
 Identities = 98/207 (47%), Positives = 154/207 (74%), Gaps = 1/207 (0%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGY-VKIGDMKLARILFDEAPNKDLLTHNTLLSGYA 195
           +M+ AQ +FDEMP +DVV+W+ MI GY  K+G++  AR+ FD  P +DL++ N+++ GYA
Sbjct: 191 EMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYA 250

Query: 196 KHCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVG 375
           K  + EV  + F+ M +K+V+SW+ +I GY Q++   EA++ F +M  + +KP+ V++VG
Sbjct: 251 KVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVG 310

Query: 376 VLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRD 555
            +SAC+Q+GAL+ GRWIH Y+ +NR  L++++ TALVDMY KCG+ + A+R+F+ M +R+
Sbjct: 311 AVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERN 370

Query: 556 VVTWNAMIMGFSMNGQSKKALELFSRM 636
           VV+WN MI+G  MNG  K+ALE F++M
Sbjct: 371 VVSWNVMIVGLGMNGFGKEALECFTQM 397



 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 1/193 (0%)
 Frame = +1

Query: 64  DVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAKHCKTEVVLQFFESMP 243
           DV   N +I+ Y + G+   AR +FD    KDL++ N++L GY    + E     F+ MP
Sbjct: 144 DVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMP 203

Query: 244 EKDVVSWNSVIGGYVQNK-RVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGR 420
           E+DVVSW+ +I GY +    VN A  FF  M   ++                        
Sbjct: 204 ERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDL------------------------ 239

Query: 421 WIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAMIMGFSMNG 600
            + W               +++D Y+K G +E A+ +FD M  ++V++W+ MI G++ + 
Sbjct: 240 -VSW--------------NSMIDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHR 284

Query: 601 QSKKALELFSRML 639
            SK+AL LF +ML
Sbjct: 285 DSKEALNLFRQML 297



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 42/230 (18%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEA------PNK-------- 156
           +M++A+ IFD+M  K+V++W+ MI GY +  D K A  LF +       P++        
Sbjct: 254 EMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVS 313

Query: 157 -------------------------DLLTHNTLLSGYAKHCKTEVVLQFFESMPEKDVVS 261
                                    D++    L+  Y K    +   + F SMPE++VVS
Sbjct: 314 ACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVS 373

Query: 262 WNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWIHWYID 441
           WN +I G   N    EA+  F +M++E +  + +  +GVL AC+    +  G  I   + 
Sbjct: 374 WNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQM- 432

Query: 442 KNRFSLNVML--CTALVDMYSKCGALESAQRVFDLMSDR-DVVTWNAMIM 582
           K  + L   L     LVD+  + G L+  Q +   M  + +   W ++++
Sbjct: 433 KGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLL 482



 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 35/128 (27%), Positives = 66/128 (51%)
 Frame = +1

Query: 265 NSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWIHWYIDK 444
           N+++  Y ++     A+ F+ +M+ + +  +  T   VL AC  +  L  G  +     K
Sbjct: 79  NTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVK 138

Query: 445 NRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAMIMGFSMNGQSKKALEL 624
             F  +V +   L+ MY +CG    A+ VFD  S++D+V+WN+M+ G+   G+ + A  +
Sbjct: 139 RGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNM 198

Query: 625 FSRMLDEE 648
           F  M + +
Sbjct: 199 FDEMPERD 206


>emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
          Length = 585

 Score =  210 bits (535), Expect = 3e-52
 Identities = 96/207 (46%), Positives = 151/207 (72%), Gaps = 1/207 (0%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGY-VKIGDMKLARILFDEAPNKDLLTHNTLLSGYA 195
           +M+ AQ +FDEMP +DVV+W+ MI GY  K+G++  AR+ FD  P +DL++ N+++ GYA
Sbjct: 191 EMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYA 250

Query: 196 KHCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVG 375
           K  + EV  + F+ M +K+V+SW+ +I GY  ++   EA++ F +M  + +KP+ V++VG
Sbjct: 251 KVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVG 310

Query: 376 VLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRD 555
            +SAC+Q+GAL+ GRWIH Y+ +NR  L++++ TALVDMY KCG+ + A+ +F+ M +R+
Sbjct: 311 AVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNSMPERN 370

Query: 556 VVTWNAMIMGFSMNGQSKKALELFSRM 636
           VV+WN MI+G  MNG  K+ALE F +M
Sbjct: 371 VVSWNVMIVGLGMNGFGKEALECFXQM 397



 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 1/193 (0%)
 Frame = +1

Query: 64  DVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAKHCKTEVVLQFFESMP 243
           DV   N +I+ Y + G+   AR +FD    KDL++ N++L GY    + E     F+ MP
Sbjct: 144 DVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMP 203

Query: 244 EKDVVSWNSVIGGYVQNK-RVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGR 420
           E+DVVSW+ +I GY +    VN A  FF  M   ++                        
Sbjct: 204 ERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDL------------------------ 239

Query: 421 WIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAMIMGFSMNG 600
            + W               +++D Y+K G +E A+ +F+ M  ++V++W+ MI G++ + 
Sbjct: 240 -VSW--------------NSMIDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHR 284

Query: 601 QSKKALELFSRML 639
            SK+AL LF +ML
Sbjct: 285 DSKEALNLFRQML 297



 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 42/230 (18%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEA------PNK-------- 156
           +M++A+ IF++M  K+V++W+ MI GY    D K A  LF +       P++        
Sbjct: 254 EMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVGAVS 313

Query: 157 -------------------------DLLTHNTLLSGYAKHCKTEVVLQFFESMPEKDVVS 261
                                    D++    L+  Y K    +     F SMPE++VVS
Sbjct: 314 ACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNSMPERNVVS 373

Query: 262 WNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWIHWYID 441
           WN +I G   N    EA+  F +M++E +  + +  +GVL AC+    +  G  I   + 
Sbjct: 374 WNVMIVGLGMNGFGKEALECFXQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQM- 432

Query: 442 KNRFSLNVML--CTALVDMYSKCGALESAQRVFDLMSDR-DVVTWNAMIM 582
           K  + L   L     LVD+  + G L+  Q +   M  + +   W ++++
Sbjct: 433 KGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLL 482



 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 35/128 (27%), Positives = 66/128 (51%)
 Frame = +1

Query: 265 NSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWIHWYIDK 444
           N+++  Y ++     A+ F+ +M+ + +  +  T   VL AC  +  L  G  +     K
Sbjct: 79  NTMVKCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVK 138

Query: 445 NRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAMIMGFSMNGQSKKALEL 624
             F  +V +   L+ MY +CG    A+ VFD  S++D+V+WN+M+ G+   G+ + A  +
Sbjct: 139 RGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNM 198

Query: 625 FSRMLDEE 648
           F  M + +
Sbjct: 199 FDEMPERD 206


>ref|XP_006356345.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 608

 Score =  206 bits (524), Expect = 5e-51
 Identities = 97/207 (46%), Positives = 145/207 (70%), Gaps = 1/207 (0%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAK 198
           +M+MA+ +F+ MP K+ V+WNTMI+GYVK+GD++ AR +FDE P K +++   ++SGYA 
Sbjct: 212 NMEMARSVFNRMPEKNDVSWNTMISGYVKLGDVETARAIFDEMPEKSIISWTAMVSGYAT 271

Query: 199 HCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIE-NVKPNIVTLVG 375
               +   + F+ +PEK+VVSWN++I GYV N   +EA+S F  M I+ N KPN  TL+ 
Sbjct: 272 SGDVQSARKMFDRIPEKNVVSWNAMIAGYVNNHMFDEALSVFQHMLIDGNCKPNQTTLIS 331

Query: 376 VLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRD 555
           VLSAC+ +G+ E G+WI  +I KN+F L+V L  AL+D ++KCG +E+A+ VF  M+ R 
Sbjct: 332 VLSACSHLGSHEHGKWIDSFIRKNKFDLSVPLGNALIDTFAKCGDMENAKAVFLRMAQRC 391

Query: 556 VVTWNAMIMGFSMNGQSKKALELFSRM 636
           ++TW  MI G + NG  + ALEL+ +M
Sbjct: 392 IITWTTMISGLAANGHCRDALELYEKM 418



 Score =  112 bits (280), Expect = 1e-22
 Identities = 66/192 (34%), Positives = 115/192 (59%), Gaps = 1/192 (0%)
 Frame = +1

Query: 67  VVAWNTMIAGYVKIG-DMKLARILFDEAPNKDLLTHNTLLSGYAKHCKTEVVLQFFESMP 243
           V A NT++  Y K G ++  AR +FDE  ++D+++ NT++  Y  H   E  L  FE+MP
Sbjct: 134 VFAKNTLMDFYAKCGGNLGSARKVFDEMSDRDVVSWNTMIGAYMIHGNQEYALCLFEAMP 193

Query: 244 EKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRW 423
           E++++SWNSVI G ++   +  A S F++M     + N V+   ++S   ++G +ET R 
Sbjct: 194 ERNLISWNSVIAGLLKVGNMEMARSVFNRMP----EKNDVSWNTMISGYVKLGDVETARA 249

Query: 424 IHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAMIMGFSMNGQ 603
           I   + +     +++  TA+V  Y+  G ++SA+++FD + +++VV+WNAMI G+  N  
Sbjct: 250 IFDEMPEK----SIISWTAMVSGYATSGDVQSARKMFDRIPEKNVVSWNAMIAGYVNNHM 305

Query: 604 SKKALELFSRML 639
             +AL +F  ML
Sbjct: 306 FDEALSVFQHML 317



 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 51/140 (36%), Positives = 80/140 (57%), Gaps = 1/140 (0%)
 Frame = +1

Query: 220 LQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQV 399
           L  FE++    ++S+N++I  ++  K +  A+  ++ M++ N+ PN  T   +L      
Sbjct: 54  LHVFENLQNPTLISYNTLIQCFI-GKTLKYALYTYNHMRVSNITPNSFTFTFLLRCFESF 112

Query: 400 GALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGA-LESAQRVFDLMSDRDVVTWNAM 576
            AL+ G  +H  I K  F  +V     L+D Y+KCG  L SA++VFD MSDRDVV+WN M
Sbjct: 113 DALQAGEVVHSQIAKMGFESSVFAKNTLMDFYAKCGGNLGSARKVFDEMSDRDVVSWNTM 172

Query: 577 IMGFSMNGQSKKALELFSRM 636
           I  + ++G  + AL LF  M
Sbjct: 173 IGAYMIHGNQEYALCLFEAM 192



 Score = 83.2 bits (204), Expect = 6e-14
 Identities = 66/260 (25%), Positives = 108/260 (41%), Gaps = 50/260 (19%)
 Frame = +1

Query: 19   DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEA--------------PNK 156
            D++ A+++FD +P K+VV+WN MIAGYV          +FDEA              PN+
Sbjct: 274  DVQSARKMFDRIPEKNVVSWNAMIAGYVN-------NHMFDEALSVFQHMLIDGNCKPNQ 326

Query: 157  DLLTH---------------------------------NTLLSGYAKHCKTEVVLQFFES 237
              L                                   N L+  +AK    E     F  
Sbjct: 327  TTLISVLSACSHLGSHEHGKWIDSFIRKNKFDLSVPLGNALIDTFAKCGDMENAKAVFLR 386

Query: 238  MPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETG 417
            M ++ +++W ++I G   N    +A+  + KM +E V+P+ V  + VLSAC   G LE G
Sbjct: 387  MAQRCIITWTTMISGLAANGHCRDALELYEKMCLEGVEPDDVVFIAVLSACTHRGLLEEG 446

Query: 418  RWIHWYIDKNRFSLNVML--CTALVDMYSKCGALESAQRVFDLMS-DRDVVTWNAMIMGF 588
            + + +Y   N+F +   +     +VD+  + G  E A      M  + +VV W  ++   
Sbjct: 447  KRV-FYQMVNKFGIKPRIEHYGCMVDLLGRAGKFEEALSFIKSMHLEPNVVIWATLLSAC 505

Query: 589  SMNGQSKKALELFSRMLDEE 648
                       L  R+L++E
Sbjct: 506  KTYRNGDLLESLTRRILEQE 525


>ref|XP_004308509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g44880-like [Fragaria vesca subsp. vesca]
          Length = 563

 Score =  204 bits (518), Expect = 3e-50
 Identities = 93/207 (44%), Positives = 147/207 (71%), Gaps = 1/207 (0%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAK 198
           DM  A+R+FDEMP +D  A+N +I GYVK+G+M LAR LFDE  ++++++  +++ GY  
Sbjct: 160 DMGGARRLFDEMPERDSAAFNALIDGYVKVGEMGLARSLFDEMRDRNVVSWTSMIYGYCH 219

Query: 199 HCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIE-NVKPNIVTLVG 375
                    FF+SMP+K++VSWN +IGGY QNK+ +EA+  FH+MQ   +++P+ VT+V 
Sbjct: 220 RGDVGAAKSFFDSMPKKNLVSWNVMIGGYCQNKQPHEAVRLFHEMQSSTSLEPDAVTIVS 279

Query: 376 VLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRD 555
           +L A A +GAL+ G W+H ++++ +      + TALVDMY+KCG +  A+++FD M +++
Sbjct: 280 ILPAIADLGALDLGHWVHEFVERKKLDKLTNIYTALVDMYAKCGEITKARKLFDEMPEKE 339

Query: 556 VVTWNAMIMGFSMNGQSKKALELFSRM 636
             +WNA+I GF++NG  K+ALE+FS M
Sbjct: 340 TASWNALINGFAVNGHGKEALEVFSEM 366



 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 64/221 (28%), Positives = 97/221 (43%), Gaps = 42/221 (19%)
 Frame = +1

Query: 7   HSGTDMKMAQRIFDEMPTKDVVAWNTMIAGYVK--------------------------- 105
           H G D+  A+  FD MP K++V+WN MI GY +                           
Sbjct: 219 HRG-DVGAAKSFFDSMPKKNLVSWNVMIGGYCQNKQPHEAVRLFHEMQSSTSLEPDAVTI 277

Query: 106 ---------IGDMKLARIL--FDEAPNKDLLT--HNTLLSGYAKHCKTEVVLQFFESMPE 246
                    +G + L   +  F E    D LT  +  L+  YAK  +     + F+ MPE
Sbjct: 278 VSILPAIADLGALDLGHWVHEFVERKKLDKLTNIYTALVDMYAKCGEITKARKLFDEMPE 337

Query: 247 KDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWI 426
           K+  SWN++I G+  N    EA+  F +MQ    +PN +T + VLSAC   G +E GR+ 
Sbjct: 338 KETASWNALINGFAVNGHGKEALEVFSEMQRGKYEPNNITFLSVLSACNHCGLVEEGRF- 396

Query: 427 HWYIDKNRFSL--NVMLCTALVDMYSKCGALESAQRVFDLM 543
            W+     F L   +     +VD+  + G LE  +++   M
Sbjct: 397 -WFKKMENFGLIPQIEHYGCMVDLLGRAGCLEETEKLIKSM 436



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
 Frame = +1

Query: 229 FESMPEK-DVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGA 405
           F+  P + D    N++I  ++      E+ + +  ++  + +P+  T   +  +C   GA
Sbjct: 37  FDRQPNRNDTFLCNAIIKAHIAESA--ESFALYRTLRRMDFEPDGYTFTALAKSCGLDGA 94

Query: 406 LETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAMIMG 585
              G  IH +  K    L++ + TA VDMY K G +  A++VFD M++R+ V+W A+I G
Sbjct: 95  RLEGEVIHCHAVKTGLCLDLYVSTAFVDMYVKFGRIGCARKVFDEMTERNRVSWTALICG 154

Query: 586 FSMNGQSKKALELFSRMLDEE 648
           ++  G    A  LF  M + +
Sbjct: 155 YARAGDMGGARRLFDEMPERD 175



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 42/160 (26%), Positives = 75/160 (46%)
 Frame = +1

Query: 157 DLLTHNTLLSGYAKHCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQ 336
           DL      +  Y K  +     + F+ M E++ VSW ++I GY +   +  A   F +M 
Sbjct: 113 DLYVSTAFVDMYVKFGRIGCARKVFDEMTERNRVSWTALICGYARAGDMGGARRLFDEMP 172

Query: 337 IENVKPNIVTLVGVLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALE 516
               + +      ++    +VG +   R +    D+ R   NV+  T+++  Y   G + 
Sbjct: 173 ----ERDSAAFNALIDGYVKVGEMGLARSL---FDEMR-DRNVVSWTSMIYGYCHRGDVG 224

Query: 517 SAQRVFDLMSDRDVVTWNAMIMGFSMNGQSKKALELFSRM 636
           +A+  FD M  +++V+WN MI G+  N Q  +A+ LF  M
Sbjct: 225 AAKSFFDSMPKKNLVSWNVMIGGYCQNKQPHEAVRLFHEM 264


>ref|XP_004237758.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum lycopersicum]
          Length = 616

 Score =  202 bits (514), Expect = 7e-50
 Identities = 97/207 (46%), Positives = 143/207 (69%), Gaps = 1/207 (0%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAK 198
           +M+MA+ +F  MP K+ V+WN MI+GYVK+GD++ AR +FDE P K +++   ++SGYA 
Sbjct: 212 NMEMARSVFKRMPEKNDVSWNMMISGYVKLGDVETARAIFDEMPEKSIISWTAVVSGYAT 271

Query: 199 HCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIE-NVKPNIVTLVG 375
                   + F+ +PEK+VVSWN++I GYV N   +EA+S F  M I+ N KPN  TL+ 
Sbjct: 272 SGDVLSARKMFDRIPEKNVVSWNAMIAGYVNNHMFDEALSVFQLMLIDGNCKPNQTTLIS 331

Query: 376 VLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRD 555
           VLSAC+ +G+ E G+WI  +I KN+F L+V L  AL+D ++KCG +E+A+ VF  M+ R 
Sbjct: 332 VLSACSHLGSHEHGKWIDSFIRKNKFDLSVPLGNALIDTFAKCGDMENAKAVFLRMAQRC 391

Query: 556 VVTWNAMIMGFSMNGQSKKALELFSRM 636
           ++TW  MI G ++NG  K ALEL+ +M
Sbjct: 392 IITWTTMISGLAVNGHCKDALELYEKM 418



 Score =  113 bits (282), Expect = 6e-23
 Identities = 67/209 (32%), Positives = 110/209 (52%)
 Frame = +1

Query: 13  GTDMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGY 192
           G ++  A+++FDEM  +DVV+WNTMI  Y+  G+ + A  LF+  P ++L++ N++++G 
Sbjct: 148 GGNLGSARKVFDEMYERDVVSWNTMIGAYMIHGNQEYALCLFEAMPERNLISWNSVIAGL 207

Query: 193 AKHCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLV 372
            K    E+    F+ MPEK+ VSWN +I GYV+   V  A + F +M  +++        
Sbjct: 208 LKVGNMEMARSVFKRMPEKNDVSWNMMISGYVKLGDVETARAIFDEMPEKSI-------- 259

Query: 373 GVLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDR 552
                            I W              TA+V  Y+  G + SA+++FD + ++
Sbjct: 260 -----------------ISW--------------TAVVSGYATSGDVLSARKMFDRIPEK 288

Query: 553 DVVTWNAMIMGFSMNGQSKKALELFSRML 639
           +VV+WNAMI G+  N    +AL +F  ML
Sbjct: 289 NVVSWNAMIAGYVNNHMFDEALSVFQLML 317



 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 49/140 (35%), Positives = 77/140 (55%), Gaps = 1/140 (0%)
 Frame = +1

Query: 220 LQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQV 399
           L  FES+    ++S+N++I  ++  K    A+  ++ M++ N+ PN  T   +L      
Sbjct: 54  LHVFESLENPTLISYNTLIQCFI-GKTFKYALYTYNHMRVSNITPNSFTFTFLLRCFESF 112

Query: 400 GALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGA-LESAQRVFDLMSDRDVVTWNAM 576
             L+ G  +H  I K  F  +V     L+D Y+KCG  L SA++VFD M +RDVV+WN M
Sbjct: 113 DVLQAGEVVHSQIAKLGFESSVFAKNTLMDFYAKCGGNLGSARKVFDEMYERDVVSWNTM 172

Query: 577 IMGFSMNGQSKKALELFSRM 636
           I  + ++G  + AL LF  M
Sbjct: 173 IGAYMIHGNQEYALCLFEAM 192



 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 65/259 (25%), Positives = 107/259 (41%), Gaps = 49/259 (18%)
 Frame = +1

Query: 19   DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEA--------------PNK 156
            D+  A+++FD +P K+VV+WN MIAGYV          +FDEA              PN+
Sbjct: 274  DVLSARKMFDRIPEKNVVSWNAMIAGYVN-------NHMFDEALSVFQLMLIDGNCKPNQ 326

Query: 157  DLLTH---------------------------------NTLLSGYAKHCKTEVVLQFFES 237
              L                                   N L+  +AK    E     F  
Sbjct: 327  TTLISVLSACSHLGSHEHGKWIDSFIRKNKFDLSVPLGNALIDTFAKCGDMENAKAVFLR 386

Query: 238  MPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETG 417
            M ++ +++W ++I G   N    +A+  + KM +E V+P+ V  + VLSAC   G LE G
Sbjct: 387  MAQRCIITWTTMISGLAVNGHCKDALELYEKMCLEGVEPDDVVFIAVLSACTHGGLLEEG 446

Query: 418  RWIHWY-IDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMS-DRDVVTWNAMIMGFS 591
            + + ++ +DK      +     +VD+  + G  E A      M  + +VV W  ++    
Sbjct: 447  KRVFYHMMDKFGIKPRIEHYGCMVDLLGRAGKFEEALSFIKSMHLEPNVVIWATLLSACK 506

Query: 592  MNGQSKKALELFSRMLDEE 648
                 +    L  R+L++E
Sbjct: 507  TYRNGELLESLTRRILEQE 525


>ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g44880-like [Glycine max]
          Length = 599

 Score =  202 bits (514), Expect = 7e-50
 Identities = 95/209 (45%), Positives = 150/209 (71%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAK 198
           DM  A+R+FDEM  +D+VA+N MI GYVK+G + LAR LF+E   +++++  +++SGY  
Sbjct: 206 DMSEARRLFDEMEDRDIVAFNAMIDGYVKMGCVGLARELFNEMRERNVVSWTSMVSGYCG 265

Query: 199 HCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGV 378
           +   E     F+ MPEK+V +WN++IGGY QN+R ++A+  F +MQ  +V+PN VT+V V
Sbjct: 266 NGDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRRSHDALELFREMQTASVEPNEVTVVCV 325

Query: 379 LSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDV 558
           L A A +GAL+ GRWIH +  + +   +  + TAL+DMY+KCG +  A+  F+ M++R+ 
Sbjct: 326 LPAVADLGALDLGRWIHRFALRKKLDRSARIGTALIDMYAKCGEITKAKLAFEGMTERET 385

Query: 559 VTWNAMIMGFSMNGQSKKALELFSRMLDE 645
            +WNA+I GF++NG +K+ALE+F+RM++E
Sbjct: 386 ASWNALINGFAVNGCAKEALEVFARMIEE 414



 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 63/216 (29%), Positives = 92/216 (42%), Gaps = 41/216 (18%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVK------------------------------- 105
           D++ A+ +FD MP K+V  WN MI GY +                               
Sbjct: 268 DVENAKLMFDLMPEKNVFTWNAMIGGYCQNRRSHDALELFREMQTASVEPNEVTVVCVLP 327

Query: 106 ----IGDMKLARILFDEAPNKDL----LTHNTLLSGYAKHCKTEVVLQFFESMPEKDVVS 261
               +G + L R +   A  K L         L+  YAK  +       FE M E++  S
Sbjct: 328 AVADLGALDLGRWIHRFALRKKLDRSARIGTALIDMYAKCGEITKAKLAFEGMTERETAS 387

Query: 262 WNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWIHWYID 441
           WN++I G+  N    EA+  F +M  E   PN VT++GVLSAC   G +E GR   W+  
Sbjct: 388 WNALINGFAVNGCAKEALEVFARMIEEGFGPNEVTMIGVLSACNHCGLVEEGR--RWFNA 445

Query: 442 KNRFSL--NVMLCTALVDMYSKCGALESAQRVFDLM 543
             RF +   V     +VD+  + G L+ A+ +   M
Sbjct: 446 MERFGIAPQVEHYGCMVDLLGRAGCLDEAENLIQTM 481



 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
 Frame = +1

Query: 223 QFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKM--QIENVKPNIVTLVGVLSACAQ 396
           +FF +   +D    NS+I  +   ++ ++  + F  +  Q     P+  T   ++  CA 
Sbjct: 78  RFFNATHTRDTFLCNSMIAAHFAARQFSQPFTLFRDLRRQAPPFTPDGYTFTALVKGCAT 137

Query: 397 VGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAM 576
             A   G  +H  + KN    ++ + TALVDMY K G L SA++VFD MS R  V+W A+
Sbjct: 138 RVATGEGTLLHGMVLKNGVCFDLYVATALVDMYVKFGVLGSARKVFDEMSVRSKVSWTAV 197

Query: 577 IMGFSMNGQSKKALELFSRMLDEE 648
           I+G++  G   +A  LF  M D +
Sbjct: 198 IVGYARCGDMSEARRLFDEMEDRD 221


>ref|XP_002311462.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222851282|gb|EEE88829.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 538

 Score =  201 bits (512), Expect = 1e-49
 Identities = 95/207 (45%), Positives = 144/207 (69%), Gaps = 1/207 (0%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAK 198
           D+  A+R+FD  P +D+V WNTMI+GY++  D+  AR LFD+ PNKD+++ NT+L+GYA 
Sbjct: 132 DLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSWNTVLNGYAS 191

Query: 199 HCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIE-NVKPNIVTLVG 375
           +       + FE MPE++V SWN++IGGY +N   +E +S F +M ++  V PN  TLV 
Sbjct: 192 NGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVN 251

Query: 376 VLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRD 555
           VLSACA++GAL+ G+W+H Y + + +  NV +  AL+DMY+KCG +E+A  VF  M ++D
Sbjct: 252 VLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNKD 311

Query: 556 VVTWNAMIMGFSMNGQSKKALELFSRM 636
           +++WN +I G +++G    AL LFS M
Sbjct: 312 LISWNTIIGGLAVHGHGADALNLFSHM 338



 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 43/120 (35%), Positives = 72/120 (60%)
 Frame = +1

Query: 229 FESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGAL 408
           F+ +PE +   WN++  GY QN+   + +  F +M+  +V PN  T   +L +C ++ AL
Sbjct: 8   FDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVKINAL 67

Query: 409 ETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAMIMGF 588
           + G  +H ++ K+ F  N  + T L+DMY+  GA+ +A RVF  M +R+V+ W AMI G+
Sbjct: 68  KEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAMINGY 127



 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 42/232 (18%)
 Frame = +1

Query: 10  SGTDMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMK-----LARILFDEA--PNKDLLT 168
           S  D+   +R+F+EMP ++V +WN +I GY + G          R+L D    PN   L 
Sbjct: 191 SNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLV 250

Query: 169 H---------------------------------NTLLSGYAKHCKTEVVLQFFESMPEK 249
           +                                 N L+  YAK    E  L  F+SM  K
Sbjct: 251 NVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNK 310

Query: 250 DVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETG-RWI 426
           D++SWN++IGG   +    +A++ F  M+I    P+ +T +G+L AC  +G +E G  + 
Sbjct: 311 DLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLVEDGFSYF 370

Query: 427 HWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMS-DRDVVTWNAMI 579
               D       +     +VD+  + G L  A      M  + D V W A++
Sbjct: 371 KSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALL 422



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 59/245 (24%), Positives = 100/245 (40%), Gaps = 39/245 (15%)
 Frame = +1

Query: 22  MKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILF------DEAPN--------KD 159
           M+ A ++FD++P  +   WN M  GY +    K   +LF      D  PN        K 
Sbjct: 1   MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60

Query: 160 LLTHNTLLSGYAKHC-------------------------KTEVVLQFFESMPEKDVVSW 264
            +  N L  G   HC                               + F  M E++V++W
Sbjct: 61  CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120

Query: 265 NSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWIHWYIDK 444
            ++I GY+    +  A   F      ++      + G + A   + A E         DK
Sbjct: 121 TAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARE-------LFDK 173

Query: 445 NRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAMIMGFSMNGQSKKALEL 624
              + +VM    +++ Y+  G + + +R+F+ M +R+V +WNA+I G++ NG   + L  
Sbjct: 174 MP-NKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSA 232

Query: 625 FSRML 639
           F RML
Sbjct: 233 FKRML 237


>gb|EXB60277.1| hypothetical protein L484_005875 [Morus notabilis]
          Length = 720

 Score =  201 bits (511), Expect = 2e-49
 Identities = 93/206 (45%), Positives = 144/206 (69%), Gaps = 1/206 (0%)
 Frame = +1

Query: 28  MAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAKHCK 207
           +A  +FDEMP +DVV+WNT++AGY   G +  A+++FD    ++L++ +T++SGYAK   
Sbjct: 238 IAHEMFDEMPVRDVVSWNTLVAGYCLSGRVGDAQVVFDGMVERNLVSWSTMVSGYAKAGH 297

Query: 208 TEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQ-IENVKPNIVTLVGVLS 384
            E   + F+ MPE++V SWN++I GY QN +  EA+  F +MQ +E + PN +TLV VLS
Sbjct: 298 LEEARRLFDEMPERNVGSWNAMIAGYAQNMKYAEAIELFRRMQGVEGLVPNEITLVSVLS 357

Query: 385 ACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVT 564
           ACA +GAL+ GRW+  +I +    L+ +L  ALVDMY+KCG +  A+R+F+ M +RDV++
Sbjct: 358 ACAHLGALDLGRWVDRFIRRKGMELSPLLGNALVDMYAKCGCITEARRIFNTMQERDVIS 417

Query: 565 WNAMIMGFSMNGQSKKALELFSRMLD 642
           W+ +I G +MNG + +ALE F  M++
Sbjct: 418 WSVIITGLAMNGHASEALERFDAMIE 443



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 66/252 (26%), Positives = 117/252 (46%), Gaps = 43/252 (17%)
 Frame = +1

Query: 22   MKMAQRIFDEMPTKDVVAWNTMIAGYVK-------------------------------- 105
            ++ A+R+FDEMP ++V +WN MIAGY +                                
Sbjct: 298  LEEARRLFDEMPERNVGSWNAMIAGYAQNMKYAEAIELFRRMQGVEGLVPNEITLVSVLS 357

Query: 106  ----IGDMKLARILFDEAPNKDL----LTHNTLLSGYAK-HCKTEVVLQFFESMPEKDVV 258
                +G + L R +      K +    L  N L+  YAK  C TE   + F +M E+DV+
Sbjct: 358  ACAHLGALDLGRWVDRFIRRKGMELSPLLGNALVDMYAKCGCITEA-RRIFNTMQERDVI 416

Query: 259  SWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWIHWYI 438
            SW+ +I G   N   +EA+  F  M    ++PN +T +G+L+AC   G ++ G      +
Sbjct: 417  SWSVIITGLAMNGHASEALERFDAMIEHGMRPNDITFMGLLTACTHAGLVDKGLRYFDVM 476

Query: 439  DKNRFSL-NVMLCTALVDMYSKCGALESAQR-VFDLMSDRDVVTWNAMIMGFSMNGQSKK 612
            D+    +  V     +VD+ S+ G L+ A++ +  +    +V+ W A++ G  +   +++
Sbjct: 477  DRTYGIVPKVEHYGCVVDLLSRAGRLDEAEKLIISMPVKSNVIVWGALLGGCRIYKDAER 536

Query: 613  ALELFSRMLDEE 648
               +  R+L+ E
Sbjct: 537  GERIVHRILELE 548



 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 42/158 (26%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
 Frame = +1

Query: 178 LLSGYAKHCKTEVVLQFFES-MPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKP 354
           L+   A H      +Q F   +P  ++ ++N+V+  + Q+   +    +F++  ++   P
Sbjct: 122 LIGVCAAHANVRHGVQIFAHYLPTPNIFAYNAVLKAFAQHNDWDNTFRWFNRQLLDPNAP 181

Query: 355 --NIVTLVGVLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQR 528
             +  +   VL ACA +GA   GR +H  + K     N+ +  +LV  Y + G  + A  
Sbjct: 182 IPDEYSFTSVLKACAGLGAAAEGRKVHCVVTKYGCDGNLFVRNSLVAFYFRIGCFDIAHE 241

Query: 529 VFDLMSDRDVVTWNAMIMGFSMNGQSKKALELFSRMLD 642
           +FD M  RDVV+WN ++ G+ ++G+   A  +F  M++
Sbjct: 242 MFDEMPVRDVVSWNTLVAGYCLSGRVGDAQVVFDGMVE 279


>ref|XP_007139632.1| hypothetical protein PHAVU_008G046100g [Phaseolus vulgaris]
           gi|561012765|gb|ESW11626.1| hypothetical protein
           PHAVU_008G046100g [Phaseolus vulgaris]
          Length = 602

 Score =  201 bits (511), Expect = 2e-49
 Identities = 95/209 (45%), Positives = 149/209 (71%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAK 198
           DM  A+R+FDEM  +DVVA+N MI GY K G + LAR LFD+   K++++  +++SGY  
Sbjct: 208 DMGEARRLFDEMEDRDVVAFNAMIDGYAKTGCVGLARELFDKMGEKNVVSWTSMISGYCG 267

Query: 199 HCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGV 378
           +   E     F++MP+K++ +WN++IGGY QN+R +EA+  F +MQ   V+PN VT++ V
Sbjct: 268 NGDVENARLMFDAMPDKNLFTWNAMIGGYCQNRRSHEALELFREMQTVLVEPNEVTILCV 327

Query: 379 LSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDV 558
           L A A +GAL+ G WIH +  + +F  +  + TAL+DMY+KCG +  A+ VF+ M++R+ 
Sbjct: 328 LPAVADLGALDLGGWIHRFAQRKKFDRSARVGTALIDMYAKCGEITKAKLVFEEMTERET 387

Query: 559 VTWNAMIMGFSMNGQSKKALELFSRMLDE 645
            +WNA+I GF++NG +K+ALE+F+RM++E
Sbjct: 388 ASWNALINGFAVNGCAKEALEVFARMVEE 416



 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 41/216 (18%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEA------PNKDLL----- 165
           D++ A+ +FD MP K++  WN MI GY +      A  LF E       PN+  +     
Sbjct: 270 DVENARLMFDAMPDKNLFTWNAMIGGYCQNRRSHEALELFREMQTVLVEPNEVTILCVLP 329

Query: 166 ----------------------------THNTLLSGYAKHCKTEVVLQFFESMPEKDVVS 261
                                           L+  YAK  +       FE M E++  S
Sbjct: 330 AVADLGALDLGGWIHRFAQRKKFDRSARVGTALIDMYAKCGEITKAKLVFEEMTERETAS 389

Query: 262 WNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWIHWYID 441
           WN++I G+  N    EA+  F +M  E  +PN VT++ VLSAC   G +E GR   W+ +
Sbjct: 390 WNALINGFAVNGCAKEALEVFARMVEEGFRPNEVTMITVLSACNHCGLVEEGR--RWFKE 447

Query: 442 KNRFSL--NVMLCTALVDMYSKCGALESAQRVFDLM 543
             RF +   +     ++D+  + G L+ A+++   M
Sbjct: 448 MERFGIVPEIEHYGCVIDLLGRAGCLDEAEKLIQAM 483



 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
 Frame = +1

Query: 226 FFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIEN--VKPNIVTLVGVLSACAQV 399
           FF+ +  +D    NS+I  +   ++ +E  + F  ++ +     P+  T   ++  C+  
Sbjct: 81  FFDLVRTRDTFLCNSMIATHFAARQFSEPFTLFRDLRRKTPPFTPDGYTFTALVKGCSAR 140

Query: 400 GALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAMI 579
            A   G  +H  + +N    ++ + TALVDMY K G L+SA++VFD MS R  V+W A+I
Sbjct: 141 VATREGPQLHGVVLRNGVCFDLYVATALVDMYVKFGVLDSAKKVFDEMSVRSRVSWTAVI 200

Query: 580 MGFSMNGQSKKALELFSRMLDEE 648
           +G++  G   +A  LF  M D +
Sbjct: 201 VGYARCGDMGEARRLFDEMEDRD 223



 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 67/243 (27%), Positives = 103/243 (42%), Gaps = 41/243 (16%)
 Frame = +1

Query: 31  AQRIFDEMPTKDVVAWNTMIA----------------------------GYVKIGDMK-- 120
           A+  FD + T+D    N+MIA                            GY     +K  
Sbjct: 78  ARSFFDLVRTRDTFLCNSMIATHFAARQFSEPFTLFRDLRRKTPPFTPDGYTFTALVKGC 137

Query: 121 LARILFDEAPNK-----------DLLTHNTLLSGYAKHCKTEVVLQFFESMPEKDVVSWN 267
            AR+   E P             DL     L+  Y K    +   + F+ M  +  VSW 
Sbjct: 138 SARVATREGPQLHGVVLRNGVCFDLYVATALVDMYVKFGVLDSAKKVFDEMSVRSRVSWT 197

Query: 268 SVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWIHWYIDKN 447
           +VI GY +   + EA   F +M+  +V    V    ++   A+ G +   R +    DK 
Sbjct: 198 AVIVGYARCGDMGEARRLFDEMEDRDV----VAFNAMIDGYAKTGCVGLAREL---FDK- 249

Query: 448 RFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAMIMGFSMNGQSKKALELF 627
               NV+  T+++  Y   G +E+A+ +FD M D+++ TWNAMI G+  N +S +ALELF
Sbjct: 250 MGEKNVVSWTSMISGYCGNGDVENARLMFDAMPDKNLFTWNAMIGGYCQNRRSHEALELF 309

Query: 628 SRM 636
             M
Sbjct: 310 REM 312


>ref|XP_006397667.1| hypothetical protein EUTSA_v10001725mg [Eutrema salsugineum]
           gi|557098740|gb|ESQ39120.1| hypothetical protein
           EUTSA_v10001725mg [Eutrema salsugineum]
          Length = 644

 Score =  201 bits (510), Expect = 2e-49
 Identities = 95/211 (45%), Positives = 146/211 (69%), Gaps = 2/211 (0%)
 Frame = +1

Query: 19  DMKMAQRIFDEMP-TKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYA 195
           ++++A ++FDEMP  KDVV  N M+ GYVK GDM  AR LFDE  +K ++T  T++ GY 
Sbjct: 159 ELQVASKLFDEMPQVKDVVICNAMMDGYVKSGDMTSARRLFDEMTDKTVITWTTMIRGYC 218

Query: 196 KHCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIE-NVKPNIVTLV 372
            +   E   + F++MP++++VSWN++IGGY QNK+  EA+  F +MQ   +++P+ VT+V
Sbjct: 219 NNRDIESARELFDAMPQRNLVSWNTMIGGYCQNKQPQEAIRLFQEMQATTSLEPDDVTVV 278

Query: 373 GVLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDR 552
            VL A +  GAL  G W H ++ + +    V +CTA++DMYSKCG +E A+++FD M ++
Sbjct: 279 SVLPAISDTGALSLGEWCHHFVQRKKLDKMVKVCTAILDMYSKCGEIEKARKIFDEMPEK 338

Query: 553 DVVTWNAMIMGFSMNGQSKKALELFSRMLDE 645
           +V +WNAMI G ++NG ++ AL+LF  ML E
Sbjct: 339 EVASWNAMIHGSALNGNARAALDLFLAMLKE 369



 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 67/251 (26%), Positives = 111/251 (44%), Gaps = 42/251 (16%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAP---------------- 150
           D++ A+ +FD MP +++V+WNTMI GY +    + A  LF E                  
Sbjct: 222 DIESARELFDAMPQRNLVSWNTMIGGYCQNKQPQEAIRLFQEMQATTSLEPDDVTVVSVL 281

Query: 151 ------------------------NKDLLTHNTLLSGYAKHCKTEVVLQFFESMPEKDVV 258
                                   +K +     +L  Y+K  + E   + F+ MPEK+V 
Sbjct: 282 PAISDTGALSLGEWCHHFVQRKKLDKMVKVCTAILDMYSKCGEIEKARKIFDEMPEKEVA 341

Query: 259 SWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWIHWYI 438
           SWN++I G   N     A+  F  M ++ VKP+ VT++ VLSAC   G +E GR   W+ 
Sbjct: 342 SWNAMIHGSALNGNARAALDLFLAM-LKEVKPDEVTMLAVLSACNHGGLVEKGR--KWFR 398

Query: 439 DKNRFSL--NVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAMIMGFSMNGQSKK 612
               F L   +     +VD+  + G L+ A+   D++++   V    ++  F       K
Sbjct: 399 VMEEFGLIAKIEHYGCMVDLLGRAGHLKEAE---DVITNMPFVPNGIILSSFLSACGQYK 455

Query: 613 ALELFSRMLDE 645
            +E   R+L++
Sbjct: 456 DIERAERILNK 466



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 44/160 (27%), Positives = 69/160 (43%)
 Frame = +1

Query: 157 DLLTHNTLLSGYAKHCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQ 336
           D+     ++  YAK  K       F+ MP++  VSW ++I GY +   +  A   F +M 
Sbjct: 112 DMYVSTGVVDMYAKFGKMGCARNVFDEMPQRSEVSWTALICGYARCGELQVASKLFDEM- 170

Query: 337 IENVKPNIVTLVGVLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALE 516
                P +                                 +V++C A++D Y K G + 
Sbjct: 171 -----PQV--------------------------------KDVVICNAMMDGYVKSGDMT 193

Query: 517 SAQRVFDLMSDRDVVTWNAMIMGFSMNGQSKKALELFSRM 636
           SA+R+FD M+D+ V+TW  MI G+  N   + A ELF  M
Sbjct: 194 SARRLFDEMTDKTVITWTTMIRGYCNNRDIESARELFDAM 233



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
 Frame = +1

Query: 223 QFFESMPEK-DVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENV-KPNIVTLVGVLSACAQ 396
           + F+  P++ D    NS+I  Y+  ++  ++ + +  ++ E    P+  T   +  +C  
Sbjct: 31  KLFDQRPQREDSFLCNSMIKAYLDTRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCTL 90

Query: 397 VGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAM 576
              +  G  +H  I ++ F  ++ + T +VDMY+K G +  A+ VFD M  R  V+W A+
Sbjct: 91  SMCVYQGLQLHGQIWRSGFCADMYVSTGVVDMYAKFGKMGCARNVFDEMPQRSEVSWTAL 150

Query: 577 IMGFSMNGQSKKALELFSRM 636
           I G++  G+ + A +LF  M
Sbjct: 151 ICGYARCGELQVASKLFDEM 170


>ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like, partial [Cucumis sativus]
          Length = 610

 Score =  201 bits (510), Expect = 2e-49
 Identities = 98/204 (48%), Positives = 137/204 (67%), Gaps = 1/204 (0%)
 Frame = +1

Query: 28  MAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAKHCK 207
           +A+R+FD  P +DVV WN M++GY++IGDMK AR LFD  P +D ++ NT+L+GYA +  
Sbjct: 207 LARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGD 266

Query: 208 TEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIEN-VKPNIVTLVGVLS 384
            E   Q FE MPE++V SWN +IGGY  N    E +  F +M I+  V PN  TLV VLS
Sbjct: 267 VEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLS 326

Query: 385 ACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVT 564
           ACA++GAL+ G+W+H Y     F  ++ +  AL+DMYSKCG +E+A  VF+ M  +D++T
Sbjct: 327 ACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLIT 386

Query: 565 WNAMIMGFSMNGQSKKALELFSRM 636
           WN+MI G + +G    AL LF +M
Sbjct: 387 WNSMICGLATHGCGADALTLFHQM 410



 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 46/133 (34%), Positives = 71/133 (53%)
 Frame = +1

Query: 229 FESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGAL 408
           F+  P+  V  WN++  GY  N    E +  F KM+  +V+PN  T   VL +CA++GA 
Sbjct: 80  FDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAF 139

Query: 409 ETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAMIMGF 588
             G  IH  + K     N  + T L+D+YS   A+ SA ++F  M +R++V W +MI G+
Sbjct: 140 VEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGY 199

Query: 589 SMNGQSKKALELF 627
            +  +   A  LF
Sbjct: 200 ILCNRVALARRLF 212



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 42/229 (18%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMK-----LARILFDE--APNKDLLTH-- 171
           D++  +++F+EMP ++V +WN +I GY   G          R+L D    PN   L    
Sbjct: 266 DVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVL 325

Query: 172 -------------------------------NTLLSGYAKHCKTEVVLQFFESMPEKDVV 258
                                          N L+  Y+K    E  ++ FESM  KD++
Sbjct: 326 SACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLI 385

Query: 259 SWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETG-RWIHWY 435
           +WNS+I G   +    +A++ FH+M+I   KP+ +T +GVL +C  +G +E G  + +  
Sbjct: 386 TWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSM 445

Query: 436 IDKNRFSLNVMLCTALVDMYSKCGALESA-QRVFDLMSDRDVVTWNAMI 579
           +++   +  +     +VD++ + G L+ A + V  +  + D V W A++
Sbjct: 446 VNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALL 494


>ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 652

 Score =  201 bits (510), Expect = 2e-49
 Identities = 98/204 (48%), Positives = 137/204 (67%), Gaps = 1/204 (0%)
 Frame = +1

Query: 28  MAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAKHCK 207
           +A+R+FD  P +DVV WN M++GY++IGDMK AR LFD  P +D ++ NT+L+GYA +  
Sbjct: 249 LARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGD 308

Query: 208 TEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIEN-VKPNIVTLVGVLS 384
            E   Q FE MPE++V SWN +IGGY  N    E +  F +M I+  V PN  TLV VLS
Sbjct: 309 VEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLS 368

Query: 385 ACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVT 564
           ACA++GAL+ G+W+H Y     F  ++ +  AL+DMYSKCG +E+A  VF+ M  +D++T
Sbjct: 369 ACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLIT 428

Query: 565 WNAMIMGFSMNGQSKKALELFSRM 636
           WN+MI G + +G    AL LF +M
Sbjct: 429 WNSMICGLATHGCGADALTLFHQM 452



 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 46/133 (34%), Positives = 71/133 (53%)
 Frame = +1

Query: 229 FESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGAL 408
           F+  P+  V  WN++  GY  N    E +  F KM+  +V+PN  T   VL +CA++GA 
Sbjct: 122 FDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAF 181

Query: 409 ETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAMIMGF 588
             G  IH  + K     N  + T L+D+YS   A+ SA ++F  M +R++V W +MI G+
Sbjct: 182 VEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGY 241

Query: 589 SMNGQSKKALELF 627
            +  +   A  LF
Sbjct: 242 ILCNRVALARRLF 254



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 42/229 (18%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMK-----LARILFDE--APNKDLLTH-- 171
           D++  +++F+EMP ++V +WN +I GY   G          R+L D    PN   L    
Sbjct: 308 DVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVL 367

Query: 172 -------------------------------NTLLSGYAKHCKTEVVLQFFESMPEKDVV 258
                                          N L+  Y+K    E  ++ FESM  KD++
Sbjct: 368 SACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLI 427

Query: 259 SWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETG-RWIHWY 435
           +WNS+I G   +    +A++ FH+M+I   KP+ +T +GVL +C  +G +E G  + +  
Sbjct: 428 TWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSM 487

Query: 436 IDKNRFSLNVMLCTALVDMYSKCGALESA-QRVFDLMSDRDVVTWNAMI 579
           +++   +  +     +VD++ + G L+ A + V  +  + D V W A++
Sbjct: 488 VNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALL 536


>ref|XP_002533966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526049|gb|EEF28413.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 515

 Score =  200 bits (509), Expect = 3e-49
 Identities = 97/209 (46%), Positives = 143/209 (68%), Gaps = 1/209 (0%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAK 198
           D++ A+R+F+  P +DVV WN MI+GY+ IGD+  A+ LF + PNKD+++ NTLL+GYA 
Sbjct: 245 DIETARRLFELAPQRDVVLWNIMISGYIDIGDLVRAQELFHKMPNKDVMSWNTLLNGYAN 304

Query: 199 HCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIEN-VKPNIVTLVG 375
               E   + FE MPE++V SWN +IGGY  +    E +S F +M ++  V PN  TLV 
Sbjct: 305 GGDIEACERLFEEMPERNVFSWNGLIGGYAHHGCFLEVLSSFKRMLVDGIVVPNDATLVT 364

Query: 376 VLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRD 555
           VLSACA++GAL+ G+W+H Y   N +  NV +  AL+DMY+KCG +E+A  VF  +  +D
Sbjct: 365 VLSACARLGALDLGKWVHMYAQSNGYKGNVYIGNALIDMYAKCGNVENAIVVFKSLDKKD 424

Query: 556 VVTWNAMIMGFSMNGQSKKALELFSRMLD 642
           +++WN +I G +++G++  AL LFSRM D
Sbjct: 425 LISWNTLIGGLAVHGRAADALYLFSRMKD 453



 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 44/150 (29%), Positives = 79/150 (52%)
 Frame = +1

Query: 178 LLSGYAKHCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPN 357
           +++ +A   +     + F+ +PE +V +WN+++ GY  N    E +  F KM   ++ PN
Sbjct: 104 IITSFALFKRMRHAHKLFDQIPEPNVSNWNAMLKGYSLNDSHREVIVLFRKMISMDILPN 163

Query: 358 IVTLVGVLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFD 537
             +   V+ +  ++ A + G  +H ++ K+    N  + T L+D+YS    + SA RVF 
Sbjct: 164 CFSFPIVIKSSVKINAFKEGEELHCFVIKSGCRANPFVGTMLIDLYSSGRMIVSAYRVFG 223

Query: 538 LMSDRDVVTWNAMIMGFSMNGQSKKALELF 627
            M +R+VV W +MI GF +    + A  LF
Sbjct: 224 EMIERNVVAWTSMIKGFILCNDIETARRLF 253



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 40/176 (22%)
 Frame = +1

Query: 10  SGTDMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDM-----KLARILFDE--APNKDLLT 168
           +G D++  +R+F+EMP ++V +WN +I GY   G          R+L D    PN   L 
Sbjct: 304 NGGDIEACERLFEEMPERNVFSWNGLIGGYAHHGCFLEVLSSFKRMLVDGIVVPNDATLV 363

Query: 169 H---------------------------------NTLLSGYAKHCKTEVVLQFFESMPEK 249
                                             N L+  YAK    E  +  F+S+ +K
Sbjct: 364 TVLSACARLGALDLGKWVHMYAQSNGYKGNVYIGNALIDMYAKCGNVENAIVVFKSLDKK 423

Query: 250 DVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETG 417
           D++SWN++IGG   + R  +A+  F +M+    KP+ +T +GVL AC  +G ++ G
Sbjct: 424 DLISWNTLIGGLAVHGRAADALYLFSRMKDAGEKPDGITFLGVLCACTHMGLVDDG 479



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 39/245 (15%)
 Frame = +1

Query: 22  MKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTH---------- 171
           M+ A ++FD++P  +V  WN M+ GY      +   +LF +  + D+L +          
Sbjct: 114 MRHAHKLFDQIPEPNVSNWNAMLKGYSLNDSHREVIVLFRKMISMDILPNCFSFPIVIKS 173

Query: 172 ----NTLLSGYAKHC-------------------------KTEVVLQFFESMPEKDVVSW 264
               N    G   HC                               + F  M E++VV+W
Sbjct: 174 SVKINAFKEGEELHCFVIKSGCRANPFVGTMLIDLYSSGRMIVSAYRVFGEMIERNVVAW 233

Query: 265 NSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWIHWYIDK 444
            S+I G++    +  A   F      +V    + + G +     V A E     H   +K
Sbjct: 234 TSMIKGFILCNDIETARRLFELAPQRDVVLWNIMISGYIDIGDLVRAQEL---FHKMPNK 290

Query: 445 NRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAMIMGFSMNGQSKKALEL 624
           +  S N +L     + Y+  G +E+ +R+F+ M +R+V +WN +I G++ +G   + L  
Sbjct: 291 DVMSWNTLL-----NGYANGGDIEACERLFEEMPERNVFSWNGLIGGYAHHGCFLEVLSS 345

Query: 625 FSRML 639
           F RML
Sbjct: 346 FKRML 350


>gb|EXB37620.1| hypothetical protein L484_021826 [Morus notabilis]
          Length = 594

 Score =  200 bits (508), Expect = 4e-49
 Identities = 95/211 (45%), Positives = 149/211 (70%), Gaps = 2/211 (0%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAK 198
           DM  A+++FDEMP KD   +N MI GY K+GD+  AR LF+E  +++L++  +++ GY  
Sbjct: 200 DMINARKLFDEMPEKDSAIYNAMIDGYAKLGDIGSARDLFEEMKDRNLVSWTSMIYGYC- 258

Query: 199 HCKTEVVLQ-FFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENV-KPNIVTLV 372
           HC   +  +  F++MPEK+++SWN++I GY QN +  EA+  F +MQ   + +PN VT+V
Sbjct: 259 HCGDLLSARSLFDAMPEKNLISWNTMISGYCQNNQPLEALKLFREMQDSTLLEPNEVTIV 318

Query: 373 GVLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDR 552
            +L A A +GAL+ G WIH ++ K RF   V +CTAL+DMY+KCG +E A+ +FD M ++
Sbjct: 319 SILPAIADLGALDLGCWIHQFVQKKRFDGLVKICTALIDMYAKCGEVEKAKTIFDEMPEK 378

Query: 553 DVVTWNAMIMGFSMNGQSKKALELFSRMLDE 645
           ++ +WNA+I GF++NG+ ++AL+LFS M D+
Sbjct: 379 EIASWNALINGFAVNGRGEEALQLFSEMQDK 409



 Score =  100 bits (249), Expect = 4e-19
 Identities = 67/219 (30%), Positives = 99/219 (45%), Gaps = 40/219 (18%)
 Frame = +1

Query: 7   HSGTDMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHN---- 174
           H G D+  A+ +FD MP K++++WNTMI+GY +      A  LF E  +  LL  N    
Sbjct: 259 HCG-DLLSARSLFDAMPEKNLISWNTMISGYCQNNQPLEALKLFREMQDSTLLEPNEVTI 317

Query: 175 ------------------------------------TLLSGYAKHCKTEVVLQFFESMPE 246
                                                L+  YAK  + E     F+ MPE
Sbjct: 318 VSILPAIADLGALDLGCWIHQFVQKKRFDGLVKICTALIDMYAKCGEVEKAKTIFDEMPE 377

Query: 247 KDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWI 426
           K++ SWN++I G+  N R  EA+  F +MQ +N KPN +T++GVLSA    G +E GR  
Sbjct: 378 KEIASWNALINGFAVNGRGEEALQLFSEMQDKNPKPNDITMLGVLSASNHSGLVEEGRRC 437

Query: 427 HWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLM 543
              ++       +     +VD+  K G LE A+ +   M
Sbjct: 438 FKAMEGFGLIPQIEHYGCMVDLLGKAGCLEEAENLIKSM 476



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
 Frame = +1

Query: 229 FESMPEKD-VVSWNSVIGGYVQNKRVNEAMSFFHKMQIENV-KPNIVTLVGVLSACAQVG 402
           F+  P++D     N +I  ++  ++  E+ + +  ++      PN  T V ++ +C    
Sbjct: 74  FDRRPQRDDSFLCNCMIKAHMGLRQFAESFALYRDLRRGTCFVPNNYTFVVLVKSCGLNV 133

Query: 403 ALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAMIM 582
           A++ G+ I  ++ K  F  ++ + TALVDMY+K G    A+ +FD MS R  V+W A+I 
Sbjct: 134 AIKEGQEIRCHVLKTGFCSDLYVGTALVDMYAKFGETGYARMLFDEMSARSQVSWTALIC 193

Query: 583 GFSMNGQSKKALELFSRMLDEE 648
           G+  +     A +LF  M +++
Sbjct: 194 GYVRSRDMINARKLFDEMPEKD 215


>ref|XP_007156271.1| hypothetical protein PHAVU_003G272400g [Phaseolus vulgaris]
           gi|561029625|gb|ESW28265.1| hypothetical protein
           PHAVU_003G272400g [Phaseolus vulgaris]
          Length = 618

 Score =  200 bits (508), Expect = 4e-49
 Identities = 95/216 (43%), Positives = 142/216 (65%), Gaps = 10/216 (4%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAK 198
           DM  A+R+FD  P +DVV WN +++GY+++GDM  AR LFD+ PN+D+++ NT+L+GYA 
Sbjct: 203 DMASARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARALFDKMPNRDVMSWNTVLNGYAY 262

Query: 199 HCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQI----------ENV 348
           +   E   Q F+ MP ++V SWN +IGGYV+N   NEA+  F +M +            V
Sbjct: 263 NGDVESFEQLFDEMPARNVYSWNGLIGGYVRNGLFNEALECFKRMLMLAKQEGEGGDVVV 322

Query: 349 KPNIVTLVGVLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQR 528
            PN  T+V VLSAC+++G LE G+W+H Y +   +  N+ +  AL+DMY+KCG +E A  
Sbjct: 323 VPNDYTVVAVLSACSRLGDLEMGKWVHVYAESIGYKENLFVGNALIDMYAKCGVIEKALD 382

Query: 529 VFDLMSDRDVVTWNAMIMGFSMNGQSKKALELFSRM 636
           VF+ +  +D++TWN +I G +M+G +  AL LF RM
Sbjct: 383 VFNCLDVKDIITWNTVINGLAMHGHAADALSLFERM 418



 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 58/239 (24%), Positives = 110/239 (46%), Gaps = 52/239 (21%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVK------------------------------- 105
           D++  +++FDEMP ++V +WN +I GYV+                               
Sbjct: 265 DVESFEQLFDEMPARNVYSWNGLIGGYVRNGLFNEALECFKRMLMLAKQEGEGGDVVVVP 324

Query: 106 --------------IGDMKLARILFDEAPN----KDLLTHNTLLSGYAKHCKTEVVLQFF 231
                         +GD+++ + +   A +    ++L   N L+  YAK    E  L  F
Sbjct: 325 NDYTVVAVLSACSRLGDLEMGKWVHVYAESIGYKENLFVGNALIDMYAKCGVIEKALDVF 384

Query: 232 ESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALE 411
             +  KD+++WN+VI G   +    +A+S F +M+    KP+ VT VG+LSAC  +G ++
Sbjct: 385 NCLDVKDIITWNTVINGLAMHGHAADALSLFERMKSAGEKPDGVTFVGILSACTHMGLVK 444

Query: 412 TGRWIHWYIDKNRFSL--NVMLCTALVDMYSKCGALESA-QRVFDLMSDRDVVTWNAMI 579
            G ++H++   + +S+   +     +VD+  + G ++ A   V  +    D + W A++
Sbjct: 445 DG-FLHFHSMVDNYSIVPQIEHYGCMVDLLGRAGLIDQAVDFVRKMPMKPDAIIWAALL 502



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 45/169 (26%), Positives = 69/169 (40%), Gaps = 33/169 (19%)
 Frame = +1

Query: 229 FESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGAL 408
           F+   + +  +WNS+  G+   +   + +  F +M      PN  T   V+ +CAQ  A+
Sbjct: 77  FDRTAQPNGATWNSMFQGFALLESPFDVVVLFAQMHRAGASPNCFTFPMVVKSCAQANAV 136

Query: 409 ETGRWIHWYIDKNRFSLNVMLCTALVDMYS------------------------------ 498
             G  +H  + K  F  N  + TAL+ MYS                              
Sbjct: 137 REGEQVHCVVAKRGFKSNSFVGTALIHMYSARGEVSVGDAYKVFGEMREKNVFAWTAIIA 196

Query: 499 ---KCGALESAQRVFDLMSDRDVVTWNAMIMGFSMNGQSKKALELFSRM 636
               C  + SA+R+FDL   RDVV WN ++ G+   G    A  LF +M
Sbjct: 197 AHVACRDMASARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARALFDKM 245


>ref|XP_004300978.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 590

 Score =  200 bits (508), Expect = 4e-49
 Identities = 94/207 (45%), Positives = 140/207 (67%), Gaps = 1/207 (0%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAK 198
           DM  AQR+FD  P +D+V WNTM++GY+++GDM+ AR LFD+ P +D++  NT+L+GYA 
Sbjct: 184 DMVSAQRLFDLAPERDIVLWNTMVSGYIELGDMRTARKLFDKMPRRDVICWNTVLNGYAS 243

Query: 199 HCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIEN-VKPNIVTLVG 375
           +   E     FE MPE++V SWN ++GGY +  R    +  F +M  E+ V PN  TL  
Sbjct: 244 NQDIEACEDLFEKMPERNVFSWNGLMGGYARKGRFIAVLGSFKQMLTESKVLPNDATLTT 303

Query: 376 VLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRD 555
           VLSACA++GAL+ G+W+H Y +   +  NV +  AL+DMY+KCG +++A  VF  M  +D
Sbjct: 304 VLSACARLGALDLGKWVHVYAENIGYKRNVYVGNALIDMYAKCGGVDNAVDVFKNMEMKD 363

Query: 556 VVTWNAMIMGFSMNGQSKKALELFSRM 636
           ++TWN +I G + +G+   AL+LFS+M
Sbjct: 364 LITWNTIICGLATHGRGGDALKLFSQM 390



 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 31/169 (18%)
 Frame = +1

Query: 223 QFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVG 402
           Q F+ +PE +   WN+++ GY +N+   E ++ F +M+  ++ PN  T   V+  C ++G
Sbjct: 58  QVFDQIPEPNFALWNALLRGYARNEGHREVVALFCRMKNMDIMPNCYTFPVVIKCCGRLG 117

Query: 403 ALETGRWIHWYIDKNRFSLNVMLCTALVDMYSK--------------------------- 501
            L  G  +H    K  F  N  + T L++MY+                            
Sbjct: 118 RLVEGEEVHCVAIKCGFRANPFVGTTLIEMYAAGGVIGAAYKAFGEMFERNVIAWTSMIN 177

Query: 502 ----CGALESAQRVFDLMSDRDVVTWNAMIMGFSMNGQSKKALELFSRM 636
               CG + SAQR+FDL  +RD+V WN M+ G+   G  + A +LF +M
Sbjct: 178 GYILCGDMVSAQRLFDLAPERDIVLWNTMVSGYIELGDMRTARKLFDKM 226



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 52/232 (22%), Positives = 105/232 (45%), Gaps = 42/232 (18%)
 Frame = +1

Query: 10  SGTDMKMAQRIFDEMPTKDVVAWNTMIAGYVK---------------------------- 105
           S  D++  + +F++MP ++V +WN ++ GY +                            
Sbjct: 243 SNQDIEACEDLFEKMPERNVFSWNGLMGGYARKGRFIAVLGSFKQMLTESKVLPNDATLT 302

Query: 106 --------IGDMKLARILFDEAPN----KDLLTHNTLLSGYAKHCKTEVVLQFFESMPEK 249
                   +G + L + +   A N    +++   N L+  YAK    +  +  F++M  K
Sbjct: 303 TVLSACARLGALDLGKWVHVYAENIGYKRNVYVGNALIDMYAKCGGVDNAVDVFKNMEMK 362

Query: 250 DVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETG-RWI 426
           D+++WN++I G   + R  +A+  F +M+   +KP+ +T +G+L +C  +G +E G  + 
Sbjct: 363 DLITWNTIICGLATHGRGGDALKLFSQMKSCKLKPDGITFIGILCSCTHLGLVEDGLSYF 422

Query: 427 HWYIDKNRFSLNVMLCTALVDMYSKCGALESA-QRVFDLMSDRDVVTWNAMI 579
              +        +     +VD+  + G LE A + V  +  + DVV W A++
Sbjct: 423 QSMVSDYSIVPQIEHYGCMVDLLGRAGLLEQAVEFVRQMPIEADVVIWTALL 474


>ref|XP_004239417.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Solanum lycopersicum]
          Length = 621

 Score =  200 bits (508), Expect = 4e-49
 Identities = 97/207 (46%), Positives = 136/207 (65%), Gaps = 1/207 (0%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGYAK 198
           D+  A+ +FD  P +DVV WN MI GY++  DM+ AR LFD  PNKDL++ NTLL+GYA 
Sbjct: 218 DLVSARMLFDLAPERDVVLWNRMITGYIECRDMEEARKLFDVMPNKDLMSWNTLLNGYAN 277

Query: 199 HCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIE-NVKPNIVTLVG 375
           +   E     FE M E+++ SWN +IGGY  N R  E +S F +M  E +VKPN  TLV 
Sbjct: 278 NGDVEGCENLFEEMKERNIFSWNGLIGGYAHNGRFTEVISAFKRMLNESDVKPNDATLVN 337

Query: 376 VLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRD 555
           VLSAC ++GAL+ G+W+H Y + N +  NV +   L+DMY+KCG + +A  VF  M  RD
Sbjct: 338 VLSACTRLGALDLGKWVHVYAESNGYKHNVYVANGLIDMYAKCGLVGNAVDVFRSMDKRD 397

Query: 556 VVTWNAMIMGFSMNGQSKKALELFSRM 636
           +++WN +I G +++G+   AL LF+ M
Sbjct: 398 LISWNTIINGLAVHGRGSDALSLFAEM 424



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
 Frame = +1

Query: 178 LLSGYAKHCKTEVVLQFFESMPE-KDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKP 354
           LLS   +  K     Q F+ +P+ +D   WN +  GY+QN    + +  F +M  E+V  
Sbjct: 76  LLSKCMEFKKISYAHQVFDQIPDLQDASPWNIMFKGYIQNDMYRDVVVSFRRMMNEDVSL 135

Query: 355 NIVTLVGVLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVF 534
           N  +   VL +C ++ AL  G  +H  + K  F  N  + + L+DMYS  G ++ A RVF
Sbjct: 136 NCFSFPMVLKSCGKLLALVEGEEVHGVVVKVGFLTNTFVGSTLIDMYSSVGRVKCAYRVF 195

Query: 535 DLMSDRDVVTWNAMIMGFSMNGQSKKALELF 627
           + M  R+V TW +MI G+  NG    A  LF
Sbjct: 196 NEMVLRNVFTWTSMINGYIANGDLVSARMLF 226



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 43/230 (18%)
 Frame = +1

Query: 19  DMKMAQRIFDEMPTKDVVAWNTMIAGY---------------------VKIGDMKLARIL 135
           D++  + +F+EM  +++ +WN +I GY                     VK  D  L  +L
Sbjct: 280 DVEGCENLFEEMKERNIFSWNGLIGGYAHNGRFTEVISAFKRMLNESDVKPNDATLVNVL 339

Query: 136 F-------------------DEAPNKDLLTHNTLLSGYAKHCKTEVVLQFFESMPEKDVV 258
                                     ++   N L+  YAK       +  F SM ++D++
Sbjct: 340 SACTRLGALDLGKWVHVYAESNGYKHNVYVANGLIDMYAKCGLVGNAVDVFRSMDKRDLI 399

Query: 259 SWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWIHWYI 438
           SWN++I G   + R ++A+S F +M+   V+P+ +T +GVL AC+ +G +  G + H+  
Sbjct: 400 SWNTIINGLAVHGRGSDALSLFAEMKNSGVEPDGITFIGVLCACSHMGLVADG-FAHFNT 458

Query: 439 DKNRFSLNVML--CTALVDMYSKCGALESAQRVFDLMS-DRDVVTWNAMI 579
             N +S+   +     +VD+  + G LE A +  + M    D V W A++
Sbjct: 459 MANDYSITPKIEHYGCMVDLLGRAGLLEQAVKFVEKMPVQADAVIWTALL 508



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 51/245 (20%), Positives = 105/245 (42%), Gaps = 40/245 (16%)
 Frame = +1

Query: 31  AQRIFDEMPT-KDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDL--------------- 162
           A ++FD++P  +D   WN M  GY++    +   + F    N+D+               
Sbjct: 89  AHQVFDQIPDLQDASPWNIMFKGYIQNDMYRDVVVSFRRMMNEDVSLNCFSFPMVLKSCG 148

Query: 163 --------------------LTH----NTLLSGYAKHCKTEVVLQFFESMPEKDVVSWNS 270
                               LT+    +TL+  Y+   + +   + F  M  ++V +W S
Sbjct: 149 KLLALVEGEEVHGVVVKVGFLTNTFVGSTLIDMYSSVGRVKCAYRVFNEMVLRNVFTWTS 208

Query: 271 VIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWIHWYIDKNR 450
           +I GY+ N  +  A   F        + ++V    +++   +   +E  R +   +    
Sbjct: 209 MINGYIANGDLVSARMLFDLAP----ERDVVLWNRMITGYIECRDMEEARKLFDVMPNK- 263

Query: 451 FSLNVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAMIMGFSMNGQSKKALELFS 630
              ++M    L++ Y+  G +E  + +F+ M +R++ +WN +I G++ NG+  + +  F 
Sbjct: 264 ---DLMSWNTLLNGYANNGDVEGCENLFEEMKERNIFSWNGLIGGYAHNGRFTEVISAFK 320

Query: 631 RMLDE 645
           RML+E
Sbjct: 321 RMLNE 325


>ref|XP_006482717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Citrus sinensis]
          Length = 614

 Score =  199 bits (507), Expect = 5e-49
 Identities = 92/211 (43%), Positives = 143/211 (67%)
 Frame = +1

Query: 13  GTDMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTHNTLLSGY 192
           G ++  A+R+FDEMP +D V+WNT++ GY K G+M LA  LF++ P++++++ +T++ GY
Sbjct: 205 GEELSEARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMIWGY 264

Query: 193 AKHCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLV 372
           +K    E+    F+ MP K +V W  +I GY +     EA   + +M+   +KP+  TL+
Sbjct: 265 SKDADMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLI 324

Query: 373 GVLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGALESAQRVFDLMSDR 552
            +L+ACA+ G L  G  +H  I+K RF  N  +C ALVDMY+KCG+L++A  VF+ M+ +
Sbjct: 325 SILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKK 384

Query: 553 DVVTWNAMIMGFSMNGQSKKALELFSRMLDE 645
           D+V+WNAM+ G +M+GQ +KAL LFSRM DE
Sbjct: 385 DLVSWNAMLYGLAMHGQGEKALGLFSRMKDE 415



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 41/249 (16%)
 Frame = +1

Query: 19   DMKMAQRIFDEMPTKDVVAWNTMIAGYVKIGDMKLARILFDEAPNKDLLTH--------- 171
            DM+MA+ +FD MP K +V W  +I+GY + G  K A  L+D+     L            
Sbjct: 269  DMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILA 328

Query: 172  ------------------------------NTLLSGYAKHCKTEVVLQFFESMPEKDVVS 261
                                          N L+  YAK    +  +  F  M +KD+VS
Sbjct: 329  ACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVS 388

Query: 262  WNSVIGGYVQNKRVNEAMSFFHKMQIENVKPNIVTLVGVLSACAQVGALETGRWIHWYID 441
            WN+++ G   + +  +A+  F +M+ E   P+  T VGVL AC   G ++ G    + ++
Sbjct: 389  WNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSME 448

Query: 442  KNRFSL-NVMLCTALVDMYSKCGALESAQRVFDLMSDRDVVTWNAMIMGFSMNGQSK-KA 615
            ++   L  V     ++D+  + G L+ A R+   M     V  NA+I G  +    K  A
Sbjct: 449  RDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMP----VEPNAIIWGTLLGACRKHNA 504

Query: 616  LELFSRMLD 642
            +EL   +LD
Sbjct: 505  VELAEEVLD 513



 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 2/159 (1%)
 Frame = +1

Query: 178 LLSGYAKHCKTEVVLQFFESMPEKDVVSWNSVIGGYVQNKRVNEAMSFFHKMQIENVKPN 357
           L+S  A   +  + ++ F  + + ++  +NS+I   VQN    +A   F  MQ + V  +
Sbjct: 64  LISSLALCRQMGLAIKVFNDIQDPNIHLYNSLIRACVQNSLNAQAFRVFLDMQEKGVFTD 123

Query: 358 IVTLVGVLSACAQVGALETGRWIHWYIDKNRFSLNVMLCTALVDMYSKCGA--LESAQRV 531
             T   +L AC         + IH  I K  +  ++ +  +L+D YSKCGA  +  A+++
Sbjct: 124 NFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGAVGVSLAKKL 183

Query: 532 FDLMSDRDVVTWNAMIMGFSMNGQSKKALELFSRMLDEE 648
           F  M +RD+V+WN+MI G     +  +A  LF  M + +
Sbjct: 184 FMSMGERDIVSWNSMIAGLVKGEELSEARRLFDEMPERD 222