BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00035845
         (1275 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, part...   231   e-115
ref|XP_007219089.1| hypothetical protein PRUPE_ppa015100mg, part...   230   e-114
ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, part...   229   e-113
ref|XP_007226950.1| hypothetical protein PRUPE_ppa025194mg, part...   226   e-111
ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prun...   205   e-100
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]        169   5e-93
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   174   1e-92
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]                168   4e-91
emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]        168   4e-91
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  169   2e-90
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  169   2e-90
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...   171   1e-89
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   171   2e-89
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]       174   9e-89
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...   181   2e-88
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...   181   2e-88
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     172   4e-88
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   174   5e-88
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   174   9e-88
emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group]        174   9e-88

>ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, partial [Prunus persica]
            gi|462398849|gb|EMJ04517.1| hypothetical protein
            PRUPE_ppa019964mg, partial [Prunus persica]
          Length = 1488

 Score =  231 bits (589), Expect(4) = e-115
 Identities = 110/194 (56%), Positives = 145/194 (74%)
 Frame = -2

Query: 1271 KFVLVMLRPLVEDSI*E*TGTLGDCSGEKR*ELEQLISNFKEITEESKGLPPKIEIEHEI 1092
            +FVL+M+RP  ++                   + +L   FK++  + +GLPP+  IEHE+
Sbjct: 537  RFVLLMIRPQDQN-------------------IGKLQEKFKDLFHDVQGLPPQRAIEHEL 577

Query: 1091 QLLPEAHVPNVGLYR*SIAESDEVKK*VEELLDKGLIQPSSSPVGSPIVLVPKKGGEWRM 912
            QL+ ++H+PN+GLYR S+ ESDE+KK ++ LL++G+I+PS SP GSP++LVPKK G W M
Sbjct: 578  QLVGDSHLPNLGLYRTSLMESDEIKKQIQGLLEQGIIKPSCSPCGSPVLLVPKKDGGWHM 637

Query: 911  CIDYRDLNKITVKNRYPLPRIDDLFDQLKHAKYFSKLDLKSGYHQLRMKEEDVWKTTFKM 732
            C+DYR LNKIT+KNRYPLPRIDDL DQL  A YF+KLDLKSGYHQ+R+ EED WKT FK+
Sbjct: 638  CVDYRALNKITIKNRYPLPRIDDLLDQLHGAHYFTKLDLKSGYHQVRIHEEDTWKTAFKI 697

Query: 731  KQWLFEWLVMPFGV 690
            KQ LFEWLVMPFG+
Sbjct: 698  KQGLFEWLVMPFGL 711



 Score =  131 bits (329), Expect(4) = e-115
 Identities = 66/142 (46%), Positives = 93/142 (65%), Gaps = 1/142 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSW-DHLLHLEAVFKILNSAKLKL 518
            GL NAPATF++L+NEV+            D+IL++S +W DHL H+  V ++L + +L+L
Sbjct: 710  GLCNAPATFMRLMNEVLRPFIDDFVIVYLDDILIFSVTWEDHLHHIAQVLEVLRTNQLQL 769

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N KKCEF K+ + YLG ++G G + +D  KV  I  WP P +  E+RSFIGA QYLRKFI
Sbjct: 770  NGKKCEFGKQHLVYLGFIVGAGELKMDLEKVHVISQWPTPRSVTEVRSFIGACQYLRKFI 829

Query: 337  RNYSDIATPLLRLLSKDKSIDW 272
            R++S IA PL  L   ++  +W
Sbjct: 830  RHFSQIAAPLHSLTKANQKFEW 851



 Score = 73.9 bits (180), Expect(4) = e-115
 Identities = 34/50 (68%), Positives = 36/50 (72%)
 Frame = -1

Query: 150  GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLWGKE 1
            G    Q G PV YHSE FS  VLNYPTYDKELYA+ QA+K WR YL GKE
Sbjct: 893  GAVLFQEGKPVAYHSEMFSGPVLNYPTYDKELYAMHQAVKHWRAYLLGKE 942



 Score = 50.8 bits (120), Expect(4) = e-115
 Identities = 20/44 (45%), Positives = 34/44 (77%)
 Frame = -2

Query: 260 EKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
           E++F  LK KI  A ++ALP+++ PF+++ DAS +AMGA+ ++E
Sbjct: 856 EESFQLLKRKITEAPVLALPNLQKPFDIEADASNYAMGAVLFQE 899


>ref|XP_007219089.1| hypothetical protein PRUPE_ppa015100mg, partial [Prunus persica]
            gi|462415551|gb|EMJ20288.1| hypothetical protein
            PRUPE_ppa015100mg, partial [Prunus persica]
          Length = 641

 Score =  230 bits (586), Expect(4) = e-114
 Identities = 115/194 (59%), Positives = 148/194 (76%)
 Frame = -2

Query: 1271 KFVLVMLRPLVEDSI*E*TGTLGDCSGEKR*ELEQLISNFKEITEESKGLPPKIEIEHEI 1092
            +FVL+M+RP  E S      TL   S  +  ++ +L   FK++  + +GLPP+  IEHEI
Sbjct: 93   RFVLLMIRPQDESSGAVTLSTLS-LSPTQCSDIGKLQEKFKDLFHDVQGLPPQRAIEHEI 151

Query: 1091 QLLPEAHVPNVGLYR*SIAESDEVKK*VEELLDKGLIQPSSSPVGSPIVLVPKKGGEWRM 912
            QL+ ++ +PN+GLYR S+ ESDE+KK ++ LL++G+I+PS SP GSP++LVPKK G WRM
Sbjct: 152  QLVGDSPLPNLGLYRTSLMESDEIKKQIQGLLEQGVIKPSCSPCGSPVLLVPKKDGGWRM 211

Query: 911  CIDYRDLNKITVKNRYPLPRIDDLFDQLKHAKYFSKLDLKSGYHQLRMKEEDVWKTTFKM 732
             +DYR LNKIT+KNRYPLPRIDDL DQL  A YF+KLDLKSGYHQ+R+ EED WKT FK 
Sbjct: 212  YVDYRALNKITIKNRYPLPRIDDLLDQLHGAHYFTKLDLKSGYHQVRIHEEDTWKTAFKT 271

Query: 731  KQWLFEWLVMPFGV 690
            KQ LFEWLVMPFG+
Sbjct: 272  KQGLFEWLVMPFGL 285



 Score =  129 bits (324), Expect(4) = e-114
 Identities = 65/142 (45%), Positives = 93/142 (65%), Gaps = 1/142 (0%)
 Frame = -3

Query: 694 GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSW-DHLLHLEAVFKILNSAKLKL 518
           GL NAPATF++L+NEV+            D+IL++S +W DHL H+  V ++L + +L+L
Sbjct: 284 GLCNAPATFMRLMNEVLRPFIDDFVIVYLDDILIFSVTWEDHLHHIAQVLEVLRTNQLQL 343

Query: 517 NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
           N KKCEF K+ + YLG ++G G + ++  KV  I  WP P +  E+RSFIGA QYLRKFI
Sbjct: 344 NGKKCEFGKQHLVYLGFIVGAGELKMNLEKVHVISQWPTPRSVTEVRSFIGACQYLRKFI 403

Query: 337 RNYSDIATPLLRLLSKDKSIDW 272
           R++S IA PL  L   ++  +W
Sbjct: 404 RHFSQIAAPLHSLTKANQKFEW 425



 Score = 73.2 bits (178), Expect(4) = e-114
 Identities = 34/50 (68%), Positives = 36/50 (72%)
 Frame = -1

Query: 150 GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLWGKE 1
           G    Q G PV YHSE FS  VLNYPTYDKELYA+ QA+K WR YL GKE
Sbjct: 467 GAVLFQDGKPVAYHSEMFSGPVLNYPTYDKELYAMHQAVKHWRAYLLGKE 516



 Score = 50.1 bits (118), Expect(4) = e-114
 Identities = 20/44 (45%), Positives = 34/44 (77%)
 Frame = -2

Query: 260 EKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
           E++F  LK KI  A ++ALP+++ PF+V+ DAS +AMGA+ +++
Sbjct: 430 EESFQLLKRKITEAPVLALPNLQKPFDVEADASNYAMGAVLFQD 473


>ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, partial [Prunus persica]
            gi|462421192|gb|EMJ25455.1| hypothetical protein
            PRUPE_ppa018408mg, partial [Prunus persica]
          Length = 1440

 Score =  229 bits (583), Expect(4) = e-113
 Identities = 111/194 (57%), Positives = 144/194 (74%)
 Frame = -2

Query: 1271 KFVLVMLRPLVEDSI*E*TGTLGDCSGEKR*ELEQLISNFKEITEESKGLPPKIEIEHEI 1092
            +FVL+M+RP  ++                   + +L   FK++  + +GLPP+  IEHEI
Sbjct: 537  RFVLLMIRPQDQN-------------------IGKLQEKFKDLFHDVQGLPPQRAIEHEI 577

Query: 1091 QLLPEAHVPNVGLYR*SIAESDEVKK*VEELLDKGLIQPSSSPVGSPIVLVPKKGGEWRM 912
            QL+ ++ +PN+GLYR S+ ESDE+KK ++ LL++G+I+PS SP GSP++LVPKK G WRM
Sbjct: 578  QLVGDSPLPNLGLYRTSLMESDEIKKQIQGLLEQGVIKPSCSPCGSPVLLVPKKDGGWRM 637

Query: 911  CIDYRDLNKITVKNRYPLPRIDDLFDQLKHAKYFSKLDLKSGYHQLRMKEEDVWKTTFKM 732
            C+DYR LNKIT+KNRYPLPRIDDL DQL  A YF+KLDLKSGYHQ+R+ EED WKT FK 
Sbjct: 638  CVDYRALNKITIKNRYPLPRIDDLLDQLHGAHYFTKLDLKSGYHQVRIHEEDTWKTAFKT 697

Query: 731  KQWLFEWLVMPFGV 690
            KQ LFEWLVMPFG+
Sbjct: 698  KQGLFEWLVMPFGL 711



 Score =  129 bits (325), Expect(4) = e-113
 Identities = 66/142 (46%), Positives = 92/142 (64%), Gaps = 1/142 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSW-DHLLHLEAVFKILNSAKLKL 518
            GL NAPATF+QL+NEV+            D+IL++S +W DHL H+  V ++L + +L+L
Sbjct: 710  GLCNAPATFMQLMNEVLRPFIDDFVIVYLDDILIFSVTWEDHLHHIAQVLEVLRTNQLQL 769

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N KKCEF K+ + YLG ++G   + +D  KV  I  WP P +  E+RSFIGA QYLRKFI
Sbjct: 770  NGKKCEFGKQHLVYLGFIVGAEELKMDLEKVHVISQWPTPRSVTEVRSFIGACQYLRKFI 829

Query: 337  RNYSDIATPLLRLLSKDKSIDW 272
            R++S IA PL  L   ++  +W
Sbjct: 830  RHFSQIAAPLHSLTKANQKFEW 851



 Score = 71.6 bits (174), Expect(4) = e-113
 Identities = 33/50 (66%), Positives = 35/50 (70%)
 Frame = -1

Query: 150  GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLWGKE 1
            G    Q G PV YHSE FS  VLNYPTYDKELYA+ Q +K WR YL GKE
Sbjct: 893  GAVLFQDGKPVAYHSEMFSGPVLNYPTYDKELYAMHQVVKHWRAYLLGKE 942



 Score = 50.1 bits (118), Expect(4) = e-113
 Identities = 20/44 (45%), Positives = 34/44 (77%)
 Frame = -2

Query: 260 EKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
           E++F  LK KI  A ++ALP+++ PF+V+ DAS +AMGA+ +++
Sbjct: 856 EESFQLLKRKITEAPVLALPNLQKPFDVEADASNYAMGAVLFQD 899


>ref|XP_007226950.1| hypothetical protein PRUPE_ppa025194mg, partial [Prunus persica]
            gi|462423886|gb|EMJ28149.1| hypothetical protein
            PRUPE_ppa025194mg, partial [Prunus persica]
          Length = 1347

 Score =  226 bits (576), Expect(4) = e-111
 Identities = 112/194 (57%), Positives = 142/194 (73%)
 Frame = -2

Query: 1271 KFVLVMLRPLVEDSI*E*TGTLGDCSGEKR*ELEQLISNFKEITEESKGLPPKIEIEHEI 1092
            +FVL+M+RP  + S             EK          FK++  + +GLPP+  IEHEI
Sbjct: 466  RFVLLMIRPQDQSS-----------GAEK----------FKDLFHDVQGLPPQRAIEHEI 504

Query: 1091 QLLPEAHVPNVGLYR*SIAESDEVKK*VEELLDKGLIQPSSSPVGSPIVLVPKKGGEWRM 912
            QL+ ++ +PN+GLYR S+ ESDE+KK ++ LL++G+I+PS SP GSP++LVPKK G W M
Sbjct: 505  QLVGDSPLPNLGLYRTSLMESDEIKKQIQGLLEQGIIKPSCSPCGSPVLLVPKKDGGWSM 564

Query: 911  CIDYRDLNKITVKNRYPLPRIDDLFDQLKHAKYFSKLDLKSGYHQLRMKEEDVWKTTFKM 732
            C+DYR LNKIT+KNRYPLPRIDDL DQL  A YF+KLDLKSGYHQ+R+ EED WKT FK 
Sbjct: 565  CVDYRALNKITIKNRYPLPRIDDLLDQLHGAHYFTKLDLKSGYHQVRIHEEDTWKTAFKT 624

Query: 731  KQWLFEWLVMPFGV 690
            KQ LFEWLVMPFG+
Sbjct: 625  KQGLFEWLVMPFGL 638



 Score =  125 bits (314), Expect(4) = e-111
 Identities = 64/142 (45%), Positives = 91/142 (64%), Gaps = 1/142 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSW-DHLLHLEAVFKILNSAKLKL 518
            GL NAPATF++L+NEV+            D+IL++S +W DHL H+  V ++L + +L+L
Sbjct: 637  GLCNAPATFMRLMNEVLRPFIDDFIIVYLDDILIFSVTWEDHLHHIAQVLEVLRTNQLQL 696

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N KKCEF K+ + Y G ++G   + +D  KV  I  WP P +  E+RSFIGA QYLRKFI
Sbjct: 697  NGKKCEFGKQHLVYPGFIVGARELKMDLEKVHVISQWPTPRSVTEVRSFIGACQYLRKFI 756

Query: 337  RNYSDIATPLLRLLSKDKSIDW 272
            R++S IA PL  L   ++  +W
Sbjct: 757  RHFSQIAAPLHSLTKANQKFEW 778



 Score = 73.2 bits (178), Expect(4) = e-111
 Identities = 34/50 (68%), Positives = 36/50 (72%)
 Frame = -1

Query: 150 GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLWGKE 1
           G    Q G PV YHSE FS  VLNYPTYDKELYA+ QA+K WR YL GKE
Sbjct: 820 GAVLFQDGKPVAYHSEMFSGPVLNYPTYDKELYAMHQAVKHWRAYLLGKE 869



 Score = 50.1 bits (118), Expect(4) = e-111
 Identities = 20/44 (45%), Positives = 34/44 (77%)
 Frame = -2

Query: 260 EKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
           E++F  LK KI  A ++ALP+++ PF+V+ DAS +AMGA+ +++
Sbjct: 783 EESFQLLKRKITEAPVLALPNLQKPFDVEADASNYAMGAVLFQD 826


>ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prunus persica]
            gi|462415599|gb|EMJ20336.1| hypothetical protein
            PRUPE_ppa015965mg [Prunus persica]
          Length = 1484

 Score =  205 bits (522), Expect(4) = e-100
 Identities = 106/194 (54%), Positives = 136/194 (70%)
 Frame = -2

Query: 1271 KFVLVMLRPLVEDSI*E*TGTLGDCSGEKR*ELEQLISNFKEITEESKGLPPKIEIEHEI 1092
            +FVL+M+RP  + S      TL   S  +  ++ +L   FK++  + +G  P        
Sbjct: 547  RFVLLMIRPQDQSSRAVTLSTLS-LSPTQCSDIGKLQEKFKDLFHDVQGDSP-------- 597

Query: 1091 QLLPEAHVPNVGLYR*SIAESDEVKK*VEELLDKGLIQPSSSPVGSPIVLVPKKGGEWRM 912
                   +PN+GLYR S+ ESDE+KK ++ LL++G+I+PS SP GSP++LVPKK G WRM
Sbjct: 598  -------LPNLGLYRTSLMESDEIKKQIQGLLEQGIIKPSCSPCGSPVLLVPKKDGGWRM 650

Query: 911  CIDYRDLNKITVKNRYPLPRIDDLFDQLKHAKYFSKLDLKSGYHQLRMKEEDVWKTTFKM 732
            C+DYR LNKIT+KNRYPLPRIDDL DQL  A YF+KLDLKSGYHQ+R+ EED WKT FK 
Sbjct: 651  CVDYRALNKITIKNRYPLPRIDDLLDQLHGAHYFTKLDLKSGYHQVRIHEEDTWKTAFKT 710

Query: 731  KQWLFEWLVMPFGV 690
            KQ LFEWLVMPFG+
Sbjct: 711  KQGLFEWLVMPFGL 724



 Score =  110 bits (276), Expect(4) = e-100
 Identities = 60/142 (42%), Positives = 83/142 (58%), Gaps = 1/142 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSW-DHLLHLEAVFKILNSAKLKL 518
            GL NAPATF++L+NEV+            D+IL++S +W DHL H+              
Sbjct: 723  GLCNAPATFMRLMNEVLRPFIDDFVIVYLDDILIFSVTWEDHLHHIA------------- 769

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
              +KCEF K+ + YLG ++G G + +D  KV  I  WP P +  E+RSFIGA QYLRKFI
Sbjct: 770  --QKCEFGKQHLVYLGFIVGAGELKMDLEKVHVISQWPTPRSVTEVRSFIGACQYLRKFI 827

Query: 337  RNYSDIATPLLRLLSKDKSIDW 272
            R++S IA PL  L   ++  +W
Sbjct: 828  RHFSQIAAPLHSLTKANQKFEW 849



 Score = 71.6 bits (174), Expect(4) = e-100
 Identities = 33/50 (66%), Positives = 36/50 (72%)
 Frame = -1

Query: 150  GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLWGKE 1
            G    Q G PV YHS+ FS  VLNYPTYDKELYA+ QA+K WR YL GKE
Sbjct: 891  GAVLFQDGKPVAYHSKMFSGPVLNYPTYDKELYAMHQAVKHWRAYLLGKE 940



 Score = 50.1 bits (118), Expect(4) = e-100
 Identities = 20/44 (45%), Positives = 34/44 (77%)
 Frame = -2

Query: 260 EKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
           E++F  LK KI  A ++ALP+++ PF+V+ DAS +AMGA+ +++
Sbjct: 854 EESFQLLKRKITEAPVLALPNLQKPFDVEADASNYAMGAVLFQD 897


>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
          Length = 2241

 Score =  169 bits (429), Expect(4) = 5e-93
 Identities = 80/150 (53%), Positives = 107/150 (71%)
 Frame = -2

Query: 1139 EESKGLPPKIEIEHEIQLLPEAHVPNVGLYR*SIAESDEVKK*VEELLDKGLIQPSSSPV 960
            E   GLP    IEH+I L+P A +PN   YR +  E+ E+++ V ELLDKG ++ S SP 
Sbjct: 789  EVPPGLPLVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPC 848

Query: 959  GSPIVLVPKKGGEWRMCIDYRDLNKITVKNRYPLPRIDDLFDQLKHAKYFSKLDLKSGYH 780
              P++LVPKK G WRMC+D R +N  T++ R+P+PR+DD+ D+L  +  FSK+DL+SGYH
Sbjct: 849  AVPVILVPKKDGSWRMCVDCRAINNNTIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYH 908

Query: 779  QLRMKEEDVWKTTFKMKQWLFEWLVMPFGV 690
            Q+RMK  D WKTTFK K  L+EWLVMPFG+
Sbjct: 909  QIRMKLGDEWKTTFKTKFGLYEWLVMPFGL 938



 Score =  119 bits (299), Expect(4) = 5e-93
 Identities = 63/143 (44%), Positives = 88/143 (61%), Gaps = 1/143 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSW-DHLLHLEAVFKILNSAKLKL 518
            GLTNAP+TF++L+NEV+            D+IL+YS S  +H  HL AVF  L  A+L  
Sbjct: 937  GLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFG 996

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N+KKC F    V++LG+V+   GI VD +KV  IQ WP P T +++RSF+G   + R+F+
Sbjct: 997  NLKKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFV 1056

Query: 337  RNYSDIATPLLRLLSKDKSIDWG 269
            +++S IA PL  L  K     WG
Sbjct: 1057 QDFSTIAAPLNALTKKGVPFTWG 1079



 Score = 73.6 bits (179), Expect(4) = 5e-93
 Identities = 31/50 (62%), Positives = 37/50 (74%)
 Frame = -1

Query: 150  GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLWGKE 1
            GG FLQ G PV Y SE  S  VLNY TYDKELYA+++ ++ W+HYLW KE
Sbjct: 1120 GGVFLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKE 1169



 Score = 49.7 bits (117), Expect(4) = 5e-93
 Identities = 22/55 (40%), Positives = 35/55 (63%)
 Frame = -2

Query: 293  EG*EYRLG*KQEKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
            +G  +  G  QE AFH LK+K+ +A ++ LPD    FE++ DA+G  +G +F +E
Sbjct: 1072 KGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDANGIGLGGVFLQE 1126



 Score = 77.8 bits (190), Expect(2) = 2e-16
 Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSWDHLL-HLEAVFKILNSAKLKL 518
            GL NAPA+F + +  +             D+  VY  ++ H L +L+ V +      L L
Sbjct: 2034 GLCNAPASFQRCMMSIFSDMIEDIMEIFMDDFSVYGKTFGHCLQNLDKVLQRCQEKDLVL 2093

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N +KC F  +    LGH +   GI  D +K+  I   P P     +RSF+G   + R+FI
Sbjct: 2094 NWEKCHFMVREGIVLGHRVSERGIEFDRAKIDVIDQLPPPVNIKGIRSFLGHADFYRRFI 2153

Query: 337  RNYSDIATPLLRLLSKDKSIDWGE 266
            +++S IA PL  LL+KD   ++ +
Sbjct: 2154 KDFSTIARPLTNLLAKDTPFEFDD 2177



 Score = 35.8 bits (81), Expect(2) = 2e-16
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = -2

Query: 257  KAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAI 141
            K+F  LK+ + +  II  PD  +PFE+  DAS  A+GA+
Sbjct: 2181 KSFEILKKALDSGPIIQPPDWTLPFEIMCDASDFAVGAV 2219


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  174 bits (441), Expect(4) = 1e-92
 Identities = 81/150 (54%), Positives = 108/150 (72%)
 Frame = -2

Query: 1139 EESKGLPPKIEIEHEIQLLPEAHVPNVGLYR*SIAESDEVKK*VEELLDKGLIQPSSSPV 960
            E   GLPP   IEH+I L+P A +PN   YR +  E+ E+++ V ELLDKG ++ S SP 
Sbjct: 695  EVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPC 754

Query: 959  GSPIVLVPKKGGEWRMCIDYRDLNKITVKNRYPLPRIDDLFDQLKHAKYFSKLDLKSGYH 780
              P++LVPKK G WRMC+D R +N IT++ R+P+PR+DD+ D+L  +  FSK+DL+SGYH
Sbjct: 755  AVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYH 814

Query: 779  QLRMKEEDVWKTTFKMKQWLFEWLVMPFGV 690
            Q+RMK  D WKT FK K  L+EWLVMPFG+
Sbjct: 815  QIRMKLGDEWKTAFKTKFGLYEWLVMPFGL 844



 Score =  117 bits (293), Expect(4) = 1e-92
 Identities = 62/143 (43%), Positives = 88/143 (61%), Gaps = 1/143 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSW-DHLLHLEAVFKILNSAKLKL 518
            GLTNAP+TF++L+NEV+            D+IL+YS S  +H  HL AVF  L  A+L  
Sbjct: 843  GLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFG 902

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N++KC F    V++LG+V+   GI VD +KV  IQ WP P T +++RSF+G   + R+F+
Sbjct: 903  NLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFV 962

Query: 337  RNYSDIATPLLRLLSKDKSIDWG 269
            +++S IA PL  L  K     WG
Sbjct: 963  QDFSTIAAPLNVLTKKGVPFTWG 985



 Score = 71.2 bits (173), Expect(4) = 1e-92
 Identities = 30/50 (60%), Positives = 36/50 (72%)
 Frame = -1

Query: 150  GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLWGKE 1
            GG  LQ G PV Y SE  S  VLNY TYDKELYA+++ ++ W+HYLW KE
Sbjct: 1026 GGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKE 1075



 Score = 48.5 bits (114), Expect(4) = 1e-92
 Identities = 22/55 (40%), Positives = 34/55 (61%)
 Frame = -2

Query: 293  EG*EYRLG*KQEKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
            +G  +  G  QE AFH LK+K+ +A ++ LPD    FE++ DASG  +G +  +E
Sbjct: 978  KGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQE 1032



 Score =  110 bits (275), Expect(2) = 3e-29
 Identities = 59/142 (41%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSW-DHLLHLEAVFKILNSAKLKL 518
            GLTNAPA F+ L+N+V             D+ILVYS S  DH  HL  V   L   +L  
Sbjct: 1635 GLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILVYSQSEEDHQHHLRLVLGKLREHQLYA 1694

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
             + KCEF    V +LGHV+   G+ VD   V  + DW +P T  ++RSF+G   Y R+FI
Sbjct: 1695 KLSKCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWKQPKTVTQIRSFLGLAGYYRRFI 1754

Query: 337  RNYSDIATPLLRLLSKDKSIDW 272
             N+S IA P+ +LL K++   W
Sbjct: 1755 ENFSKIARPMTQLLKKEEKFVW 1776



 Score = 46.2 bits (108), Expect(2) = 3e-29
 Identities = 26/64 (40%), Positives = 32/64 (50%)
 Frame = -1

Query: 198  YANAI*SRYGCVRTCNGGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRH 19
            Y +A     GCV        +Q G  V Y S        NYPT+D EL A++ A+K WRH
Sbjct: 1809 YCDASPQGLGCV-------LMQEGHVVAYASRQLWPHEGNYPTHDLELAAVVHALKIWRH 1861

Query: 18   YLWG 7
            YL G
Sbjct: 1862 YLIG 1865


>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
          Length = 1667

 Score =  168 bits (426), Expect(4) = 4e-91
 Identities = 79/150 (52%), Positives = 106/150 (70%)
 Frame = -2

Query: 1139 EESKGLPPKIEIEHEIQLLPEAHVPNVGLYR*SIAESDEVKK*VEELLDKGLIQPSSSPV 960
            E   GLPP   IEH+I L+P A +PN   YR +  E+ E+++ V ELLDKG ++ S SP 
Sbjct: 618  EVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPC 677

Query: 959  GSPIVLVPKKGGEWRMCIDYRDLNKITVKNRYPLPRIDDLFDQLKHAKYFSKLDLKSGYH 780
               ++LVPKK G WRMC+D R +N IT++ R+P+PR+DD+ D+L  +  FSK+DL+SGYH
Sbjct: 678  AVLVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYH 737

Query: 779  QLRMKEEDVWKTTFKMKQWLFEWLVMPFGV 690
            Q+RM   D WKT FK K  L+EWLVMPFG+
Sbjct: 738  QIRMNLGDEWKTAFKTKFGLYEWLVMPFGL 767



 Score =  117 bits (294), Expect(4) = 4e-91
 Identities = 62/143 (43%), Positives = 87/143 (60%), Gaps = 1/143 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSW-DHLLHLEAVFKILNSAKLKL 518
            GLTNAP TF++L+NEV+            D+IL+YS S  +H  HL AVF  L  A+L  
Sbjct: 766  GLTNAPTTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFG 825

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N++KC F    V++LG+V+   GI VD +KV  IQ WP P T +++RSF+G   + R+F+
Sbjct: 826  NLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFV 885

Query: 337  RNYSDIATPLLRLLSKDKSIDWG 269
            +++S IA PL  L  K     WG
Sbjct: 886  QDFSTIAAPLNALTKKGVPFTWG 908



 Score = 71.2 bits (173), Expect(4) = 4e-91
 Identities = 30/50 (60%), Positives = 36/50 (72%)
 Frame = -1

Query: 150  GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLWGKE 1
            GG  LQ G PV Y SE  S  VLNY TYDKELYA+++ ++ W+HYLW KE
Sbjct: 949  GGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKE 998



 Score = 48.5 bits (114), Expect(4) = 4e-91
 Identities = 22/55 (40%), Positives = 34/55 (61%)
 Frame = -2

Query: 293  EG*EYRLG*KQEKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
            +G  +  G  QE AFH LK+K+ +A ++ LPD    FE++ DASG  +G +  +E
Sbjct: 901  KGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQE 955


>emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]
          Length = 1667

 Score =  168 bits (426), Expect(4) = 4e-91
 Identities = 79/150 (52%), Positives = 106/150 (70%)
 Frame = -2

Query: 1139 EESKGLPPKIEIEHEIQLLPEAHVPNVGLYR*SIAESDEVKK*VEELLDKGLIQPSSSPV 960
            E   GLPP   IEH+I L+P A +PN   YR +  E+ E+++ V ELLDKG ++ S SP 
Sbjct: 618  EVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPC 677

Query: 959  GSPIVLVPKKGGEWRMCIDYRDLNKITVKNRYPLPRIDDLFDQLKHAKYFSKLDLKSGYH 780
               ++LVPKK G WRMC+D R +N IT++ R+P+PR+DD+ D+L  +  FSK+DL+SGYH
Sbjct: 678  AVLVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYH 737

Query: 779  QLRMKEEDVWKTTFKMKQWLFEWLVMPFGV 690
            Q+RM   D WKT FK K  L+EWLVMPFG+
Sbjct: 738  QIRMNLGDEWKTAFKTKFGLYEWLVMPFGL 767



 Score =  117 bits (294), Expect(4) = 4e-91
 Identities = 62/143 (43%), Positives = 87/143 (60%), Gaps = 1/143 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSW-DHLLHLEAVFKILNSAKLKL 518
            GLTNAP TF++L+NEV+            D+IL+YS S  +H  HL AVF  L  A+L  
Sbjct: 766  GLTNAPTTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFG 825

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N++KC F    V++LG+V+   GI VD +KV  IQ WP P T +++RSF+G   + R+F+
Sbjct: 826  NLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFV 885

Query: 337  RNYSDIATPLLRLLSKDKSIDWG 269
            +++S IA PL  L  K     WG
Sbjct: 886  QDFSTIAAPLNALTKKGVPFTWG 908



 Score = 71.2 bits (173), Expect(4) = 4e-91
 Identities = 30/50 (60%), Positives = 36/50 (72%)
 Frame = -1

Query: 150  GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLWGKE 1
            GG  LQ G PV Y SE  S  VLNY TYDKELYA+++ ++ W+HYLW KE
Sbjct: 949  GGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKE 998



 Score = 48.5 bits (114), Expect(4) = 4e-91
 Identities = 22/55 (40%), Positives = 34/55 (61%)
 Frame = -2

Query: 293  EG*EYRLG*KQEKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
            +G  +  G  QE AFH LK+K+ +A ++ LPD    FE++ DASG  +G +  +E
Sbjct: 901  KGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQE 955


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  169 bits (428), Expect(4) = 2e-90
 Identities = 81/146 (55%), Positives = 106/146 (72%)
 Frame = -2

Query: 1127 GLPPKIEIEHEIQLLPEAHVPNVGLYR*SIAESDEVKK*VEELLDKGLIQPSSSPVGSPI 948
            GLPP   IEH+I L+P A +PN   YR +  E+ E+ + V+ELLDKG I+ S SP   PI
Sbjct: 758  GLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQELLDKGYIRESLSPCAVPI 817

Query: 947  VLVPKKGGEWRMCIDYRDLNKITVKNRYPLPRIDDLFDQLKHAKYFSKLDLKSGYHQLRM 768
            +LVPKK G  RMC+D R +N IT++ R+P+PR+DD+ D+L  +  FSK+DL+SGYHQ+RM
Sbjct: 818  ILVPKKDGTSRMCVDCRGINNITIRXRHPIPRLDDMLDELSGSIIFSKVDLRSGYHQIRM 877

Query: 767  KEEDVWKTTFKMKQWLFEWLVMPFGV 690
            K  D WKT FK K  L+EWLVMPFG+
Sbjct: 878  KLGDEWKTAFKTKFGLYEWLVMPFGL 903



 Score =  122 bits (305), Expect(4) = 2e-90
 Identities = 64/143 (44%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSW-DHLLHLEAVFKILNSAKLKL 518
            GLTNAP+TF++L+NEV+            D+IL+YS S  DHL HL AVF  L  A+L  
Sbjct: 902  GLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSRSLEDHLDHLRAVFTALRDARLFG 961

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N+ KC F    V++LG+V+   GI VD +K+  I+ WP+P T  ++RSF+G   + R+F+
Sbjct: 962  NLGKCTFCTDRVSFLGYVVTPQGIEVDKAKIEAIESWPQPKTVTQVRSFLGXAGFYRRFV 1021

Query: 337  RNYSDIATPLLRLLSKDKSIDWG 269
            R++S IA PL  L  KD    WG
Sbjct: 1022 RDFSTIAAPLNELTKKDVPYSWG 1044



 Score = 68.2 bits (165), Expect(4) = 2e-90
 Identities = 29/50 (58%), Positives = 35/50 (70%)
 Frame = -1

Query: 150  GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLWGKE 1
            GG  LQ G PV Y SE  S   LNY TYDKELYA+++ ++ W+HYLW KE
Sbjct: 1085 GGVLLQDGKPVAYFSEKLSGPSLNYSTYDKELYALVRTLETWQHYLWPKE 1134



 Score = 44.7 bits (104), Expect(4) = 2e-90
 Identities = 20/51 (39%), Positives = 32/51 (62%)
 Frame = -2

Query: 281  YRLG*KQEKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
            Y  G  QE+AF  LK+K+ +A ++ LPD    FE++ DASG  +G +  ++
Sbjct: 1041 YSWGTAQEEAFTVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQD 1091


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  169 bits (427), Expect(4) = 2e-90
 Identities = 81/146 (55%), Positives = 106/146 (72%)
 Frame = -2

Query: 1127 GLPPKIEIEHEIQLLPEAHVPNVGLYR*SIAESDEVKK*VEELLDKGLIQPSSSPVGSPI 948
            GLPP   IEH+I L+P A +PN   YR +  E+ E+ + V+ELLDKG I+ S SP   PI
Sbjct: 755  GLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQELLDKGYIRESLSPCAVPI 814

Query: 947  VLVPKKGGEWRMCIDYRDLNKITVKNRYPLPRIDDLFDQLKHAKYFSKLDLKSGYHQLRM 768
            +LVPKK G  RMC+D R +N IT++ R+P+PR+DD+ D+L  +  FSK+DL+SGYHQ+RM
Sbjct: 815  ILVPKKDGTSRMCVDCRGINNITIRYRHPIPRLDDMLDELSGSIIFSKVDLRSGYHQIRM 874

Query: 767  KEEDVWKTTFKMKQWLFEWLVMPFGV 690
            K  D WKT FK K  L+EWLVMPFG+
Sbjct: 875  KLGDEWKTAFKTKFGLYEWLVMPFGL 900



 Score =  122 bits (305), Expect(4) = 2e-90
 Identities = 64/143 (44%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSW-DHLLHLEAVFKILNSAKLKL 518
            GLTNAP+TF++L+NEV+            D+IL+YS S  DHL HL AVF  L  A+L  
Sbjct: 899  GLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSRSLEDHLDHLRAVFTALRDARLFG 958

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N+ KC F    V++LG+V+   GI VD +K+  I+ WP+P T  ++RSF+G   + R+F+
Sbjct: 959  NLGKCTFCTDRVSFLGYVVTPQGIEVDKAKIEAIESWPQPKTVTQVRSFLGLAGFYRRFV 1018

Query: 337  RNYSDIATPLLRLLSKDKSIDWG 269
            R++S IA PL  L  KD    WG
Sbjct: 1019 RDFSTIAAPLNELTKKDVPYSWG 1041



 Score = 68.2 bits (165), Expect(4) = 2e-90
 Identities = 29/50 (58%), Positives = 35/50 (70%)
 Frame = -1

Query: 150  GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLWGKE 1
            GG  LQ G PV Y SE  S   LNY TYDKELYA+++ ++ W+HYLW KE
Sbjct: 1082 GGVLLQDGKPVAYFSEKLSGPSLNYSTYDKELYALVRTLETWQHYLWPKE 1131



 Score = 44.7 bits (104), Expect(4) = 2e-90
 Identities = 20/51 (39%), Positives = 32/51 (62%)
 Frame = -2

Query: 281  YRLG*KQEKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
            Y  G  QE+AF  LK+K+ +A ++ LPD    FE++ DASG  +G +  ++
Sbjct: 1038 YSWGTAQEEAFTVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQD 1088


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  171 bits (432), Expect(4) = 1e-89
 Identities = 79/150 (52%), Positives = 107/150 (71%)
 Frame = -2

Query: 1139 EESKGLPPKIEIEHEIQLLPEAHVPNVGLYR*SIAESDEVKK*VEELLDKGLIQPSSSPV 960
            E   GLPP   IEH+I L+P A +PN   YR +  E+ E+++ V ELLDKG ++ S SP 
Sbjct: 674  EVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPC 733

Query: 959  GSPIVLVPKKGGEWRMCIDYRDLNKITVKNRYPLPRIDDLFDQLKHAKYFSKLDLKSGYH 780
              P++LVPKK G WRMC+D R +N IT++ R+P+PR+DD+ D+L  +  FSK++L+SGYH
Sbjct: 734  AVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVELRSGYH 793

Query: 779  QLRMKEEDVWKTTFKMKQWLFEWLVMPFGV 690
            Q+ MK  D WKT FK K  L+EWLVMPFG+
Sbjct: 794  QIHMKLGDEWKTAFKTKFGLYEWLVMPFGL 823



 Score =  115 bits (287), Expect(4) = 1e-89
 Identities = 61/143 (42%), Positives = 87/143 (60%), Gaps = 1/143 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSW-DHLLHLEAVFKILNSAKLKL 518
            GLTNAP+TF++L+NEV+            D+IL+YS S  +H  HL AVF  L  A+L  
Sbjct: 822  GLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFG 881

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N++KC F    V++LG+V+   GI VD +KV  IQ WP P T +++RSF+G   +  +F+
Sbjct: 882  NLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYCRFV 941

Query: 337  RNYSDIATPLLRLLSKDKSIDWG 269
            +++S IA PL  L  K     WG
Sbjct: 942  QDFSTIAAPLNALTKKGVPFTWG 964



 Score = 67.4 bits (163), Expect(4) = 1e-89
 Identities = 29/50 (58%), Positives = 35/50 (70%)
 Frame = -1

Query: 150  GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLWGKE 1
            GG  LQ G  V Y SE  S  VLNY TYDKELYA+++ ++ W+HYLW KE
Sbjct: 1005 GGVLLQEGKLVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKE 1054



 Score = 47.8 bits (112), Expect(4) = 1e-89
 Identities = 22/55 (40%), Positives = 33/55 (60%)
 Frame = -2

Query: 293  EG*EYRLG*KQEKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
            +G  +  G  QE AFH LK K+ +A ++ LPD    FE++ DASG  +G +  +E
Sbjct: 957  KGVPFTWGTSQENAFHMLKHKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQE 1011


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  171 bits (434), Expect(4) = 2e-89
 Identities = 82/146 (56%), Positives = 107/146 (73%)
 Frame = -2

Query: 1127 GLPPKIEIEHEIQLLPEAHVPNVGLYR*SIAESDEVKK*VEELLDKGLIQPSSSPVGSPI 948
            GLPP   IEH+I L+P A +PN   YR +  E+ E+ + V+ELLDKG I+ S SP   PI
Sbjct: 743  GLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQELLDKGYIRESLSPCAVPI 802

Query: 947  VLVPKKGGEWRMCIDYRDLNKITVKNRYPLPRIDDLFDQLKHAKYFSKLDLKSGYHQLRM 768
            +LVPKK G  RMC+D R +N IT++ R+P+PR+DD+ D+L  +  FSK+DL+SGYHQ+RM
Sbjct: 803  ILVPKKDGTSRMCVDCRGINNITIRYRHPIPRLDDMLDELSGSTIFSKVDLRSGYHQIRM 862

Query: 767  KEEDVWKTTFKMKQWLFEWLVMPFGV 690
            K  D WKTTFK K  L+EWLVMPFG+
Sbjct: 863  KLGDEWKTTFKTKFGLYEWLVMPFGL 888



 Score =  118 bits (295), Expect(4) = 2e-89
 Identities = 62/143 (43%), Positives = 88/143 (61%), Gaps = 1/143 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSWD-HLLHLEAVFKILNSAKLKL 518
            GLTNAP+TF++L+NEV+            D+IL+YS S + HL HL AVF  L  A+L  
Sbjct: 887  GLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSKSLEEHLEHLRAVFIALRDARLFG 946

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N+ KC F    V++LG+V+   GI VD +K+  I+ WP P T  ++RSF+G   + R+F+
Sbjct: 947  NLGKCTFCTDRVSFLGYVVTPQGIEVDKAKIEAIESWPHPKTVTQVRSFLGLAGFYRRFV 1006

Query: 337  RNYSDIATPLLRLLSKDKSIDWG 269
            R++S IA PL  +  KD    WG
Sbjct: 1007 RDFSTIAAPLNEVTKKDVPFVWG 1029



 Score = 70.5 bits (171), Expect(4) = 2e-89
 Identities = 30/50 (60%), Positives = 36/50 (72%)
 Frame = -1

Query: 150  GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLWGKE 1
            GG  LQ G PV Y SE FS   LNY TYDKELYA+++ ++ W+HYLW KE
Sbjct: 1070 GGVLLQDGKPVAYFSEKFSGPSLNYSTYDKELYALVRTLETWQHYLWPKE 1119



 Score = 40.0 bits (92), Expect(4) = 2e-89
 Identities = 18/48 (37%), Positives = 30/48 (62%)
 Frame = -2

Query: 272  G*KQEKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
            G  QE+AF  LK+K+  A ++ LP+    FE++ DASG  +G +  ++
Sbjct: 1029 GTAQEEAFTVLKDKLTYAPLLQLPNFNKTFELECDASGIGLGGVLLQD 1076


>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
          Length = 1587

 Score =  174 bits (442), Expect(4) = 9e-89
 Identities = 81/150 (54%), Positives = 109/150 (72%)
 Frame = -2

Query: 1139 EESKGLPPKIEIEHEIQLLPEAHVPNVGLYR*SIAESDEVKK*VEELLDKGLIQPSSSPV 960
            E   GLPP   IEH+I L+P A +PN   YR +  E+ E+++ V+ELLDKG ++ S SP 
Sbjct: 723  EVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPC 782

Query: 959  GSPIVLVPKKGGEWRMCIDYRDLNKITVKNRYPLPRIDDLFDQLKHAKYFSKLDLKSGYH 780
              P++LVPKK G WRMC+D R +N IT++ R+P+PR+DD+ D+L  +  FSK+DL+SGYH
Sbjct: 783  SVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYH 842

Query: 779  QLRMKEEDVWKTTFKMKQWLFEWLVMPFGV 690
            Q+RMK  D WKT FK K  L+EWLVMPFG+
Sbjct: 843  QIRMKLGDEWKTAFKTKFGLYEWLVMPFGL 872



 Score =  112 bits (280), Expect(4) = 9e-89
 Identities = 60/142 (42%), Positives = 87/142 (61%), Gaps = 1/142 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSW-DHLLHLEAVFKILNSAKLKL 518
            GLTNAP+TF++L+NEV+            D+IL+YS S  DH  HL AVF  L  A+L  
Sbjct: 871  GLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSRSIEDHHGHLRAVFDALRDARLFG 930

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N++KC F    V++LG+V+   GI VD +KV  I  WP P T  ++RSF+G   + R+F+
Sbjct: 931  NLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHSWPVPTTITQVRSFLGLAGFYRRFV 990

Query: 337  RNYSDIATPLLRLLSKDKSIDW 272
            +++S IA PL  L  ++ +  W
Sbjct: 991  KDFSTIAAPLHELTKRNVTFTW 1012



 Score = 67.4 bits (163), Expect(4) = 9e-89
 Identities = 28/50 (56%), Positives = 35/50 (70%)
 Frame = -1

Query: 150  GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLWGKE 1
            GG  LQ G PV Y SE  S   LNY TYDKEL+A+++ ++ W+HYLW KE
Sbjct: 1054 GGVLLQEGKPVAYFSEKLSGPSLNYSTYDKELFALVRTLETWQHYLWPKE 1103



 Score = 43.9 bits (102), Expect(4) = 9e-89
 Identities = 19/45 (42%), Positives = 29/45 (64%)
 Frame = -2

Query: 263  QEKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
            Q  AF TLK+K+ +A ++ LPD    FE++ DASG  +G +  +E
Sbjct: 1016 QRNAFDTLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQE 1060


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  181 bits (459), Expect(4) = 2e-88
 Identities = 86/164 (52%), Positives = 117/164 (71%), Gaps = 2/164 (1%)
 Frame = -2

Query: 1175 LEQLISNFKEITEES--KGLPPKIEIEHEIQLLPEAHVPNVGLYR*SIAESDEVKK*VEE 1002
            +  L+ NF+++  +   KGLPP   IEH+I  +P + +PN   YR +  E+ E+++ VEE
Sbjct: 664  VSSLLQNFEDVFPDDTPKGLPPLRGIEHQIDFVPGSQLPNRPAYRSNPEETKELQRQVEE 723

Query: 1001 LLDKGLIQPSSSPVGSPIVLVPKKGGEWRMCIDYRDLNKITVKNRYPLPRIDDLFDQLKH 822
            LL KG ++ S SP   P++LVPKK G WRMC+D R +NKITVK R+P+PR+DD+ DQL  
Sbjct: 724  LLVKGFVRESMSPCSVPVLLVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDQLCG 783

Query: 821  AKYFSKLDLKSGYHQLRMKEEDVWKTTFKMKQWLFEWLVMPFGV 690
            +K FSK+DLKSGYHQ+R+   D WKT FK K  L+EWLVMPFG+
Sbjct: 784  SKIFSKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYEWLVMPFGL 827



 Score =  120 bits (301), Expect(4) = 2e-88
 Identities = 59/144 (40%), Positives = 91/144 (63%), Gaps = 1/144 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSWD-HLLHLEAVFKILNSAKLKL 518
            GLTNAP+TF++L+N V             D+IL++S + D HL HL+ VF++L + +L  
Sbjct: 826  GLTNAPSTFMRLMNHVFKDFHGKFIVVYFDDILIFSQNLDEHLEHLKKVFEVLRNQRLFA 885

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N+KKC F    V +LG V+ + G+ VD  K+  I++WP+P +  E+RSF G   + R+F+
Sbjct: 886  NLKKCTFCVDRVVFLGFVVSSMGVEVDDEKIKAIKEWPKPNSVTEVRSFHGLASFYRRFV 945

Query: 337  RNYSDIATPLLRLLSKDKSIDWGE 266
            R++S IA PL  ++ KDK   WG+
Sbjct: 946  RDFSTIAAPLTEVIKKDKVFTWGK 969



 Score = 49.3 bits (116), Expect(4) = 2e-88
 Identities = 21/48 (43%), Positives = 34/48 (70%)
 Frame = -2

Query: 272  G*KQEKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
            G +Q+ AF+ LK+K+C+A ++ LPD    FEV+ DASG  +GA+  ++
Sbjct: 968  GKEQDDAFNLLKDKLCSAPLLQLPDFSKSFEVECDASGKGIGAVLMQD 1015



 Score = 45.8 bits (107), Expect(4) = 2e-88
 Identities = 22/47 (46%), Positives = 25/47 (53%)
 Frame = -1

Query: 150  GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLW 10
            G   +Q   P+ Y SE  S A LNY T DKELYA+ Q     RH  W
Sbjct: 1009 GAVLMQDSKPIAYFSEKLSGATLNYSTNDKELYALSQGKLSRRHAKW 1055


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  181 bits (459), Expect(4) = 2e-88
 Identities = 86/164 (52%), Positives = 117/164 (71%), Gaps = 2/164 (1%)
 Frame = -2

Query: 1175 LEQLISNFKEITEES--KGLPPKIEIEHEIQLLPEAHVPNVGLYR*SIAESDEVKK*VEE 1002
            +  L+ NF+++  +   KGLPP   IEH+I  +P + +PN   YR +  E+ E+++ VEE
Sbjct: 664  VSSLLQNFEDVFPDDTPKGLPPLRGIEHQIDFVPGSQLPNRPAYRSNPEETKELQRQVEE 723

Query: 1001 LLDKGLIQPSSSPVGSPIVLVPKKGGEWRMCIDYRDLNKITVKNRYPLPRIDDLFDQLKH 822
            LL KG ++ S SP   P++LVPKK G WRMC+D R +NKITVK R+P+PR+DD+ DQL  
Sbjct: 724  LLVKGFVRESMSPCSVPVLLVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDQLCG 783

Query: 821  AKYFSKLDLKSGYHQLRMKEEDVWKTTFKMKQWLFEWLVMPFGV 690
            +K FSK+DLKSGYHQ+R+   D WKT FK K  L+EWLVMPFG+
Sbjct: 784  SKIFSKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYEWLVMPFGL 827



 Score =  120 bits (301), Expect(4) = 2e-88
 Identities = 59/144 (40%), Positives = 91/144 (63%), Gaps = 1/144 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSWD-HLLHLEAVFKILNSAKLKL 518
            GLTNAP+TF++L+N V             D+IL++S + D HL HL+ VF++L + +L  
Sbjct: 826  GLTNAPSTFMRLMNHVFKDFHGKFIVVYFDDILIFSQNLDEHLEHLKKVFEVLRNQRLFA 885

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N+KKC F    V +LG V+ + G+ VD  K+  I++WP+P +  E+RSF G   + R+F+
Sbjct: 886  NLKKCTFCVDRVVFLGFVVSSMGVEVDDEKIKAIKEWPKPNSVTEVRSFHGLASFYRRFV 945

Query: 337  RNYSDIATPLLRLLSKDKSIDWGE 266
            R++S IA PL  ++ KDK   WG+
Sbjct: 946  RDFSTIAAPLTEVIKKDKVFTWGK 969



 Score = 49.3 bits (116), Expect(4) = 2e-88
 Identities = 21/48 (43%), Positives = 34/48 (70%)
 Frame = -2

Query: 272  G*KQEKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
            G +Q+ AF+ LK+K+C+A ++ LPD    FEV+ DASG  +GA+  ++
Sbjct: 968  GKEQDDAFNLLKDKLCSAPLLQLPDFSKSFEVECDASGKGIGAVLMQD 1015



 Score = 45.8 bits (107), Expect(4) = 2e-88
 Identities = 22/47 (46%), Positives = 25/47 (53%)
 Frame = -1

Query: 150  GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLW 10
            G   +Q   P+ Y SE  S A LNY T DKELYA+ Q     RH  W
Sbjct: 1009 GAVLMQDSKPIAYFSEKLSGATLNYSTNDKELYALSQGKLSRRHAKW 1055


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  172 bits (436), Expect(4) = 4e-88
 Identities = 80/150 (53%), Positives = 108/150 (72%)
 Frame = -2

Query: 1139 EESKGLPPKIEIEHEIQLLPEAHVPNVGLYR*SIAESDEVKK*VEELLDKGLIQPSSSPV 960
            E   GLPP   IEH+I L+P A +PN   YR +  E+ E+++ V+ LLDKG ++ S SP 
Sbjct: 698  ETPVGLPPLRGIEHQIDLIPGATLPNRPAYRTNPEETKEIQRQVQALLDKGYVRESLSPC 757

Query: 959  GSPIVLVPKKGGEWRMCIDYRDLNKITVKNRYPLPRIDDLFDQLKHAKYFSKLDLKSGYH 780
              P++LVPKK G WRMC+D R +N ITV+ R+P+PR+DD+ D+L  +  FSK+DL+SG+H
Sbjct: 758  AVPVILVPKKDGSWRMCVDCRAINNITVRYRHPIPRLDDMLDELSGSMIFSKIDLRSGFH 817

Query: 779  QLRMKEEDVWKTTFKMKQWLFEWLVMPFGV 690
            Q+RMK  D WKT FK K  L+EWLVMPFG+
Sbjct: 818  QIRMKIGDEWKTAFKTKFGLYEWLVMPFGL 847



 Score =  112 bits (279), Expect(4) = 4e-88
 Identities = 57/144 (39%), Positives = 85/144 (59%), Gaps = 1/144 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSWD-HLLHLEAVFKILNSAKLKL 518
            GLTNAP+TF++L+N V+            D+IL+YS + + H+ H++ V  +L   +L  
Sbjct: 846  GLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIYSKTLEEHVAHIQQVLDVLRKEQLYA 905

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N++KC F    V +LG V+   GI VD SKV  I+DWP P   ++++SF G   + R+F+
Sbjct: 906  NLEKCTFCTDQVVFLGFVVSGLGIQVDESKVKAIKDWPTPENVSQVKSFRGLAGFYRRFV 965

Query: 337  RNYSDIATPLLRLLSKDKSIDWGE 266
            R +S IA PL  L  K  +  WGE
Sbjct: 966  RGFSTIAAPLNELTKKGVAFQWGE 989



 Score = 68.6 bits (166), Expect(4) = 4e-88
 Identities = 28/50 (56%), Positives = 35/50 (70%)
 Frame = -1

Query: 150  GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLWGKE 1
            GG  +Q G PV Y SE    A LNY  YDKELYA+++A++ W+HYLW KE
Sbjct: 1029 GGVLMQNGQPVAYFSEKLGGAQLNYSVYDKELYALVRALETWQHYLWPKE 1078



 Score = 43.1 bits (100), Expect(4) = 4e-88
 Identities = 20/51 (39%), Positives = 31/51 (60%)
 Frame = -2

Query: 293  EG*EYRLG*KQEKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAI 141
            +G  ++ G  QEKAF  LK+++    ++ LPD    FEV+ DASG  +G +
Sbjct: 981  KGVAFQWGEPQEKAFQELKKRLSEGPLLVLPDFTKTFEVECDASGIGIGGV 1031


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score =  174 bits (442), Expect(4) = 5e-88
 Identities = 81/150 (54%), Positives = 109/150 (72%)
 Frame = -2

Query: 1139 EESKGLPPKIEIEHEIQLLPEAHVPNVGLYR*SIAESDEVKK*VEELLDKGLIQPSSSPV 960
            E   GLPP   IEH+I L+P A +PN   YR +  E+ E+++ V+ELLDKG ++ S SP 
Sbjct: 723  EVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPC 782

Query: 959  GSPIVLVPKKGGEWRMCIDYRDLNKITVKNRYPLPRIDDLFDQLKHAKYFSKLDLKSGYH 780
              P++LVPKK G WRMC+D R +N IT++ R+P+PR+DD+ D+L  +  FSK+DL+SGYH
Sbjct: 783  SIPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYH 842

Query: 779  QLRMKEEDVWKTTFKMKQWLFEWLVMPFGV 690
            Q+RMK  D WKT FK K  L+EWLVMPFG+
Sbjct: 843  QIRMKLGDEWKTAFKTKFGLYEWLVMPFGL 872



 Score =  111 bits (278), Expect(4) = 5e-88
 Identities = 60/142 (42%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSW-DHLLHLEAVFKILNSAKLKL 518
            GLTNAP+TFI+L+NEV+            D+IL+YS S  DH  HL AVF  L   +L  
Sbjct: 871  GLTNAPSTFIRLMNEVLRAFIGRFVVVYFDDILIYSRSIEDHHGHLRAVFDALRDERLFG 930

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N++KC F    V++LG+V+   GI VD +KV  I  WP P T  ++RSF+G   + R+F+
Sbjct: 931  NLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHSWPVPTTITQVRSFLGLAGFYRRFV 990

Query: 337  RNYSDIATPLLRLLSKDKSIDW 272
            +++S IA PL  L  ++ +  W
Sbjct: 991  KDFSTIAAPLHELTKRNVTFTW 1012



 Score = 65.5 bits (158), Expect(4) = 5e-88
 Identities = 27/50 (54%), Positives = 35/50 (70%)
 Frame = -1

Query: 150  GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLWGKE 1
            GG  LQ G P+ Y SE  S   LNY TYDKEL+A+++ ++ W+HYLW KE
Sbjct: 1054 GGVLLQEGKPIEYFSEKLSGPSLNYSTYDKELFALVRTLETWQHYLWPKE 1103



 Score = 43.9 bits (102), Expect(4) = 5e-88
 Identities = 19/45 (42%), Positives = 29/45 (64%)
 Frame = -2

Query: 263  QEKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
            Q  AF TLK+K+ +A ++ LPD    FE++ DASG  +G +  +E
Sbjct: 1016 QRNAFDTLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQE 1060


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1616

 Score =  174 bits (442), Expect(4) = 9e-88
 Identities = 81/150 (54%), Positives = 109/150 (72%)
 Frame = -2

Query: 1139 EESKGLPPKIEIEHEIQLLPEAHVPNVGLYR*SIAESDEVKK*VEELLDKGLIQPSSSPV 960
            E   GLPP   IEH+I L+P A +PN   YR +  E+ E+++ V+ELLDKG ++ S SP 
Sbjct: 723  EVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPC 782

Query: 959  GSPIVLVPKKGGEWRMCIDYRDLNKITVKNRYPLPRIDDLFDQLKHAKYFSKLDLKSGYH 780
              P++LVPKK G WRMC+D R +N IT++ R+P+PR+DD+ D+L  +  FSK+DL+SGYH
Sbjct: 783  SVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYH 842

Query: 779  QLRMKEEDVWKTTFKMKQWLFEWLVMPFGV 690
            Q+RMK  D WKT FK K  L+EWLVMPFG+
Sbjct: 843  QIRMKLGDEWKTAFKTKFGLYEWLVMPFGL 872



 Score =  110 bits (275), Expect(4) = 9e-88
 Identities = 59/142 (41%), Positives = 87/142 (61%), Gaps = 1/142 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSW-DHLLHLEAVFKILNSAKLKL 518
            GLTNAP+TF++L+NEV+            D+IL+YS S  DH  HL AVF  L  A+L  
Sbjct: 871  GLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSRSIEDHHGHLRAVFDALRDARLFG 930

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N++KC F    V++L +V+   GI VD +KV  I +WP P T  ++RSF+G   + R+F+
Sbjct: 931  NLEKCTFCTDRVSFLSYVVTPQGIEVDQAKVEAIHNWPVPTTITQVRSFLGLAGFYRRFV 990

Query: 337  RNYSDIATPLLRLLSKDKSIDW 272
            +++S IA PL  L  ++ +  W
Sbjct: 991  KDFSTIAAPLHELTKRNVTFTW 1012



 Score = 67.4 bits (163), Expect(4) = 9e-88
 Identities = 28/50 (56%), Positives = 35/50 (70%)
 Frame = -1

Query: 150  GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLWGKE 1
            GG  LQ G PV Y SE  S   LNY TYDKEL+A+++ ++ W+HYLW KE
Sbjct: 1054 GGVLLQEGKPVAYFSEKLSGPSLNYSTYDKELFALVRTLETWQHYLWPKE 1103



 Score = 42.4 bits (98), Expect(4) = 9e-88
 Identities = 19/45 (42%), Positives = 28/45 (62%)
 Frame = -2

Query: 263  QEKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
            Q  AF TLK+K+ +A ++ LPD    FE + DASG  +G +  +E
Sbjct: 1016 QRNAFDTLKDKLTHAPLLQLPDFNKTFEHECDASGIGLGGVLLQE 1060


>emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group]
          Length = 1239

 Score =  174 bits (441), Expect(4) = 9e-88
 Identities = 81/150 (54%), Positives = 109/150 (72%)
 Frame = -2

Query: 1139 EESKGLPPKIEIEHEIQLLPEAHVPNVGLYR*SIAESDEVKK*VEELLDKGLIQPSSSPV 960
            E   GLPP   IEH+I L+P A +PN   YR +  E+ E+++ V+ELLDKG ++ S SP 
Sbjct: 501  EVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPC 560

Query: 959  GSPIVLVPKKGGEWRMCIDYRDLNKITVKNRYPLPRIDDLFDQLKHAKYFSKLDLKSGYH 780
              P++LVPKK G WRMC+D R +N IT++ R+P+PR+DD+ D+L  +  FSK+DL+SGYH
Sbjct: 561  AVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYH 620

Query: 779  QLRMKEEDVWKTTFKMKQWLFEWLVMPFGV 690
            Q+RMK  D WKT FK K  L+EWLVMPFG+
Sbjct: 621  QIRMKLGDEWKTAFKTKFSLYEWLVMPFGL 650



 Score =  112 bits (279), Expect(4) = 9e-88
 Identities = 60/142 (42%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
 Frame = -3

Query: 694  GLTNAPATFIQLINEVMWXXXXXXXXXXXDNILVYSPSW-DHLLHLEAVFKILNSAKLKL 518
            GLTNAP+TF++L+NEV+            D IL+YS S  DH  HL AVF  L  A+L  
Sbjct: 649  GLTNAPSTFMRLMNEVLRAFIGRFVVVYFDGILIYSRSIEDHHGHLRAVFDALRDARLFG 708

Query: 517  NMKKCEFAKKSVNYLGHVMGNGGIGVDTSKVATIQDWPRPATQAELRSFIGATQYLRKFI 338
            N++KC F    V++LG+V+   GI VD +KV  I  WP P T  ++RSF+G   + R+F+
Sbjct: 709  NLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHSWPVPTTITQVRSFLGLAGFYRRFV 768

Query: 337  RNYSDIATPLLRLLSKDKSIDW 272
            +++S IA PL  L  ++ +  W
Sbjct: 769  KDFSTIAAPLHELTKRNVTFTW 790



 Score = 64.7 bits (156), Expect(4) = 9e-88
 Identities = 27/50 (54%), Positives = 34/50 (68%)
 Frame = -1

Query: 150 GGYFLQRGMPVCYHSESFSEAVLNYPTYDKELYAIIQAIKKWRHYLWGKE 1
           GG  LQ   PV Y SE  S   LNY TYDKEL+A+++ ++ W+HYLW KE
Sbjct: 832 GGVLLQEDKPVAYFSEKLSGPSLNYSTYDKELFALVRTLETWQHYLWPKE 881



 Score = 43.9 bits (102), Expect(4) = 9e-88
 Identities = 19/45 (42%), Positives = 29/45 (64%)
 Frame = -2

Query: 263 QEKAFHTLKEKICNALIIALPDMRMPFEVDTDASGHAMGAIFYRE 129
           Q  AF TLK+K+ +A ++ LPD    FE++ DASG  +G +  +E
Sbjct: 794 QRNAFDTLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQE 838