BLASTX nr result
ID: Papaver25_contig00035473
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00035473
(665 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004230519.1| PREDICTED: mRNA turnover protein 4 homolog [... 62 1e-07
ref|NP_001275260.1| mRNA turnover protein 4 homolog [Solanum tub... 62 1e-07
gb|EYU18540.1| hypothetical protein MIMGU_mgv1a013146mg [Mimulus... 60 5e-07
ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [... 59 1e-06
gb|EPS65449.1| hypothetical protein M569_09326, partial [Genlise... 59 1e-06
ref|XP_004299981.1| PREDICTED: mRNA turnover protein 4 homolog [... 59 1e-06
ref|XP_643104.1| ribosomal protein L10 family protein [Dictyoste... 58 3e-06
ref|XP_007223904.1| hypothetical protein PRUPE_ppa010931mg [Prun... 57 4e-06
ref|XP_004485517.1| PREDICTED: mRNA turnover protein 4 homolog [... 57 5e-06
ref|XP_006584472.1| PREDICTED: uncharacterized protein LOC100305... 56 9e-06
ref|XP_001771523.1| predicted protein [Physcomitrella patens] gi... 56 9e-06
ref|XP_001784939.1| predicted protein [Physcomitrella patens] gi... 56 9e-06
ref|XP_002299012.1| acidic ribosomal protein P0 [Populus trichoc... 56 9e-06
>ref|XP_004230519.1| PREDICTED: mRNA turnover protein 4 homolog [Solanum lycopersicum]
Length = 229
Score = 62.4 bits (150), Expect = 1e-07
Identities = 38/97 (39%), Positives = 53/97 (54%)
Frame = -3
Query: 636 CVESYKYIYLIKYNDFSSRNLGFGIFQQVLWPSSRFVLDCWDHITKAVLGTSAEDELKPG 457
C E Y Y+ + + RNL F F+ L SSRF L + + + LG S DE++PG
Sbjct: 33 CAEKYSSAYVFSFENM--RNLKFKEFRDQLKSSSRFFLGS-NKVMQVALGRSDSDEIRPG 89
Query: 456 IHQLSMLVPYKDIGFCFSNLPKWKLVREIANYEEFYF 346
+H++S LV D G CF+NL K ++ R YEE F
Sbjct: 90 LHKISKLV-RGDSGLCFTNLSKEEVQRLFNEYEEHDF 125
>ref|NP_001275260.1| mRNA turnover protein 4 homolog [Solanum tuberosum]
gi|76160923|gb|ABA40425.1| unknown [Solanum tuberosum]
gi|413968558|gb|AFW90616.1| putative ribosomal protein
L1 [Solanum tuberosum]
Length = 229
Score = 62.4 bits (150), Expect = 1e-07
Identities = 38/97 (39%), Positives = 53/97 (54%)
Frame = -3
Query: 636 CVESYKYIYLIKYNDFSSRNLGFGIFQQVLWPSSRFVLDCWDHITKAVLGTSAEDELKPG 457
C E Y Y+ + + RNL F F+ L SSRF L + + + LG S DE++PG
Sbjct: 33 CAEKYSSAYVFSFENM--RNLKFKEFRDQLKSSSRFFLGS-NKVMQVALGRSDSDEIRPG 89
Query: 456 IHQLSMLVPYKDIGFCFSNLPKWKLVREIANYEEFYF 346
+H++S LV D G CF+NL K ++ R YEE F
Sbjct: 90 LHKISKLV-RGDSGLCFTNLSKEEVQRLFNEYEEHDF 125
>gb|EYU18540.1| hypothetical protein MIMGU_mgv1a013146mg [Mimulus guttatus]
Length = 229
Score = 60.5 bits (145), Expect = 5e-07
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Frame = -3
Query: 630 ESYKYIYLIKYNDFSSRNLGFGIFQQVLWPSSRFVLDCWDHITKAVLGTSAEDELKPGIH 451
E + +Y+ + + RNL F F+ L SSRF L + + + LG +A DE+K G+H
Sbjct: 35 EKFDSVYVFTFENM--RNLKFKEFRDRLKSSSRFFLGS-NKVMQVALGKTAADEIKSGLH 91
Query: 450 QLSMLVPYKDIGFCFSNLPKWKLVREIANYEEFYFPHGFYYDRLTVIFRKGYLMAGDAQV 271
++S ++ + D G CF++LPK +++R YE++ F TV ++G L Q
Sbjct: 92 KISKVL-HGDSGLCFTSLPKEEVIRLFGEYEDYDFARTGSTAAETVELKEGPL----DQF 146
Query: 270 VHEN---LKKLGL 241
HE L+K G+
Sbjct: 147 THEMEPFLRKQGM 159
>ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [Vitis vinifera]
gi|298204604|emb|CBI23879.3| unnamed protein product
[Vitis vinifera]
Length = 229
Score = 59.3 bits (142), Expect = 1e-06
Identities = 35/96 (36%), Positives = 57/96 (59%)
Frame = -3
Query: 633 VESYKYIYLIKYNDFSSRNLGFGIFQQVLWPSSRFVLDCWDHITKAVLGTSAEDELKPGI 454
VE+Y IY+ + + RNL F F++ L +SRF L + + + +G S DE++PG+
Sbjct: 34 VENYSSIYVFSFENM--RNLKFKEFREKLKSTSRFFLGS-NKVMQIAIGRSVADEIRPGL 90
Query: 453 HQLSMLVPYKDIGFCFSNLPKWKLVREIANYEEFYF 346
++S L+ + D G F+NLPK ++ R YEE+ F
Sbjct: 91 RKVSKLL-HGDTGLFFTNLPKEEVQRLFNEYEEYDF 125
>gb|EPS65449.1| hypothetical protein M569_09326, partial [Genlisea aurea]
Length = 228
Score = 58.9 bits (141), Expect = 1e-06
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 3/134 (2%)
Frame = -3
Query: 633 VESYKYIYLIKYNDFSSRNLGFGIFQQVLWPSSRFVLDCWDHITKAVLGTSAEDELKPGI 454
VE Y +Y+ + + RNL F F++ L SSRF L + + + LG S DE+KPG+
Sbjct: 34 VEKYDSVYVFSFENM--RNLKFKEFREQLKSSSRFFLGS-NKVMQVALGRSESDEIKPGL 90
Query: 453 HQLSMLVPYKDIGFCFSNLPKWKLVREIANYEEFYFPHGFYYDRLTVIFRKGYLMAGDAQ 274
+++S + + G CF++LPK ++ R YEE+ + TV ++G L Q
Sbjct: 91 YKISKFL-RGNSGLCFTSLPKEEVERLFNEYEEYDYSRTGNSATETVELKEGPL----DQ 145
Query: 273 VVHEN---LKKLGL 241
HE L+K G+
Sbjct: 146 FTHEMEPFLRKQGM 159
>ref|XP_004299981.1| PREDICTED: mRNA turnover protein 4 homolog [Fragaria vesca subsp.
vesca]
Length = 229
Score = 58.9 bits (141), Expect = 1e-06
Identities = 34/95 (35%), Positives = 55/95 (57%)
Frame = -3
Query: 630 ESYKYIYLIKYNDFSSRNLGFGIFQQVLWPSSRFVLDCWDHITKAVLGTSAEDELKPGIH 451
E Y +Y+ + + RNL F F+ L +SRF L + + + LG S DE+K G+H
Sbjct: 35 EDYNSVYVFSFENM--RNLKFKEFRDQLKSTSRFFLGS-NKVMQIALGRSESDEIKSGLH 91
Query: 450 QLSMLVPYKDIGFCFSNLPKWKLVREIANYEEFYF 346
++S ++ + + G CF+NLPK ++ R YEE+ F
Sbjct: 92 KVSEVL-HGNAGLCFTNLPKEEVERLFNEYEEYDF 125
>ref|XP_643104.1| ribosomal protein L10 family protein [Dictyostelium discoideum AX4]
gi|74860796|sp|Q86HD3.1|MRT4_DICDI RecName: Full=mRNA
turnover protein 4 homolog gi|60471196|gb|EAL69159.1|
ribosomal protein L10 family protein [Dictyostelium
discoideum AX4]
Length = 223
Score = 57.8 bits (138), Expect = 3e-06
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Frame = -3
Query: 633 VESYKYIYLIKYNDFSSRNLGFGIFQQVLWPSSRFVLDCWDHITKAVLGTSAEDELKPGI 454
V+ YK+IYL + + + L + W +S+F+ + + LG S EDELKP +
Sbjct: 34 VDQYKFIYLFTFENMRNNKLKS---VRTEWSTSKFLFGK-NKVLSVGLGKSEEDELKPNL 89
Query: 453 HQLSMLVPYKDIGFCFSNLPKWKLVREIANYEEFYFPHGFYYDRLTVIFRKGYLMAGDAQ 274
H+L+ + + G F+N PK K+ NY E FP + T+ ++G ++ G
Sbjct: 90 HKLTEHLE-GECGLFFTNEPKDKVFEYFTNYSEKDFPRSGFVSEETITIKEGPIV-GMTH 147
Query: 273 VVHENLKKLG----LEKYVDYQDGKKTLLE 196
+ L+ LG L+ V + D + TL E
Sbjct: 148 SMETYLRGLGLPTTLKNGVIFVDREYTLCE 177
>ref|XP_007223904.1| hypothetical protein PRUPE_ppa010931mg [Prunus persica]
gi|462420840|gb|EMJ25103.1| hypothetical protein
PRUPE_ppa010931mg [Prunus persica]
Length = 229
Score = 57.4 bits (137), Expect = 4e-06
Identities = 32/95 (33%), Positives = 56/95 (58%)
Frame = -3
Query: 630 ESYKYIYLIKYNDFSSRNLGFGIFQQVLWPSSRFVLDCWDHITKAVLGTSAEDELKPGIH 451
E Y +Y+ + + RNL F F+ L +SRF L + + + LG S DE++P +H
Sbjct: 35 EDYSSVYVFSFENM--RNLKFKEFRDQLKSTSRFFLGS-NKVMQISLGRSDSDEIRPDLH 91
Query: 450 QLSMLVPYKDIGFCFSNLPKWKLVREIANYEEFYF 346
++S ++ + + G CF+NLPK ++ R + Y+E+ F
Sbjct: 92 KISKVL-HGNAGLCFTNLPKEEVERLFSEYKEYDF 125
>ref|XP_004485517.1| PREDICTED: mRNA turnover protein 4 homolog [Cicer arietinum]
Length = 229
Score = 57.0 bits (136), Expect = 5e-06
Identities = 35/101 (34%), Positives = 56/101 (55%)
Frame = -3
Query: 648 AL*HCVESYKYIYLIKYNDFSSRNLGFGIFQQVLWPSSRFVLDCWDHITKAVLGTSAEDE 469
A+ E Y +Y+ + + RN F++ L SSRF L + + + LG SA DE
Sbjct: 29 AIREAAEKYTSVYVFSFENM--RNQKLKDFRETLKSSSRFFLGS-NKVMQVALGRSASDE 85
Query: 468 LKPGIHQLSMLVPYKDIGFCFSNLPKWKLVREIANYEEFYF 346
+KPG++++S L+ D G F+NLPK ++ R +EE+ F
Sbjct: 86 IKPGLYKVSKLL-RGDAGMVFTNLPKEEVERLFNGFEEYDF 125
>ref|XP_006584472.1| PREDICTED: uncharacterized protein LOC100305462 isoform X1 [Glycine
max]
Length = 229
Score = 56.2 bits (134), Expect = 9e-06
Identities = 34/95 (35%), Positives = 54/95 (56%)
Frame = -3
Query: 630 ESYKYIYLIKYNDFSSRNLGFGIFQQVLWPSSRFVLDCWDHITKAVLGTSAEDELKPGIH 451
E Y ++Y+ + + RN F F+ L SSRF L + + + LG SA DE++PG+H
Sbjct: 35 EKYGHVYVFSFENM--RNQKFKEFRDQLKSSSRFFLGS-NKVMQVALGRSASDEIRPGLH 91
Query: 450 QLSMLVPYKDIGFCFSNLPKWKLVREIANYEEFYF 346
++S L+ D G F+NL K ++ R +EE+ F
Sbjct: 92 KVSKLL-RGDSGMVFTNLSKEEVERLFKEFEEYDF 125
>ref|XP_001771523.1| predicted protein [Physcomitrella patens]
gi|162677250|gb|EDQ63723.1| predicted protein
[Physcomitrella patens]
Length = 232
Score = 56.2 bits (134), Expect = 9e-06
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Frame = -3
Query: 636 CVESYKYIYLIKYNDFSSRNLGFGIFQQVLWPSSRFVLDCWDHITKAVLGTSAEDELKPG 457
C++ Y +Y+ + + RN+ F F++ L SSRF L + + + LG S +E K G
Sbjct: 33 CLDQYTSLYIFSFENM--RNIKFKEFKEKLKSSSRFFLG-GNKVLQIALGKSEAEEQKEG 89
Query: 456 IHQLSMLVPYKDIGFC---FSNLPKWKLVREIANYEEFYF 346
+HQ S L+ GFC F+NLPK +++R +EE F
Sbjct: 90 LHQASELIH----GFCGLFFTNLPKSEVIRGFQEFEELDF 125
>ref|XP_001784939.1| predicted protein [Physcomitrella patens]
gi|162663486|gb|EDQ50247.1| predicted protein
[Physcomitrella patens]
Length = 232
Score = 56.2 bits (134), Expect = 9e-06
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Frame = -3
Query: 636 CVESYKYIYLIKYNDFSSRNLGFGIFQQVLWPSSRFVLDCWDHITKAVLGTSAEDELKPG 457
C++ Y +Y+ + + RN F F++ L SSRF L + + + LG +A +E K G
Sbjct: 33 CLDEYASLYIFSF--VNMRNTKFKEFKEKLKASSRFFLG-GNKVLQIALGKTAAEEHKEG 89
Query: 456 IHQLSMLVPYKDIGFC---FSNLPKWKLVREIANYEEFYFPHGFYYDRLTVIFRKGYL 292
+HQ S + GFC F+NLPK++++RE +EE F TV ++G L
Sbjct: 90 LHQASEQIH----GFCGLFFTNLPKFEVLREFREFEELDFARTGSIATETVDLKEGPL 143
>ref|XP_002299012.1| acidic ribosomal protein P0 [Populus trichocarpa]
gi|118486150|gb|ABK94918.1| unknown [Populus
trichocarpa] gi|222846270|gb|EEE83817.1| acidic
ribosomal protein P0 [Populus trichocarpa]
Length = 229
Score = 56.2 bits (134), Expect = 9e-06
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Frame = -3
Query: 633 VESYKYIYLIKYNDFSSRNLGFGIFQQVLWPSSRFVLDCWDHITKAVLGTSAEDELKPGI 454
VE Y IY+ + + RNL F F++ +SRF L + + + LG SA DE++PG+
Sbjct: 34 VEKYNSIYVFSFENM--RNLKFKEFREQHKLTSRFFLGS-NKVMQVSLGRSAADEIRPGL 90
Query: 453 HQLSMLVPYKDIGFCFSNLPKWKLVREIANYEEFYFPHGFYYDRLTVIFRKGYLMAGDAQ 274
H++S L+ D G +NLP+ ++ R YEE+ F TV ++G L Q
Sbjct: 91 HKVSKLL-CGDAGLFLTNLPREEVERLFNEYEEYDFARTGTTATETVELKEGPL----EQ 145
Query: 273 VVHEN---LKKLGL 241
HE L+K G+
Sbjct: 146 FTHEMEPFLRKQGM 159