BLASTX nr result
ID: Papaver25_contig00035458
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00035458
(572 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 83 2e-23
ref|XP_004306191.1| PREDICTED: putative ribonuclease H protein A... 81 7e-22
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 75 2e-21
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 71 3e-21
ref|XP_007203452.1| hypothetical protein PRUPE_ppa022115mg [Prun... 75 4e-21
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 73 6e-21
ref|XP_007219602.1| hypothetical protein PRUPE_ppa023113mg, part... 79 6e-21
ref|XP_007217321.1| hypothetical protein PRUPE_ppa019733mg [Prun... 75 9e-21
ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein A... 74 1e-20
gb|AAD40135.1|AF149413_16 contains similarity to retrotransposon... 69 2e-20
ref|XP_007203344.1| hypothetical protein PRUPE_ppa020282mg [Prun... 74 2e-20
ref|XP_007207581.1| hypothetical protein PRUPE_ppa018489mg, part... 77 3e-20
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta... 65 3e-20
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 70 4e-20
ref|XP_002457223.1| hypothetical protein SORBIDRAFT_03g003583 [S... 74 6e-20
ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein A... 80 7e-20
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 73 1e-19
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 68 1e-19
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 68 1e-19
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga... 72 1e-19
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 83.2 bits (204), Expect(3) = 2e-23
Identities = 39/76 (51%), Positives = 51/76 (67%)
Frame = +1
Query: 127 NGNIGLKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTSSIVVLLNVQPCREF 306
NG GLK+DM+KA+DRV WNFL L GF + W L+ C++TSS+ VL+N +P F
Sbjct: 1177 NGAFGLKLDMNKAYDRVEWNFLEAVLRKMGFVDSWIGLVMSCVTTSSLSVLINGKPGPSF 1236
Query: 307 KTSRGIRQVDSLPPYL 354
SRG+RQ D L P+L
Sbjct: 1237 LPSRGLRQGDPLSPFL 1252
Score = 36.6 bits (83), Expect(3) = 2e-23
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 369 EVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKA 497
+V SR++ + + + + P + P+SHLFF DD L F +A
Sbjct: 1258 DVLSRMINKMCQDSLLTPVTIGPNNLPVSHLFFADDSLFFLRA 1300
Score = 35.4 bits (80), Expect(3) = 2e-23
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2
Query: 26 QSAFLSSRQISTNIIVAHEVDHSM 97
QSAF+S+RQI N+I+AHE+ H +
Sbjct: 1146 QSAFVSNRQIQDNVIIAHEIYHHL 1169
>ref|XP_004306191.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 755
Score = 81.3 bits (199), Expect(3) = 7e-22
Identities = 38/76 (50%), Positives = 52/76 (68%)
Frame = +1
Query: 127 NGNIGLKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTSSIVVLLNVQPCREF 306
+G+ LK+DM+KA+DR+ W+FL L GF+ W LI QC+ST S+ VL+N +P F
Sbjct: 40 SGSFALKLDMNKAYDRIEWSFLEAVLLKMGFAGRWVSLIKQCISTVSLSVLVNGKPGVFF 99
Query: 307 KTSRGIRQVDSLPPYL 354
K SRG+RQ D L P+L
Sbjct: 100 KPSRGLRQGDPLSPFL 115
Score = 34.7 bits (78), Expect(3) = 7e-22
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2
Query: 26 QSAFLSSRQISTNIIVAHEVDH 91
QSAF+S RQI NIIVAHE+ H
Sbjct: 9 QSAFVSGRQIQDNIIVAHELFH 30
Score = 33.9 bits (76), Expect(3) = 7e-22
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 369 EVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKA 497
+V S++L L +Q +++ P +SHLFF DD L F +A
Sbjct: 121 DVLSQILCKLTMVNILQPVQIGDLGPKVSHLFFADDSLSFLRA 163
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 75.5 bits (184), Expect(3) = 2e-21
Identities = 36/75 (48%), Positives = 48/75 (64%)
Frame = +1
Query: 136 IGLKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTSSIVVLLNVQPCREFKTS 315
I +K D+SKA+DRV W FL K + GF++HW +LI +C+ + VL+N P E S
Sbjct: 571 IAIKTDISKAYDRVEWPFLEKAMRGLGFADHWIRLIMECVKSVRYQVLINGTPHGEIIPS 630
Query: 316 RGIRQVDSLPPYLSV 360
RG+RQ D L PYL V
Sbjct: 631 RGLRQGDPLSPYLFV 645
Score = 42.7 bits (99), Expect(3) = 2e-21
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 360 LCMEVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKAD 500
+C E+ ++L + Q+ G+K+ +PPISHL F DD + + K +
Sbjct: 646 ICTEMLVKMLQSAEQKNQITGLKVARGAPPISHLLFADDSMFYCKVN 692
Score = 30.4 bits (67), Expect(3) = 2e-21
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 26 QSAFLSSRQISTNIIVAHEVDHSM 97
Q+AF+ R IS NI++AHE+ H++
Sbjct: 537 QAAFVKGRLISDNILIAHELLHAL 560
>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 1152
Score = 70.9 bits (172), Expect(3) = 3e-21
Identities = 34/75 (45%), Positives = 48/75 (64%)
Frame = +1
Query: 130 GNIGLKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTSSIVVLLNVQPCREFK 309
G LK+DMSKA+DRV W FL K L GF + + + I C++T S L+N +PC +
Sbjct: 327 GLCALKLDMSKAYDRVEWCFLEKVLGKLGFGDTFVRWIMHCITTVSYSFLVNGEPCGKLI 386
Query: 310 TSRGIRQVDSLPPYL 354
+RG+RQ D++ PYL
Sbjct: 387 PTRGLRQGDAISPYL 401
Score = 50.1 bits (118), Expect(3) = 3e-21
Identities = 19/47 (40%), Positives = 33/47 (70%)
Frame = +3
Query: 360 LCMEVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKAD 500
LC EV SR++ + + ++QG+K+ +P ISHL+F DD +F++A+
Sbjct: 404 LCAEVLSRMIKQAETNGEIQGVKVCTDAPSISHLYFADDSFIFSRAE 450
Score = 26.6 bits (57), Expect(3) = 3e-21
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 26 QSAFLSSRQISTNIIVAHEVDHSM 97
QSAF+ R IS N ++A EV H +
Sbjct: 295 QSAFVPGRLISDNSLLAFEVSHCL 318
>ref|XP_007203452.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
gi|462398983|gb|EMJ04651.1| hypothetical protein
PRUPE_ppa022115mg [Prunus persica]
Length = 1755
Score = 75.5 bits (184), Expect(3) = 4e-21
Identities = 35/75 (46%), Positives = 49/75 (65%)
Frame = +1
Query: 130 GNIGLKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTSSIVVLLNVQPCREFK 309
G++ LK+DMSKA+DRV W FL K + A GF W +++ C++T S L+N +P R
Sbjct: 987 GSLALKLDMSKAYDRVEWEFLEKMMLAMGFPILWVRMVMDCVTTVSYSFLVNGEPTRILY 1046
Query: 310 TSRGIRQVDSLPPYL 354
+RG+RQ D L PYL
Sbjct: 1047 PTRGLRQGDPLSPYL 1061
Score = 45.8 bits (107), Expect(3) = 4e-21
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +3
Query: 360 LCMEVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKA 497
LC E F+ LL+ + Q+QGI + +P +SHLFF DD +F KA
Sbjct: 1064 LCAEGFTTLLSKAERQGQLQGIVICRGAPTVSHLFFADDSFVFAKA 1109
Score = 25.8 bits (55), Expect(3) = 4e-21
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 26 QSAFLSSRQISTNIIVAHEVDH 91
QSAF+ R I+ N IVA E+ H
Sbjct: 955 QSAFVPGRLITDNSIVAFEIAH 976
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 73.2 bits (178), Expect(3) = 6e-21
Identities = 35/76 (46%), Positives = 48/76 (63%)
Frame = +1
Query: 127 NGNIGLKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTSSIVVLLNVQPCREF 306
+G + +K D+SKA+DRV WNFL K + GF+ W + I C+++ S VL+N P +
Sbjct: 930 SGYVAVKTDISKAYDRVEWNFLEKVMIQLGFAPRWVKWIMTCVTSVSYEVLINGSPYGKI 989
Query: 307 KTSRGIRQVDSLPPYL 354
SRGIRQ D L PYL
Sbjct: 990 FPSRGIRQGDPLSPYL 1005
Score = 43.1 bits (100), Expect(3) = 6e-21
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +3
Query: 363 CMEVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKA 497
C EV S +L + +KQ+ G+K+T ISHL F DD L F +A
Sbjct: 1009 CAEVLSNMLRKAEVNKQIHGMKITKDCLAISHLLFADDSLFFCRA 1053
Score = 30.4 bits (67), Expect(3) = 6e-21
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 26 QSAFLSSRQISTNIIVAHEVDHSM 97
Q+AF+ + IS N++VAHE+ HS+
Sbjct: 899 QAAFVPGQNISDNVLVAHELLHSL 922
>ref|XP_007219602.1| hypothetical protein PRUPE_ppa023113mg, partial [Prunus persica]
gi|462416064|gb|EMJ20801.1| hypothetical protein
PRUPE_ppa023113mg, partial [Prunus persica]
Length = 851
Score = 79.0 bits (193), Expect(3) = 6e-21
Identities = 35/73 (47%), Positives = 48/73 (65%)
Frame = +1
Query: 136 IGLKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTSSIVVLLNVQPCREFKTS 315
+GLK+DM+KA+DR+ W+FL TL FGF W +L+ C+ T + ++LN P F S
Sbjct: 178 LGLKLDMNKAYDRIEWDFLEATLCKFGFDNRWVELVMLCVKTITFSLVLNGSPGSPFSPS 237
Query: 316 RGIRQVDSLPPYL 354
RG+RQ D L PYL
Sbjct: 238 RGLRQGDPLSPYL 250
Score = 38.1 bits (87), Expect(3) = 6e-21
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +3
Query: 360 LCMEVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKA 497
L EV S + + ++ ++GIKL+ P +SHLFF DD L F +A
Sbjct: 253 LVSEVLSLNIINSTDTGMLRGIKLSRGGPELSHLFFADDSLFFLQA 298
Score = 29.6 bits (65), Expect(3) = 6e-21
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 26 QSAFLSSRQISTNIIVAHEVDH 91
Q+AF+ RQI NI++AHE H
Sbjct: 144 QNAFIPGRQIQDNILLAHEAFH 165
>ref|XP_007217321.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
gi|462413471|gb|EMJ18520.1| hypothetical protein
PRUPE_ppa019733mg [Prunus persica]
Length = 1275
Score = 75.5 bits (184), Expect(3) = 9e-21
Identities = 35/75 (46%), Positives = 49/75 (65%)
Frame = +1
Query: 130 GNIGLKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTSSIVVLLNVQPCREFK 309
G++ LK+DMSKA+DRV W FL K + A GF W +++ C++T S L+N +P R
Sbjct: 533 GSLALKLDMSKAYDRVEWEFLEKMMLAMGFPILWVRMVMDCVTTVSYSFLVNGEPTRILY 592
Query: 310 TSRGIRQVDSLPPYL 354
+RG+RQ D L PYL
Sbjct: 593 PTRGLRQGDPLSPYL 607
Score = 45.8 bits (107), Expect(3) = 9e-21
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +3
Query: 360 LCMEVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKA 497
LC E F+ LL+ + Q+QGI + +P +SHLFF DD +F KA
Sbjct: 610 LCAEGFTTLLSKAERQGQLQGIVICRGAPTVSHLFFADDSFVFAKA 655
Score = 24.6 bits (52), Expect(3) = 9e-21
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 26 QSAFLSSRQISTNIIVAHEVDH 91
QSAF+ R I N IVA E+ H
Sbjct: 501 QSAFVPGRLIIDNSIVAFEIAH 522
>ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Setaria
italica]
Length = 950
Score = 73.6 bits (179), Expect(3) = 1e-20
Identities = 37/75 (49%), Positives = 46/75 (61%)
Frame = +1
Query: 130 GNIGLKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTSSIVVLLNVQPCREFK 309
G LK+DMSKA+DRV WN+L K + GFS W LI C+ST + V +N E K
Sbjct: 144 GFAALKLDMSKAYDRVEWNYLEKIMLKMGFSRRWVSLILCCISTVTYRVKVNGVLTEEIK 203
Query: 310 TSRGIRQVDSLPPYL 354
+RG+RQ D L PYL
Sbjct: 204 PTRGLRQGDPLSPYL 218
Score = 43.5 bits (101), Expect(3) = 1e-20
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +3
Query: 360 LCMEVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKAD 500
LC E FS +L + + ++QGI + +P I+HL F DD LL KA+
Sbjct: 221 LCAEGFSSMLNVAEEAGRLQGISICANAPSITHLLFADDALLLLKAN 267
Score = 28.9 bits (63), Expect(3) = 1e-20
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 26 QSAFLSSRQISTNIIVAHEVDH 91
QSAF+ R IS NI++A+E+ H
Sbjct: 112 QSAFVPGRLISDNILIAYEMTH 133
>gb|AAD40135.1|AF149413_16 contains similarity to retrotransposon Ta11-1 [Arabidopsis
thaliana]
Length = 220
Score = 68.6 bits (166), Expect(3) = 2e-20
Identities = 33/75 (44%), Positives = 45/75 (60%)
Frame = +1
Query: 136 IGLKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTSSIVVLLNVQPCREFKTS 315
+ +K D+SKAFDRV W++L L A GF W +L+ C++T S VL+N P
Sbjct: 71 MAIKTDLSKAFDRVEWSYLRHLLLALGFHNDWVELVMSCVTTVSYTVLVNGHPHGLVVPQ 130
Query: 316 RGIRQVDSLPPYLSV 360
RG+RQ D L P+L V
Sbjct: 131 RGLRQGDPLSPFLFV 145
Score = 42.4 bits (98), Expect(3) = 2e-20
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +3
Query: 360 LCMEVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKAD 500
LC E S LL + + G++ +P+ P I HL F DD L KAD
Sbjct: 146 LCTEGLSHLLNRAEQQGLISGMRFSPEGPSIHHLLFADDSLFVCKAD 192
Score = 34.3 bits (77), Expect(3) = 2e-20
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 20 PLQSAFLSSRQISTNIIVAHEVDHSM 97
P QSAF+ R IS N ++AHE+ HS+
Sbjct: 35 PTQSAFVEERLISDNTLIAHEIVHSL 60
>ref|XP_007203344.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
gi|462398875|gb|EMJ04543.1| hypothetical protein
PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 73.9 bits (180), Expect(3) = 2e-20
Identities = 36/75 (48%), Positives = 46/75 (61%)
Frame = +1
Query: 130 GNIGLKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTSSIVVLLNVQPCREFK 309
G + LKIDMSKA+DRV W+FL + GF+ W QLI +C++T S +LN P
Sbjct: 932 GYLALKIDMSKAYDRVEWSFLEALMKGMGFAPRWIQLIMECVTTVSYSFMLNGNPVGYVI 991
Query: 310 TSRGIRQVDSLPPYL 354
RG+RQ D L PYL
Sbjct: 992 PQRGLRQGDPLSPYL 1006
Score = 43.5 bits (101), Expect(3) = 2e-20
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 360 LCMEVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKAD 500
LC E S L+ + + G+ L +P +SHLFF DD LF +AD
Sbjct: 1009 LCAEALSSLILQAERRNLLHGVNLCRGAPSVSHLFFADDSFLFLRAD 1055
Score = 27.3 bits (59), Expect(3) = 2e-20
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 26 QSAFLSSRQISTNIIVAHEVDHSM 97
QSAF+ R IS N IVA E+ H M
Sbjct: 900 QSAFVPGRAISDNSIVAFELLHMM 923
>ref|XP_007207581.1| hypothetical protein PRUPE_ppa018489mg, partial [Prunus persica]
gi|462403223|gb|EMJ08780.1| hypothetical protein
PRUPE_ppa018489mg, partial [Prunus persica]
Length = 1146
Score = 77.0 bits (188), Expect(3) = 3e-20
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = +1
Query: 136 IGLKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTSSIVVLLNVQPCREFKTS 315
+GLK+DM+KA+DRV W+FL TL F F W +L+ C+ T + ++LN P F S
Sbjct: 482 LGLKLDMNKAYDRVEWDFLEATLCKFSFDNRWVELVMLCVKTITFSLVLNGSPGSPFSPS 541
Query: 316 RGIRQVDSLPPYL 354
RG+RQ D L PYL
Sbjct: 542 RGLRQGDPLSPYL 554
Score = 38.1 bits (87), Expect(3) = 3e-20
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +3
Query: 360 LCMEVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKA 497
L EV S + + ++ ++GIKL+ P +SHLFF DD L F +A
Sbjct: 557 LVSEVLSLNIINSTDTGMLRGIKLSRGGPELSHLFFADDSLFFLQA 602
Score = 29.3 bits (64), Expect(3) = 3e-20
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 26 QSAFLSSRQISTNIIVAHEVDH 91
Q+AF+ RQI NI++AHE H
Sbjct: 448 QNAFVPGRQIQDNILLAHEAFH 469
>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1319
Score = 65.5 bits (158), Expect(3) = 3e-20
Identities = 32/72 (44%), Positives = 44/72 (61%)
Frame = +1
Query: 145 KIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTSSIVVLLNVQPCREFKTSRGI 324
K DMSKA+DRV W+FL + L A GF++ W I C+++ + VL+N Q RGI
Sbjct: 526 KTDMSKAYDRVEWSFLQEILVALGFNDKWISWIMGCVTSVTYSVLINGQHFGHITPERGI 585
Query: 325 RQVDSLPPYLSV 360
RQ D + P+L V
Sbjct: 586 RQGDPISPFLFV 597
Score = 42.7 bits (99), Expect(3) = 3e-20
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +3
Query: 360 LCMEVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKA 497
LC E +L +NSK+V GI+ P ++HL FVDD L +A
Sbjct: 598 LCTEALIHILQQAENSKKVSGIQFNGSGPSVNHLLFVDDTQLVCRA 643
Score = 35.8 bits (81), Expect(3) = 3e-20
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +2
Query: 20 PLQSAFLSSRQISTNIIVAHEVDHSM 97
P QSAF + R IS NI++AHE+ HS+
Sbjct: 487 PSQSAFFAERLISDNILIAHEIVHSL 512
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 70.1 bits (170), Expect(3) = 4e-20
Identities = 33/77 (42%), Positives = 45/77 (58%)
Frame = +1
Query: 130 GNIGLKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTSSIVVLLNVQPCREFK 309
G I +K+DMSKA+DRV W FL K L GF W LI + +S+ + ++N C
Sbjct: 573 GTIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMEFVSSVTYSFIINGSVCGSVV 632
Query: 310 TSRGIRQVDSLPPYLSV 360
+RG+RQ D L PYL +
Sbjct: 633 PARGLRQGDPLSPYLFI 649
Score = 45.4 bits (106), Expect(3) = 4e-20
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 369 EVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKAD 500
+ FS+++ KQ+ G K + P ISHLFF DD LLFT+A+
Sbjct: 653 DAFSKMIQRKVQDKQLHGAKASRSGPEISHLFFADDSLLFTRAN 696
Score = 28.1 bits (61), Expect(3) = 4e-20
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 26 QSAFLSSRQISTNIIVAHEVDHSM 97
QSAF+ R I+ N ++A EV HSM
Sbjct: 541 QSAFVPGRLITDNALIAMEVFHSM 564
>ref|XP_002457223.1| hypothetical protein SORBIDRAFT_03g003583 [Sorghum bicolor]
gi|241929198|gb|EES02343.1| hypothetical protein
SORBIDRAFT_03g003583 [Sorghum bicolor]
Length = 564
Score = 74.3 bits (181), Expect(3) = 6e-20
Identities = 32/75 (42%), Positives = 51/75 (68%)
Frame = +1
Query: 142 LKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTSSIVVLLNVQPCREFKTSRG 321
LK+D++KAFDR+ W+F++ L GF E++ LI++C+ST+++ V++N P F RG
Sbjct: 218 LKVDLAKAFDRIEWHFIVSALKRQGFKENFIDLIYKCISTTTMSVIINGNPAPSFHPKRG 277
Query: 322 IRQVDSLPPYLSVSA 366
+RQ L PYL + A
Sbjct: 278 VRQGCPLSPYLFILA 292
Score = 36.2 bits (82), Expect(3) = 6e-20
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 354 LSLCMEVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKA 497
LS+C++ S +S Q+QGI L PK P I L F DDL++ +A
Sbjct: 296 LSICLQKHS-------SSHQIQGITLGPKCPRIHSLLFADDLIVCGQA 336
Score = 32.7 bits (73), Expect(3) = 6e-20
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 20 PLQSAFLSSRQISTNIIVAHEVDHS 94
P Q+AF+ R I++NII+A E+ HS
Sbjct: 181 PTQAAFIQGRHIASNIIIAQEIIHS 205
>ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 786
Score = 80.5 bits (197), Expect(2) = 7e-20
Identities = 37/76 (48%), Positives = 50/76 (65%)
Frame = +1
Query: 127 NGNIGLKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTSSIVVLLNVQPCREF 306
N +GLK+DM+KA+DRV W+FL L FGF++ W LI C+S+ S ++LN P + F
Sbjct: 7 NNELGLKLDMNKAYDRVEWDFLKAALIRFGFAQSWVNLIMACVSSVSFSIVLNGCPGKSF 66
Query: 307 KTSRGIRQVDSLPPYL 354
RG+RQ D L PYL
Sbjct: 67 FPGRGLRQGDPLSPYL 82
Score = 42.7 bits (99), Expect(2) = 7e-20
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +3
Query: 369 EVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKA 497
EV S LT K + GIKL + P +SH+FF DD L F KA
Sbjct: 88 EVLSVRLTRAVQDKSLLGIKLCRRGPTLSHMFFADDALFFLKA 130
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 72.8 bits (177), Expect(3) = 1e-19
Identities = 33/77 (42%), Positives = 46/77 (59%)
Frame = +1
Query: 130 GNIGLKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTSSIVVLLNVQPCREFK 309
G + +K+DMSKA+DRV W FL K L GF W L+ C++T S ++N + C
Sbjct: 576 GLMAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLVMSCVATVSYSFIINGRVCGSVT 635
Query: 310 TSRGIRQVDSLPPYLSV 360
SRG+RQ D L P+L +
Sbjct: 636 PSRGLRQGDPLSPFLFI 652
Score = 42.7 bits (99), Expect(3) = 1e-19
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +3
Query: 360 LCMEVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKA 497
L + FS+++ SK++ G K + P ISHL F DD LLFT+A
Sbjct: 653 LVADAFSQMVKQKVVSKEIHGAKASRNGPEISHLLFADDSLLFTRA 698
Score = 26.9 bits (58), Expect(3) = 1e-19
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 26 QSAFLSSRQISTNIIVAHEVDHSM 97
QSAF+ R IS N ++A E+ H+M
Sbjct: 544 QSAFVPGRLISDNSLIALEIFHTM 567
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 68.2 bits (165), Expect(3) = 1e-19
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +1
Query: 94 YEXXXXXXXXXNGNIG---LKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTS 264
YE +G +G K+DMSKA+DRV W+FL + GF W LI +C+ST
Sbjct: 755 YEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMKCVSTV 814
Query: 265 SIVVLLNVQPCREFKTSRGIRQVDSLPPYL 354
+ + +N + F RG+RQ D L PYL
Sbjct: 815 TYRIRVNGELSESFSPERGLRQGDPLSPYL 844
Score = 41.6 bits (96), Expect(3) = 1e-19
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 360 LCMEVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKAD 500
LC E FS LL+ + ++ GI++ +P +SHL F DD L+ +A+
Sbjct: 847 LCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRAN 893
Score = 32.3 bits (72), Expect(3) = 1e-19
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 20 PLQSAFLSSRQISTNIIVAHEVDHSM 97
P QSAF+ R IS NI++A+E+ H M
Sbjct: 736 PAQSAFVPGRLISDNILIAYEMTHYM 761
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 68.2 bits (165), Expect(3) = 1e-19
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +1
Query: 94 YEXXXXXXXXXNGNIG---LKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTS 264
YE +G +G K+DMSKA+DRV W+FL + GF W LI +C+ST
Sbjct: 751 YEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMKCVSTV 810
Query: 265 SIVVLLNVQPCREFKTSRGIRQVDSLPPYL 354
+ + +N + F RG+RQ D L PYL
Sbjct: 811 TYRIRVNGELSESFSPERGLRQGDPLSPYL 840
Score = 41.6 bits (96), Expect(3) = 1e-19
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 360 LCMEVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKAD 500
LC E FS LL+ + ++ GI++ +P +SHL F DD L+ +A+
Sbjct: 843 LCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRAN 889
Score = 32.3 bits (72), Expect(3) = 1e-19
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 20 PLQSAFLSSRQISTNIIVAHEVDHSM 97
P QSAF+ R IS NI++A+E+ H M
Sbjct: 732 PAQSAFVPGRLISDNILIAYEMTHYM 757
>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 72.4 bits (176), Expect(3) = 1e-19
Identities = 34/77 (44%), Positives = 44/77 (57%)
Frame = +1
Query: 130 GNIGLKIDMSKAFDRVNWNFLLKTLTAFGFSEHWCQLIHQCLSTSSIVVLLNVQPCREFK 309
G I +K+DMSKA+DRV W FL K L GF W LI C+S+ S ++N C
Sbjct: 573 GTIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMSCVSSVSYSFIINGGVCGSVT 632
Query: 310 TSRGIRQVDSLPPYLSV 360
+RG+R D L PYL +
Sbjct: 633 PARGLRHGDPLSPYLFI 649
Score = 41.6 bits (96), Expect(3) = 1e-19
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +3
Query: 360 LCMEVFSRLLTHLQNSKQVQGIKLTPKSPPISHLFFVDDLLLFTKA 497
L + FS+++ KQ+ G K + P ISHLFF D LLFT+A
Sbjct: 650 LIADAFSKMIQKKVQEKQLHGAKASRSGPVISHLFFADVSLLFTRA 695
Score = 28.1 bits (61), Expect(3) = 1e-19
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 26 QSAFLSSRQISTNIIVAHEVDHSM 97
QSAF+ R I+ N ++A EV HSM
Sbjct: 541 QSAFVPGRLITDNALIAMEVFHSM 564