BLASTX nr result

ID: Papaver25_contig00035271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00035271
         (455 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007021323.1| F-box and associated interaction domains-con...    57   4e-06
ref|XP_003623082.1| F-box [Medicago truncatula] gi|355498097|gb|...    56   5e-06
ref|XP_006373085.1| hypothetical protein POPTR_0017s08560g [Popu...    56   5e-06
gb|EMT02075.1| Putative F-box protein [Aegilops tauschii]              56   6e-06

>ref|XP_007021323.1| F-box and associated interaction domains-containing protein,
           putative isoform 1 [Theobroma cacao]
           gi|590608658|ref|XP_007021324.1| F-box and associated
           interaction domains-containing protein, putative isoform
           1 [Theobroma cacao] gi|590608661|ref|XP_007021325.1|
           F-box and associated interaction domains-containing
           protein, putative isoform 1 [Theobroma cacao]
           gi|508720951|gb|EOY12848.1| F-box and associated
           interaction domains-containing protein, putative isoform
           1 [Theobroma cacao] gi|508720952|gb|EOY12849.1| F-box
           and associated interaction domains-containing protein,
           putative isoform 1 [Theobroma cacao]
           gi|508720953|gb|EOY12850.1| F-box and associated
           interaction domains-containing protein, putative isoform
           1 [Theobroma cacao]
          Length = 398

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = -3

Query: 267 LPSDIIPEILSRLPTKSVLKSKLVCKTWKQLIHHRSFPQMHL-TRLNQPDSGKLRYVCLD 91
           LP ++I EIL RLP KS++K + VCK W  LI   SF   HL T L++P+   L     +
Sbjct: 5   LPQEVILEILRRLPVKSLVKCRSVCKAWNSLIKSPSFISSHLQTALSKPNDHLLLLRLFE 64

Query: 90  DDRDYSCKDYLYYFEKNDTEDW 25
           +D++     Y  +F+ +D +++
Sbjct: 65  NDKE----SYFLHFDNDDFDEY 82


>ref|XP_003623082.1| F-box [Medicago truncatula] gi|355498097|gb|AES79300.1| F-box
           [Medicago truncatula]
          Length = 402

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/64 (45%), Positives = 43/64 (67%)
 Frame = -3

Query: 270 ILPSDIIPEILSRLPTKSVLKSKLVCKTWKQLIHHRSFPQMHLTRLNQPDSGKLRYVCLD 91
           ILP +II E+LS LP KS+++ K VCK+WK +I + SF ++HL R  +  + +L  V L 
Sbjct: 21  ILPDEIITELLSFLPVKSLMRMKCVCKSWKIIISNSSFVELHLHRSTR--NPQLTMVYLP 78

Query: 90  DDRD 79
           +D D
Sbjct: 79  EDTD 82


>ref|XP_006373085.1| hypothetical protein POPTR_0017s08560g [Populus trichocarpa]
           gi|550319791|gb|ERP50882.1| hypothetical protein
           POPTR_0017s08560g [Populus trichocarpa]
          Length = 374

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 32/77 (41%), Positives = 43/77 (55%)
 Frame = -3

Query: 267 LPSDIIPEILSRLPTKSVLKSKLVCKTWKQLIHHRSFPQMHLTRLNQPDSGKLRYVCLDD 88
           LPS+II EILSRLP K +++ K V KTW+ LI H  F + HL R  +  +     + L  
Sbjct: 8   LPSEIISEILSRLPVKCLVRFKCVSKTWRSLISHPEFVKNHLKRTKEDTNANHYKIFLST 67

Query: 87  DRDYSCKDYLYYFEKND 37
           D   S  D   YF+ +D
Sbjct: 68  DPHLSI-DPEAYFDADD 83


>gb|EMT02075.1| Putative F-box protein [Aegilops tauschii]
          Length = 320

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/54 (46%), Positives = 36/54 (66%)
 Frame = -3

Query: 267 LPSDIIPEILSRLPTKSVLKSKLVCKTWKQLIHHRSFPQMHLTRLNQPDSGKLR 106
           +P D+IPEI+SRLP ++VL+S+ +CK W+ +I    FP  H  R +QP    LR
Sbjct: 14  IPDDLIPEIISRLPARAVLRSRAICKLWRSIIDDDRFPHAH--RRHQPHMPLLR 65


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