BLASTX nr result

ID: Papaver25_contig00034897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00034897
         (931 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004429259.1| putative capsid protein [Fig cryptic virus] ...   163   1e-37
ref|XP_006837117.1| hypothetical protein AMTR_s00110p00120920, p...    65   5e-08

>ref|YP_004429259.1| putative capsid protein [Fig cryptic virus]
           gi|332163671|emb|CBW77437.1| putative capsid protein
           [Fig cryptic virus]
          Length = 337

 Score =  163 bits (412), Expect = 1e-37
 Identities = 96/252 (38%), Positives = 132/252 (52%)
 Frame = -1

Query: 757 DPLEKLVAHGKIRTQPYTHYRSATTLTVDFELLANKIQSILSEAYQYHDPLCLQYAGTNK 578
           D LE L+A G+++  PY          VDF+ L N+I +I+   Y   D L   Y GT  
Sbjct: 7   DILEDLIADGRLQITPYVTSTEPKIFDVDFDALWNRINAIIVPIYTNWDQLRFHYPGTTT 66

Query: 577 EIGQCLMSDILALTDFALCVLYNRLQAVAESYSSSTSLSRMKKRAPVDNKMVFPXXXXXX 398
            +   +  D+  L  FAL  LYNRL++VAE +   T  SRM  RAP+ N+M FP      
Sbjct: 67  TVTNNITLDVGHLVTFALWQLYNRLRSVAECFHHPTRTSRMNTRAPISNRMEFPSFLSSM 126

Query: 397 XXSIGPLRITDAGRDALVLYAPLPNTDNNYGRSQSHELVYGHYQRLINCLHSCGIGLSPI 218
             SI  LRI D   D L L+     T NNYGRS       G Y RL   L + G+ L+PI
Sbjct: 127 LESISWLRINDGPVDYLALFTAPTGTSNNYGRSTVQVPDNGCYDRLTGKLRALGVQLTPI 186

Query: 217 DFSNREGAFWTTCSLNFKQHPHFLNVIGTVHPSHYTNEDIVRSLAILDTDSSKNPFENVA 38
           D +   G+FW T  +  ++     N++GT H SHY NED +R++ +  T  S+ PF +  
Sbjct: 187 DMTPSAGSFWPTTQVITEE--ELYNIVGTFHSSHYVNEDAIRAIFLAGTAHSQ-PFPDFG 243

Query: 37  MTVGFTSNADVV 2
           MTVGF ++  V+
Sbjct: 244 MTVGFVTDRTVM 255


>ref|XP_006837117.1| hypothetical protein AMTR_s00110p00120920, partial [Amborella
           trichopoda] gi|548839710|gb|ERM99970.1| hypothetical
           protein AMTR_s00110p00120920, partial [Amborella
           trichopoda]
          Length = 185

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 3/176 (1%)
 Frame = -1

Query: 814 KFHNSISSMAAKRKREC--SPDPLEK-LVAHGKIRTQPYTHYRSATTLTVDFELLANKIQ 644
           ++H + SS   ++  E   +  P+E  LV  G++  +P + +     L +DF  L   + 
Sbjct: 8   RYHTTHSSSQGRQSEEVLSTQQPMEDVLVRKGRLIPKPRSIWPKVNVLGIDFVHLYTVLL 67

Query: 643 SILSEAYQYHDPLCLQYAGTNKEIGQCLMSDILALTDFALCVLYNRLQAVAESYSSSTSL 464
             L      H+PL         EI   ++  I +L + +L  L+N L+++AE+    T  
Sbjct: 68  FWLESFLTSHEPLRKFCDRITYEITTVIIDGIRSLLNQSLLELWNSLRSIAETNDHDTRN 127

Query: 463 SRMKKRAPVDNKMVFPXXXXXXXXSIGPLRITDAGRDALVLYAPLPNTDNNYGRSQ 296
           +   ++AP   +   P         IGPL I D+  D +++YAP     +NY R++
Sbjct: 128 NIFARKAPTFKEFEMPRFYANLLFGIGPLHIEDSLMDTIIIYAPAQERGDNYRRTK 183


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