BLASTX nr result

ID: Papaver25_contig00034669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00034669
         (766 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004228574.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...    79   2e-12
ref|XP_003605596.1| 50S ribosomal protein L2-B [Medicago truncat...    67   7e-09
dbj|BAA04406.1| ORF63 [Pinus thunbergii]                               59   1e-06
ref|YP_008592707.1| ribosomal protein L2 (chloroplast) [Berberis...    59   2e-06
gb|EXC28024.1| 50S ribosomal protein L2 [Morus notabilis]              58   4e-06
gb|EXB89255.1| hypothetical protein L484_006809 [Morus notabilis]      58   4e-06

>ref|XP_004228574.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L2,
           chloroplastic-like [Solanum lycopersicum]
          Length = 414

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 39/57 (68%), Positives = 43/57 (75%)
 Frame = +2

Query: 65  QVIEFSSSSYKIIDSRDMVIWRRQNCLKHRQNRKRPLFQREEDGLFTFHLMVRGELK 235
           QVIEFSSSSYKIIDSRD+VIWRRQNC KHRQNRKRP F +   G    H+   G+ K
Sbjct: 132 QVIEFSSSSYKIIDSRDIVIWRRQNCFKHRQNRKRPFFXKR--GGRVIHISFDGQRK 186


>ref|XP_003605596.1| 50S ribosomal protein L2-B [Medicago truncatula]
           gi|355506651|gb|AES87793.1| 50S ribosomal protein L2-B
           [Medicago truncatula]
          Length = 399

 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 32/57 (56%), Positives = 38/57 (66%)
 Frame = +2

Query: 65  QVIEFSSSSYKIIDSRDMVIWRRQNCLKHRQNRKRPLFQREEDGLFTFHLMVRGELK 235
           QVIEF S SYKIID +D+VIWRRQNC KHRQN K  LF+ +       H+   G+ K
Sbjct: 115 QVIEFGSFSYKIIDPKDIVIWRRQNCFKHRQNTKLSLFRFKRGKTRVIHISFDGQRK 171


>dbj|BAA04406.1| ORF63 [Pinus thunbergii]
          Length = 63

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 38/74 (51%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = -1

Query: 565 INQNPFPNCTSFFQSIRLSGCI**YLDRWILYE-SYDEVPHEWIYRNPNLPNHSCYDLLH 389
           +N+NPFPNCTS  Q I+LSGCI   L   IL + + DE  H        L    C D LH
Sbjct: 1   MNKNPFPNCTSLSQGIQLSGCI---LYSHILNKYNRDEKEH--------LLYSLCPDSLH 49

Query: 388 PRSPRSIIWLMFFM 347
           PRS  SIIWL+FFM
Sbjct: 50  PRSLYSIIWLIFFM 63


>ref|YP_008592707.1| ribosomal protein L2 (chloroplast) [Berberis bealei]
           gi|536462748|gb|AGU37113.1| ribosomal protein L2
           (chloroplast) [Berberis bealei]
          Length = 310

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/34 (82%), Positives = 28/34 (82%)
 Frame = +2

Query: 491 ISLYTSRKPYALEEACTVWEGVLIDQKGEEISED 592
           IS YTS KPYALEEACTVWEGVLIDQK E  S D
Sbjct: 135 ISSYTSGKPYALEEACTVWEGVLIDQKEESTSTD 168


>gb|EXC28024.1| 50S ribosomal protein L2 [Morus notabilis]
          Length = 200

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 28/34 (82%), Positives = 28/34 (82%)
 Frame = +2

Query: 491 ISLYTSRKPYALEEACTVWEGVLIDQKGEEISED 592
           IS  TSRKPYALEEACTVWEGVLIDQK E  S D
Sbjct: 25  ISSSTSRKPYALEEACTVWEGVLIDQKEESTSTD 58


>gb|EXB89255.1| hypothetical protein L484_006809 [Morus notabilis]
          Length = 97

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 28/34 (82%), Positives = 28/34 (82%)
 Frame = +2

Query: 491 ISLYTSRKPYALEEACTVWEGVLIDQKGEEISED 592
           IS  TSRKPYALEEACTVWEGVLIDQK E  S D
Sbjct: 25  ISSSTSRKPYALEEACTVWEGVLIDQKEESTSTD 58


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