BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00033057
         (1514 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    87   2e-14
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    79   4e-12
ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612...    73   4e-10
ref|XP_006478726.1| PREDICTED: putative ribonuclease H protein A...    73   4e-10
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...    72   9e-10
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A...    72   9e-10
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A...    72   9e-10
ref|XP_006285450.1| hypothetical protein CARUB_v10006875mg, part...    72   9e-10
ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein A...    71   1e-09
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              70   2e-09
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              70   2e-09
ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623...    70   2e-09
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    70   2e-09
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta...    70   3e-09
ref|XP_004292563.1| PREDICTED: putative ribonuclease H protein A...    65   7e-09
ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617...    68   9e-09
gb|ABE80156.1| Ribonuclease H [Medicago truncatula]                    68   9e-09
ref|XP_007010730.1| Ribonuclease H protein, putative [Theobroma ...    67   2e-08
ref|XP_006492478.1| PREDICTED: putative ribonuclease H protein A...    67   3e-08
ref|XP_002462405.1| hypothetical protein SORBIDRAFT_02g025125 [S...    67   3e-08

>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 87.0 bits (214), Expect = 2e-14
 Identities = 58/189 (30%), Positives = 87/189 (46%)
 Frame = -3

Query: 1431 LPTSTAVMTMAILLPSAPGQDILRWQRNSIGEYSVKSGYQLITAQQAPTIFPTVTHTFIW 1252
            +P +      ++ +PS+  QD L W     G+YSVKSG  LI      TI   V   +IW
Sbjct: 995  VPPNIVKAISSVFIPSSSQQDRLLWGLTPTGQYSVKSGASLIREVNGGTI-EKVEFNWIW 1053

Query: 1251 KINCPSKLKVFLWKAAHQGLPSFTVLH*ASLTPTAAQCSQCSFEDEMNDHILFQCP*AIQ 1072
             I+ P K+K FLWKA + GL + + L  + +      C  C    E   H+ FQCP  + 
Sbjct: 1054 GIHAPPKIKNFLWKACNDGLATTSRLERSHIF-VPQNCCFCDCPSETICHLCFQCPFTLD 1112

Query: 1071 VCTYLFTQFTSHADYGHQTIPPLPLSINSLFIPTTHHKLPSSIQTLCTSVFWNIWLTRNA 892
            + ++L  +F   A         L LS     +   H  L     T  + V+W++W  RN 
Sbjct: 1113 IYSHLEDKFQWPA--YPSWFSTLQLSSFRSVLEACHINLTLEYLTKLSIVWWHVWYFRNK 1170

Query: 891  LIYQHSTIS 865
            LI+ + + S
Sbjct: 1171 LIFNNESTS 1179


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score = 79.3 bits (194), Expect = 4e-12
 Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
 Frame = -3

Query: 1374 QDILRWQRNSIGEYSVKSGYQLITAQ------QAPTIFPTVTHTF--IWKINCPSKLKVF 1219
            +D   W  +  G YSVK+GY+ ++ Q      Q   + P+V   F  IW ++   K+++F
Sbjct: 998  EDSFCWLHSHNGLYSVKTGYEFLSKQVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRIF 1057

Query: 1218 LWKAAHQGLPSFTVLH*ASLTPTAAQCSQCSFEDEMNDHILFQCP*AIQVCTYLFTQFTS 1039
            LWKA H  +P    L    +      C  C  E+E  +HILF+CP A QV        T 
Sbjct: 1058 LWKALHGAIPVEDRLRTRGIRSDDG-CLMCDTENETINHILFECPLARQVWA-----ITH 1111

Query: 1038 HADYGHQTIPPLPLSINSLFIPTTHHKLPSSIQTLCTSVFWNIWLTRNALIYQ 880
             +  G +    +  +++ L   T  + LP  ++ +   + W +W  RNAL+++
Sbjct: 1112 LSSAGSEFSNSVYTNMSRLIDLTQQNDLPHHLRFVSPWILWFLWKNRNALLFE 1164


>ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612946 [Citrus sinensis]
          Length = 589

 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 9/212 (4%)
 Frame = -3

Query: 1470 QDHTWIHECVRQTLPTSTAVMTMAILLPSAPGQDILRWQRNSIGEYSVKSGYQL---ITA 1300
            Q+  W    + Q      A +   I LP  P +D++ W  N  G YSVKSGYQL   I  
Sbjct: 198  QNLQWNEIMINQNFAKEDAEIIRNIPLPRTPQEDMVIWHYNKKGIYSVKSGYQLALKIKF 257

Query: 1299 QQAPTIFPTVTHTF--IWKINCPSKLKVFLWKAAHQGLPSFTVLH*ASL--TPTAAQCSQ 1132
             ++P         +  IW++N P K+K+F+WKA    LP    L    +   PT   C  
Sbjct: 258  SESPAGSTGAPQGWQHIWRLNLPEKIKIFVWKATKNLLPMAENLWRRKVLKEPT---CHL 314

Query: 1131 CSFEDEMNDHILFQCP*AIQV--CTYLFTQFTSHADYGHQTIPPLPLSINSLFIPTTHHK 958
            C    E   H L +C  A ++  CT+L  +  S           +   + S+ I   ++ 
Sbjct: 315  CKAGCEDVFHALMECRVARKIWKCTHLENEVKS----------VIREDMLSVMIGAMNNW 364

Query: 957  LPSSIQTLCTSVFWNIWLTRNALIYQHSTISP 862
              S +  + T ++W  W  RN L++Q   + P
Sbjct: 365  AKSEVDYVAT-IWWVAWHARNKLLFQGKKLDP 395


>ref|XP_006478726.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 473

 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 5/205 (2%)
 Frame = -3

Query: 1458 WIHECVRQTLPTSTAVMTMAILLPSAPGQDILRWQRNSIGEYSVKSGYQLITAQQAP--- 1288
            W  + + Q  P   +   + + LP  P +DIL W+ +  G Y+VKSGYQL    + P   
Sbjct: 127  WKEDKIAQLYPKEISERIVKLPLPKTPQEDILIWRFDKHGTYTVKSGYQLAVQLKFPENP 186

Query: 1287 --TIFPTVTHTFIWKINCPSKLKVFLWKAAHQGLPSFTVLH*ASLTPTAAQCSQCSFEDE 1114
              +         IW    P K+K+F+W+AA   LP+   L    + P+   C +C  + E
Sbjct: 187  GCSDASKSQWKVIWSTEIPEKVKIFMWRAAKNLLPTANNLWKKKVVPSPI-CQRCFCKSE 245

Query: 1113 MNDHILFQCP*AIQVCTYLFTQFTSHADYGHQTIPPLPLSINSLFIPTTHHKLPSSIQTL 934
               H L  C  A +  T+  T F  + D        +  ++  L +      L   I   
Sbjct: 246  DPCHALLDCKAARK--TWKLTTF--YDDVKQMAHQDMLSALQELALSRGKEDLAQFI--- 298

Query: 933  CTSVFWNIWLTRNALIYQHSTISPQ 859
              +V W IW  RN  + + +  SPQ
Sbjct: 299  --AVCWAIWHERNLSVLEGNQNSPQ 321


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X2
            [Citrus sinensis]
          Length = 765

 Score = 71.6 bits (174), Expect = 9e-10
 Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 6/204 (2%)
 Frame = -3

Query: 1470 QDHTWIHECVRQTLPTSTAVMTMAILLPSAPGQDILRWQRNSIGEYSVKSGYQLITAQQA 1291
            +D  W  + +RQ      A   + I LP     D + W  +  G YSVKSGYQL    + 
Sbjct: 377  EDQCWRDDVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKF 436

Query: 1290 P-----TIFPTVTHTFIWKINCPSKLKVFLWKAAHQGLPSFTVLH*ASLTPTAAQCSQCS 1126
            P     +     +   IW +  P K+K+F+W+A +  LP+   L    +  T   C +C 
Sbjct: 437  PNRPSSSKEDNNSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQT-PWCQRCR 495

Query: 1125 FEDEMNDHILFQCP*AIQVCTYLFTQFTSHADYGHQTIPPLPL-SINSLFIPTTHHKLPS 949
               E   H LF C  + ++  +  T F        + +  L    + SL +     +  +
Sbjct: 496  SHRETIFHSLFDCKASRKI--WKLTTF-------EEEVKALKCKDVLSLLLALADRRSKT 546

Query: 948  SIQTLCTSVFWNIWLTRNALIYQH 877
             ++ L  +V W+IW +RN  I+Q+
Sbjct: 547  EME-LIVAVCWSIWHSRNLFIFQN 569


>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
            [Citrus sinensis]
          Length = 968

 Score = 71.6 bits (174), Expect = 9e-10
 Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 6/204 (2%)
 Frame = -3

Query: 1470 QDHTWIHECVRQTLPTSTAVMTMAILLPSAPGQDILRWQRNSIGEYSVKSGYQLITAQQA 1291
            +D  W  + +RQ      A   + I LP     D + W  +  G YSVKSGYQL    + 
Sbjct: 580  EDQCWRDDVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKF 639

Query: 1290 P-----TIFPTVTHTFIWKINCPSKLKVFLWKAAHQGLPSFTVLH*ASLTPTAAQCSQCS 1126
            P     +     +   IW +  P K+K+F+W+A +  LP+   L    +  T   C +C 
Sbjct: 640  PNRPSSSKEDNNSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQT-PWCQRCR 698

Query: 1125 FEDEMNDHILFQCP*AIQVCTYLFTQFTSHADYGHQTIPPLPL-SINSLFIPTTHHKLPS 949
               E   H LF C  + ++  +  T F        + +  L    + SL +     +  +
Sbjct: 699  SHRETIFHSLFDCKASRKI--WKLTTF-------EEEVKALKCKDVLSLLLALADRRSKT 749

Query: 948  SIQTLCTSVFWNIWLTRNALIYQH 877
             ++ L  +V W+IW +RN  I+Q+
Sbjct: 750  EME-LIVAVCWSIWHSRNLFIFQN 772


>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 769

 Score = 71.6 bits (174), Expect = 9e-10
 Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 6/204 (2%)
 Frame = -3

Query: 1470 QDHTWIHECVRQTLPTSTAVMTMAILLPSAPGQDILRWQRNSIGEYSVKSGYQLITAQQA 1291
            +D  W  + +RQ      A   + I LP     D + W  +  G YSVKSGYQL    + 
Sbjct: 377  EDQCWRDDVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKF 436

Query: 1290 P-----TIFPTVTHTFIWKINCPSKLKVFLWKAAHQGLPSFTVLH*ASLTPTAAQCSQCS 1126
            P     +     +   IW +  P K+K+F+W+A +  LP+   L    +  T   C +C 
Sbjct: 437  PNRPSSSKEDNNSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQT-PWCQRCR 495

Query: 1125 FEDEMNDHILFQCP*AIQVCTYLFTQFTSHADYGHQTIPPLPL-SINSLFIPTTHHKLPS 949
               E   H LF C  + ++  +  T F        + +  L    + SL +     +  +
Sbjct: 496  SHRETIFHSLFDCKASRKI--WKLTTF-------EEEVKALKCKDVLSLLLALADRRSKT 546

Query: 948  SIQTLCTSVFWNIWLTRNALIYQH 877
             ++ L  +V W+IW +RN  I+Q+
Sbjct: 547  EME-LIVAVCWSIWHSRNLFIFQN 569


>ref|XP_006285450.1| hypothetical protein CARUB_v10006875mg, partial [Capsella rubella]
            gi|482554155|gb|EOA18348.1| hypothetical protein
            CARUB_v10006875mg, partial [Capsella rubella]
          Length = 438

 Score = 71.6 bits (174), Expect = 9e-10
 Identities = 57/211 (27%), Positives = 88/211 (41%), Gaps = 10/211 (4%)
 Frame = -3

Query: 1458 WIHECVRQTLPTSTAVMTMAILLPSAPGQDILRWQRNSIGEYSVKSGY----QLITAQQA 1291
            W    + + + T    +   I LP  P  D   W     GEYSVKSGY     L   + A
Sbjct: 34   WDSHQLHRYIDTHDHHLIQKIFLPQVPMVDDYLWSYTKDGEYSVKSGYWKALSLQREEHA 93

Query: 1290 PTIFPTVTH----TFIWKINCPSKLKVFLWKAAHQGLPSFTVLH*ASLTPTAAQCSQCSF 1123
            P + P  T     + IW++N   KLK FLW+ A + +     L   ++      CS C  
Sbjct: 94   P-VAPLATSPDIASTIWQLNIAPKLKHFLWRLASRAIGVADNLRRRNIN-INPYCSWCCS 151

Query: 1122 EDEMNDHILFQCP*AIQVCTYLFTQFTSHADYGHQTIPPLPLSINSLFIPTTHH--KLPS 949
            + E ++HI F CP    +   +    T   D      P + L     ++   H+   LP 
Sbjct: 152  DFESSEHIFFTCPRVHPIWRMVGVPLTLLGD------PNISLEDKLRYLFRLHNDSSLPI 205

Query: 948  SIQTLCTSVFWNIWLTRNALIYQHSTISPQK 856
              +T    V W +W TRN L++   + + ++
Sbjct: 206  FKRTSPFLVLWRLWKTRNNLVFNRKSTTTEE 236


>ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 494

 Score = 71.2 bits (173), Expect = 1e-09
 Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 6/212 (2%)
 Frame = -3

Query: 1476 KSQDHTWIHECVRQTLPTSTAVMTMAILLPSAPGQDILRWQRNSIGEYSVKSGYQLITAQ 1297
            +  ++ W  + ++Q      A    +I LP    +D + W  +  G+Y++KSGYQ+    
Sbjct: 132  RDNENNWKTDLIQQNFVKEDAKADQSIPLPRRQSEDEVIWHYDKRGKYTMKSGYQVALKL 191

Query: 1296 QAP------TIFPTVTHTFIWKINCPSKLKVFLWKAAHQGLPSFTVLH*ASLTPTAAQCS 1135
            + P          +   + IWK+  P+K+K+F+W+AA   LP+   L    +    A C 
Sbjct: 192  KFPYSPNCSNSSSSSNWSVIWKLTLPAKIKIFIWRAAKNLLPTAENLWKRKIV-HEAYCK 250

Query: 1134 QCSFEDEMNDHILFQCP*AIQVCTYLFTQFTSHADYGHQTIPPLPLSINSLFIPTTHHKL 955
            +C    E   H L  C  A +V   L    +S  + G+  I      +  L       KL
Sbjct: 251  RCGNRVENTLHALITCKAAKKV-WQLSPMASSFQEMGNPDI------LGDL----GGKKL 299

Query: 954  PSSIQTLCTSVFWNIWLTRNALIYQHSTISPQ 859
              +   +  ++ W IW  RN L+++   + P+
Sbjct: 300  SRADMEMLMTILWVIWYDRNKLVFEDLKLDPR 331


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 54/216 (25%), Positives = 85/216 (39%), Gaps = 17/216 (7%)
 Frame = -3

Query: 1458 WIHECVRQTLPTSTAVMTMAILLP-SAPGQDILRWQRNSIGEYSVKSGYQLITAQQAPTI 1282
            W    +   LPT+   M  A  +  ++  +D L W  ++ G  +V S Y LI        
Sbjct: 976  WDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSLIAGHDGDDR 1035

Query: 1281 FPTVTHTFIWKINCPSKLKVFLWKAAHQGLPSFTVLH*ASLTPTAAQCSQCSFEDEMNDH 1102
                +H +IW+  C  K+K+F+WK    GL    V         AA C  C  EDE  DH
Sbjct: 1036 ----SHDWIWRATCTEKIKLFMWKIVKNGL-MVNVERKRRGLADAASCPVCGEEDETLDH 1090

Query: 1101 ILFQCP*AIQVCTYLFTQFTSHADYGHQTIPPLPLSINSLFIPTTHHKLPSSIQTLCTS- 925
            +  +C  A + C                 +PPL       F  + H  + S ++  C+S 
Sbjct: 1091 LFRRCLLA-EAC-------------WDSAVPPL------TFQTSNHLHMHSWMKAACSSQ 1130

Query: 924  ---------------VFWNIWLTRNALIYQHSTISP 862
                           + WN+W  RN L++ ++  +P
Sbjct: 1131 QKDGYGTNWSLIFPYILWNLWKARNRLVFDNNITAP 1166


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 54/216 (25%), Positives = 85/216 (39%), Gaps = 17/216 (7%)
 Frame = -3

Query: 1458 WIHECVRQTLPTSTAVMTMAILLP-SAPGQDILRWQRNSIGEYSVKSGYQLITAQQAPTI 1282
            W    +   LPT+   M  A  +  ++  +D L W  ++ G  +V S Y LI        
Sbjct: 976  WDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSLIAGHDGDDR 1035

Query: 1281 FPTVTHTFIWKINCPSKLKVFLWKAAHQGLPSFTVLH*ASLTPTAAQCSQCSFEDEMNDH 1102
                +H +IW+  C  K+K+F+WK    GL    V         AA C  C  EDE  DH
Sbjct: 1036 ----SHDWIWRATCTEKIKLFMWKIVKNGL-MVNVERKRRGLADAASCPVCGEEDETLDH 1090

Query: 1101 ILFQCP*AIQVCTYLFTQFTSHADYGHQTIPPLPLSINSLFIPTTHHKLPSSIQTLCTS- 925
            +  +C  A + C                 +PPL       F  + H  + S ++  C+S 
Sbjct: 1091 LFRRCLLA-EAC-------------WDSAVPPL------TFQTSNHLHMHSWMKAACSSQ 1130

Query: 924  ---------------VFWNIWLTRNALIYQHSTISP 862
                           + WN+W  RN L++ ++  +P
Sbjct: 1131 QKDGYSTNWSLIFPYILWNLWKARNRLVFDNNITAP 1166


>ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623801 [Citrus sinensis]
          Length = 441

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 6/204 (2%)
 Frame = -3

Query: 1470 QDHTWIHECVRQTLPTSTAVMTMAILLPSAPGQDILRWQRNSIGEYSVKSGYQLITAQQA 1291
            ++  W  E + Q      A M + I LP+ P  D   W  +  G+YSVKSGYQ+    + 
Sbjct: 49   ENQNWKKEMIYQHFMKEDAAMIVRIQLPNTPKPDQYLWHYDKYGQYSVKSGYQIALKLKC 108

Query: 1290 PTIFPTVTHT------FIWKINCPSKLKVFLWKAAHQGLPSFTVLH*ASLTPTAAQCSQC 1129
            P   P  + +       IW    P K+K+F+W+A    LP+ + L    +  +   C +C
Sbjct: 109  PN-SPCSSDSSLSQWNVIWAAELPEKIKIFMWRAVKNLLPTTSNLWRRKIVGSPI-CRRC 166

Query: 1128 SFEDEMNDHILFQCP*AIQVCTYLFTQFTSHADYGHQTIPPLPLSINSLFIPTTHHKLPS 949
              ++E   H L  C  A +V          +A    +    +   + ++ +     K   
Sbjct: 167  GVKNEDVIHALLDCKVAKKV--------WRNAGCAEEIEKLVQQDLMAVLVEIQRKKGKK 218

Query: 948  SIQTLCTSVFWNIWLTRNALIYQH 877
             ++ L   + W IW +RN  I+++
Sbjct: 219  ELE-LIVVLCWTIWYSRNLFIFEN 241


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 10/218 (4%)
 Frame = -3

Query: 1479 IKSQDHTWIHECVRQTLPTSTAVMTMAILLPSAPGQDILRWQRNSIGEYSVKSGY---QL 1309
            I S+ + W  + +++        +  A+ + +   +D L W     G Y+VKSGY   +L
Sbjct: 749  IDSRSNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHFTKAGNYTVKSGYHTARL 808

Query: 1308 ITAQQAPTIFPTVT--HTFIWKINCPSKLKVFLWKAAHQGLPSFTVLH*ASLTPTAAQCS 1135
               +    I P +T    +IWK+ CP KL+ FLW+     +P    L    +      C 
Sbjct: 809  DLNEGTTLIGPDLTTLKAYIWKVQCPPKLRHFLWQILSGCVPVSENLRKRGILCDKG-CV 867

Query: 1134 QCSFEDEMNDHILFQCP*AIQVCTYLFTQFTSHADYGHQTIPPLP--LSINSLFIPTTH- 964
             C   +E  +H LFQC  A Q+             +    IP  P     NS+F    H 
Sbjct: 868  SCGASEESINHTLFQCHPARQI-------------WALSQIPTAPGIFPSNSIFTNLDHL 914

Query: 963  -HKLPSSIQTL-CTSVFWNIWLTRNALIYQHSTISPQK 856
              ++PS + +     + W IW  RN  ++++    P +
Sbjct: 915  FWRIPSGVDSAPYPWIIWYIWKARNEKVFENVDKDPME 952


>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1319

 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
 Frame = -3

Query: 1389 PSAPGQDILRWQRNSIGEYSVKSGYQLITAQQAPTIF------PTVTHTF--IWKINCPS 1234
            P    +D   W   + G Y+VKSGY+  + +    +F      P+V   F  +W +    
Sbjct: 946  PLISSEDSYCWAGTNNGLYTVKSGYERSSRETFKNLFKEADVYPSVNPLFDKVWSLETVP 1005

Query: 1233 KLKVFLWKAAHQGLPSFTVLH*ASLTPTAAQCSQCSFEDEMNDHILFQCP*AIQVCTYLF 1054
            K+KVF+WKA    L     L    +  TA  C  C  E E  +H+LFQCP A QV     
Sbjct: 1006 KIKVFMWKALKGALAVEDRLRSRGIR-TADGCLFCKEEIETINHLLFQCPFARQVWALSL 1064

Query: 1053 TQFTSHADYGHQTIPPLPLSINSLFIPTTHHKLPSSIQTLCTSVFWNIWLTRNALIYQ 880
             Q  +   +G         +IN +   + +  +P  ++T+   + W IW  RN  ++Q
Sbjct: 1065 IQAPA-TGFGTSIFS----NINHVIQNSQNFGIPRHMRTVSPWLLWEIWKNRNKTLFQ 1117


>ref|XP_004292563.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 504

 Score = 64.7 bits (156), Expect(2) = 7e-09
 Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 22/199 (11%)
 Frame = -3

Query: 1392 LPSAPGQ--DILRWQRNSIGEYSVKSGYQL----ITAQQAPTI-----FPTVTHTFIWKI 1246
            +P   G+  D   W  N IG Y+V+SGY      ++  +AP+I     F       +W I
Sbjct: 151  IPIGDGEVLDCFLWPWNKIGVYTVRSGYHWYHTSMSIPRAPSIGSSHQFDPKIWKILWSI 210

Query: 1245 NCPSKLKVFLWKAAHQGLPSFTVLH*ASLTPTAAQCSQCSFEDEMNDHILFQCP*AIQVC 1066
                K+++FLW+  H   P+   LH   +      C  C   +E  +H+L  C       
Sbjct: 211  KTLPKVRIFLWRVLHGAAPTMHSLHKRKIVSNPL-CPVCGKTEETFEHLLLLC------- 262

Query: 1065 TYLFTQFTSHADYGHQTIPPLPLSINSLFIPT-------THHKLPSS----IQTLCTSVF 919
                  + +   +G     PL + I+   I T        ++  PSS    + TL +++ 
Sbjct: 263  -----HWVNPIWFGS----PLGIRIDKRKITTFDRWLISIYNHCPSSEREAVLTLISTIC 313

Query: 918  WNIWLTRNALIYQHSTISP 862
            W IW  R   +YQH  +SP
Sbjct: 314  WAIWKERCHFVYQHREVSP 332



 Score = 23.9 bits (50), Expect(2) = 7e-09
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 14/87 (16%)
 Frame = -1

Query: 767 RNHTSTRSHYTISVRWLPPRLDHLKLKTDVD---------GMLIR-----AFAASPIGCS 630
           RN    R H    ++WLPP   H K+ +D           G++IR       A S +   
Sbjct: 354 RNSRVPRLH----MQWLPPPFGHHKINSDASWFPPDHTGVGIVIRDSNRVMIAGSSLLKK 409

Query: 629 TALVADVWAALFGLHLALESSLKIQAV 549
              V D  A    +   L +SL++Q +
Sbjct: 410 CGSVTDAKAVALLVGSELVASLQLQNI 436


>ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis]
          Length = 1238

 Score = 68.2 bits (165), Expect = 9e-09
 Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 6/204 (2%)
 Frame = -3

Query: 1470 QDHTWIHECVRQTLPTSTAVMTMAILLPSAPGQDILRWQRNSIGEYSVKSGYQLITAQQA 1291
            ++  W  E + Q      A M + I LP  P  D   W  +  G+YSVKSGYQ+    + 
Sbjct: 846  ENQNWKKEMIYQHFMKEDAAMIVRIQLPKTPKPDQYLWHYDKYGQYSVKSGYQIALKLKC 905

Query: 1290 PTIFPTVTHT------FIWKINCPSKLKVFLWKAAHQGLPSFTVLH*ASLTPTAAQCSQC 1129
            P   P  + +       IW    P K+K+F+W+A    LP+ + L    +  +   C +C
Sbjct: 906  PN-SPCSSDSSLSQWNVIWAAELPEKIKIFMWRAVKNLLPTASNLWRRKIVGSPI-CRRC 963

Query: 1128 SFEDEMNDHILFQCP*AIQVCTYLFTQFTSHADYGHQTIPPLPLSINSLFIPTTHHKLPS 949
              ++E   H L  C  A +V          +A    +    +   + ++ +     K   
Sbjct: 964  GVKNEDVIHALLDCKVAKKV--------WRNAGCAEEIEKLVQQDLMAVLVEIQRKKGKK 1015

Query: 948  SIQTLCTSVFWNIWLTRNALIYQH 877
             ++ L   + W IW ++N  I+++
Sbjct: 1016 ELE-LIVVLCWTIWYSQNLFIFEN 1038


>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
          Length = 438

 Score = 68.2 bits (165), Expect = 9e-09
 Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 7/182 (3%)
 Frame = -3

Query: 1374 QDILRWQRNSIGEYSVKSGYQLITAQQAPT--IFPTVTHTFIWKINCPSKLKVFLWKAAH 1201
            +D L W +N  G YS KSG+  +   + P   I P  + ++IW +  P K K  +W A  
Sbjct: 82   EDALIWSQNKNGTYSTKSGFHWLLTFRVPATDIIPHPSWSWIWNLQVPEKYKFLIWLACQ 141

Query: 1200 QGLPSFTVLH*ASLTPTAAQCSQCSFEDEMNDHILFQCP*AIQVCTYLFTQFTSHADYGH 1021
              +P+ ++LH  ++ P+   C++C  EDE   H +  C                   +  
Sbjct: 142  NVVPTLSLLHRRNIAPSPT-CARCGEEDETFLHCVRDC------------------HFSR 182

Query: 1020 QTIPPLPLSINSLFIPTTHHK-----LPSSIQTLCTSVFWNIWLTRNALIYQHSTISPQK 856
                 +  + N  F  T+ H      + SS+  +     W  W  RN +   + T+S  +
Sbjct: 183  SIWQKIGFTGNDFFTATSAHDWFKIGMSSSLPDIFFGGLWWAWRHRNLMCLNNETMSLFR 242

Query: 855  YC 850
             C
Sbjct: 243  LC 244


>ref|XP_007010730.1| Ribonuclease H protein, putative [Theobroma cacao]
            gi|508727643|gb|EOY19540.1| Ribonuclease H protein,
            putative [Theobroma cacao]
          Length = 288

 Score = 67.4 bits (163), Expect = 2e-08
 Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
 Frame = -3

Query: 1458 WIHECVRQTLPTSTAVMTMAILL-PSAPGQDILRWQRNSIGEYSVKSGYQLITAQQAPTI 1282
            W  E V+Q LP +  +M  A+++ PS    D   W  +S G +++KS Y++   Q +  I
Sbjct: 89   WNLESVKQLLPQNLILMISAMMIDPSGEEMDDSYWLHSSTGMFTIKSTYEM---QISDPI 145

Query: 1281 FPTVTHTFIWKINCPSKLKVFLWKAAHQGLPSFTVLH*ASLTPTAAQCSQCSFEDEMNDH 1102
              T+    +W +N  +K+++F+W+  H  LP+ + L    L  +   C  C + +E   H
Sbjct: 146  HQTICWKKVWALNSSNKVRMFVWRVLHDSLPTASWLQNRGLVYSPV-CLSCGYSEEQLIH 204

Query: 1101 ILFQC 1087
            +L  C
Sbjct: 205  VLHDC 209


>ref|XP_006492478.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
            [Citrus sinensis] gi|568879016|ref|XP_006492479.1|
            PREDICTED: putative ribonuclease H protein At1g65750-like
            isoform X2 [Citrus sinensis]
          Length = 320

 Score = 66.6 bits (161), Expect = 3e-08
 Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 6/181 (3%)
 Frame = -3

Query: 1404 MAILLPSAPGQDILRWQRNSIGEYSVKSGYQLITAQQAPTIFPTVTHT------FIWKIN 1243
            M I LPS P +D L W  +  G YSVKSGYQL    + P   P  +++       IWK+ 
Sbjct: 1    MRIPLPSEPKEDELLWHYDKKGNYSVKSGYQLAFTIKFPN-KPCYSNSDFQGWQTIWKLG 59

Query: 1242 CPSKLKVFLWKAAHQGLPSFTVLH*ASLTPTAAQCSQCSFEDEMNDHILFQCP*AIQVCT 1063
             P K+K+FLW+     LP+   L    +      C  C  E E   H L       ++  
Sbjct: 60   NPEKVKIFLWRTTKNLLPTMENLWKRKVVQEPI-CQICKKELENISHALLD----YKLAK 114

Query: 1062 YLFTQFTSHADYGHQTIPPLPLSINSLFIPTTHHKLPSSIQTLCTSVFWNIWLTRNALIY 883
             ++      A+  ++ I      + SL       KL +    L + V+W +W  RN +IY
Sbjct: 115  KMWRHTHIAAEVQNEAIQDFLSMLQSL-----TKKLTTREIELASFVWWGVWNARNKVIY 169

Query: 882  Q 880
            +
Sbjct: 170  E 170


>ref|XP_002462405.1| hypothetical protein SORBIDRAFT_02g025125 [Sorghum bicolor]
            gi|241925782|gb|EER98926.1| hypothetical protein
            SORBIDRAFT_02g025125 [Sorghum bicolor]
          Length = 457

 Score = 66.6 bits (161), Expect = 3e-08
 Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
 Frame = -3

Query: 1476 KSQDHTWIHECVRQTLPTSTAVMTMAILLPSAPGQDILRWQRNSIGEYSVKSGYQLITA- 1300
            + Q  +W+ E + + +    A++   I   S    DI  W+    G YSVKS Y+LI   
Sbjct: 104  EGQSVSWVSELLSENVDAE-AILRTPIRFQS---DDIWAWEPEKHGVYSVKSAYRLIDKG 159

Query: 1299 ------QQAPTIFPTVTHTFIWKINCPSKLKVFLWKAAHQGLPSFTVLH*ASLTPTAAQC 1138
                  Q+A         + IWK+  P K+KVF W+  H+ LP+   LH   + P  A C
Sbjct: 160  RTNGGHQEAVGGSGNSCWSEIWKLKVPPKVKVFWWRVLHEFLPTRLALHRKHIEP-IANC 218

Query: 1137 SQCSFEDEMNDHILFQC 1087
              C  + E   H+L +C
Sbjct: 219  DACGADSESIQHVLMEC 235