BLASTX nr result

ID: Papaver25_contig00032664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00032664
         (461 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD83326.1| Fgenesh protein 115 [Beta vulgaris]                     58   2e-06
ref|XP_004292837.1| PREDICTED: F-box protein At3g07870-like [Fra...    55   8e-06

>gb|ABD83326.1| Fgenesh protein 115 [Beta vulgaris]
          Length = 428

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
 Frame = +3

Query: 204 MIFVGSCNGLICLAGYPHPSVCICNPITREWVML--QELKRDYSCDVDKTTNFGYVSSKN 377
           ++FVGSCNGLICLA        + NPIT ++      EL  DYSC    +  FGYVS+ +
Sbjct: 108 LVFVGSCNGLICLASSFGCYFILWNPITGKFQKYSGDELVIDYSCPFRVSWGFGYVSNAD 167

Query: 378 EYKVLKTF-LLKNETVNVYIYTLGS 449
           +YKV++   L     + V +++L S
Sbjct: 168 DYKVIRILELAATLEIRVLVFSLKS 192


>ref|XP_004292837.1| PREDICTED: F-box protein At3g07870-like [Fragaria vesca subsp.
           vesca]
          Length = 426

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
 Frame = +3

Query: 219 SCNGLICLAGYPHPSVCICNPITREWVMLQELKRDYSCDVDKTTNFGYVSSKNEYKVLKT 398
           SCNG ICL G    S+ +CNP+  E++ +     +    +      G+ S  NEYK+L+T
Sbjct: 143 SCNGFICLCGTQVSSMIVCNPLLNEYITVLTTNNN---KLGNLGGLGWSSVTNEYKLLRT 199

Query: 399 FLL---KNETVNVYIYTLGSGI 455
           F     +  T+   +YT+GSG+
Sbjct: 200 FYRAPGERNTLEAEVYTIGSGV 221


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