BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00032635
         (736 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22720.3| unnamed protein product [Vitis vinifera]              256   7e-66
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...   241   1e-61
emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera]   226   6e-57
emb|CBI26210.3| unnamed protein product [Vitis vinifera]              213   6e-53
ref|XP_007038705.1| RNA polymerase III subunit RPC82 family prot...   211   3e-52
ref|XP_007038704.1| RNA polymerase III subunit RPC82 family prot...   211   3e-52
emb|CAN75989.1| hypothetical protein VITISV_012194 [Vitis vinifera]   208   2e-51
ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III s...   204   3e-50
ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III s...   202   1e-49
ref|XP_006490401.1| PREDICTED: DNA-directed RNA polymerase III s...   200   4e-49
ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III s...   200   4e-49
ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citr...   200   4e-49
ref|XP_006421932.1| hypothetical protein CICLE_v10004721mg [Citr...   200   4e-49
ref|XP_006421931.1| hypothetical protein CICLE_v10004721mg [Citr...   200   4e-49
ref|XP_006374620.1| hypothetical protein POPTR_0015s13040g [Popu...   200   4e-49
ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protei...   200   4e-49
gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Mor...   195   1e-47
ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prun...   184   4e-44
ref|XP_002510780.1| DNA-directed RNA polymerase III 62 kDa polyp...   179   9e-43
ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III s...   172   8e-41

>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  256 bits (653), Expect = 7e-66
 Identities = 130/234 (55%), Positives = 169/234 (72%)
 Frame = -2

Query: 735 MVLQNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQ 556
           M  Q G++LA  LI ++F +LV KVCDCLLRKG LTL  +IR+TELP QQVK+C+LVLIQ
Sbjct: 1   MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 555 HNCVLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGL 376
           HNCV  F +Q+E G GE  + V  Y ALF NILHRMRF KFLA+V+EELDKEC+E+ EGL
Sbjct: 61  HNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 120

Query: 375 VQHGRLSLEQLILRAIPEPNQGNIALQDGIRASFVKLVEAHYVERCPDFKPSIPIPPQDG 196
           +QHGRL+LEQ++ RA    ++G   +QD +R SF+KLV AH+VERCP  +P +  PP + 
Sbjct: 121 LQHGRLTLEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASEPFL-APPSEE 179

Query: 195 STSTAKRGAKSSKLADQREKTQEEQAIAMATCSEGRRFDITINYGTDVKSGTRI 34
            T   KRGAKS+KL ++  +T E++AIA A   + +RF + IN GTDV     +
Sbjct: 180 ETPARKRGAKSAKLVEE-PQTIEQRAIAAAAPMDAKRFSVIINTGTDVDDSPNV 232


>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
           vinifera]
          Length = 511

 Score =  241 bits (616), Expect = 1e-61
 Identities = 128/228 (56%), Positives = 165/228 (72%)
 Frame = -2

Query: 735 MVLQNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQ 556
           M  Q G++LA  LI ++F +LV KVCDCLLRKG LTL  +IR+TELP QQVK+C+LVLIQ
Sbjct: 1   MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 555 HNCVLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGL 376
           HNCV  F +Q+E       + V  Y ALF NILHRMRF KFLA+V+EELDKEC+E+ EGL
Sbjct: 61  HNCVQAFAIQQEA-----PRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 115

Query: 375 VQHGRLSLEQLILRAIPEPNQGNIALQDGIRASFVKLVEAHYVERCPDFKPSIPIPPQDG 196
           +QHGRL+LEQ++ RA  + NQ    +QD +R SF+KLV AH+VERCP  +P +  PP + 
Sbjct: 116 LQHGRLTLEQILDRA--KSNQREPVVQDALRESFLKLVRAHFVERCPASEPFL-APPSEE 172

Query: 195 STSTAKRGAKSSKLADQREKTQEEQAIAMATCSEGRRFDITINYGTDV 52
            T   KRGAKS+KL ++  +T E++AIA A   + +RF + IN GTDV
Sbjct: 173 ETPARKRGAKSAKLVEE-PQTIEQRAIAAAAPMDAKRFSVIINTGTDV 219


>emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera]
          Length = 721

 Score =  226 bits (576), Expect = 6e-57
 Identities = 115/193 (59%), Positives = 144/193 (74%)
 Frame = -2

Query: 735 MVLQNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQ 556
           M  Q G++LA  LI ++F +LV KVCDCLLRKG  TL  +IR+TELP QQVK+C+LVLIQ
Sbjct: 1   MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTXTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 555 HNCVLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGL 376
           HNCV  F +Q+E G GE  + V  Y ALF NILHRMRF KFLA+V+EELDKEC+E+ EGL
Sbjct: 61  HNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 120

Query: 375 VQHGRLSLEQLILRAIPEPNQGNIALQDGIRASFVKLVEAHYVERCPDFKPSIPIPPQDG 196
           +QHGRL+LEQ++ RA  + NQ    +QD +R SF+KLV AH+VERCP  +P +  PP + 
Sbjct: 121 LQHGRLTLEQILDRA--KSNQREPVVQDALRESFLKLVRAHFVERCPASEPFL-APPSEE 177

Query: 195 STSTAKRGAKSSK 157
            T   KRGAKS+K
Sbjct: 178 ETPARKRGAKSAK 190


>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  213 bits (542), Expect = 6e-53
 Identities = 119/246 (48%), Positives = 156/246 (63%), Gaps = 1/246 (0%)
 Frame = -2

Query: 735 MVLQNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQ 556
           M  + GIKLA  LI  +F D   KVCDCLLRKG L L +++R  +L  QQVK  L VLIQ
Sbjct: 1   MTPEYGIKLAVHLISTDFGDHAAKVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQ 60

Query: 555 HNCVLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGL 376
           HNCV  F ++ EGG GE    V  Y  LFDNILHRMRF K LA+V++ELDKEC+ELFE  
Sbjct: 61  HNCVQAFAMEHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEAF 120

Query: 375 VQHGRLSLEQLILRAIPEPNQGNIALQDGIRASFVKLVEAHYVERCPDFKPSIPIPPQDG 196
           ++HG L+L+Q++ R     N+GN  +QD +R SF KLV AHYVERCP   P + +PP + 
Sbjct: 121 LKHGWLTLQQILDRVPSNQNEGNCTVQDALRGSFTKLVNAHYVERCPAPDPFL-VPPDEE 179

Query: 195 STSTAKRGAKSSKLADQREKTQEEQAIAMATCSEGRRFDITINYGTDVKSGTRIEGNAP- 19
            T   K  A S+K  ++ E   E+  IA AT S+ + F +  +   D+ +G +  GN P 
Sbjct: 180 KTPARKHDANSAKAVEELE-IGEQCDIAKATPSKAKGFPVITDTCGDI-NGDKSIGNPPG 237

Query: 18  ISIGEK 1
           + IG+K
Sbjct: 238 VVIGKK 243


>ref|XP_007038705.1| RNA polymerase III subunit RPC82 family protein, putative isoform 2
           [Theobroma cacao] gi|508775950|gb|EOY23206.1| RNA
           polymerase III subunit RPC82 family protein, putative
           isoform 2 [Theobroma cacao]
          Length = 463

 Score =  211 bits (536), Expect = 3e-52
 Identities = 113/245 (46%), Positives = 160/245 (65%)
 Frame = -2

Query: 735 MVLQNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQ 556
           MV Q+GIK A  LI  +F DLV KVC+CLLRKG LTL  ++R+TEL S QVKN LLVLIQ
Sbjct: 1   MVTQHGIKYAVLLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQ 60

Query: 555 HNCVLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGL 376
           HNCV  F +++ G  G+  K    Y ALF+NI+HR RF KFL +V+++LDK+C EL E L
Sbjct: 61  HNCVQAFILEQPGSHGDGAKLNSQYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELIEAL 120

Query: 375 VQHGRLSLEQLILRAIPEPNQGNIALQDGIRASFVKLVEAHYVERCPDFKPSIPIPPQDG 196
           + HGRL+L+Q+  RA    N+G+  + D +R +F+KL+ AH+VERCP  +P +  P ++ 
Sbjct: 121 LLHGRLTLKQMSDRAKSAQNEGDDVILDAVREAFIKLLNAHFVERCPAAEPVLTKPTEE- 179

Query: 195 STSTAKRGAKSSKLADQREKTQEEQAIAMATCSEGRRFDITINYGTDVKSGTRIEGNAPI 16
            TS  KR  KS+K+ + +E T E++ +  AT SE  RF +          G     ++ +
Sbjct: 180 ETSARKRVPKSAKILEGKE-TLEQRVLEAATPSEALRFLLVTRTEPAADGGKDENNSSSM 238

Query: 15  SIGEK 1
           ++G+K
Sbjct: 239 TVGKK 243


>ref|XP_007038704.1| RNA polymerase III subunit RPC82 family protein, putative isoform 1
           [Theobroma cacao] gi|508775949|gb|EOY23205.1| RNA
           polymerase III subunit RPC82 family protein, putative
           isoform 1 [Theobroma cacao]
          Length = 523

 Score =  211 bits (536), Expect = 3e-52
 Identities = 113/245 (46%), Positives = 160/245 (65%)
 Frame = -2

Query: 735 MVLQNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQ 556
           MV Q+GIK A  LI  +F DLV KVC+CLLRKG LTL  ++R+TEL S QVKN LLVLIQ
Sbjct: 1   MVTQHGIKYAVLLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQ 60

Query: 555 HNCVLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGL 376
           HNCV  F +++ G  G+  K    Y ALF+NI+HR RF KFL +V+++LDK+C EL E L
Sbjct: 61  HNCVQAFILEQPGSHGDGAKLNSQYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELIEAL 120

Query: 375 VQHGRLSLEQLILRAIPEPNQGNIALQDGIRASFVKLVEAHYVERCPDFKPSIPIPPQDG 196
           + HGRL+L+Q+  RA    N+G+  + D +R +F+KL+ AH+VERCP  +P +  P ++ 
Sbjct: 121 LLHGRLTLKQMSDRAKSAQNEGDDVILDAVREAFIKLLNAHFVERCPAAEPVLTKPTEE- 179

Query: 195 STSTAKRGAKSSKLADQREKTQEEQAIAMATCSEGRRFDITINYGTDVKSGTRIEGNAPI 16
            TS  KR  KS+K+ + +E T E++ +  AT SE  RF +          G     ++ +
Sbjct: 180 ETSARKRVPKSAKILEGKE-TLEQRVLEAATPSEALRFLLVTRTEPAADGGKDENNSSSM 238

Query: 15  SIGEK 1
           ++G+K
Sbjct: 239 TVGKK 243


>emb|CAN75989.1| hypothetical protein VITISV_012194 [Vitis vinifera]
          Length = 549

 Score =  208 bits (529), Expect = 2e-51
 Identities = 118/245 (48%), Positives = 154/245 (62%), Gaps = 6/245 (2%)
 Frame = -2

Query: 735 MVLQNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQ 556
           M  + GIKLA  LI  +F D   KVCDCL+RKG L L +++R T+L  QQVK  L VLIQ
Sbjct: 1   MTPEYGIKLAVHLISTDFGDHAAKVCDCLIRKGTLALDDIVRTTKLSPQQVKTYLKVLIQ 60

Query: 555 HNCVLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGL 376
           HNCV  F ++ EGG GE    V  Y  LFDNILHRMRF K LA+V++ELDKEC++LFE  
Sbjct: 61  HNCVQAFAMEHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEKLFEAF 120

Query: 375 VQHGRLSLEQLILRAIPEPNQGNIALQDGIRASFVKLVEAHYVERCPDFKPSIPIPPQDG 196
           ++HG L+L+Q++ R     N+GN  +QD +R SF KLV AHYVERCP   P + +PP + 
Sbjct: 121 LKHGWLTLQQILDRVPSNQNEGNCTVQDALRGSFTKLVNAHYVERCPAPDPFL-VPPDEE 179

Query: 195 STSTAKRGAKSSK-LADQREKTQE----EQA-IAMATCSEGRRFDITINYGTDVKSGTRI 34
            T   K  A S+K L D  +  +E    EQ  IA AT S+ + F +  +   D+ +G + 
Sbjct: 180 KTPARKHDANSAKALTDSCQAVEELEIGEQCDIAKATPSKAKGFPVITDTCGDI-NGDKS 238

Query: 33  EGNAP 19
            GN P
Sbjct: 239 IGNPP 243


>ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like
           [Solanum tuberosum]
          Length = 525

 Score =  204 bits (519), Expect = 3e-50
 Identities = 112/218 (51%), Positives = 143/218 (65%)
 Frame = -2

Query: 735 MVLQNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQ 556
           MV  +GIKLA  LI + F DL  KVCDCLLR+G  TL +++  TEL    VKNCLLVLI 
Sbjct: 1   MVSPHGIKLAVYLISSYFGDLNAKVCDCLLRRGTQTLYQVVSSTELTRTNVKNCLLVLIH 60

Query: 555 HNCVLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGL 376
           HNCV  F +Q+ GG GE  K +  Y ALFDNI+H++RF KF+ +V+EE+ KEC+E+FEGL
Sbjct: 61  HNCVQAFALQQPGGFGEEPKVITQYMALFDNIIHKLRFPKFIEIVSEEMGKECEEIFEGL 120

Query: 375 VQHGRLSLEQLILRAIPEPNQGNIALQDGIRASFVKLVEAHYVERCPDFKPSIPIPPQDG 196
           +QHGRL+L ++I R      QG+ +  D  R SF  LV A +VERCP   P +  PP   
Sbjct: 121 LQHGRLTLTEIIERYKEASKQGD-SSADAARDSFNSLVNARFVERCPAPDPLLE-PPAAE 178

Query: 195 STSTAKRGAKSSKLADQREKTQEEQAIAMATCSEGRRF 82
            T+  KRGAKS+K+  Q   T E+QA+A A   E  RF
Sbjct: 179 ETAAKKRGAKSAKIQAQ---TMEQQALAAAAPMESMRF 213


>ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like
           [Solanum lycopersicum]
          Length = 525

 Score =  202 bits (513), Expect = 1e-49
 Identities = 109/218 (50%), Positives = 145/218 (66%)
 Frame = -2

Query: 735 MVLQNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQ 556
           MV  +GIKLA  LI + F +L  KVCDCLLR+G  TL +++  TEL  + VKNCLLVLI 
Sbjct: 1   MVSPHGIKLAVYLISSYFGELNAKVCDCLLRRGTQTLHQVVSSTELSRKNVKNCLLVLIH 60

Query: 555 HNCVLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGL 376
           HNCV  F +++ GG GE  K +  Y ALFDNI+H++RF KF+ +V+EEL KEC+E+ E L
Sbjct: 61  HNCVQAFAIRQPGGFGEEAKIITQYMALFDNIIHKLRFPKFIEIVSEELGKECEEILEWL 120

Query: 375 VQHGRLSLEQLILRAIPEPNQGNIALQDGIRASFVKLVEAHYVERCPDFKPSIPIPPQDG 196
           +QHGRLSL Q+I++      QG+ +  D  + SF +LV A +VERCP   P +  PP + 
Sbjct: 121 LQHGRLSLSQIIVKYKQASKQGD-SSADAAQDSFNRLVNARFVERCPAPDPLLE-PPAEE 178

Query: 195 STSTAKRGAKSSKLADQREKTQEEQAIAMATCSEGRRF 82
            T+  KRGAKS+K+  Q   T E+QA+A A   E  RF
Sbjct: 179 ETAAKKRGAKSAKIQAQ---TMEQQALAAAAPMESMRF 213


>ref|XP_006490401.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
           isoform X3 [Citrus sinensis]
          Length = 444

 Score =  200 bits (509), Expect = 4e-49
 Identities = 111/246 (45%), Positives = 155/246 (63%), Gaps = 1/246 (0%)
 Frame = -2

Query: 735 MVLQNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQ 556
           M+ + G K A  +I  +F DLV KVC+CLLRKG LT   + RYTEL  +QVKN LLVLIQ
Sbjct: 1   MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 555 HNCVLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGL 376
            NCV  FT ++  G  +  K    Y  LFDNILHR+RF KFL ++++E D++C EL +GL
Sbjct: 61  QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 375 VQHGRLSLEQLILRAIPEPNQGNIALQDGIRASFVKLVEAHYVERCPDFKPSI-PIPPQD 199
           ++HGRL+L+Q+  RA     +GN+   D +R + VKLV AHYVERCP  +P + PI  ++
Sbjct: 121 LEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEE 180

Query: 198 GSTSTAKRGAKSSKLADQREKTQEEQAIAMATCSEGRRFDITINYGTDVKSGTRIEGNAP 19
           G     K+G+KS+K   + E T E+Q +  A   E  RF +  N  +DV  G + + +  
Sbjct: 181 G--PARKKGSKSAKKIGEPE-TIEQQVVEAALPMEAMRFSVVTNVESDV--GEKEKNSNN 235

Query: 18  ISIGEK 1
           ++ GEK
Sbjct: 236 VTPGEK 241


>ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
           isoform X2 [Citrus sinensis]
          Length = 512

 Score =  200 bits (509), Expect = 4e-49
 Identities = 111/246 (45%), Positives = 155/246 (63%), Gaps = 1/246 (0%)
 Frame = -2

Query: 735 MVLQNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQ 556
           M+ + G K A  +I  +F DLV KVC+CLLRKG LT   + RYTEL  +QVKN LLVLIQ
Sbjct: 1   MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 555 HNCVLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGL 376
            NCV  FT ++  G  +  K    Y  LFDNILHR+RF KFL ++++E D++C EL +GL
Sbjct: 61  QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 375 VQHGRLSLEQLILRAIPEPNQGNIALQDGIRASFVKLVEAHYVERCPDFKPSI-PIPPQD 199
           ++HGRL+L+Q+  RA     +GN+   D +R + VKLV AHYVERCP  +P + PI  ++
Sbjct: 121 LEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEE 180

Query: 198 GSTSTAKRGAKSSKLADQREKTQEEQAIAMATCSEGRRFDITINYGTDVKSGTRIEGNAP 19
           G     K+G+KS+K   + E T E+Q +  A   E  RF +  N  +DV  G + + +  
Sbjct: 181 G--PARKKGSKSAKKIGEPE-TIEQQVVEAALPMEAMRFSVVTNVESDV--GEKEKNSNN 235

Query: 18  ISIGEK 1
           ++ GEK
Sbjct: 236 VTPGEK 241


>ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
           gi|568874593|ref|XP_006490399.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC3-like isoform X1 [Citrus
           sinensis] gi|557523806|gb|ESR35173.1| hypothetical
           protein CICLE_v10004721mg [Citrus clementina]
          Length = 527

 Score =  200 bits (509), Expect = 4e-49
 Identities = 111/246 (45%), Positives = 155/246 (63%), Gaps = 1/246 (0%)
 Frame = -2

Query: 735 MVLQNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQ 556
           M+ + G K A  +I  +F DLV KVC+CLLRKG LT   + RYTEL  +QVKN LLVLIQ
Sbjct: 1   MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 555 HNCVLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGL 376
            NCV  FT ++  G  +  K    Y  LFDNILHR+RF KFL ++++E D++C EL +GL
Sbjct: 61  QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 375 VQHGRLSLEQLILRAIPEPNQGNIALQDGIRASFVKLVEAHYVERCPDFKPSI-PIPPQD 199
           ++HGRL+L+Q+  RA     +GN+   D +R + VKLV AHYVERCP  +P + PI  ++
Sbjct: 121 LEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEE 180

Query: 198 GSTSTAKRGAKSSKLADQREKTQEEQAIAMATCSEGRRFDITINYGTDVKSGTRIEGNAP 19
           G     K+G+KS+K   + E T E+Q +  A   E  RF +  N  +DV  G + + +  
Sbjct: 181 G--PARKKGSKSAKKIGEPE-TIEQQVVEAALPMEAMRFSVVTNVESDV--GEKEKNSNN 235

Query: 18  ISIGEK 1
           ++ GEK
Sbjct: 236 VTPGEK 241


>ref|XP_006421932.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
           gi|557523805|gb|ESR35172.1| hypothetical protein
           CICLE_v10004721mg [Citrus clementina]
          Length = 433

 Score =  200 bits (509), Expect = 4e-49
 Identities = 111/246 (45%), Positives = 155/246 (63%), Gaps = 1/246 (0%)
 Frame = -2

Query: 735 MVLQNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQ 556
           M+ + G K A  +I  +F DLV KVC+CLLRKG LT   + RYTEL  +QVKN LLVLIQ
Sbjct: 1   MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 555 HNCVLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGL 376
            NCV  FT ++  G  +  K    Y  LFDNILHR+RF KFL ++++E D++C EL +GL
Sbjct: 61  QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 375 VQHGRLSLEQLILRAIPEPNQGNIALQDGIRASFVKLVEAHYVERCPDFKPSI-PIPPQD 199
           ++HGRL+L+Q+  RA     +GN+   D +R + VKLV AHYVERCP  +P + PI  ++
Sbjct: 121 LEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEE 180

Query: 198 GSTSTAKRGAKSSKLADQREKTQEEQAIAMATCSEGRRFDITINYGTDVKSGTRIEGNAP 19
           G     K+G+KS+K   + E T E+Q +  A   E  RF +  N  +DV  G + + +  
Sbjct: 181 G--PARKKGSKSAKKIGEPE-TIEQQVVEAALPMEAMRFSVVTNVESDV--GEKEKNSNN 235

Query: 18  ISIGEK 1
           ++ GEK
Sbjct: 236 VTPGEK 241


>ref|XP_006421931.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
           gi|557523804|gb|ESR35171.1| hypothetical protein
           CICLE_v10004721mg [Citrus clementina]
          Length = 322

 Score =  200 bits (509), Expect = 4e-49
 Identities = 111/246 (45%), Positives = 155/246 (63%), Gaps = 1/246 (0%)
 Frame = -2

Query: 735 MVLQNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQ 556
           M+ + G K A  +I  +F DLV KVC+CLLRKG LT   + RYTEL  +QVKN LLVLIQ
Sbjct: 1   MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 555 HNCVLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGL 376
            NCV  FT ++  G  +  K    Y  LFDNILHR+RF KFL ++++E D++C EL +GL
Sbjct: 61  QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 375 VQHGRLSLEQLILRAIPEPNQGNIALQDGIRASFVKLVEAHYVERCPDFKPSI-PIPPQD 199
           ++HGRL+L+Q+  RA     +GN+   D +R + VKLV AHYVERCP  +P + PI  ++
Sbjct: 121 LEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEE 180

Query: 198 GSTSTAKRGAKSSKLADQREKTQEEQAIAMATCSEGRRFDITINYGTDVKSGTRIEGNAP 19
           G     K+G+KS+K   + E T E+Q +  A   E  RF +  N  +DV  G + + +  
Sbjct: 181 G--PARKKGSKSAKKIGEPE-TIEQQVVEAALPMEAMRFSVVTNVESDV--GEKEKNSNN 235

Query: 18  ISIGEK 1
           ++ GEK
Sbjct: 236 VTPGEK 241


>ref|XP_006374620.1| hypothetical protein POPTR_0015s13040g [Populus trichocarpa]
           gi|550322613|gb|ERP52417.1| hypothetical protein
           POPTR_0015s13040g [Populus trichocarpa]
          Length = 437

 Score =  200 bits (509), Expect = 4e-49
 Identities = 114/248 (45%), Positives = 157/248 (63%), Gaps = 3/248 (1%)
 Frame = -2

Query: 735 MVLQNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQ 556
           MV Q GIK A  +I  +F  LV KVCDCLL+KG L L E++RYTEL    V+NCLLVLIQ
Sbjct: 1   MVSQYGIKYAVHIITNHFGPLVAKVCDCLLKKGPLPLREIVRYTELSETLVRNCLLVLIQ 60

Query: 555 HNCVLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGL 376
           HNC+  F +++EGG GE +K    Y  LFDN+LHR+RF+KF+A+V++E DK C +L E L
Sbjct: 61  HNCLQPFLLEEEGGFGEVNKVSSLYMVLFDNVLHRVRFSKFMAIVSQEFDKLCVDLIETL 120

Query: 375 VQHGRLSLEQLILRAIPEPNQGNI-ALQDGIRASFVKLVEAHYVERCPDFKPSIPIPPQD 199
           +QHGRLS EQ+        + G + ALQ+ +     KLV A YVERCP  +P + +P ++
Sbjct: 121 LQHGRLSSEQIFDGFRDRSSSGGMEALQENMH----KLVMARYVERCPISEPFLALPSEE 176

Query: 198 GSTSTAKRGAKSSKLADQREKTQEEQAIAMATCSEGRRFDITIN--YGTDVKSGTRIEGN 25
            +    +RGAKS+K A    +T E++ +  A   EG RF   +N   G D     ++E N
Sbjct: 177 EAAPVRRRGAKSAK-AFLEPETLEQRVLVAAVPPEGMRFSFELNPEIGAD---RDKVENN 232

Query: 24  APISIGEK 1
           +  +IG+K
Sbjct: 233 SSSNIGDK 240


>ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protein [Populus trichocarpa]
           gi|550322612|gb|EEF06047.2| RNA polymerase 3 subunit
           RPC82 family protein [Populus trichocarpa]
          Length = 520

 Score =  200 bits (509), Expect = 4e-49
 Identities = 114/248 (45%), Positives = 157/248 (63%), Gaps = 3/248 (1%)
 Frame = -2

Query: 735 MVLQNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQ 556
           MV Q GIK A  +I  +F  LV KVCDCLL+KG L L E++RYTEL    V+NCLLVLIQ
Sbjct: 1   MVSQYGIKYAVHIITNHFGPLVAKVCDCLLKKGPLPLREIVRYTELSETLVRNCLLVLIQ 60

Query: 555 HNCVLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGL 376
           HNC+  F +++EGG GE +K    Y  LFDN+LHR+RF+KF+A+V++E DK C +L E L
Sbjct: 61  HNCLQPFLLEEEGGFGEVNKVSSLYMVLFDNVLHRVRFSKFMAIVSQEFDKLCVDLIETL 120

Query: 375 VQHGRLSLEQLILRAIPEPNQGNI-ALQDGIRASFVKLVEAHYVERCPDFKPSIPIPPQD 199
           +QHGRLS EQ+        + G + ALQ+ +     KLV A YVERCP  +P + +P ++
Sbjct: 121 LQHGRLSSEQIFDGFRDRSSSGGMEALQENMH----KLVMARYVERCPISEPFLALPSEE 176

Query: 198 GSTSTAKRGAKSSKLADQREKTQEEQAIAMATCSEGRRFDITIN--YGTDVKSGTRIEGN 25
            +    +RGAKS+K A    +T E++ +  A   EG RF   +N   G D     ++E N
Sbjct: 177 EAAPVRRRGAKSAK-AFLEPETLEQRVLVAAVPPEGMRFSFELNPEIGAD---RDKVENN 232

Query: 24  APISIGEK 1
           +  +IG+K
Sbjct: 233 SSSNIGDK 240


>gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Morus notabilis]
          Length = 564

 Score =  195 bits (496), Expect = 1e-47
 Identities = 120/251 (47%), Positives = 159/251 (63%), Gaps = 6/251 (2%)
 Frame = -2

Query: 735 MVLQNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQ 556
           M    GIK A  LI ++F +LV  VC+ LLRKG LTL +LIR+TEL   Q+KN LL+LIQ
Sbjct: 1   MATPYGIKFAVHLITSHFGNLVANVCENLLRKGPLTLQQLIRFTELTPLQIKNSLLILIQ 60

Query: 555 HNCVLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGL 376
           HNCV  F+ ++ G  G   K V  Y  LFDNILHR+RF KFL +V+EELDK C E+ EGL
Sbjct: 61  HNCVQPFSSEQIGAGGNEVK-VTQYLVLFDNILHRLRFPKFLEIVSEELDKNCGEILEGL 119

Query: 375 VQHGRLSLEQLILRAIPEPNQGNIALQDGIRASFVKLVEAHYVERCPDFKPSIPIPPQDG 196
           +QHGRL+LEQ+  RA       + A+QD +R SF KL+ + +VERCP      P P  + 
Sbjct: 120 LQHGRLTLEQIYERA------RDNAVQDAVRESFQKLLNSRFVERCP-----APEPFVEP 168

Query: 195 ST--STAKRGAKSSKLADQREKTQEEQAIAMATCSEGRRFDITINYGT----DVKSGTRI 34
           ST  S+ KRGAKS+KL D+  +T+E++ +A A   +  RF I    GT    D K G   
Sbjct: 169 STIKSSNKRGAKSAKL-DEVSETEEQRVLAAAASLDTLRFSILTPSGTEFDEDKKDG--- 224

Query: 33  EGNAPISIGEK 1
           + ++ + +GEK
Sbjct: 225 DSSSSMGVGEK 235


>ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prunus persica]
           gi|462415465|gb|EMJ20202.1| hypothetical protein
           PRUPE_ppa004195mg [Prunus persica]
          Length = 524

 Score =  184 bits (466), Expect = 4e-44
 Identities = 111/243 (45%), Positives = 155/243 (63%), Gaps = 1/243 (0%)
 Frame = -2

Query: 726 QNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQHNC 547
           Q GIK A  +I +NF +LV KVC+ LLR+G L+L +LI +TEL  QQVKN LL+LIQHNC
Sbjct: 5   QYGIKYAVHIITSNFGNLVAKVCEILLRRGHLSLKQLIGFTELTPQQVKNSLLILIQHNC 64

Query: 546 VLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGLVQH 367
           V  F+  +  G       V  Y ALFDNI+HR RF KFLA+V++ELD + + + + L+++
Sbjct: 65  VQPFSFDQSEG-----PKVTQYIALFDNIIHRGRFAKFLAVVSQELDTDRELILKDLLEN 119

Query: 366 GRLSLEQLILRAIPEPNQGNIALQDGIRASFVKLVEAHYVERCPDFKPSI-PIPPQDGST 190
           GRL+L+Q+I  A    +QG+ A +D ++ SF+KLV AH+VERCP  +P +     Q+G  
Sbjct: 120 GRLTLKQIIEGAESSKSQGDSADKDSVQESFLKLVNAHFVERCPAPEPVLGQATKQEGPA 179

Query: 189 STAKRGAKSSKLADQREKTQEEQAIAMATCSEGRRFDITINYGTDVKSGTRIEGNAPISI 10
              KRGAKS+K+ +  E T E++ IA A   E  RF I I+   D   G     +  +S+
Sbjct: 180 K--KRGAKSAKMVEVPE-TIEQRVIAAAAPPEAIRFSIMIDSEADAPGGK----SDNMSV 232

Query: 9   GEK 1
           GEK
Sbjct: 233 GEK 235


>ref|XP_002510780.1| DNA-directed RNA polymerase III 62 kDa polypeptide, putative
           [Ricinus communis] gi|223549895|gb|EEF51382.1|
           DNA-directed RNA polymerase III 62 kDa polypeptide,
           putative [Ricinus communis]
          Length = 485

 Score =  179 bits (454), Expect = 9e-43
 Identities = 97/234 (41%), Positives = 147/234 (62%)
 Frame = -2

Query: 726 QNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQHNC 547
           Q+GIK A+ +I  +F +LV KVC CLLRKG LT+ +++ +TEL   QVKN LLVLIQHNC
Sbjct: 5   QHGIKYATHIITNHFGNLVAKVCQCLLRKGPLTVQKVVEFTELNQTQVKNSLLVLIQHNC 64

Query: 546 VLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGLVQH 367
           V  +        G+  K   HY ALFDNILHR+RF+KFLA+++++  K C ++ EGL++H
Sbjct: 65  VQAYR------SGDDLKLTTHYIALFDNILHRVRFSKFLAIISQDFHKSCVDIVEGLLEH 118

Query: 366 GRLSLEQLILRAIPEPNQGNIALQDGIRASFVKLVEAHYVERCPDFKPSIPIPPQDGSTS 187
           GRL+++Q++ RA    N  N    D ++ +  KLV   Y+E CP  +P +  PP +    
Sbjct: 119 GRLTVKQIVDRA----NSRNSIGLDSVKENLCKLVNGRYIEHCPASEP-VLAPPTEEEDR 173

Query: 186 TAKRGAKSSKLADQREKTQEEQAIAMATCSEGRRFDITINYGTDVKSGTRIEGN 25
             KR AKS+K+  + E T E++ +A+A   + +RF + ++  T++K     + N
Sbjct: 174 AKKRSAKSAKIVIESE-TLEQRVLAVAVPMDAKRFSVDLD--TELKDDAENDQN 224


>ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
           [Fragaria vesca subsp. vesca]
          Length = 534

 Score =  172 bits (437), Expect = 8e-41
 Identities = 104/246 (42%), Positives = 146/246 (59%), Gaps = 2/246 (0%)
 Frame = -2

Query: 732 VLQNGIKLASSLIYANFADLVGKVCDCLLRKGALTLPELIRYTELPSQQVKNCLLVLIQH 553
           V  +GI+ A  +I  +F +LV KVC+ LL+ G L L  LIR T L  QQVKN LL+L+QH
Sbjct: 3   VTNSGIQYAVQIITKHFGNLVAKVCETLLKSGPLNLGALIRSTALTPQQVKNSLLILVQH 62

Query: 552 NCVLDFTVQKEGGIGEHDKWVVHYAALFDNILHRMRFTKFLAMVAEELDKECKELFEGLV 373
           NCV  FT + + G+       V Y A++DNILHR+RF KFLA+VA+EL  ECK+L  GL+
Sbjct: 63  NCVQPFTQESKAGL------KVQYIAVYDNILHRLRFAKFLAVVAQELGDECKQLVAGLL 116

Query: 372 QHGRLSLEQLILRAIPEPNQGNIALQD--GIRASFVKLVEAHYVERCPDFKPSIPIPPQD 199
           +HGRL+ +QL+ RA  +    +  +QD    + +FV+LV A +VERCP  +P +  PP+ 
Sbjct: 117 EHGRLTQQQLMDRADQKSKSDSTEVQDVSAAQENFVRLVNARFVERCPAPEPLLEEPPE- 175

Query: 198 GSTSTAKRGAKSSKLADQREKTQEEQAIAMATCSEGRRFDITINYGTDVKSGTRIEGNAP 19
                 K   KS+K+  Q  +T E++ +A A   E  RF IT    TD          + 
Sbjct: 176 -QEGPKKPRGKSAKMV-QVPETIEQRVLAAARPMEAIRFLITTESETDDPLQKSENNFSS 233

Query: 18  ISIGEK 1
           + +GEK
Sbjct: 234 MGVGEK 239