BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00031900
         (446 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001944766.2| PREDICTED: hypothetical protein LOC100168453...    62   1e-07
gb|AAK00310.1|AF315820_1 DNA-dependent RNA polymerase II largest...    57   3e-06
gb|AAC62246.1| DNA-dependent RNA polymerase II largest subunit, ...    55   8e-06

>ref|XP_001944766.2| PREDICTED: hypothetical protein LOC100168453 [Acyrthosiphon pisum]
          Length = 741

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 51/157 (32%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
 Frame = -2

Query: 439 YDASSH-ALPPTYHTSDTLVYDASAHAVPPLHQTHPPLSYDTSSQAFVTAAP-----HNV 278
           Y +SS+ A  P Y       + + A++ P  +    P   D   Q +VT AP      + 
Sbjct: 462 YSSSSYKAAKPEYSAP---AHKSIAYSTPSSYVAVAPPKCDEHEQEYVTKAPSYDSKQSY 518

Query: 277 APSYAATPVSYDQSSQV--SVPEA-----SGFGPAYWAAVAHESSNQVYDAS----SQAY 131
           AP+ A +P +Y  S Q   S P A     + +GPA   + A   S   Y AS    S +Y
Sbjct: 519 APAPAYSPAAYTSSKQSYSSAPIAVYSPVASYGPAPEYSAAPSYSAPSYSASQSYQSASY 578

Query: 130 VPAVPHSIAPCYAPPPAVSYDPSSQVYVPEASALGPA 20
             A P   +P YAP PA +Y P++Q Y P A +  PA
Sbjct: 579 SAAAPSYPSPSYAPAPAPAYAPAAQSYAPAAPSYAPA 615


>gb|AAK00310.1|AF315820_1 DNA-dependent RNA polymerase II largest subunit RPB1 [Glaucosphaera
            vacuolata]
          Length = 1746

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 12/150 (8%)
 Frame = -2

Query: 433  ASSHALPPTYHTSDTLVYDASAHAVPPLHQTHPPLS--YDTSSQAFVTAAP--HNVAPSY 266
            A+S    PT  T     Y  ++ +  P   ++ P S  Y  +S A+   +P     +P+Y
Sbjct: 1594 AASPGYSPTSPT-----YSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSPTY 1648

Query: 265  AATPVSYDQSSQVSVPEASGFGPAYWAAVAHESSNQVYDASSQAYVPAVPH--SIAPCYA 92
            + T  +Y  +S +  P +    PA    V++  S+  Y  SS  Y P+ PH    +P Y+
Sbjct: 1649 SPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHYSPSSPHYS 1708

Query: 91   P------PPAVSYDPSSQVYVPEASALGPA 20
            P      P +  Y PSS  Y P + A  P+
Sbjct: 1709 PSSPQYSPSSPQYSPSSPAYSPSSPAYSPS 1738


>gb|AAC62246.1| DNA-dependent RNA polymerase II largest subunit, partial [Breviata
            anathema]
          Length = 1690

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
 Frame = -2

Query: 439  YDASSHALPPTY--HTSDTLVYDASAHAVPPLHQTHPPLS--YDTSSQAFVTAAP--HNV 278
            Y  +S A  P    ++  +  Y  ++ A  P    + P S  Y  +S A+  A+P     
Sbjct: 1506 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1565

Query: 277  APSYAATPVSYDQSSQVSVPEASGFGPAYWAAVAHESSNQVYDASSQAYVPAVP--HSIA 104
            +P+Y+    +Y  +S    P +  + PA   + A+  ++  Y  +S AY PA P     +
Sbjct: 1566 SPAYSPASPAYSPASPAYSPASPAYSPA---SPAYSPASPAYSPASPAYSPASPAYSPAS 1622

Query: 103  PCYAP------PPAVSYDPSSQVYVPEASALGPA 20
            P Y+P      P + +Y P+S  Y P + A GPA
Sbjct: 1623 PAYSPASPAYSPASPAYSPASPAYSPASPAYGPA 1656