BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00031386
         (743 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514120.1| conserved hypothetical protein [Ricinus comm...   139   1e-30
gb|EXB38853.1| Chloroplastic group IIA intron splicing facilitat...   127   3e-27
ref|XP_006475470.1| PREDICTED: chloroplastic group IIA intron sp...   124   5e-26
ref|XP_006475466.1| PREDICTED: chloroplastic group IIA intron sp...   124   5e-26
ref|XP_006451488.1| hypothetical protein CICLE_v10007477mg [Citr...   124   5e-26
gb|EYU29891.1| hypothetical protein MIMGU_mgv1a001353mg [Mimulus...   123   8e-26
ref|XP_007203795.1| hypothetical protein PRUPE_ppa001111mg [Prun...   121   2e-25
ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron sp...   120   4e-25
ref|XP_004956664.1| PREDICTED: chloroplastic group IIA intron sp...   120   5e-25
ref|XP_006661163.1| PREDICTED: chloroplastic group IIA intron sp...   119   9e-25
ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp...   119   1e-24
emb|CBI27903.3| unnamed protein product [Vitis vinifera]              118   2e-24
ref|XP_004288953.1| PREDICTED: chloroplastic group IIA intron sp...   117   3e-24
ref|NP_001062990.1| Os09g0363100 [Oryza sativa Japonica Group] g...   117   6e-24
gb|EAY94887.1| hypothetical protein OsI_16687 [Oryza sativa Indi...   117   6e-24
ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron sp...   116   7e-24
tpg|DAA61175.1| TPA: hypothetical protein ZEAMMB73_652631 [Zea m...   116   9e-24
ref|XP_007012816.1| CRS1 / YhbY domain-containing protein, putat...   114   3e-23
ref|XP_007012815.1| CRS1 / YhbY domain-containing protein, putat...   114   3e-23
ref|XP_007012812.1| CRS1 / YhbY domain-containing protein, putat...   114   3e-23

>ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
           gi|223546576|gb|EEF48074.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 930

 Score =  139 bits (349), Expect = 1e-30
 Identities = 93/245 (37%), Positives = 131/245 (53%), Gaps = 36/245 (14%)
 Frame = +3

Query: 117 AAAEEKEVNFDLGNKIS-APWVYKTKPKESHFNSETKIVEKGLADSVK-VTEFDENLETP 290
           ++ ++  V+  L N ++ APWV+ T+PK++HF+S  KI E  + + V  V +  ENLE  
Sbjct: 148 SSIDDDSVSVSLPNHLTTAPWVHGTRPKKNHFSSRPKIGENVVQNDVHTVVDIVENLE-- 205

Query: 291 KRVVNRNDTNSED----------------YASQFG---------LVEEKLNDDFERVSFD 395
           K V   +    ED                Y  +F           VE K +++  R  + 
Sbjct: 206 KEVTCNDKFKKEDNILHVDNAERLVKEVNYDKKFKEAKVQVGGFSVELKRDNEIARAKYS 265

Query: 396 SGKN--------DNVGTSVGVGSRDGDLGAVLPWAISSNKESVNGH-KWKRNKTEVAEKS 548
              +         N G  V V   D      LPW      ESV G+ + KR+ TE+AE+ 
Sbjct: 266 KSPSYINEKPFGANGGYGVQVSYDDNSSSIELPWEKERVMESVEGYLRGKRSNTELAERM 325

Query: 549 IPEVELKRLRNVGLRMQMRIKVGASGVTQALVECIREKWKVDEVVKLKFEGPPALNMQRT 728
           +PE ELKRLRNV LRM  RIKVGA+G+ Q LV+ + EKW++DEVVKLKFE P + NM+RT
Sbjct: 326 LPEHELKRLRNVALRMYERIKVGAAGINQDLVDAVHEKWRLDEVVKLKFEEPLSFNMRRT 385

Query: 729 HDVLE 743
           H++LE
Sbjct: 386 HEILE 390


>gb|EXB38853.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
           notabilis]
          Length = 859

 Score =  127 bits (320), Expect = 3e-27
 Identities = 84/197 (42%), Positives = 109/197 (55%), Gaps = 3/197 (1%)
 Frame = +3

Query: 162 ISAPWVYKTKPKESHFNSETKIVEKGLADSVKVTEFDENLETPKRVVNRNDTNSEDYASQ 341
           +SAPW + TKP + H  SE + +EK      +  EFD         V R++ + E+    
Sbjct: 144 VSAPWAHGTKPFKPHVVSEPETLEKSDNGDFQ-REFD---------VGRDEISEEESEIS 193

Query: 342 FGLVEEKLNDDFERVSFDSGKNDNVGTSVGVGSRDGDLGAVLPWAISSNKESVNGHKW-- 515
             ++     DD E  S D   ND                  LPW  +   ES  G K   
Sbjct: 194 NNVMNGFSLDDVEESS-DYKSND------------------LPWKKAGKAESREGEKAAA 234

Query: 516 -KRNKTEVAEKSIPEVELKRLRNVGLRMQMRIKVGASGVTQALVECIREKWKVDEVVKLK 692
            +R+ T +AEK++PE ELKRLRNV LRM  R KVGA G+TQALV+ I EKWK+DEVVKLK
Sbjct: 235 KRRSNTAMAEKTLPEHELKRLRNVSLRMLERRKVGARGITQALVDSIHEKWKLDEVVKLK 294

Query: 693 FEGPPALNMQRTHDVLE 743
           FE P +LNM+RTH++LE
Sbjct: 295 FEEPLSLNMRRTHEILE 311


>ref|XP_006475470.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X5 [Citrus sinensis]
          Length = 803

 Score =  124 bits (310), Expect = 5e-26
 Identities = 80/203 (39%), Positives = 118/203 (58%), Gaps = 9/203 (4%)
 Frame = +3

Query: 162 ISAPWVYKTKPKESHFNS-ETKIVEK--GLADSVKVTEFDENL---ETPKRVVNRNDTNS 323
           +SAPW++ T  KE  F+S +TKI  K   + D   +  F++ +      ++ V   D   
Sbjct: 124 VSAPWIHGTDSKEIKFDSPQTKITTKKEDIGDDGLLGSFEKTVVHSAVKEKTVIELDKEG 183

Query: 324 EDYASQFGLVEEKLNDDFERVSFDSGKNDNVGT---SVGVGSRDGDLGAVLPWAISSNKE 494
            DY  +    E K+  D   +     ++  VG+       G  + D  +VLPW  ++++ 
Sbjct: 184 -DYNKELKTDEVKI--DANPIELSKDRHREVGSLNQKQIKGYHEVDDPSVLPWKRNTDRR 240

Query: 495 SVNGHKWKRNKTEVAEKSIPEVELKRLRNVGLRMQMRIKVGASGVTQALVECIREKWKVD 674
                  +R+ TE+AEK IPE EL+RLRN+ LRM  R KVG++G+TQALV+ I EKWK+D
Sbjct: 241 -------RRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLD 293

Query: 675 EVVKLKFEGPPALNMQRTHDVLE 743
           EVVKLKFE P +L M+RTH++LE
Sbjct: 294 EVVKLKFEEPHSLQMKRTHEILE 316


>ref|XP_006475466.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X1 [Citrus sinensis]
           gi|568843115|ref|XP_006475467.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X2 [Citrus sinensis]
           gi|568843117|ref|XP_006475468.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X3 [Citrus sinensis]
           gi|568843119|ref|XP_006475469.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X4 [Citrus sinensis]
          Length = 812

 Score =  124 bits (310), Expect = 5e-26
 Identities = 80/203 (39%), Positives = 118/203 (58%), Gaps = 9/203 (4%)
 Frame = +3

Query: 162 ISAPWVYKTKPKESHFNS-ETKIVEK--GLADSVKVTEFDENL---ETPKRVVNRNDTNS 323
           +SAPW++ T  KE  F+S +TKI  K   + D   +  F++ +      ++ V   D   
Sbjct: 124 VSAPWIHGTDSKEIKFDSPQTKITTKKEDIGDDGLLGSFEKTVVHSAVKEKTVIELDKEG 183

Query: 324 EDYASQFGLVEEKLNDDFERVSFDSGKNDNVGT---SVGVGSRDGDLGAVLPWAISSNKE 494
            DY  +    E K+  D   +     ++  VG+       G  + D  +VLPW  ++++ 
Sbjct: 184 -DYNKELKTDEVKI--DANPIELSKDRHREVGSLNQKQIKGYHEVDDPSVLPWKRNTDRR 240

Query: 495 SVNGHKWKRNKTEVAEKSIPEVELKRLRNVGLRMQMRIKVGASGVTQALVECIREKWKVD 674
                  +R+ TE+AEK IPE EL+RLRN+ LRM  R KVG++G+TQALV+ I EKWK+D
Sbjct: 241 -------RRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLD 293

Query: 675 EVVKLKFEGPPALNMQRTHDVLE 743
           EVVKLKFE P +L M+RTH++LE
Sbjct: 294 EVVKLKFEEPHSLQMKRTHEILE 316


>ref|XP_006451488.1| hypothetical protein CICLE_v10007477mg [Citrus clementina]
           gi|557554714|gb|ESR64728.1| hypothetical protein
           CICLE_v10007477mg [Citrus clementina]
          Length = 810

 Score =  124 bits (310), Expect = 5e-26
 Identities = 80/203 (39%), Positives = 118/203 (58%), Gaps = 9/203 (4%)
 Frame = +3

Query: 162 ISAPWVYKTKPKESHFNS-ETKIVEK--GLADSVKVTEFDENL---ETPKRVVNRNDTNS 323
           +SAPW++ T  KE  F+S +TKI  K   + D   +  F++ +      ++ V   D   
Sbjct: 122 VSAPWIHGTDSKEIKFDSPQTKITTKKEDIGDDGLLGSFEKTVVHSAVKEKTVIELDKEG 181

Query: 324 EDYASQFGLVEEKLNDDFERVSFDSGKNDNVGT---SVGVGSRDGDLGAVLPWAISSNKE 494
            DY  +    E K+  D   +     ++  VG+       G  + D  +VLPW  ++++ 
Sbjct: 182 -DYNKELKTDEVKI--DANPIELSKDRHREVGSLNQKQIKGYHEVDDPSVLPWKRNTDRR 238

Query: 495 SVNGHKWKRNKTEVAEKSIPEVELKRLRNVGLRMQMRIKVGASGVTQALVECIREKWKVD 674
                  +R+ TE+AEK IPE EL+RLRN+ LRM  R KVG++G+TQALV+ I EKWK+D
Sbjct: 239 -------RRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLD 291

Query: 675 EVVKLKFEGPPALNMQRTHDVLE 743
           EVVKLKFE P +L M+RTH++LE
Sbjct: 292 EVVKLKFEEPHSLQMKRTHEILE 314


>gb|EYU29891.1| hypothetical protein MIMGU_mgv1a001353mg [Mimulus guttatus]
          Length = 835

 Score =  123 bits (308), Expect = 8e-26
 Identities = 84/222 (37%), Positives = 121/222 (54%), Gaps = 11/222 (4%)
 Frame = +3

Query: 111 SVAAAEEKEVNFDLGNK-----------ISAPWVYKTKPKESHFNSETKIVEKGLADSVK 257
           +V++A+E EV+  +  +           I APWV+  + +      E  + E    +   
Sbjct: 110 NVSSAKEIEVSVSVSERVVVTHVKKPKSILAPWVHGNESRR-----ELPVSEGSTKNQEN 164

Query: 258 VTEFDENLETPKRVVNRNDTNSEDYASQFGLVEEKLNDDFERVSFDSGKNDNVGTSVGVG 437
           V    E L +P RV+     + E +  +F     +L +    V  +S   D   T +   
Sbjct: 165 VRTEKEFLVSPVRVLAEYGKSDEKFI-EFDETPIRLTEK-NAVVENSATTDRTATRIKP- 221

Query: 438 SRDGDLGAVLPWAISSNKESVNGHKWKRNKTEVAEKSIPEVELKRLRNVGLRMQMRIKVG 617
           S +GD    LPW   +++E V   K ++  T +AE  +PE ELKRLRNV LRM  RIKVG
Sbjct: 222 SVNGDGLNRLPWERKNDEEFVKKDKLRKTSTSLAEGLVPEHELKRLRNVSLRMVERIKVG 281

Query: 618 ASGVTQALVECIREKWKVDEVVKLKFEGPPALNMQRTHDVLE 743
           A+GVTQALV+ I +KWK +EVVKLKF GPP+ NM+RTH++LE
Sbjct: 282 AAGVTQALVDSIHDKWKNEEVVKLKFLGPPSKNMKRTHEILE 323


>ref|XP_007203795.1| hypothetical protein PRUPE_ppa001111mg [Prunus persica]
           gi|462399326|gb|EMJ04994.1| hypothetical protein
           PRUPE_ppa001111mg [Prunus persica]
          Length = 906

 Score =  121 bits (304), Expect = 2e-25
 Identities = 95/282 (33%), Positives = 137/282 (48%), Gaps = 36/282 (12%)
 Frame = +3

Query: 6   KFPWQQQKIXXXXXXXXXXXXXXXXXXXXISQSLNSVAAAEEKE------VNFDLGNKIS 167
           KFPWQ+Q                      + +    V   +E+E      V+F L N+I 
Sbjct: 99  KFPWQKQN-------------------ELVQEEKEEVEEEDEEEEPVNQKVSFSLPNRIV 139

Query: 168 -APWVYKTKPKESHFNSETKIVEK---------GLADSVKVTEFDENLETPKRVVNRNDT 317
            APW + +K      +SE +  +          G A   ++      ++  K    R D+
Sbjct: 140 YAPWAHGSKRITPQVDSEPETSQHSGAQGKNLDGFAGHSEIDTTSGAVKNEKSFERRFDS 199

Query: 318 NSE---DYASQFGLV-------EEKLNDDF-------ERVSFDSGKNDNVGTSVGVGSRD 446
           N +   +   + G++       EEK+           E +S D   ++ V   V  GS  
Sbjct: 200 NRKLERERVGEIGIISIGVSKKEEKMISKGLNGISLNETLSGDGENDEKVENFVYSGS-- 257

Query: 447 GDLGAV-LPWAISSNKESVNGHKWK--RNKTEVAEKSIPEVELKRLRNVGLRMQMRIKVG 617
              G++ LPW   S   S  G K +  R+ TE+AE+ +P+ EL+RLRNV LRM  RIKVG
Sbjct: 258 ---GSIRLPWKRESELSSEEGDKTRKRRSNTELAERMLPDHELRRLRNVSLRMLERIKVG 314

Query: 618 ASGVTQALVECIREKWKVDEVVKLKFEGPPALNMQRTHDVLE 743
            +G+TQALV  I EKWK+DEVVKLKFE P +LNM+RTH++LE
Sbjct: 315 VTGITQALVNTIHEKWKIDEVVKLKFEEPFSLNMKRTHEILE 356


>ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565382761|ref|XP_006357700.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 820

 Score =  120 bits (302), Expect = 4e-25
 Identities = 86/246 (34%), Positives = 117/246 (47%)
 Frame = +3

Query: 6   KFPWQQQKIXXXXXXXXXXXXXXXXXXXXISQSLNSVAAAEEKEVNFDLGNKISAPWVYK 185
           KFPWQ+                       +++S++S       +VN        APWV+ 
Sbjct: 89  KFPWQEGNSVSVEEVVERQVQFSELENPVVNESVSS---GSRVKVNL-------APWVHG 138

Query: 186 TKPKESHFNSETKIVEKGLADSVKVTEFDENLETPKRVVNRNDTNSEDYASQFGLVEEKL 365
            +PK S    E+  V K L +   +    E     K+V       + D A     +    
Sbjct: 139 KQPKISQVG-ESSTVGKSLENCEDIGSIREQKSLNKQV-------NFDCAP----LRSPQ 186

Query: 366 NDDFERVSFDSGKNDNVGTSVGVGSRDGDLGAVLPWAISSNKESVNGHKWKRNKTEVAEK 545
             DFE+   D          V  G  +      LPW          G K +++  E+AEK
Sbjct: 187 QQDFEK---DIKLESKAEARVDKGITNAKDSVRLPW---------EGDKLRKSNAELAEK 234

Query: 546 SIPEVELKRLRNVGLRMQMRIKVGASGVTQALVECIREKWKVDEVVKLKFEGPPALNMQR 725
            IPE +LKRLRN  LRM  RIKVG+ GVTQ LV+ I++KWKVDE+VKL+FEGPP+ NM+R
Sbjct: 235 LIPEAQLKRLRNAALRMVERIKVGSGGVTQELVDSIQDKWKVDEIVKLRFEGPPSHNMKR 294

Query: 726 THDVLE 743
           THD+LE
Sbjct: 295 THDILE 300


>ref|XP_004956664.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Setaria italica]
          Length = 963

 Score =  120 bits (301), Expect = 5e-25
 Identities = 90/236 (38%), Positives = 128/236 (54%), Gaps = 38/236 (16%)
 Frame = +3

Query: 150 LGNK-ISAPWVYKTKPKESHF-NSETKIVEKGL-ADSVKVTEF------DENLETPKRVV 302
           LGNK +SAPW++  +     + +S     E+G+  D +   E       DE L++ + ++
Sbjct: 185 LGNKPVSAPWMHGEESSNDQWVSSSVAEGEEGVDMDDISDDELGLAEGDDEELDSAEDLL 244

Query: 303 NRNDTNS--EDYASQFG--------LVEEKLN-DDFERVSFDSGKNDNVGT--------- 422
           N +      EDYA Q          +V+   N   F+R    S  N  V T         
Sbjct: 245 NGSSEEELYEDYAVQIANSSYGVDLVVDRGSNVGGFDRSMRRSSVNSIVKTLRSSMEESS 304

Query: 423 -SVGVGSRDGD-----LGAVL-PWAISSNKESV--NGHKWKRNKTEVAEKSIPEVELKRL 575
            +V +   + +     LG VL PW      + V   G   +R+ TE+AE++IPE EL+RL
Sbjct: 305 PNVTIERSNAEDFVQKLGPVLLPWEREEEDDEVFGGGKAGRRSNTELAERTIPENELRRL 364

Query: 576 RNVGLRMQMRIKVGASGVTQALVECIREKWKVDEVVKLKFEGPPALNMQRTHDVLE 743
           R+  LRM+ RIKVG+ GVTQ +VE I  KWKVDEVVK++FEGPP+LNM+RTHD+LE
Sbjct: 365 RDAALRMKERIKVGSGGVTQDIVESIHRKWKVDEVVKMRFEGPPSLNMKRTHDLLE 420


>ref|XP_006661163.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Oryza brachyantha]
          Length = 758

 Score =  119 bits (299), Expect = 9e-25
 Identities = 60/101 (59%), Positives = 79/101 (78%), Gaps = 3/101 (2%)
 Frame = +3

Query: 450 DLGAVL-PWAISSNKESVNG--HKWKRNKTEVAEKSIPEVELKRLRNVGLRMQMRIKVGA 620
           +LG VL PW    +KE+ +G     KR+ TE+AE++IPE EL+RLR+V LRM+ R++VG 
Sbjct: 122 ELGPVLLPWEREEDKEASSGVDRPRKRSNTELAERTIPEPELRRLRDVALRMKERMRVGP 181

Query: 621 SGVTQALVECIREKWKVDEVVKLKFEGPPALNMQRTHDVLE 743
            GVTQ LVE I +KW+VDEV KL+FEGPP+LNM+RTHD+LE
Sbjct: 182 GGVTQVLVESIHQKWRVDEVAKLRFEGPPSLNMKRTHDILE 222


>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Vitis vinifera]
          Length = 884

 Score =  119 bits (297), Expect = 1e-24
 Identities = 83/271 (30%), Positives = 127/271 (46%), Gaps = 25/271 (9%)
 Frame = +3

Query: 6   KFPWQQQKIXXXXXXXXXXXXXXXXXXXXISQSLNSVAAAEEKEVNFDLGNKISA----- 170
           KFPWQ+Q                       +Q+ + V   + + ++  +G+ +S+     
Sbjct: 82  KFPWQEQAEE--------------------TQNSSGVVVPDSEVIDSSVGSPVSSASESR 121

Query: 171 ----PWVYKTKPKESHFNSETKIVEKGLADSVKVTEFDENL----ETPKRVVNRNDTNSE 326
               P ++++KP+     SE +I +      V V  F  +     E  K      D++ +
Sbjct: 122 FVSVPCIHESKPRNPRLVSEPEISQNSCEQGVNVVGFGSHRASVDEWSKSFQKEVDSDGK 181

Query: 327 DYASQFGLVEEKLND-DFERVSFDSGKNDNVGTSVGVGSRDGDLGAV-----------LP 470
                  + E  +     E+   + G + NV  +      D D G             LP
Sbjct: 182 FEGEGVEVDEIPIGVLGTEKTEIEMG-DANVSLNEKPPGGDEDFGNFEGFSGNSSLIELP 240

Query: 471 WAISSNKESVNGHKWKRNKTEVAEKSIPEVELKRLRNVGLRMQMRIKVGASGVTQALVEC 650
           W      + V    W R  T +AE+ +PE EL+RL+N+ LRM  RIKVGA+GVTQ+LV+ 
Sbjct: 241 WKRREGLQPVERDGWGRRNTRMAERMVPEHELRRLKNIALRMLERIKVGAAGVTQSLVDA 300

Query: 651 IREKWKVDEVVKLKFEGPPALNMQRTHDVLE 743
           I EKW+ DEVVKLKFEGP + NM+RTH++LE
Sbjct: 301 IHEKWRKDEVVKLKFEGPSSCNMKRTHEILE 331


>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
          Length = 881

 Score =  118 bits (295), Expect = 2e-24
 Identities = 79/255 (30%), Positives = 119/255 (46%), Gaps = 9/255 (3%)
 Frame = +3

Query: 6   KFPWQQQKIXXXXXXXXXXXXXXXXXXXXISQSLNSVAAAEEKEVNFDLGNKISA----- 170
           KFPWQ+Q                       +Q+ + V   + + ++  +G+ +S+     
Sbjct: 124 KFPWQEQAEE--------------------TQNSSGVVVPDSEVIDSSVGSPVSSASESR 163

Query: 171 ----PWVYKTKPKESHFNSETKIVEKGLADSVKVTEFDENLETPKRVVNRNDTNSEDYAS 338
               P ++++KP+     SE +I +      V V          K  +   D N      
Sbjct: 164 FVSVPCIHESKPRNPRLVSEPEISQNSCEQGVNV----------KTEIEMGDANVS---- 209

Query: 339 QFGLVEEKLNDDFERVSFDSGKNDNVGTSVGVGSRDGDLGAVLPWAISSNKESVNGHKWK 518
                   LN+         G +++ G   G       +   LPW      + V    W 
Sbjct: 210 --------LNEK------PPGGDEDFGNFEGFSGNSSLIE--LPWKRREGLQPVERDGWG 253

Query: 519 RNKTEVAEKSIPEVELKRLRNVGLRMQMRIKVGASGVTQALVECIREKWKVDEVVKLKFE 698
           R  T +AE+ +PE EL+RL+N+ LRM  RIKVGA+GVTQ+LV+ I EKW+ DEVVKLKFE
Sbjct: 254 RRNTRMAERMVPEHELRRLKNIALRMLERIKVGAAGVTQSLVDAIHEKWRKDEVVKLKFE 313

Query: 699 GPPALNMQRTHDVLE 743
           GP + NM+RTH++LE
Sbjct: 314 GPSSCNMKRTHEILE 328


>ref|XP_004288953.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 933

 Score =  117 bits (294), Expect = 3e-24
 Identities = 68/124 (54%), Positives = 83/124 (66%), Gaps = 2/124 (1%)
 Frame = +3

Query: 378 ERVSFDSGKNDNVGTSVGVGSRDGDLGAVLPWAISSNKESVNGHKWKR--NKTEVAEKSI 551
           E VS DS  ++NV T V  GS D    A LPW       +  G K ++  + T  AE S+
Sbjct: 280 ETVSGDSENDENVVTFVSSGS-DSRASARLPWEREGELVNEEGGKTRKKWSNTLSAETSL 338

Query: 552 PEVELKRLRNVGLRMQMRIKVGASGVTQALVECIREKWKVDEVVKLKFEGPPALNMQRTH 731
           P+ ELKRLRNV LRM  R KVGA+G+TQ+LV+ I EKWKVDEVVKLKFE P +LNM+RTH
Sbjct: 339 PDHELKRLRNVSLRMLERTKVGAAGITQSLVDAIHEKWKVDEVVKLKFEEPLSLNMRRTH 398

Query: 732 DVLE 743
            +LE
Sbjct: 399 GILE 402


>ref|NP_001062990.1| Os09g0363100 [Oryza sativa Japonica Group]
           gi|48716728|dbj|BAD23409.1| putative CRS1 [Oryza sativa
           Japonica Group] gi|50726191|dbj|BAD33710.1| putative
           CRS1 [Oryza sativa Japonica Group]
           gi|113631223|dbj|BAF24904.1| Os09g0363100 [Oryza sativa
           Japonica Group] gi|125591023|gb|EAZ31373.1| hypothetical
           protein OsJ_15500 [Oryza sativa Japonica Group]
          Length = 947

 Score =  117 bits (292), Expect = 6e-24
 Identities = 88/240 (36%), Positives = 131/240 (54%), Gaps = 37/240 (15%)
 Frame = +3

Query: 135 EVNFDLGNK-ISAPWVY-KTKPKESHFNSETKIV--------EKGLADSVKVTEFDENLE 284
           E +F LG++ +SAPW++ + +P  +   S+ + +        E GL D     + DE+L 
Sbjct: 172 EPSFLLGSRPVSAPWMHGEEEPMTNQLVSDEEGLDGDGASEDEMGLVDGDG--DEDEDLG 229

Query: 285 TPKRVVNRNDTN--SEDYASQFGLVEEKLNDDFERVSFDSG---------KNDNVGT--- 422
           + +  ++ +     SEDYA+        ++   + VS   G          N  V T   
Sbjct: 230 SEEETLSESSDGEFSEDYAAPAANSSSMMDSVLDHVSSGGGFYRGTRRSSVNSIVNTMRN 289

Query: 423 SVGVGSRDG------------DLGAVL-PWAISSNKESVNGHKWKRNKTEVAEKSIPEVE 563
           S+   SR+              LG VL PW     +E       KR+ TE+AE++IPE E
Sbjct: 290 SMEESSRNAAIECPETEDFVQKLGPVLLPW----EREGDVDRPRKRSNTELAERTIPEHE 345

Query: 564 LKRLRNVGLRMQMRIKVGASGVTQALVECIREKWKVDEVVKLKFEGPPALNMQRTHDVLE 743
           L+RLR+V LRM+ R++VG  GVTQ +VE I +KW+V+EVVKL+FEGPP+LNM+RTHD+LE
Sbjct: 346 LRRLRDVALRMKERMRVGPGGVTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKRTHDILE 405


>gb|EAY94887.1| hypothetical protein OsI_16687 [Oryza sativa Indica Group]
          Length = 893

 Score =  117 bits (292), Expect = 6e-24
 Identities = 88/240 (36%), Positives = 131/240 (54%), Gaps = 37/240 (15%)
 Frame = +3

Query: 135 EVNFDLGNK-ISAPWVY-KTKPKESHFNSETKIV--------EKGLADSVKVTEFDENLE 284
           E +F LG++ +SAPW++ + +P  +   S+ + +        E GL D     + DE+L 
Sbjct: 171 EPSFLLGSRPVSAPWMHGEEEPMTNQLVSDEEGLDGDGASEDEMGLVDGDG--DEDEDLG 228

Query: 285 TPKRVVNRNDTN--SEDYASQFGLVEEKLNDDFERVSFDSG---------KNDNVGT--- 422
           + +  ++ +     SEDYA+        ++   + VS   G          N  V T   
Sbjct: 229 SEEETLSESSDGEFSEDYAAPAANSSSMMDSVLDHVSSGGGFYRGTRRSSVNSIVNTMRN 288

Query: 423 SVGVGSRDG------------DLGAVL-PWAISSNKESVNGHKWKRNKTEVAEKSIPEVE 563
           S+   SR+              LG VL PW     +E       KR+ TE+AE++IPE E
Sbjct: 289 SMEESSRNAAIECPETEDFVQKLGPVLLPW----EREGDVDRPRKRSNTELAERTIPEHE 344

Query: 564 LKRLRNVGLRMQMRIKVGASGVTQALVECIREKWKVDEVVKLKFEGPPALNMQRTHDVLE 743
           L+RLR+V LRM+ R++VG  GVTQ +VE I +KW+V+EVVKL+FEGPP+LNM+RTHD+LE
Sbjct: 345 LRRLRDVALRMKERMRVGPGGVTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKRTHDILE 404


>ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Solanum lycopersicum]
          Length = 812

 Score =  116 bits (291), Expect = 7e-24
 Identities = 80/246 (32%), Positives = 116/246 (47%)
 Frame = +3

Query: 6   KFPWQQQKIXXXXXXXXXXXXXXXXXXXXISQSLNSVAAAEEKEVNFDLGNKISAPWVYK 185
           KFPWQ+                       ++   +SV++    +VN        APWV+ 
Sbjct: 89  KFPWQEGNSVSVEEVVEAQVQISKLENPVVN---DSVSSGSRVKVNL-------APWVHG 138

Query: 186 TKPKESHFNSETKIVEKGLADSVKVTEFDENLETPKRVVNRNDTNSEDYASQFGLVEEKL 365
            +PK S     + +              D++LE  + + +  +  S         + +++
Sbjct: 139 KQPKISQLGESSSL--------------DKSLENCEDIGSSREQKS---------LNKQV 175

Query: 366 NDDFERVSFDSGKNDNVGTSVGVGSRDGDLGAVLPWAISSNKESVNGHKWKRNKTEVAEK 545
           N D      D      V   V  G    +    LPW          G K +++  E+AEK
Sbjct: 176 NVDGTDFEKDIKLESKVEAHVDKGITYANESVRLPW---------EGDKLRKSNAELAEK 226

Query: 546 SIPEVELKRLRNVGLRMQMRIKVGASGVTQALVECIREKWKVDEVVKLKFEGPPALNMQR 725
            IPE +LKRLRN  LRM  RIKVG+ GVTQ LV+ I++KWKVDE+VKL+FEG P+ NM+R
Sbjct: 227 LIPEAQLKRLRNAALRMVERIKVGSGGVTQELVDSIQKKWKVDEIVKLRFEGAPSHNMKR 286

Query: 726 THDVLE 743
           THD+LE
Sbjct: 287 THDILE 292


>tpg|DAA61175.1| TPA: hypothetical protein ZEAMMB73_652631 [Zea mays]
          Length = 964

 Score =  116 bits (290), Expect = 9e-24
 Identities = 57/97 (58%), Positives = 72/97 (74%), Gaps = 2/97 (2%)
 Frame = +3

Query: 459 AVLPWAISSNKESV--NGHKWKRNKTEVAEKSIPEVELKRLRNVGLRMQMRIKVGASGVT 632
           A+LPW      +     G   +R+ TE+AE+SIPE EL+RLR+  LRM+ RIKVG  GVT
Sbjct: 325 ALLPWEREEEDDEAFSGGRAVRRSNTELAERSIPEPELRRLRDTALRMKERIKVGPGGVT 384

Query: 633 QALVECIREKWKVDEVVKLKFEGPPALNMQRTHDVLE 743
           Q +VE I  KWKVDEVVK++FEGPP+LNM+RTHD+LE
Sbjct: 385 QDIVESIHRKWKVDEVVKMRFEGPPSLNMKRTHDLLE 421


>ref|XP_007012816.1| CRS1 / YhbY domain-containing protein, putative isoform 5
           [Theobroma cacao] gi|590575903|ref|XP_007012817.1| CRS1
           / YhbY domain-containing protein, putative isoform 5
           [Theobroma cacao] gi|508783179|gb|EOY30435.1| CRS1 /
           YhbY domain-containing protein, putative isoform 5
           [Theobroma cacao] gi|508783180|gb|EOY30436.1| CRS1 /
           YhbY domain-containing protein, putative isoform 5
           [Theobroma cacao]
          Length = 822

 Score =  114 bits (286), Expect = 3e-23
 Identities = 80/204 (39%), Positives = 114/204 (55%), Gaps = 10/204 (4%)
 Frame = +3

Query: 162 ISAPWVYKTKPKESHF-------NSETKIVEKGLADSVKVTEFDENLETPKRVVNRNDTN 320
           ISAPW + ++  E HF       N E+KI +   ++  K  EF    +    VV      
Sbjct: 136 ISAPWSHGSEFNEPHFDFVPEISNFESKIEDSFASE--KTIEFPGGNKA--EVVGGLIDK 191

Query: 321 SEDYASQFGLVEEKLNDDF-ERVSFDSGKNDNVGT--SVGVGSRDGDLGAVLPWAISSNK 491
           SE    +  + ++K+     + V+   G ND V +  +  V + D + G+V         
Sbjct: 192 SESLNEEVNINKQKIGLPVGKEVAAVEGLNDVVSSRENFEVSNSDDEGGSV--------- 242

Query: 492 ESVNGHKWKRNKTEVAEKSIPEVELKRLRNVGLRMQMRIKVGASGVTQALVECIREKWKV 671
           E  +G   KR+ TE+ ++ IPE E +RLRNV LRM  R KVG +G+TQALVE I E+WK+
Sbjct: 243 EGDSGRSKKRSNTEMVDRMIPEHESQRLRNVALRMVERTKVGVAGITQALVEYIHERWKM 302

Query: 672 DEVVKLKFEGPPALNMQRTHDVLE 743
           DEVVKLKFE P +LNM+RTH++LE
Sbjct: 303 DEVVKLKFEEPLSLNMKRTHEILE 326


>ref|XP_007012815.1| CRS1 / YhbY domain-containing protein, putative isoform 4
           [Theobroma cacao] gi|508783178|gb|EOY30434.1| CRS1 /
           YhbY domain-containing protein, putative isoform 4
           [Theobroma cacao]
          Length = 818

 Score =  114 bits (286), Expect = 3e-23
 Identities = 80/204 (39%), Positives = 114/204 (55%), Gaps = 10/204 (4%)
 Frame = +3

Query: 162 ISAPWVYKTKPKESHF-------NSETKIVEKGLADSVKVTEFDENLETPKRVVNRNDTN 320
           ISAPW + ++  E HF       N E+KI +   ++  K  EF    +    VV      
Sbjct: 136 ISAPWSHGSEFNEPHFDFVPEISNFESKIEDSFASE--KTIEFPGGNKA--EVVGGLIDK 191

Query: 321 SEDYASQFGLVEEKLNDDF-ERVSFDSGKNDNVGT--SVGVGSRDGDLGAVLPWAISSNK 491
           SE    +  + ++K+     + V+   G ND V +  +  V + D + G+V         
Sbjct: 192 SESLNEEVNINKQKIGLPVGKEVAAVEGLNDVVSSRENFEVSNSDDEGGSV--------- 242

Query: 492 ESVNGHKWKRNKTEVAEKSIPEVELKRLRNVGLRMQMRIKVGASGVTQALVECIREKWKV 671
           E  +G   KR+ TE+ ++ IPE E +RLRNV LRM  R KVG +G+TQALVE I E+WK+
Sbjct: 243 EGDSGRSKKRSNTEMVDRMIPEHESQRLRNVALRMVERTKVGVAGITQALVEYIHERWKM 302

Query: 672 DEVVKLKFEGPPALNMQRTHDVLE 743
           DEVVKLKFE P +LNM+RTH++LE
Sbjct: 303 DEVVKLKFEEPLSLNMKRTHEILE 326


>ref|XP_007012812.1| CRS1 / YhbY domain-containing protein, putative isoform 1
           [Theobroma cacao] gi|590575888|ref|XP_007012813.1| CRS1
           / YhbY domain-containing protein, putative isoform 1
           [Theobroma cacao] gi|590575892|ref|XP_007012814.1| CRS1
           / YhbY domain-containing protein, putative isoform 1
           [Theobroma cacao] gi|508783175|gb|EOY30431.1| CRS1 /
           YhbY domain-containing protein, putative isoform 1
           [Theobroma cacao] gi|508783176|gb|EOY30432.1| CRS1 /
           YhbY domain-containing protein, putative isoform 1
           [Theobroma cacao] gi|508783177|gb|EOY30433.1| CRS1 /
           YhbY domain-containing protein, putative isoform 1
           [Theobroma cacao]
          Length = 873

 Score =  114 bits (286), Expect = 3e-23
 Identities = 80/204 (39%), Positives = 114/204 (55%), Gaps = 10/204 (4%)
 Frame = +3

Query: 162 ISAPWVYKTKPKESHF-------NSETKIVEKGLADSVKVTEFDENLETPKRVVNRNDTN 320
           ISAPW + ++  E HF       N E+KI +   ++  K  EF    +    VV      
Sbjct: 136 ISAPWSHGSEFNEPHFDFVPEISNFESKIEDSFASE--KTIEFPGGNKA--EVVGGLIDK 191

Query: 321 SEDYASQFGLVEEKLNDDF-ERVSFDSGKNDNVGT--SVGVGSRDGDLGAVLPWAISSNK 491
           SE    +  + ++K+     + V+   G ND V +  +  V + D + G+V         
Sbjct: 192 SESLNEEVNINKQKIGLPVGKEVAAVEGLNDVVSSRENFEVSNSDDEGGSV--------- 242

Query: 492 ESVNGHKWKRNKTEVAEKSIPEVELKRLRNVGLRMQMRIKVGASGVTQALVECIREKWKV 671
           E  +G   KR+ TE+ ++ IPE E +RLRNV LRM  R KVG +G+TQALVE I E+WK+
Sbjct: 243 EGDSGRSKKRSNTEMVDRMIPEHESQRLRNVALRMVERTKVGVAGITQALVEYIHERWKM 302

Query: 672 DEVVKLKFEGPPALNMQRTHDVLE 743
           DEVVKLKFE P +LNM+RTH++LE
Sbjct: 303 DEVVKLKFEEPLSLNMKRTHEILE 326