BLASTX nr result
ID: Papaver25_contig00031275
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver25_contig00031275 (1072 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_005090450.1| ribosomal protein S4 (mitochondrion) [Millet... 95 5e-25 ref|YP_005090486.1| ribosomal protein S4 (mitochondrion) [Lotus ... 94 2e-24 dbj|BAD83538.2| ribosomal protein S4, partial (mitochondrion) [N... 90 3e-24 ref|YP_003587372.1| ribosomal protein S4 [Cucurbita pepo] gi|259... 86 3e-23 ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus] gi|... 86 1e-21 ref|YP_002000578.1| ribosomal protein S4 [Oryza sativa Japonica ... 83 1e-21 gb|AHA47128.1| ribosomal protein S4 (mitochondrion) [Amborella t... 86 3e-21 gb|AHC94278.1| ribosomal protein S4, partial (mitochondrion) [Am... 86 3e-21 ref|YP_173472.1| ribosomal protein S4 [Nicotiana tabacum] 79 1e-19 ref|YP_717175.1| ribosomal protein S4 [Brassica napus] gi|375911... 80 1e-19 gb|ACH78250.1| ribosomal protein S4 [Arabidopsis thaliana] 80 1e-19 ref|XP_004253314.1| PREDICTED: ribosomal protein S4, mitochondri... 77 3e-19 ref|YP_005090421.1| rps4 gene product (mitochondrion) [Boea hygr... 73 6e-18 ref|YP_008802509.1| ribosomal protein S4 (mitochondrion) [Asclep... 97 1e-17 ref|NP_064046.2| rps4 gene product (mitochondrion) [Beta vulgari... 70 4e-17 ref|YP_002608192.1| ribosomal protein S4 [Carica papaya] gi|1705... 77 8e-17 gb|AAW47271.1| ribosomal protein S4 [Eichhornia crassipes] 74 1e-16 gb|AEK66732.1| ribosomal protein S4 [Ferrocalamus rimosivaginus]... 74 2e-16 gb|AGI48778.1| ribosomal protein S4 (mitochondrion) [Lolium pere... 77 2e-16 ref|YP_514660.1| ribosomal protein S4 [Oryza sativa Indica Group... 75 3e-16 >ref|YP_005090450.1| ribosomal protein S4 (mitochondrion) [Millettia pinnata] gi|372450274|ref|YP_005090457.1| ribosomal protein S4 (mitochondrion) [Millettia pinnata] gi|357197313|gb|AET62910.1| ribosomal protein S4 (mitochondrion) [Millettia pinnata] gi|357197320|gb|AET62917.1| ribosomal protein S4 (mitochondrion) [Millettia pinnata] Length = 358 Score = 95.1 bits (235), Expect(2) = 5e-25 Identities = 66/175 (37%), Positives = 89/175 (50%), Gaps = 36/175 (20%) Frame = -3 Query: 785 LHRRERTTSEFF*FLLDLETRLGVLLVCTHFC---PPARQLISHRRVCVKTVRRSVQKF- 618 +HR TS + FLL+LETRL V+LV HFC P ARQLISHRRVCV S+ + Sbjct: 82 MHRGTERTS-YIPFLLNLETRLDVILVRLHFCETIPQARQLISHRRVCVNNRMVSITRLK 140 Query: 617 ---GDLFSAPYSKLWLKS----------------------------RISPSEWLHLLKTK 531 GDL S + ++ R + +EW HLLKTK Sbjct: 141 VSHGDLISFQENDARIRGEEIRRAFYIEILVDKIIGKFLDHPVRMWRRTKTEWFHLLKTK 200 Query: 530 AGSHILMKSDFFERFAFYYARSRHRKI*EDWQCSK-CLGSHFAEHNKMKSHLYNF 369 G +L+KS F ++ Y + + + + + K CLGS FAEHN+MK +LY+F Sbjct: 201 RGCRLLLKSRFLQKQLRYSMQKEYLERTKKFGSEKVCLGSSFAEHNRMKRNLYHF 255 Score = 47.4 bits (111), Expect(2) = 5e-25 Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVV--ANQNTHIQLATCRKLSLF 788 +FK+C LL GNVW++EL+I+ R + N N++IQL T RKLSLF Sbjct: 14 RFKTCRLLSGNVWNRELTIIQRRILRRLRNKKRSIKRKISPRKNMNSYIQLQTTRKLSLF 73 Query: 787 Y 785 Y Sbjct: 74 Y 74 >ref|YP_005090486.1| ribosomal protein S4 (mitochondrion) [Lotus japonicus] gi|357197350|gb|AET62946.1| ribosomal protein S4 (mitochondrion) [Lotus japonicus] Length = 358 Score = 93.6 bits (231), Expect(2) = 2e-24 Identities = 68/181 (37%), Positives = 90/181 (49%), Gaps = 42/181 (23%) Frame = -3 Query: 785 LHRRERTTSEFF*FLLDLETRLGVLLVCTHFC---PPARQLISHRRVCVKTVRRSVQKF- 618 +HR TS + FLL+LETRL V+LV HFC P ARQLISHRRVCV S+ + Sbjct: 82 MHRGTERTS-YIPFLLNLETRLDVILVRLHFCETIPQARQLISHRRVCVNNRMVSITRLK 140 Query: 617 ---GDLFSAPYSKLWLKS----------------------------RISPSEWLHLLKTK 531 GDL S + ++ R + +EW HLLKTK Sbjct: 141 VSHGDLISFQENDARIRGEEIRRSFYIEILVEKIIGKFLDHPVRMWRRTKTEWFHLLKTK 200 Query: 530 AGSHILMKSDFFERFAFYYARSRHRKI*EDWQCSK-------CLGSHFAEHNKMKSHLYN 372 G +L+KS F ++ Y + ED++ +K CLGS FAEHN+MK +LY+ Sbjct: 201 RGCRLLLKSRFLQQQLRYSMQE------EDFERTKKFGSEKVCLGSSFAEHNRMKRNLYH 254 Query: 371 F 369 F Sbjct: 255 F 255 Score = 47.0 bits (110), Expect(2) = 2e-24 Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVV--ANQNTHIQLATCRKLSLF 788 +FK+C LL GNVW++EL+I+ R + N N++IQL T RKLSLF Sbjct: 14 RFKTCRLLSGNVWNRELTIIQRRILRRLRKKKRSIKRKIYPRENLNSYIQLQTTRKLSLF 73 Query: 787 Y 785 Y Sbjct: 74 Y 74 >dbj|BAD83538.2| ribosomal protein S4, partial (mitochondrion) [Nicotiana tabacum] Length = 349 Score = 89.7 bits (221), Expect(2) = 3e-24 Identities = 64/172 (37%), Positives = 86/172 (50%), Gaps = 33/172 (19%) Frame = -3 Query: 785 LHR-RERTTSEFF*FLLDLETRLGVLLVCTHFC---PPARQLISHRRVCVKTVRRSVQKF 618 +HR RERT+ + FLL+LETRL V+LV HFC P ARQLISHRRVCV ++ F Sbjct: 77 MHRGRERTS--YIPFLLNLETRLDVILVRLHFCETIPQARQLISHRRVCVNNGMVNITHF 134 Query: 617 ----GDLFSAPYSKLWLKS-------------------------RISPSEWLHLLKTKAG 525 GD+ S + + + R + +EW LLKTK G Sbjct: 135 KLSHGDIISFQENDVRTRGEEIKRSFYIEILVEKIIGKFLDHPWRRTKTEWFRLLKTKRG 194 Query: 524 SHILMKSDFFERFAFYYARSRHRKI*EDWQCSKCLGSHFAEHNKMKSHLYNF 369 +L+KS F ++ + + CLGS FAEHN+MK +LY+F Sbjct: 195 CRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHF 246 Score = 50.1 bits (118), Expect(2) = 3e-24 Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 2/61 (3%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVVA--NQNTHIQLATCRKLSLF 788 +FK+C LLLGNVW++EL+I+ R + + N N++IQL T RKLSLF Sbjct: 9 RFKTCRLLLGNVWNRELTIIQRRILRRLRNKKRSIKRKIYSRENLNSYIQLQTTRKLSLF 68 Query: 787 Y 785 Y Sbjct: 69 Y 69 >ref|YP_003587372.1| ribosomal protein S4 [Cucurbita pepo] gi|259156835|gb|ACV96696.1| ribosomal protein S4 [Cucurbita pepo] Length = 356 Score = 86.3 bits (212), Expect(2) = 3e-23 Identities = 67/179 (37%), Positives = 90/179 (50%), Gaps = 40/179 (22%) Frame = -3 Query: 785 LHR-RERTTSEFF*FLLDLETRLGVLLVCTHFC---PPARQLISHRRVCV---------- 648 +HR RERT + FLL+LETRL V+LV HF P ARQLISHRRVCV Sbjct: 80 MHRGRERTN--YIPFLLNLETRLDVILVRLHFSSTLPQARQLISHRRVCVNKGMVPITHF 137 Query: 647 -------------------KTVRRS------VQKFGDLFSAPYSKLWLKSRISPSEWLHL 543 + +RRS V+K F ++W +++ +EW HL Sbjct: 138 KVSHGDLISLKENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTK---TEWFHL 194 Query: 542 LKTKAGSHILMKSDFFERFAFYYARSRHRKI*EDWQCSK-CLGSHFAEHNKMKSHLYNF 369 LKTK G +L+KS F ++ S + + + K CLG FAEHN+MK +LY+F Sbjct: 195 LKTKRGCRLLLKSRFLQQLRSSMQESDLERRKKLFGSDKVCLGCSFAEHNRMKRNLYHF 253 Score = 50.1 bits (118), Expect(2) = 3e-23 Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 2/61 (3%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVVA--NQNTHIQLATCRKLSLF 788 +FK+C LLLGNVW++EL+I+ R + + N N++IQL T RKLSLF Sbjct: 12 RFKTCRLLLGNVWNRELTIIQRRILRKLRNKRRSIKRKIYSRENLNSYIQLQTTRKLSLF 71 Query: 787 Y 785 Y Sbjct: 72 Y 72 >ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus] gi|259156791|gb|ACV96653.1| ribosomal protein S4 [Citrullus lanatus] Length = 355 Score = 86.3 bits (212), Expect(2) = 1e-21 Identities = 68/180 (37%), Positives = 89/180 (49%), Gaps = 42/180 (23%) Frame = -3 Query: 785 LHRRERTTSEFF*FLLDLETRLGVLLVCTHFC---PPARQLISHRRVCVKTVRRSVQKF- 618 +HR TS + FLL+LETRL V+LV HF P ARQLISHRRVCV S+ F Sbjct: 80 MHRGTERTS-YIPFLLNLETRLDVILVRLHFSETIPQARQLISHRRVCVNKGMVSITHFK 138 Query: 617 ---GDLFSAPYSKLWLKS----------------------------RISPSEWLHLLKTK 531 GDL S + ++ R + +EW HLLKTK Sbjct: 139 VSHGDLISFQENDARIRGEEIRRFFYIEILVEKIIGKFLDHPVRMWRRTKTEWFHLLKTK 198 Query: 530 AGSHILMKSDFFERFAFYYARSRHRKI*EDWQCSK-------CLGSHFAEHNKMKSHLYN 372 G +L+KS F ++ RS ++ ED + +K CLGS FAEHN+MK +LY+ Sbjct: 199 RGCRLLLKSRFLQQL-----RSSMQE--EDLERTKKFGLEKVCLGSSFAEHNRMKRNLYH 251 Score = 45.1 bits (105), Expect(2) = 1e-21 Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVVA--NQNTHIQLATCRKLSLF 788 +F++C LLLGNVW++EL+I+ R + + N N++IQL T RKLSL Sbjct: 12 RFQTCRLLLGNVWNRELTIIQRRILRKLRNKKRSIKRKIYSRENLNSYIQLQTTRKLSLN 71 Query: 787 Y 785 Y Sbjct: 72 Y 72 >ref|YP_002000578.1| ribosomal protein S4 [Oryza sativa Japonica Group] gi|92700092|dbj|BAC19883.2| Ribosomal protein S4 [Oryza sativa Japonica Group] Length = 352 Score = 83.2 bits (204), Expect(2) = 1e-21 Identities = 61/178 (34%), Positives = 85/178 (47%), Gaps = 37/178 (20%) Frame = -3 Query: 785 LHR-RERTTSEFF*FLLDLETRLGVLLVCTHFC---PPARQLISHRRVCVK----TVRRS 630 +HR RERT+ + FLL+ ETRL V+LV HFC P ARQLISHRRVC+ T+ Sbjct: 73 MHRGRERTS--YIPFLLNQETRLDVILVRLHFCDTLPQARQLISHRRVCLNNGLVTITHL 130 Query: 629 VQKFGDLFSAPYS-----------------------------KLWLKSRISPSEWLHLLK 537 GDL S + ++W K++ +EW LL Sbjct: 131 KVSHGDLISFQENDARTRGEEIRRSFYIDILVGKIIGKLLPVRIWRKTK---TEWFRLLT 187 Query: 536 TKAGSHILMKSDFFERFAFYYARSRHRKI*EDWQCSKCLGSHFAEHNKMKSHLYNFTW 363 T+ +L+KS F + Y + + CLGS FAEHN+MK +L++F + Sbjct: 188 TQRVCRLLLKSWFLQELRSYMQEEDLERTKKFGSAKVCLGSSFAEHNRMKRNLFHFKY 245 Score = 47.8 bits (112), Expect(2) = 1e-21 Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 2/61 (3%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVV--ANQNTHIQLATCRKLSLF 788 +FK+C LLLGNVW++ELS++ RN+ N N++I+L T RKLSL+ Sbjct: 5 RFKTCRLLLGNVWNRELSLIQRRILRRLRNKRRSIKRNLSQRENLNSNIKLQTTRKLSLY 64 Query: 787 Y 785 Y Sbjct: 65 Y 65 >gb|AHA47128.1| ribosomal protein S4 (mitochondrion) [Amborella trichopoda] Length = 354 Score = 85.9 bits (211), Expect(2) = 3e-21 Identities = 67/178 (37%), Positives = 90/178 (50%), Gaps = 39/178 (21%) Frame = -3 Query: 785 LHRRERTTSEFF*FLLDLETRLGVLLVCTHFC---PPARQLISHRRVCVK----TVRRSV 627 +HR TS + FLL+LETRL V+LV HFC P ARQLISHRR+CV ++ R Sbjct: 73 MHRGTERTS-YIPFLLNLETRLDVILVRLHFCETLPQARQLISHRRLCVNNGMVSITRLK 131 Query: 626 QKFGDLFSAP---------------YSKLWLKSRI-------------SPSEWLHLLKTK 531 GDL S Y ++ ++ I + +EW LLKTK Sbjct: 132 VSHGDLISLKENYARTRGEERRRFFYIEILVEKMIGKFLDHPVRMWRRTKTEWFRLLKTK 191 Query: 530 AGSHILMKSDFFERFAFYYARSRHRKI*EDWQCSK----CLGSHFAEHNKMKSHLYNF 369 G +L+KS F ++ RS ++ ED + + CLGS FAEHN+MK +LY F Sbjct: 192 RGCRLLLKSRFLQQL-----RSSMQE--EDLERTNPFGVCLGSSFAEHNRMKRNLYYF 242 Score = 43.9 bits (102), Expect(2) = 3e-21 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVVA--NQNTHIQLATCRKLSLF 788 +F++C LLGNVW++EL+I+ R + + N N++I+L T RKLSLF Sbjct: 5 RFQTCRPLLGNVWNRELTIIQRRILRRLRNKKRSIKRKISSRKNLNSYIKLQTTRKLSLF 64 Query: 787 Y 785 Y Sbjct: 65 Y 65 >gb|AHC94278.1| ribosomal protein S4, partial (mitochondrion) [Amborella trichopoda] Length = 324 Score = 85.9 bits (211), Expect(2) = 3e-21 Identities = 67/178 (37%), Positives = 90/178 (50%), Gaps = 39/178 (21%) Frame = -3 Query: 785 LHRRERTTSEFF*FLLDLETRLGVLLVCTHFC---PPARQLISHRRVCVK----TVRRSV 627 +HR TS + FLL+LETRL V+LV HFC P ARQLISHRR+CV ++ R Sbjct: 73 MHRGTERTS-YIPFLLNLETRLDVILVRLHFCETLPQARQLISHRRLCVNNGMVSITRLK 131 Query: 626 QKFGDLFSAP---------------YSKLWLKSRI-------------SPSEWLHLLKTK 531 GDL S Y ++ ++ I + +EW LLKTK Sbjct: 132 VSHGDLISLKENYARTRGEERRRFFYIEILVEKMIGKFLDHPVRMWRRTKTEWFRLLKTK 191 Query: 530 AGSHILMKSDFFERFAFYYARSRHRKI*EDWQCSK----CLGSHFAEHNKMKSHLYNF 369 G +L+KS F ++ RS ++ ED + + CLGS FAEHN+MK +LY F Sbjct: 192 RGCRLLLKSRFLQQL-----RSSMQE--EDLERTNPFGVCLGSSFAEHNRMKRNLYYF 242 Score = 43.9 bits (102), Expect(2) = 3e-21 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVVA--NQNTHIQLATCRKLSLF 788 +F++C LLGNVW++EL+I+ R + + N N++I+L T RKLSLF Sbjct: 5 RFQTCRPLLGNVWNRELTIIQRRILRRLRNKKRSIKRKISSRKNLNSYIKLQTTRKLSLF 64 Query: 787 Y 785 Y Sbjct: 65 Y 65 >ref|YP_173472.1| ribosomal protein S4 [Nicotiana tabacum] Length = 349 Score = 79.0 bits (193), Expect(2) = 1e-19 Identities = 61/172 (35%), Positives = 84/172 (48%), Gaps = 33/172 (19%) Frame = -3 Query: 785 LHR-RERTTSEFF*FLLDLETRLGVLLVCTHFC---PPARQLISHRRVCVKTVRRSVQKF 618 +HR RERT+ + FLL+ ETR V+ V HFC P ARQ ISHRRVCV ++ F Sbjct: 77 MHRGRERTS--YIPFLLNPETRSDVIPVRLHFCETIPQARQPISHRRVCVNNGMVNITHF 134 Query: 617 ----GDLFSAP---------------YSKLWLKS----------RISPSEWLHLLKTKAG 525 GD+ S Y ++ ++ R + +EW LLKTK G Sbjct: 135 KLSHGDIISFQENDARTRGEEIKRSFYIEISVEKIIGKFLDHPWRRTKTEWFRLLKTKRG 194 Query: 524 SHILMKSDFFERFAFYYARSRHRKI*EDWQCSKCLGSHFAEHNKMKSHLYNF 369 +L+KS F ++ + + CLGS FAEHN+MK +LY+F Sbjct: 195 CRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHF 246 Score = 45.4 bits (106), Expect(2) = 1e-19 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVVA--NQNTHIQLATCRKLSLF 788 +FK+C LL GNVW++EL+I+ R + + N N++IQ T RKLSLF Sbjct: 9 RFKTCRLLSGNVWNRELTIIQRRILRRLRNKKRSIKRKIYSRENLNSYIQSQTTRKLSLF 68 Query: 787 Y 785 Y Sbjct: 69 Y 69 >ref|YP_717175.1| ribosomal protein S4 [Brassica napus] gi|37591124|dbj|BAC98926.1| ribosomal protein S4 [Brassica napus] Length = 362 Score = 80.5 bits (197), Expect(2) = 1e-19 Identities = 61/175 (34%), Positives = 82/175 (46%), Gaps = 39/175 (22%) Frame = -3 Query: 785 LHRRERTTSEFF*FLLDLETRLGVLLVCTHFC---PPARQLISHRRVCV----------- 648 +HR + TS + FLL+LETR V+L+ HF P ARQLISHRRVCV Sbjct: 87 MHRGTKRTS-YIPFLLNLETRFDVILLRLHFLETIPQARQLISHRRVCVNKGMVSITHLK 145 Query: 647 ------------------KTVRRSVQK-------FGDLFSAPYSKLWLKSRISPSEWLHL 543 + +RRS K G L P ++W +S+ +EW HL Sbjct: 146 LSHGDIISFQENNAIIRGEEIRRSFYKEILVEKIIGKLLHQPL-RMWRRSK---TEWFHL 201 Query: 542 LKTKAGSHILMKSDFFERFAFYYARSRHRKI*EDWQCSKCLGSHFAEHNKMKSHL 378 LKTK G +L+KS F ++ + + CLGS FAEH +MK +L Sbjct: 202 LKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNL 256 Score = 43.5 bits (101), Expect(2) = 1e-19 Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 3/62 (4%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVVANQ---NTHIQLATCRKLSL 791 +F++C LLLGNVW++EL+I+ + + ++ ++IQL T RKLSL Sbjct: 18 RFQTCRLLLGNVWNRELTIIQRRILRRLRNRKRSIKKRKIYSKKYLTSYIQLQTTRKLSL 77 Query: 790 FY 785 FY Sbjct: 78 FY 79 >gb|ACH78250.1| ribosomal protein S4 [Arabidopsis thaliana] Length = 362 Score = 80.5 bits (197), Expect(2) = 1e-19 Identities = 61/175 (34%), Positives = 82/175 (46%), Gaps = 39/175 (22%) Frame = -3 Query: 785 LHRRERTTSEFF*FLLDLETRLGVLLVCTHFC---PPARQLISHRRVCV----------- 648 +HR + TS + FLL+LETR V+L+ HF P ARQLISHRRVCV Sbjct: 87 MHRGTKRTS-YIPFLLNLETRFDVILLRLHFLETIPQARQLISHRRVCVNKGMVSITHFK 145 Query: 647 ------------------KTVRRSVQK-------FGDLFSAPYSKLWLKSRISPSEWLHL 543 + +RRS K G L P ++W +S+ +EW HL Sbjct: 146 LSHGDIISFQENNAIIRGEEIRRSFYKEILVEKIIGKLLHQPL-RMWRRSK---TEWFHL 201 Query: 542 LKTKAGSHILMKSDFFERFAFYYARSRHRKI*EDWQCSKCLGSHFAEHNKMKSHL 378 LKTK G +L+KS F ++ + + CLGS FAEH +MK +L Sbjct: 202 LKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNL 256 Score = 43.5 bits (101), Expect(2) = 1e-19 Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 3/62 (4%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVVANQ---NTHIQLATCRKLSL 791 +F++C LLLGNVW++EL+I+ + + ++ ++IQL T RKLSL Sbjct: 18 RFQTCRLLLGNVWNRELTIIQRRILRRLRNRKRSIKKRKIYSKKYLTSYIQLQTTRKLSL 77 Query: 790 FY 785 FY Sbjct: 78 FY 79 >ref|XP_004253314.1| PREDICTED: ribosomal protein S4, mitochondrial-like [Solanum lycopersicum] Length = 449 Score = 77.4 bits (189), Expect(2) = 3e-19 Identities = 60/172 (34%), Positives = 83/172 (48%), Gaps = 33/172 (19%) Frame = -3 Query: 785 LHR-RERTTSEFF*FLLDLETRLGVLLVCTHFC---PPARQLISHRRVCVKTVRRSVQKF 618 +HR RERT+ + FLL+ ETR V+ V HFC P ARQ ISHRRVCV ++ F Sbjct: 177 MHRGRERTS--YIPFLLNPETRSDVIPVRLHFCETIPQARQPISHRRVCVNNGMVNITHF 234 Query: 617 ----GDLFSAP---------------YSKLWLKS----------RISPSEWLHLLKTKAG 525 GD+ S Y ++ ++ R + +EW LLKTK G Sbjct: 235 KLSHGDIISFQENDARTRGEEIKRSFYIEISVEKIIGKFLDHPWRRTKTEWFRLLKTKRG 294 Query: 524 SHILMKSDFFERFAFYYARSRHRKI*EDWQCSKCLGSHFAEHNKMKSHLYNF 369 +L+KS F ++ + + CLGS FAEHN+MK + Y+F Sbjct: 295 CRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNFYHF 346 Score = 45.4 bits (106), Expect(2) = 3e-19 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVVA--NQNTHIQLATCRKLSLF 788 +FK+C LL GNVW++EL+I+ R + + N N++IQ T RKLSLF Sbjct: 109 RFKTCRLLSGNVWNRELTIIQRRILGRLRNKKRSIKRKIYSRENLNSYIQSQTTRKLSLF 168 Query: 787 Y 785 Y Sbjct: 169 Y 169 >ref|YP_005090421.1| rps4 gene product (mitochondrion) [Boea hygrometrica] gi|340549497|gb|AEK53318.1| ribosomal protein S4 (mitochondrion) [Boea hygrometrica] Length = 329 Score = 72.8 bits (177), Expect(2) = 6e-18 Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 23/162 (14%) Frame = -3 Query: 785 LHRRERTTSEFF*FLLDLETRLGVLLVCTHF---CPPARQLISHRRVCVKTVRRSVQKF- 618 +HRR + + + FLL+ ETR V+ V HF P ARQ ISHRRVCV ++ F Sbjct: 73 MHRRRKRS--YIPFLLNPETRSDVIPVRLHFRETIPQARQTISHRRVCVNNRMVNIIHFK 130 Query: 617 ---GDLFSAPYS----------------KLWLKSRISPSEWLHLLKTKAGSHILMKSDFF 495 GD+ S + ++W +++ +EW KT G +L+KS F Sbjct: 131 VSHGDIISFQENDARTEKIIGKFLDRPVRMWRRTK---TEWFRKFKTLKGCRLLLKSQFL 187 Query: 494 ERFAFYYARSRHRKI*EDWQCSKCLGSHFAEHNKMKSHLYNF 369 ++ +K CLGS+F EHN+MK +LY+F Sbjct: 188 QQLRSSMQEEDTKKFGSK---KVCLGSYFDEHNRMKRNLYHF 226 Score = 45.8 bits (107), Expect(2) = 6e-18 Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVVA--NQNTHIQLATCRKLSLF 788 +FK+C LLLGNVW++EL+I+ R + + N N++IQ T RKLSLF Sbjct: 5 RFKTCRLLLGNVWNRELTIIQRRILKRLRNKKRSIKRKIYSRKNLNSYIQSQTTRKLSLF 64 Query: 787 Y 785 + Sbjct: 65 H 65 >ref|YP_008802509.1| ribosomal protein S4 (mitochondrion) [Asclepias syriaca] gi|556562347|gb|AGZ63043.1| ribosomal protein S4 (mitochondrion) [Asclepias syriaca] Length = 274 Score = 96.7 bits (239), Expect = 1e-17 Identities = 66/175 (37%), Positives = 87/175 (49%), Gaps = 36/175 (20%) Frame = -3 Query: 785 LHRRERTTSEFF*FLLDLETRLGVLLVCTHFC---PPARQLISHRRVCVKTVRRSVQKF- 618 +HRR TS + FLL+LETRL V+LV HFC P ARQLISHRRVCV S+ F Sbjct: 1 MHRRTERTS-YIPFLLNLETRLDVILVRLHFCETIPQARQLISHRRVCVNNGMVSITHFK 59 Query: 617 ---GDLFSAPYS-----------------------------KLWLKSRISPSEWLHLLKT 534 GDL S + ++W +++ +EW LLKT Sbjct: 60 VSHGDLISFQENVARTQEIRRFFYIEILIEKIIGKFLDHPIRMWRRTK---TEWFRLLKT 116 Query: 533 KAGSHILMKSDFFERFAFYYARSRHRKI*EDWQCSKCLGSHFAEHNKMKSHLYNF 369 K G +L+KS F ++ Y + + CLGS FAEHN+MK +LY+F Sbjct: 117 KRGCRLLLKSRFLQQLRSYMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHF 171 >ref|NP_064046.2| rps4 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris] gi|346683270|ref|YP_004842202.1| ribosomal protein S4 [Beta macrocarpa] gi|87248052|gb|ABD36080.1| ribosomal protein S4 [Beta vulgaris subsp. vulgaris] gi|148491424|dbj|BAA99356.2| ribosomal protein S4 [Beta vulgaris subsp. vulgaris] gi|320148708|emb|CBJ23346.1| ribosomal protein S4 [Beta vulgaris subsp. maritima] gi|345500188|emb|CBX25007.1| ribosomal protein S4 [Beta macrocarpa] gi|384939188|emb|CBL52035.1| ribosoma lprotein S4 (mitochondrion) [Beta vulgaris subsp. maritima] Length = 315 Score = 70.5 bits (171), Expect(2) = 4e-17 Identities = 61/189 (32%), Positives = 86/189 (45%), Gaps = 51/189 (26%) Frame = -3 Query: 785 LHRRERTTSEFF*FLLDLETRLGVLLVCTHFC---PPARQLISHRRVCVKTVRRSVQKF- 618 +HRR + TS + FLL+LETRL V+LV HFC P ARQLISHR+VCV ++ F Sbjct: 73 MHRRTKRTS-YIPFLLNLETRLDVILVRLHFCETIPQARQLISHRKVCVNNGIVNISHFK 131 Query: 617 ---GDLFSAP-------------------------------------------YSKLWLK 576 GD+ S + ++ ++ Sbjct: 132 VSHGDIISFQENYARTRGEEIRKFFYIKILVEKIIGKLRGHRGRLRSRSKTEWFRRVRMR 191 Query: 575 SRISPSEWLHLLKTKAGSHILMKSDFFERFAFYYARSRHRKI*E-DWQCSKCLGSHFAEH 399 SR S +EW LKTK G +L+K F ++ H + E D + +K GS AEH Sbjct: 192 SR-SKTEWFRRLKTKKGCRLLLKDRFLQKL--------HSSMQEQDLERTKKFGSD-AEH 241 Query: 398 NKMKSHLYN 372 N+MK + Y+ Sbjct: 242 NRMKRNFYH 250 Score = 45.4 bits (106), Expect(2) = 4e-17 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVVA--NQNTHIQLATCRKLSLF 788 +FK+C L+ GNVW+KEL++ + + + N+N++IQL T RKLSLF Sbjct: 5 RFKTCRLVSGNVWNKELTLSQRIALRKWRMKKKSIKKKMYSRKNRNSYIQLRTTRKLSLF 64 Query: 787 Y 785 Y Sbjct: 65 Y 65 >ref|YP_002608192.1| ribosomal protein S4 [Carica papaya] gi|170522371|gb|ACB20481.1| ribosomal protein S4, partial (mitochondrion) [Carica papaya] Length = 352 Score = 77.4 bits (189), Expect(2) = 8e-17 Identities = 65/184 (35%), Positives = 89/184 (48%), Gaps = 45/184 (24%) Frame = -3 Query: 785 LHRRERTTSEFF*FLLDLETRLGVLLVCTHF---CPPARQLISHRRVCV----------- 648 +HR TS + F L+ ETRL V+ V HF P ARQ ISHRRVCV Sbjct: 77 MHRGTERTS-YIPFPLNPETRLDVIPVRLHFRETLPQARQPISHRRVCVNNGMVSITRLK 135 Query: 647 ------------------KTVRR------SVQKFGDLFSAPYSKLWLKSRISPSEWLHLL 540 + +RR SV+K F ++W +++ ++W HLL Sbjct: 136 LSHGDIISFQENDARIRGEEIRRSFYIEISVEKIIGKFRNHPVRMWRRTK---TKWFHLL 192 Query: 539 KTKAGSHILMKSDFFERFAFYYARSRHRKI*EDWQCSK-------CLGSHFAEHNKMKSH 381 KTK G +L+KS F ++ RS +K ED + +K CLGS FAEHN+MK + Sbjct: 193 KTKRGCRLLLKSRFLQKL-----RSSMQK--EDLERTKKFGSEKVCLGSSFAEHNRMKRN 245 Query: 380 LYNF 369 LY+F Sbjct: 246 LYHF 249 Score = 37.4 bits (85), Expect(2) = 8e-17 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVV--ANQNTHIQLATCRKLSLF 788 +FK+C LL GNV ++EL+I+ R + N N++IQ T RKLSLF Sbjct: 9 RFKTCRLLSGNVRNRELTIIQRRILRRLRNKKRSIKRKIYPRKNLNSYIQSQTTRKLSLF 68 Query: 787 Y 785 + Sbjct: 69 H 69 >gb|AAW47271.1| ribosomal protein S4 [Eichhornia crassipes] Length = 311 Score = 73.6 bits (179), Expect(2) = 1e-16 Identities = 58/177 (32%), Positives = 81/177 (45%), Gaps = 36/177 (20%) Frame = -3 Query: 785 LHR-RERTTSEFF*FLLDLETRLGVLLVCTHFC---PPARQLISHRRVCVKTVRRSVQKF 618 +HR RERT+ + FLL+ ETR V+ V HF P ARQ ISHRRVCV S+ F Sbjct: 70 MHRGRERTS--YIPFLLNQETRSDVIPVRLHFSDTLPQARQPISHRRVCVNNGLVSITHF 127 Query: 617 ----GDLFSAPYS----------------------------KLWLKSRISPSEWLHLLKT 534 GD S + ++W +++ +EW LLKT Sbjct: 128 QVSHGDQISFHENDAGEEKKIRRSFYIDISVGKIIGKFLPVRMWRRTK---TEWFRLLKT 184 Query: 533 KAGSHILMKSDFFERFAFYYARSRHRKI*EDWQCSKCLGSHFAEHNKMKSHLYNFTW 363 + G +L+KS F + + CLGS FAEHN+MK +L++F + Sbjct: 185 QRGCRLLLKSRFLQELRSSMQEEYLERTKRFGSAKVCLGSSFAEHNRMKKNLFHFKY 241 Score = 40.4 bits (93), Expect(2) = 1e-16 Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVV--ANQNTHIQLATCRKLSLF 788 +FK+C LLLGNV ++ELS++ RN+ N+N++I+ T RKL LF Sbjct: 2 RFKTCRLLLGNVRNRELSLIQRRILRRLRNKRKSIKRNLSLRENRNSNIKSQTTRKLPLF 61 Query: 787 Y 785 Y Sbjct: 62 Y 62 >gb|AEK66732.1| ribosomal protein S4 [Ferrocalamus rimosivaginus] gi|372861933|gb|AEX98086.1| ribosomal protein S4 (mitochondrion) [Ferrocalamus rimosivaginus] Length = 344 Score = 73.9 bits (180), Expect(2) = 2e-16 Identities = 57/178 (32%), Positives = 82/178 (46%), Gaps = 37/178 (20%) Frame = -3 Query: 785 LHR-RERTTSEFF*FLLDLETRLGVLLVCTHFC---PPARQLISHRRVCVK----TVRRS 630 +HR RERT+ + FLL+ ETR V+ V HF P ARQ ISHRRVC+ T+ Sbjct: 73 MHRGRERTS--YIPFLLNQETRSDVIPVRLHFSDTLPQARQPISHRRVCLNNGLVTITHL 130 Query: 629 VQKFGDLFSAPYS-----------------------------KLWLKSRISPSEWLHLLK 537 GDL S + ++W +++ +EW LL Sbjct: 131 KVSHGDLISFQENDARTRGEEIRRSFYIDISVGKIIGKFLPVRIWRRTK---TEWFRLLT 187 Query: 536 TKAGSHILMKSDFFERFAFYYARSRHRKI*EDWQCSKCLGSHFAEHNKMKSHLYNFTW 363 T+ G +L+KS F + Y + + CLGS FAEHN+MK +L++F + Sbjct: 188 TQRGCRLLLKSWFLQELRSYMQEEDLERTKKFGSAKVCLGSSFAEHNRMKRNLFHFKY 245 Score = 39.7 bits (91), Expect(2) = 2e-16 Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVV--ANQNTHIQLATCRKLSLF 788 +FK+C LL GNV ++ELS++ RN+ N N++I+L T RKLSL+ Sbjct: 5 RFKTCRLLPGNVRNRELSLIQRRILRRLRNKRRSIKRNLSQRENLNSNIKLQTTRKLSLY 64 Query: 787 Y 785 Y Sbjct: 65 Y 65 >gb|AGI48778.1| ribosomal protein S4 (mitochondrion) [Lolium perenne] Length = 344 Score = 76.6 bits (187), Expect(2) = 2e-16 Identities = 58/178 (32%), Positives = 83/178 (46%), Gaps = 37/178 (20%) Frame = -3 Query: 785 LHR-RERTTSEFF*FLLDLETRLGVLLVCTHFC---PPARQLISHRRVCVK----TVRRS 630 +HR RERT+ + FLL+ ETR V+ V HF P ARQ ISHRRVC+ T+ Sbjct: 73 MHRGRERTS--YIPFLLNQETRSDVIPVRLHFSDTLPQARQPISHRRVCLNNGLVTITHL 130 Query: 629 VQKFGDLFSAPYS-----------------------------KLWLKSRISPSEWLHLLK 537 GDL S + K+W +++ +EW LL Sbjct: 131 KVSHGDLISFKENDARTRGEEIRRSFYIDISVGKIVGKFLPAKIWRRTK---TEWFRLLT 187 Query: 536 TKAGSHILMKSDFFERFAFYYARSRHRKI*EDWQCSKCLGSHFAEHNKMKSHLYNFTW 363 T+ G +L+KS F ++ Y + + CLGS FAEHN+MK +L++F + Sbjct: 188 TQRGCRLLLKSLFLQKLRSYMQEEDFERTKKFGSAKVCLGSSFAEHNRMKRNLFHFKY 245 Score = 36.6 bits (83), Expect(2) = 2e-16 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVV--ANQNTHIQLATCRKLSLF 788 +FK+C LL GNV ++ELS++ RN+ N N++I+ T RKLS++ Sbjct: 5 RFKTCRLLPGNVRNRELSLIQRRILRRLRNKRRSIKRNLSQRENLNSNIKSQTTRKLSIY 64 Query: 787 Y 785 Y Sbjct: 65 Y 65 >ref|YP_514660.1| ribosomal protein S4 [Oryza sativa Indica Group] gi|289065037|ref|YP_003433848.1| ribosomal protein small subunit 4 [Oryza rufipogon] gi|3025870|gb|AAC26506.1| ribosomal protein S4 [Oryza sativa] gi|74100098|gb|AAZ99262.1| ribosomal protein S4 (mitochondrion) [Oryza sativa Indica Group] gi|74100153|gb|AAZ99316.1| ribosomal protein S4 (mitochondrion) [Oryza sativa Japonica Group] gi|74100207|gb|AAZ99369.1| ribosomal protein S4 (mitochondrion) [Oryza sativa Japonica Group] gi|285026119|dbj|BAI67952.1| ribosomal protein small subunit 4 [Oryza rufipogon] gi|285026169|dbj|BAI68001.1| ribosomal protein small subunit 4 [Oryza sativa Indica Group] gi|353685225|gb|AER12988.1| ribosomal protein S4 (mitochondrion) [Oryza sativa Indica Group] gi|353685292|gb|AER13054.1| ribosomal protein S4 (mitochondrion) [Oryza sativa Indica Group] gi|374277597|gb|AEZ03703.1| ribosomal protein S4 (mitochondrion) [Oryza sativa Indica Group] gi|374277693|gb|AEZ03798.1| ribosomal protein S4 (mitochondrion) [Oryza sativa Indica Group] Length = 352 Score = 75.5 bits (184), Expect(2) = 3e-16 Identities = 58/178 (32%), Positives = 82/178 (46%), Gaps = 37/178 (20%) Frame = -3 Query: 785 LHR-RERTTSEFF*FLLDLETRLGVLLVCTHFC---PPARQLISHRRVCVK----TVRRS 630 +HR RERT+ + FLL+ ETR V+ V HFC P ARQ ISHRRVC+ T+ Sbjct: 73 MHRGRERTS--YIPFLLNQETRSDVIPVRLHFCDTLPQARQPISHRRVCLNNGLVTITHL 130 Query: 629 VQKFGDLFSAPYS-----------------------------KLWLKSRISPSEWLHLLK 537 GDL S + ++W K++ +EW LL Sbjct: 131 KVSHGDLISFQENDARTRGEEIRRSFYIDISVGKIIGKLLPVRIWRKTK---TEWFRLLT 187 Query: 536 TKAGSHILMKSDFFERFAFYYARSRHRKI*EDWQCSKCLGSHFAEHNKMKSHLYNFTW 363 T+ +L+KS F + Y + + CLGS FAEHN+MK +L++F + Sbjct: 188 TQRVCRLLLKSWFLQELRSYMQEEDLERTKKFGSAKVCLGSSFAEHNRMKRNLFHFKY 245 Score = 37.4 bits (85), Expect(2) = 3e-16 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Frame = -1 Query: 961 QFKSCHLLLGNVWHKELSIVXXXXXXXXXXXXXXXXRNVV--ANQNTHIQLATCRKLSLF 788 +FK+C LL GNV ++ELS++ RN+ N N++I+ T RKLSL+ Sbjct: 5 RFKTCRLLPGNVRNRELSLIQRRILRRLRNKRRSIKRNLSQRENLNSNIKSQTTRKLSLY 64 Query: 787 Y 785 Y Sbjct: 65 Y 65