BLASTX nr result

ID: Papaver25_contig00030910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00030910
         (899 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004297911.1| PREDICTED: F-box protein At1g47340-like [Fra...    61   5e-07
ref|XP_006368650.1| hypothetical protein POPTR_0001s07280g [Popu...    57   7e-06
ref|XP_002297705.1| hypothetical protein POPTR_0001s07280g [Popu...    57   7e-06

>ref|XP_004297911.1| PREDICTED: F-box protein At1g47340-like [Fragaria vesca subsp.
           vesca]
          Length = 358

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 12/190 (6%)
 Frame = -1

Query: 899 NGLVCF--------IDRKTYAVRIYNVSTREATPWVKSTLLAEENGKLIKNKDNTIEIKN 744
           NGL+C          D  +Y VR+ N +T E      S+ +   +       D T     
Sbjct: 86  NGLICLHLSNYGGVFDNPSYPVRVLNPTTLECITLPHSSCIHPTS-------DVT----- 133

Query: 743 NLPPIYQFGFDPEKKEYKVFCFWRLGARPEHFRWNSWKRHDYAIWEVLTVGRDTKWRKIN 564
                Y FGF+P   EYKV    RL  + EH    SW      ++++ T+G  + WR+I 
Sbjct: 134 -----YHFGFNPLADEYKVLQVQRLSCKGEH----SW------VYKIFTLGASS-WRRIE 177

Query: 563 MVPNEKNKIIINEVLSPYEIGR----QPVYANGTLYWSNKVRSSAVKWGDPDVIVALDVG 396
                  + +  + L+P++       + VYA+G +YW  +           DVI+  + G
Sbjct: 178 -------EDLDVDRLAPFDSSNSYFCKGVYADGVMYWLTR-----------DVILTFEFG 219

Query: 395 SEKFRVIPIP 366
            EKFRV+P+P
Sbjct: 220 DEKFRVMPLP 229


>ref|XP_006368650.1| hypothetical protein POPTR_0001s07280g [Populus trichocarpa]
           gi|550346724|gb|ERP65219.1| hypothetical protein
           POPTR_0001s07280g [Populus trichocarpa]
          Length = 420

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 1/222 (0%)
 Frame = -1

Query: 899 NGLVCFIDRKTYAVRIYNVSTREATPWVKSTLLAEENGKLIKNKDNTIEIKNNLPPIYQF 720
           NGL+  ++   +++ +YN STRE      S L      +L  + D++    ++L   Y F
Sbjct: 98  NGLLALLN-SDFSIALYNPSTREKKMIPVSPL------ELPNDLDDSKV--SSLFNFYGF 148

Query: 719 GFDPEKKEYKVFCFWRL-GARPEHFRWNSWKRHDYAIWEVLTVGRDTKWRKINMVPNEKN 543
           G DP  ++YKV  F    G  P+ F     K +           +   W++I+  P +  
Sbjct: 149 GHDPINEDYKVVRFIHFYGDSPDGFFHCEVKVYSL---------KSNSWKRIDDYPYDLR 199

Query: 542 KIIINEVLSPYEIGRQPVYANGTLYWSNKVRSSAVKWGDPDVIVALDVGSEKFRVIPIPN 363
            I+  +       G   V+AN  ++W   V     + G  D+IVA D+G+E+F++IP P+
Sbjct: 200 FILPPDYHPRCRRG-YGVFANSAVHWKATVVGKGKENGS-DLIVAFDLGAEEFKIIPQPD 257

Query: 362 FILDEPREKSFRRPIDMLILGGRVALLFRMEFYVVKLWMLDD 237
           +  +E         +++ +LGG + +        V++W++ +
Sbjct: 258 YSSNE-------HEMNVGVLGGCLCVFCNKNCKQVEIWVMKE 292


>ref|XP_002297705.1| hypothetical protein POPTR_0001s07280g [Populus trichocarpa]
           gi|566147699|ref|XP_006368651.1| S haplotype-specific
           F-box protein 1 [Populus trichocarpa]
           gi|222844963|gb|EEE82510.1| hypothetical protein
           POPTR_0001s07280g [Populus trichocarpa]
           gi|550346725|gb|ERP65220.1| S haplotype-specific F-box
           protein 1 [Populus trichocarpa]
          Length = 408

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 1/222 (0%)
 Frame = -1

Query: 899 NGLVCFIDRKTYAVRIYNVSTREATPWVKSTLLAEENGKLIKNKDNTIEIKNNLPPIYQF 720
           NGL+  ++   +++ +YN STRE      S L      +L  + D++    ++L   Y F
Sbjct: 98  NGLLALLN-SDFSIALYNPSTREKKMIPVSPL------ELPNDLDDSKV--SSLFNFYGF 148

Query: 719 GFDPEKKEYKVFCFWRL-GARPEHFRWNSWKRHDYAIWEVLTVGRDTKWRKINMVPNEKN 543
           G DP  ++YKV  F    G  P+ F     K +           +   W++I+  P +  
Sbjct: 149 GHDPINEDYKVVRFIHFYGDSPDGFFHCEVKVYSL---------KSNSWKRIDDYPYDLR 199

Query: 542 KIIINEVLSPYEIGRQPVYANGTLYWSNKVRSSAVKWGDPDVIVALDVGSEKFRVIPIPN 363
            I+  +       G   V+AN  ++W   V     + G  D+IVA D+G+E+F++IP P+
Sbjct: 200 FILPPDYHPRCRRG-YGVFANSAVHWKATVVGKGKENGS-DLIVAFDLGAEEFKIIPQPD 257

Query: 362 FILDEPREKSFRRPIDMLILGGRVALLFRMEFYVVKLWMLDD 237
           +  +E         +++ +LGG + +        V++W++ +
Sbjct: 258 YSSNE-------HEMNVGVLGGCLCVFCNKNCKQVEIWVMKE 292


Top