BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00030654
         (605 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY85203.1| RNA polymerase II second largest subunit [Dicentr...   348   5e-94
gb|AAY85223.1| RNA polymerase II second largest subunit [Nelumbo...   347   1e-93
gb|AAZ08461.1| RNA polymerase II second largest subunit [Liriode...   347   2e-93
gb|AAY85208.1| RNA polymerase II second largest subunit [Euptele...   347   2e-93
gb|AAY85235.1| RNA polymerase II second largest subunit [Tetrace...   346   3e-93
gb|AAY85196.1| RNA polymerase II second largest subunit [Chimona...   345   7e-93
gb|AAZ08460.1| RNA polymerase II second largest subunit [Eschsch...   344   1e-92
gb|AAY85216.1| RNA polymerase II second largest subunit [Hibbert...   343   2e-92
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su...   343   3e-92
gb|AAY85236.1| RNA polymerase II second largest subunit [Vitis p...   343   3e-92
ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II su...   342   4e-92
ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citr...   342   4e-92
gb|AAZ08462.1| RNA polymerase II second largest subunit [Platanu...   342   5e-92
gb|AAY89340.1| RNA polymerase II second largest subunit [Berberi...   342   5e-92
gb|AAY89339.1| RNA polymerase II second largest subunit [Berberi...   342   5e-92
gb|AAY85190.1| RNA polymerase II second largest subunit [Aextoxi...   342   6e-92
gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus not...   341   1e-91
ref|XP_003561873.1| PREDICTED: DNA-directed RNA polymerase II su...   341   1e-91
ref|XP_007025631.1| DNA-directed RNA polymerase family protein i...   340   1e-91
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta...   340   1e-91

>gb|AAY85203.1| RNA polymerase II second largest subunit [Dicentra formosa]
          Length = 873

 Score =  348 bits (894), Expect = 5e-94
 Identities = 171/201 (85%), Positives = 184/201 (91%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           VTK II++GHDCEEVT T+E  KVFIGKVPIMLRS YCTL  NSEKDL ELGECPYDQGG
Sbjct: 25  VTKRIIKKGHDCEEVTETQEFKKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGG 84

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YFIINGSEKVLIAQEKMSTNHVYVFK++QPNK+AYVAEVRSMAES +RPPSSMFV M+SR
Sbjct: 85  YFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSR 144

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             AKG SSGQ IRATLPYIR +IPII+VFRALGFVADKDILEHICYDF D++MM+LLRPS
Sbjct: 145 ASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPS 204

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QNQQVALDYIGKRG
Sbjct: 205 LEEAFVIQNQQVALDYIGKRG 225


>gb|AAY85223.1| RNA polymerase II second largest subunit [Nelumbo nucifera]
          Length = 865

 Score =  347 bits (891), Expect = 1e-93
 Identities = 170/201 (84%), Positives = 184/201 (91%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           VTK +I++GHDCEEVT T+E  KVFIGKVPIMLRS YCTL  NSEKDL ELGECPYDQGG
Sbjct: 17  VTKRVIKKGHDCEEVTETQEFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGG 76

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YFIINGSEKVLIAQEKMSTNHVYVFK++QPNK+AYVAEVRSMAES +RPPSSMFV M+SR
Sbjct: 77  YFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSR 136

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             AKG SSGQ IRATLPYIR +IPII+VFRALGFVADKDILEHICYDF D++MM+LLRPS
Sbjct: 137 TSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPS 196

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QNQQVALDYIGKRG
Sbjct: 197 LEEAFVIQNQQVALDYIGKRG 217


>gb|AAZ08461.1| RNA polymerase II second largest subunit [Liriodendron tulipifera]
          Length = 942

 Score =  347 bits (890), Expect = 2e-93
 Identities = 169/201 (84%), Positives = 184/201 (91%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           VTK +I++GHDCEEVT T++  KVFIGKVPIMLRS YCTL  NSEKDL ELGECPYDQGG
Sbjct: 17  VTKRVIKKGHDCEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGG 76

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YFIINGSEKVLIAQEKMSTNHVYVFK++QPNK+AYVAEVRSMAES +RPPSSMFV M+SR
Sbjct: 77  YFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSR 136

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             AKG SSGQ IRATLPYIR +IPII+VFRALGFVADKDILEHICYDF D++MM+LLRPS
Sbjct: 137 ASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPS 196

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QNQQVALDYIGKRG
Sbjct: 197 LEEAFVIQNQQVALDYIGKRG 217


>gb|AAY85208.1| RNA polymerase II second largest subunit [Euptelea polyandra]
          Length = 874

 Score =  347 bits (890), Expect = 2e-93
 Identities = 170/201 (84%), Positives = 183/201 (91%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           VTK II++GHDCEEVT T+E  KVFIGKVPIMLRS YCTL  NSEKDL ELGECPYDQGG
Sbjct: 25  VTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGG 84

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YFIINGSEKVLIAQEKMSTNHVYVFK++QPNK+AYV EVRSMAES +RPPSSMFV M+SR
Sbjct: 85  YFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMFVRMLSR 144

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             AKG SSGQ IRATLPYIR +IPII+VFRALGFVADKDILEHICYDF D++MM+LLRPS
Sbjct: 145 ASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPS 204

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QNQQVALDYIGKRG
Sbjct: 205 LEEAFVIQNQQVALDYIGKRG 225


>gb|AAY85235.1| RNA polymerase II second largest subunit [Tetracentron sinense]
          Length = 951

 Score =  346 bits (887), Expect = 3e-93
 Identities = 169/201 (84%), Positives = 183/201 (91%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           VTK II++GHDCEEVT T+E  KVFIGKVPIMLRS YCT+  NSEKDL ELGECPYDQGG
Sbjct: 25  VTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGG 84

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YFIINGSEKVLIAQEKMSTNHVYVFK++QPNK+AYVAEVRSMAES +RPPS MFV M+SR
Sbjct: 85  YFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSGMFVRMLSR 144

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             AKG SSGQ IRATLPYIR +IPII+VFRALGFVADKDILEHICYDF D++MM+LLRPS
Sbjct: 145 ASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPS 204

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QNQQVALDYIGKRG
Sbjct: 205 LEEAFVIQNQQVALDYIGKRG 225


>gb|AAY85196.1| RNA polymerase II second largest subunit [Chimonanthus praecox]
          Length = 906

 Score =  345 bits (884), Expect = 7e-93
 Identities = 168/201 (83%), Positives = 184/201 (91%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           VTK II++GHDCEEVT T+E  KVFIGKVPIMLRS YCT+  NSEKDL ELGECPYDQGG
Sbjct: 25  VTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGG 84

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YFIINGSEKVLIAQEKMSTNHVYVFK++QPNK+AYVAEVRSMAE+ +RPPSSMFV M+SR
Sbjct: 85  YFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSSMFVRMLSR 144

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             +KG SSGQ IRATLPYIR +IPII+VFRALGFVADKDILEHICYDF D++MM+LLRPS
Sbjct: 145 ASSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPS 204

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QNQQVALDYIGKRG
Sbjct: 205 LEEAFVIQNQQVALDYIGKRG 225


>gb|AAZ08460.1| RNA polymerase II second largest subunit [Eschscholzia californica]
          Length = 951

 Score =  344 bits (882), Expect = 1e-92
 Identities = 168/201 (83%), Positives = 183/201 (91%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           VTK II++GHDCEEV  T++  KVFIG+VPIMLRS YCTL  NSEKDL ELGECPYDQGG
Sbjct: 25  VTKRIIKKGHDCEEVAETQDFTKVFIGRVPIMLRSSYCTLYQNSEKDLTELGECPYDQGG 84

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YFIINGSEKVLIAQEKMSTNHVYVFK++QPNK+AYVAEVRSMAES +RPPSSMFV M+SR
Sbjct: 85  YFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSR 144

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             AKG SSGQ IRATLPYIR +IPII+VFRALGFVADKDILEHICYDF D++MM+LLRPS
Sbjct: 145 ASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPS 204

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QNQQVALDYIGKRG
Sbjct: 205 LEEAFVIQNQQVALDYIGKRG 225


>gb|AAY85216.1| RNA polymerase II second largest subunit [Hibbertia scandens]
          Length = 873

 Score =  343 bits (881), Expect = 2e-92
 Identities = 167/201 (83%), Positives = 184/201 (91%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           VTK II++GHDCEEVT T++  KVFIGKVPIMLRS YCT+  NSEKDL ELGECP+DQGG
Sbjct: 25  VTKRIIKKGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPFDQGG 84

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YFIINGSEKVLIAQEKMSTNHVYVFK++QPNK+AYVAEVRSMAES +RPPSSMFV M+SR
Sbjct: 85  YFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSR 144

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             AKG SSGQ +RATLPYIR +IPII+VFRALGFVADKDILEHICYDF D++MM+LLRPS
Sbjct: 145 TSAKGGSSGQYVRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPS 204

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QNQQVALDYIGKRG
Sbjct: 205 LEEAFVIQNQQVALDYIGKRG 225


>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
           vinifera] gi|147841183|emb|CAN72948.1| hypothetical
           protein VITISV_033708 [Vitis vinifera]
           gi|302143287|emb|CBI21848.3| unnamed protein product
           [Vitis vinifera]
          Length = 1193

 Score =  343 bits (879), Expect = 3e-92
 Identities = 169/201 (84%), Positives = 183/201 (91%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           VTK II++GHD EEVT T+E  KVFIGKVPIMLRS YCT+  NSEKDL ELGECPYDQGG
Sbjct: 131 VTKRIIKKGHDLEEVTETQEFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGG 190

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YFIINGSEKVLIAQEKMSTNHVYVFK++QPNK+AYVAEVRSMAES +RPPSSMFV M+SR
Sbjct: 191 YFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSR 250

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             AKG SSGQ IRATLPYIR +IPII+VFRALGFVADKDILEHICYDF D++MM+LLRPS
Sbjct: 251 TSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPS 310

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QNQQVALDYIGKRG
Sbjct: 311 LEEAFVIQNQQVALDYIGKRG 331


>gb|AAY85236.1| RNA polymerase II second largest subunit [Vitis piasezkii]
          Length = 951

 Score =  343 bits (879), Expect = 3e-92
 Identities = 169/201 (84%), Positives = 183/201 (91%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           VTK II++GHD EEVT T+E  KVFIGKVPIMLRS YCT+  NSEKDL ELGECPYDQGG
Sbjct: 25  VTKRIIKKGHDLEEVTETQEFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGG 84

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YFIINGSEKVLIAQEKMSTNHVYVFK++QPNK+AYVAEVRSMAES +RPPSSMFV M+SR
Sbjct: 85  YFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSR 144

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             AKG SSGQ IRATLPYIR +IPII+VFRALGFVADKDILEHICYDF D++MM+LLRPS
Sbjct: 145 TSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPS 204

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QNQQVALDYIGKRG
Sbjct: 205 LEEAFVIQNQQVALDYIGKRG 225


>ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Citrus
           sinensis]
          Length = 1195

 Score =  342 bits (878), Expect = 4e-92
 Identities = 168/201 (83%), Positives = 184/201 (91%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           VTK +I++GHD EEVT T++  KVFIGKVPIMLRS YCTL  NSEKDL ELGECPYDQGG
Sbjct: 132 VTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGG 191

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YFIINGSEKVLIAQEKMSTNHVYVFK++QPNK+AYVAEVRSMAES +RPPS+MFV M+SR
Sbjct: 192 YFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSR 251

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             AKG SSGQ IRATLPYIR +IPII+VFRALGFVADKDILEHICYDFQD++MM+LLRPS
Sbjct: 252 TSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPS 311

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QNQQVALDYIGKRG
Sbjct: 312 LEEAFVIQNQQVALDYIGKRG 332


>ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citrus clementina]
           gi|557525528|gb|ESR36834.1| hypothetical protein
           CICLE_v10027701mg [Citrus clementina]
          Length = 1195

 Score =  342 bits (878), Expect = 4e-92
 Identities = 168/201 (83%), Positives = 184/201 (91%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           VTK +I++GHD EEVT T++  KVFIGKVPIMLRS YCTL  NSEKDL ELGECPYDQGG
Sbjct: 132 VTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGG 191

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YFIINGSEKVLIAQEKMSTNHVYVFK++QPNK+AYVAEVRSMAES +RPPS+MFV M+SR
Sbjct: 192 YFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSR 251

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             AKG SSGQ IRATLPYIR +IPII+VFRALGFVADKDILEHICYDFQD++MM+LLRPS
Sbjct: 252 TSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPS 311

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QNQQVALDYIGKRG
Sbjct: 312 LEEAFVIQNQQVALDYIGKRG 332


>gb|AAZ08462.1| RNA polymerase II second largest subunit [Platanus orientalis]
          Length = 923

 Score =  342 bits (877), Expect = 5e-92
 Identities = 168/197 (85%), Positives = 181/197 (91%)
 Frame = -2

Query: 592 IIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGGYFII 413
           II++GHDCEEVT T+E  KVFIGKVPIMLRS YCTL  NSEKDL ELGECPYDQGGYFII
Sbjct: 1   IIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFII 60

Query: 412 NGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSRGKAK 233
           NGSEKVLIAQEKMSTNHVYVFK++QPNK+AYVAEVRSMAES +RPPSSMFV M+SR  AK
Sbjct: 61  NGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRASAK 120

Query: 232 GSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPSLEEA 53
           G SSGQ IRATLPYIR +IPII+VFRALGFVADKDILEHICYDF D++MM+LLRPSLEEA
Sbjct: 121 GGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFLDTQMMELLRPSLEEA 180

Query: 52  FVFQNQQVALDYIGKRG 2
           FV QNQQVALDYIGKRG
Sbjct: 181 FVIQNQQVALDYIGKRG 197


>gb|AAY89340.1| RNA polymerase II second largest subunit [Berberidopsis beckleri]
          Length = 873

 Score =  342 bits (877), Expect = 5e-92
 Identities = 166/201 (82%), Positives = 183/201 (91%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           VTK +I++GHDCEEVT T++  KVFIGKVPIMLRS YCT+  NSEKDL ELGECP+DQGG
Sbjct: 25  VTKRVIKKGHDCEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPFDQGG 84

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YFIINGSEKVLIAQEKMSTNHVYVFK++QPNK+AYV EVRSMAES +RPPSSMFV M+SR
Sbjct: 85  YFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMFVRMLSR 144

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             AKG SSGQ IRATLPYIR +IPII+VFRALGFVADKDILEHICYDF D++MM+LLRPS
Sbjct: 145 TSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPS 204

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QNQQVALDYIGKRG
Sbjct: 205 LEEAFVIQNQQVALDYIGKRG 225


>gb|AAY89339.1| RNA polymerase II second largest subunit [Berberidopsis corallina]
          Length = 853

 Score =  342 bits (877), Expect = 5e-92
 Identities = 166/201 (82%), Positives = 183/201 (91%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           VTK +I++GHDCEEVT T++  KVFIGKVPIMLRS YCT+  NSEKDL ELGECP+DQGG
Sbjct: 25  VTKRVIKKGHDCEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPFDQGG 84

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YFIINGSEKVLIAQEKMSTNHVYVFK++QPNK+AYV EVRSMAES +RPPSSMFV M+SR
Sbjct: 85  YFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMFVRMLSR 144

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             AKG SSGQ IRATLPYIR +IPII+VFRALGFVADKDILEHICYDF D++MM+LLRPS
Sbjct: 145 TSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPS 204

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QNQQVALDYIGKRG
Sbjct: 205 LEEAFVIQNQQVALDYIGKRG 225


>gb|AAY85190.1| RNA polymerase II second largest subunit [Aextoxicon punctatum]
          Length = 873

 Score =  342 bits (876), Expect = 6e-92
 Identities = 166/201 (82%), Positives = 183/201 (91%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           VTK +I++GHDCEEVT T++  KVFIGKVPIMLRS YCT+  NSEKDL ELGECP+DQGG
Sbjct: 25  VTKRVIKKGHDCEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPFDQGG 84

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YFIINGSEKVLIAQEKMSTNHVYVFK++QPNK+AYVAEVRSMAES +RPPSSMFV M+SR
Sbjct: 85  YFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSR 144

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             AKG SSGQ IRATLPYIR +IPII+VFRALGFVADKDILEHICYDF D++MM+LLRPS
Sbjct: 145 TSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPS 204

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QN QVALDYIGKRG
Sbjct: 205 LEEAFVIQNHQVALDYIGKRG 225


>gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 1193

 Score =  341 bits (874), Expect = 1e-91
 Identities = 167/201 (83%), Positives = 184/201 (91%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           VTK +I++GHD EEVT T++  KVFIGKVPIMLRS YCTL  NSEKDL ELGECPYDQGG
Sbjct: 130 VTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGG 189

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YFIINGSEKVLIAQEKMSTNHVYVFK++QPNK+AYVAEVRSMAES +RPPS+MFV M+SR
Sbjct: 190 YFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSR 249

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             +KG SSGQ IRATLPYIRA+IPII+VFRALGFVADKDILEHICYDF D++MM+LLRPS
Sbjct: 250 TSSKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPS 309

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QNQQVALDYIGKRG
Sbjct: 310 LEEAFVIQNQQVALDYIGKRG 330


>ref|XP_003561873.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like
           [Brachypodium distachyon]
          Length = 1228

 Score =  341 bits (874), Expect = 1e-91
 Identities = 167/201 (83%), Positives = 182/201 (90%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           V+  ++++GHDCEEVT T E PKVFIGKVPIMLRS YCTL   SEKDL ELGECPYDQGG
Sbjct: 169 VSYRVVKKGHDCEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGG 228

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YF+INGSEKVLIAQEKMSTNHVYVFK++QPNKFAYVAEVRSMAE+ +RP SSMFV M+SR
Sbjct: 229 YFVINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAENQNRPASSMFVRMLSR 288

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             AKG SSGQ IRATLPYIRADIPII+VFRALGFVADKDILEHICYDF D++MM+LLRPS
Sbjct: 289 AGAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPS 348

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QNQQVALDYIGKRG
Sbjct: 349 LEEAFVIQNQQVALDYIGKRG 369


>ref|XP_007025631.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma
           cacao] gi|508780997|gb|EOY28253.1| DNA-directed RNA
           polymerase family protein isoform 1 [Theobroma cacao]
          Length = 1189

 Score =  340 bits (873), Expect = 1e-91
 Identities = 167/201 (83%), Positives = 183/201 (91%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           VTK +I++GHD EEVT T++  KVFIGKVPIMLRS YCTL  NSEKDL ELGECPYDQGG
Sbjct: 129 VTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGG 188

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YFIINGSEKVLIAQEKMSTNHVYVFK++QPNK+AYVAEVRSMAES +RPPS+MFV M+SR
Sbjct: 189 YFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSR 248

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             AKG SSGQ IRATLPYIR +IPII+VFRALGFVADKDILEHICYDF D++MM+LLRPS
Sbjct: 249 TSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPS 308

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QNQQVALDYIGKRG
Sbjct: 309 LEEAFVIQNQQVALDYIGKRG 329


>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
           gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
           II subunit, putative [Ricinus communis]
          Length = 1194

 Score =  340 bits (873), Expect = 1e-91
 Identities = 167/201 (83%), Positives = 183/201 (91%)
 Frame = -2

Query: 604 VTKEIIQRGHDCEEVTGTEELPKVFIGKVPIMLRSKYCTLNGNSEKDLVELGECPYDQGG 425
           VTK +I++GHD EEVT T++  KVFIGKVPIMLRS YCTL  NSEKDL ELGECPYDQGG
Sbjct: 132 VTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGG 191

Query: 424 YFIINGSEKVLIAQEKMSTNHVYVFKRKQPNKFAYVAEVRSMAESHSRPPSSMFVGMVSR 245
           YFIINGSEKVLIAQEKMSTNHVYVFK++QPNK+AYVAEVRSMAES +RPPS+MFV M+SR
Sbjct: 192 YFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSR 251

Query: 244 GKAKGSSSGQCIRATLPYIRADIPIIVVFRALGFVADKDILEHICYDFQDSEMMDLLRPS 65
             AKG SSGQ IRATLPYIR +IPII+VFRALGFVADKDILEHICYDF D++MM+LLRPS
Sbjct: 252 TSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPS 311

Query: 64  LEEAFVFQNQQVALDYIGKRG 2
           LEEAFV QNQQVALDYIGKRG
Sbjct: 312 LEEAFVIQNQQVALDYIGKRG 332