BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00030410
         (1208 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   575   e-161
ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prun...   573   e-161
ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chl...   566   e-159
ref|XP_002304926.2| pseudouridine synthase family protein [Popul...   563   e-158
ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chl...   562   e-158
ref|XP_007026021.1| Pseudouridine synthase family protein [Theob...   562   e-157
ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   560   e-157
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr...   559   e-156
ref|XP_006449063.1| hypothetical protein CICLE_v10015055mg [Citr...   559   e-156
ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chlor...   559   e-156
ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chlor...   555   e-155
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl...   554   e-155
ref|XP_007147743.1| hypothetical protein PHAVU_006G151200g [Phas...   554   e-155
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...   553   e-155
ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chlor...   552   e-154
gb|EYU33906.1| hypothetical protein MIMGU_mgv1a005451mg [Mimulus...   551   e-154
ref|XP_006348096.1| PREDICTED: RNA pseudouridine synthase 6, chl...   551   e-154
ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chl...   551   e-154
ref|XP_006284907.1| hypothetical protein CARUB_v10006203mg [Caps...   541   e-151
ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [...   541   e-151

>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis vinifera]
            gi|302144082|emb|CBI23187.3| unnamed protein product
            [Vitis vinifera]
          Length = 472

 Score =  575 bits (1481), Expect = e-161
 Identities = 267/348 (76%), Positives = 303/348 (87%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LIHFGAVYYALVCP PP +AT EQ+++FKEVT P VLRKR SIKGKT REAQKTFRIT V
Sbjct: 124  LIHFGAVYYALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDV 183

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            +EFVEAGTYLRVH+HPKRFPRCYEIDWKSRIIAVTESYV+LDKPAGTSVGGTTDNIEESC
Sbjct: 184  NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 243

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATFATRALGLT PL TTHQIDNCTEGCVV ARTK+YCSVFHGKIRE            AP
Sbjct: 244  ATFATRALGLTTPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRALAAAP 303

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            +PIG+VTHYMRPVN+APRL+S+D  +GW++CQLEVLECKEVPWP+   E+K CI++ GWP
Sbjct: 304  MPIGIVTHYMRPVNIAPRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGWP 363

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             K+ A++CKINLLTG+THQ+RAQLAA GAPIVGDSMY+P+ IAE  +PGLNPFG+  K Y
Sbjct: 364  LKNSAFKCKINLLTGRTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKYKKKY 423

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGEHFYEARTPWW 163
             +E++R  AV EW+AQHGKEP +AIGLQACQISWDDGEHFY+A +PWW
Sbjct: 424  TTENDRETAVAEWIAQHGKEPGVAIGLQACQISWDDGEHFYKAGSPWW 471


>ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
            gi|462409392|gb|EMJ14726.1| hypothetical protein
            PRUPE_ppa020640mg [Prunus persica]
          Length = 477

 Score =  573 bits (1476), Expect = e-161
 Identities = 260/349 (74%), Positives = 300/349 (85%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LIHFGAVYYALVCP PP TAT EQ+++FKEVT P VL+ R SIKGKT REAQKTFRIT  
Sbjct: 127  LIHFGAVYYALVCPKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFRITHA 186

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            DEFVEAGTYLRVH+HPKRFPRCY+IDWKSRIIAV+E +V+LDKPAGT+VGGTTDNIEESC
Sbjct: 187  DEFVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNIEESC 246

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATFATRALGLT PL TTHQIDNCTEGCVV ARTK+YCSVFHGKIRE            AP
Sbjct: 247  ATFATRALGLTTPLNTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAP 306

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            VP G++THYMRP+NVAPRL+S+D  + W +CQLEV+ECKE+PWP A  E+K C+++CGWP
Sbjct: 307  VPTGIITHYMRPINVAPRLISEDFIERWSLCQLEVMECKEIPWPNAVVEEKYCVEDCGWP 366

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             KD AYECKINLLTG+THQVRAQLAA GAPIVGDSMY+P+ +AE  +PGLNPFG+  KHY
Sbjct: 367  SKDYAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAVAEMESPGLNPFGQYKKHY 426

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGEHFYEARTPWWR 160
             +E+++  AV EW+A+HGKEP++AIGLQACQISWDDG+H +EAR PWWR
Sbjct: 427  TTENDKETAVAEWIARHGKEPNVAIGLQACQISWDDGKHTFEARAPWWR 475


>ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Glycine max]
          Length = 478

 Score =  567 bits (1460), Expect = e-159
 Identities = 255/349 (73%), Positives = 294/349 (84%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LI FGAVYYALVCP PP  AT EQI++FKEVT+P VLRKR SIKGKT REAQKTFR+T V
Sbjct: 129  LIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHV 188

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            D+FVE GTYLRVH+HPKRFPR YEIDW+SRIIAV ESYV+LDKPAGTSVGGTTDNIEESC
Sbjct: 189  DQFVEPGTYLRVHVHPKRFPRSYEIDWRSRIIAVAESYVVLDKPAGTSVGGTTDNIEESC 248

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATFATRALG+T PL TTHQIDNCTEGCVV ARTK YCS+FHGKIRE            +P
Sbjct: 249  ATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKDYCSIFHGKIREKKVKKLYLALAASP 308

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            +P G++THYMRP+N+APRL+S+D  +GWH+CQLEVLEC+++PWPT + + K C+++CGWP
Sbjct: 309  LPTGIITHYMRPINMAPRLISEDFIKGWHLCQLEVLECRKIPWPTTAIQDKYCVEDCGWP 368

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             +D AYECKINLLTGKTHQ+RAQ AA  AP++GDSMY+P+ IA+  NPGLNPFG+  K +
Sbjct: 369  SQDYAYECKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIADVSNPGLNPFGKYKKDF 428

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGEHFYEARTPWWR 160
             SE E+  AV  WMAQHGKEPS+AIGLQACQISWDD EHFYEA  PWWR
Sbjct: 429  SSESEKETAVVNWMAQHGKEPSVAIGLQACQISWDDDEHFYEAGLPWWR 477


>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
            gi|550340110|gb|EEE85437.2| pseudouridine synthase family
            protein [Populus trichocarpa]
          Length = 470

 Score =  563 bits (1451), Expect = e-158
 Identities = 257/349 (73%), Positives = 299/349 (85%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LIHFGAV+YALVCP PP+TAT EQI++F+EVT P VL+KR SIKGKT REAQKTFRIT V
Sbjct: 118  LIHFGAVHYALVCPQPPRTATPEQIRVFEEVTAPSVLKKRASIKGKTVREAQKTFRITHV 177

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            D+F+EAG YLRVH+HPKRFPRCY+IDWKSRII VTES+V+LDKPAGTSVGGTTDNIEESC
Sbjct: 178  DQFLEAGMYLRVHVHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAGTSVGGTTDNIEESC 237

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATFATRALGLT PL TTHQIDNCTEGCVV ART++ CSVFHGKIRE            +P
Sbjct: 238  ATFATRALGLTAPLRTTHQIDNCTEGCVVLARTREDCSVFHGKIREKTVKKLYIALAASP 297

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            VPIGVV HYMRP+N+APRLVS++  +GWH+CQLEV+ECK VPWP A  E+K C+ +CGWP
Sbjct: 298  VPIGVVNHYMRPINMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDAVMEEKYCVQDCGWP 357

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             KD AYECKINLLTG+THQ+RAQLAA+GAP+VGDSMY+P+ +AE ++PG NPFG+  K Y
Sbjct: 358  SKDHAYECKINLLTGRTHQIRAQLAALGAPLVGDSMYMPAAVAEMVSPGCNPFGKYKKQY 417

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGEHFYEARTPWWR 160
             SED++  AVEEW+  HGKEP++AIGLQACQISWDDG+H Y A +PWWR
Sbjct: 418  TSEDDKAIAVEEWVLCHGKEPNVAIGLQACQISWDDGKHIYNAGSPWWR 466


>ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Glycine max]
          Length = 478

 Score =  562 bits (1449), Expect = e-158
 Identities = 254/349 (72%), Positives = 292/349 (83%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LI FGAVYYALVCP PP  AT EQI++FKEVT+P VLRKR SIKGKT REAQKTFR+T V
Sbjct: 129  LIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHV 188

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            D+FVE GTYLRVH+HPKR PRCYEIDW+SRII V ESYV+LDKPAGTSVGGTTDNIEESC
Sbjct: 189  DQFVEPGTYLRVHVHPKRSPRCYEIDWRSRIITVAESYVVLDKPAGTSVGGTTDNIEESC 248

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATFATRALG+T PL TTHQIDNCTEGCVV ARTK+YCSVFHGKIRE             P
Sbjct: 249  ATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKFYLALAAFP 308

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            +P G++THYMRP+++APRL+S+D  +GWH+CQLEVLEC++VPWP  + + K CI++CGWP
Sbjct: 309  LPTGIITHYMRPIDMAPRLISEDFIKGWHLCQLEVLECRKVPWPATAIQDKYCIEDCGWP 368

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             +D AYECKINLLTGKTHQ+RAQ AA  AP++GDSMY+P+ IA   NPGLNPFG+  K +
Sbjct: 369  SQDYAYECKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIANMSNPGLNPFGKYKKDF 428

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGEHFYEARTPWWR 160
             SE E+  AV  W+AQHGKEPS+AIGLQACQISWDD EHFYEA +PWWR
Sbjct: 429  SSESEKETAVVNWIAQHGKEPSVAIGLQACQISWDDDEHFYEASSPWWR 477


>ref|XP_007026021.1| Pseudouridine synthase family protein [Theobroma cacao]
            gi|508781387|gb|EOY28643.1| Pseudouridine synthase family
            protein [Theobroma cacao]
          Length = 491

 Score =  562 bits (1448), Expect = e-157
 Identities = 263/349 (75%), Positives = 299/349 (85%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LIHFGAVYYALVCP PP +AT EQI+IFKEVT P VL KR SI+GKT REAQKTFRIT V
Sbjct: 140  LIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIRGKTVREAQKTFRITHV 199

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            D+FVEAGTYLRVH+HPKRFPRCYEIDWKSRIIAVT+SYV+LDKPAGTSVGGTTDNIEESC
Sbjct: 200  DQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTDNIEESC 259

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATFA RALG + PL TTHQIDNCTEGCVV ARTK+YCSVFHGKIRE            AP
Sbjct: 260  ATFANRALGFSTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALTAAP 319

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            +PIGV+THYMRP+N+APRLVS+D  +GW++CQLEV+ECK+VPWP    ++  CI++ GWP
Sbjct: 320  LPIGVITHYMRPINMAPRLVSEDFIKGWYLCQLEVMECKKVPWPDYVIQENYCIEDSGWP 379

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             KD AYECKINLLTG+THQVRAQLAA GAPI+GDSMY+P  IAE  NPGLNPFG+  KH 
Sbjct: 380  LKDHAYECKINLLTGRTHQVRAQLAACGAPILGDSMYMPPTIAEIANPGLNPFGKYKKH- 438

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGEHFYEARTPWWR 160
             SE+++  A+ EW++Q GKEPS+AIGLQACQISWDDGEHFY+AR+PWWR
Sbjct: 439  TSENDKEIAITEWISQFGKEPSVAIGLQACQISWDDGEHFYKARSPWWR 487


>ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
            chloroplastic-like [Cucumis sativus]
          Length = 475

 Score =  560 bits (1444), Expect = e-157
 Identities = 257/349 (73%), Positives = 294/349 (84%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LIHFGAVYYALVCP PP+TAT EQI++FK  T+P  L+ RKSIKGKT REAQKTFRIT V
Sbjct: 123  LIHFGAVYYALVCPQPPKTATPEQIRLFKNXTEPSFLKGRKSIKGKTVREAQKTFRITHV 182

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            DEFVE GTYLRVH+HPKRFPRCYEIDWKSRIIAVTESYV+LDKPAGTSVGGTTDNIEESC
Sbjct: 183  DEFVEVGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 242

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATFATRALGLT PLWTTHQIDNCTEGCV+FARTK+YCS+FHGKIRE            AP
Sbjct: 243  ATFATRALGLTSPLWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAP 302

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            VP+G++THYMRP+N+APRLVSKD   GW +CQLEVLEC+EV WP A TE K  +++CGWP
Sbjct: 303  VPMGIITHYMRPINIAPRLVSKDCIDGWIICQLEVLECREVSWPDADTEAKYRVEDCGWP 362

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             K  AYEC+INLLTG+THQ+RAQLA  GAP+VGDSMY+P+V+AE  +PGLNPFG+  K Y
Sbjct: 363  SKKKAYECRINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEY 422

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGEHFYEARTPWWR 160
             +E+++  +V EW A HGKEP++AIGLQA +ISWD  EH Y A TPWWR
Sbjct: 423  TNEEDKETSVAEWSALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWR 471


>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
            gi|557551677|gb|ESR62306.1| hypothetical protein
            CICLE_v10015055mg [Citrus clementina]
          Length = 487

 Score =  559 bits (1440), Expect = e-156
 Identities = 256/349 (73%), Positives = 299/349 (85%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LIHFGAVYYALVCP PP TAT EQ+++FKEVTDP VL KR SIKGKT REAQKTFRIT V
Sbjct: 130  LIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHV 189

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            D+ VEAGTYLRVH+HPKRFPRCY+IDWKSRIIAVTES+V+LDKPAGTSVGGTTDNIEESC
Sbjct: 190  DQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNIEESC 249

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATFA+RALGLT PL TTHQIDNCTEGCVV ART++YCS+FH KIRE            AP
Sbjct: 250  ATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTAAP 309

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            +P+G++THYMRP+N+APRL+S+D  +GW++CQLEV+ECK+VPWP A+  +   I++CGWP
Sbjct: 310  LPVGIMTHYMRPINIAPRLISEDFIKGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWP 369

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             +D AYECKI LLTG+THQVRAQLAA GAPIVGDSMY+P+ IA+  +PGLNPFG+  K Y
Sbjct: 370  SRDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQKEY 429

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGEHFYEARTPWWR 160
             S+D++  AV EW++QHGKEPS+AIGLQAC ISWDDGE  YEAR+PWWR
Sbjct: 430  ASDDDKEMAVIEWISQHGKEPSVAIGLQACHISWDDGECCYEARSPWWR 478


>ref|XP_006449063.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
            gi|557551674|gb|ESR62303.1| hypothetical protein
            CICLE_v10015055mg [Citrus clementina]
          Length = 392

 Score =  559 bits (1440), Expect = e-156
 Identities = 256/349 (73%), Positives = 299/349 (85%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LIHFGAVYYALVCP PP TAT EQ+++FKEVTDP VL KR SIKGKT REAQKTFRIT V
Sbjct: 35   LIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHV 94

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            D+ VEAGTYLRVH+HPKRFPRCY+IDWKSRIIAVTES+V+LDKPAGTSVGGTTDNIEESC
Sbjct: 95   DQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNIEESC 154

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATFA+RALGLT PL TTHQIDNCTEGCVV ART++YCS+FH KIRE            AP
Sbjct: 155  ATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTAAP 214

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            +P+G++THYMRP+N+APRL+S+D  +GW++CQLEV+ECK+VPWP A+  +   I++CGWP
Sbjct: 215  LPVGIMTHYMRPINIAPRLISEDFIKGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWP 274

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             +D AYECKI LLTG+THQVRAQLAA GAPIVGDSMY+P+ IA+  +PGLNPFG+  K Y
Sbjct: 275  SRDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQKEY 334

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGEHFYEARTPWWR 160
             S+D++  AV EW++QHGKEPS+AIGLQAC ISWDDGE  YEAR+PWWR
Sbjct: 335  ASDDDKEMAVIEWISQHGKEPSVAIGLQACHISWDDGECCYEARSPWWR 383


>ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
            sativus]
          Length = 475

 Score =  559 bits (1440), Expect = e-156
 Identities = 257/349 (73%), Positives = 294/349 (84%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LIHFGAVYYALVCP PP+TAT EQI++FK+ T+P  L+ RKSIKGKT REAQKTFRIT V
Sbjct: 123  LIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHV 182

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            DEFVE GTYLRVH+HPKRFPRCYEIDWKSRIIAVTESYV+LDKPAGTSVGGTTDNIEESC
Sbjct: 183  DEFVEVGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 242

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATFATRALGLT PLWTTHQIDNCTEGCV+FARTK+YCS+FHGKIRE            AP
Sbjct: 243  ATFATRALGLTSPLWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAP 302

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            VP+G++THYMRP+N+APRLVSKD   GW +CQLEVLEC+EV WP A  E K  +++CGWP
Sbjct: 303  VPMGIITHYMRPINIAPRLVSKDCIDGWIICQLEVLECREVSWPDADIEAKYRVEDCGWP 362

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             K  AYEC+INLLTG+THQ+RAQLA  GAP+VGDSMY+P+V+AE  +PGLNPFG+  K Y
Sbjct: 363  SKKKAYECRINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEY 422

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGEHFYEARTPWWR 160
             +E+++  AV EW A HGKEP++AIGLQA +ISWD  EH Y A TPWWR
Sbjct: 423  TNEEDKETAVAEWSALHGKEPAVAIGLQAYEISWDSREHSYNAGTPWWR 471


>ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Fragaria
            vesca subsp. vesca]
          Length = 477

 Score =  555 bits (1429), Expect = e-155
 Identities = 252/349 (72%), Positives = 293/349 (83%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LIHFGAVYYALVCP PP TAT EQ++++KEVT P VL+KR SIKGKT REAQKTFRIT  
Sbjct: 127  LIHFGAVYYALVCPKPPPTATPEQMRVYKEVTAPSVLKKRDSIKGKTVREAQKTFRITHA 186

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            D++VE GTYLRVH+HPKRFPRCY+IDWKSR+IAVTE +V+LDKPAGT+VGGTTDNIEESC
Sbjct: 187  DQYVEDGTYLRVHVHPKRFPRCYDIDWKSRVIAVTEDFVVLDKPAGTTVGGTTDNIEESC 246

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATF +RALGL+ PL TTHQIDNCTEGCVV ARTK YCSVFHGKIRE            AP
Sbjct: 247  ATFTSRALGLSTPLMTTHQIDNCTEGCVVLARTKDYCSVFHGKIREKKVKKLYLALAAAP 306

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            VP+G +THYMRP+NVAPRL+S+D  + W +CQLEV+ECK+VPWP++  E++  +++CGWP
Sbjct: 307  VPLGTITHYMRPINVAPRLISEDSIERWSLCQLEVMECKKVPWPSSVIEEEYGVEDCGWP 366

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             KD AYECKINLLTGKTHQ+RAQLAA G P+VGDSMY+P+ IAE  NP LNPFG+  KHY
Sbjct: 367  SKDYAYECKINLLTGKTHQIRAQLAACGTPLVGDSMYMPAAIAEMENPELNPFGKHKKHY 426

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGEHFYEARTPWWR 160
              E++   AV EWMA+HGKEP +AIGLQACQISWDDGEH +EAR PWWR
Sbjct: 427  AGENDEEIAVTEWMARHGKEPIVAIGLQACQISWDDGEHSFEARAPWWR 475


>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Citrus sinensis] gi|568827302|ref|XP_006468003.1|
            PREDICTED: RNA pseudouridine synthase 6,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 487

 Score =  554 bits (1428), Expect = e-155
 Identities = 255/349 (73%), Positives = 296/349 (84%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LIHFGAVYYALVCP PP TAT EQ+++FKEVTDP VL KR SIKGKT REAQKTFRIT V
Sbjct: 130  LIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHV 189

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            D+ VEAGTYLRVH+HPKRFPRCY+IDW SRIIAVTES+V+LDKPAGTSVGGTTDNIEESC
Sbjct: 190  DQIVEAGTYLRVHVHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDNIEESC 249

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATFA+RALGLT PL TTHQIDNCTEGCVV ART++YCS+FH KIRE            AP
Sbjct: 250  ATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTTAP 309

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            +P+G++THYMRP+N+APRLVS+D   GW++CQLEV+ECK+VPWP A+  +   I++CGWP
Sbjct: 310  LPVGIMTHYMRPINIAPRLVSEDFITGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWP 369

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             +D AYECKI LLTG+THQVRAQLAA GAPIVGDSMY+P+ IA+  +PGLNPFG+  K Y
Sbjct: 370  SRDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQKEY 429

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGEHFYEARTPWWR 160
             S+D++  AV EW++QHG EPS+AIGLQAC ISWDDGE  YEAR+PWWR
Sbjct: 430  ASDDDKEMAVIEWISQHGMEPSVAIGLQACHISWDDGECCYEARSPWWR 478


>ref|XP_007147743.1| hypothetical protein PHAVU_006G151200g [Phaseolus vulgaris]
            gi|561020966|gb|ESW19737.1| hypothetical protein
            PHAVU_006G151200g [Phaseolus vulgaris]
          Length = 478

 Score =  554 bits (1428), Expect = e-155
 Identities = 249/349 (71%), Positives = 293/349 (83%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LI FGAVYYALVCP PP +AT EQI++FKEVT+P VLR+R SIKGKT REAQKTFR+T  
Sbjct: 129  LIQFGAVYYALVCPQPPPSATEEQIRVFKEVTEPSVLRQRASIKGKTVREAQKTFRVTHA 188

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            D+FVE GTYLRVH+HPKRFPRCYEIDW+SRII+V ESYV+LDKPAGTSVGGTTDNIEESC
Sbjct: 189  DQFVEPGTYLRVHVHPKRFPRCYEIDWRSRIISVAESYVVLDKPAGTSVGGTTDNIEESC 248

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATFATRALGLT PL TTHQIDNCTEGCVV ARTK+YCSVFHGKIRE            +P
Sbjct: 249  ATFATRALGLTAPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALASSP 308

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            +P G++THYMRP+N+APRL+S+D  +GW MCQLE+ EC++VPWPT S + K C+++CGWP
Sbjct: 309  LPTGIITHYMRPINMAPRLISEDFIKGWLMCQLEIQECRKVPWPTPSIQDKYCVEDCGWP 368

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             +D AYECKINLLTG+THQ+RAQ AA  AP+VGDSMY+P+ I +  NPGLNPFG+  + +
Sbjct: 369  YQDFAYECKINLLTGRTHQIRAQFAACRAPLVGDSMYMPAAIGDMSNPGLNPFGKYKRDF 428

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGEHFYEARTPWWR 160
             SE E+  AV  W+AQHGKEP +AIGLQACQISWDD +HFYE+ +PWWR
Sbjct: 429  SSESEKETAVVNWIAQHGKEPGVAIGLQACQISWDDDDHFYESGSPWWR 477


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 476

 Score =  553 bits (1426), Expect = e-155
 Identities = 249/349 (71%), Positives = 297/349 (85%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LI FGAV+YALVCP PP TAT EQI++F++ T P VL+KR SIKGKT REAQKTFRIT V
Sbjct: 124  LIDFGAVHYALVCPRPPTTATPEQIRLFEKFTAPSVLKKRSSIKGKTVREAQKTFRITHV 183

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            D+++EAGTYLRVH+HPKRFPRCY+IDWKSRIIAVT+ YV+LDKPAGTSVGGT DNIEESC
Sbjct: 184  DQYLEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDCYVVLDKPAGTSVGGTADNIEESC 243

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATFATRALGLT PL TTHQIDNCTEGCVV AR+K+YCSVFHGKIRE            +P
Sbjct: 244  ATFATRALGLTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAASP 303

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            VP+GV+ +YMRPVN+APRL+S++   GWH+CQLEVLEC++VPWP A+ E+K  +++CGWP
Sbjct: 304  VPVGVIKNYMRPVNIAPRLLSEEFVNGWHLCQLEVLECRKVPWPDAAIEEKYSVEDCGWP 363

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             KD AYECKINLLTG+THQ+RAQLAA GAP+VGDSMY+P+ +AE  NPGLNPFG+  K Y
Sbjct: 364  SKDFAYECKINLLTGRTHQIRAQLAASGAPLVGDSMYMPAAVAEMANPGLNPFGKHRKQY 423

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGEHFYEARTPWWR 160
             +E + + AV EW+AQHGKEP +AIGLQAC+ISWD+G+H Y+A +PWWR
Sbjct: 424  TNESDESMAVAEWVAQHGKEPKVAIGLQACEISWDEGKHIYKAGSPWWR 472


>ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Solanum
            lycopersicum]
          Length = 448

 Score =  552 bits (1422), Expect = e-154
 Identities = 251/349 (71%), Positives = 299/349 (85%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LI FGAVYYALVCP PP TA+ EQIK+++EVTDP VLRKR SIKGKT REAQKTF+ITR 
Sbjct: 100  LIQFGAVYYALVCPKPPPTASPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFKITRA 159

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            DE VEAGTYLRVH+HPKRFPRCY+IDWKSRIIAVT+ YV+LDKPAGTSVGGTTDNIEESC
Sbjct: 160  DEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESC 219

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATFATRALG + PL TTHQIDNCTEGCVV AR+K+YCSVFHGKIRE            AP
Sbjct: 220  ATFATRALGFSAPLLTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVRKLYLALAAAP 279

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            VPIG++THYMRP+N+APRLVS+D  +GW +CQLEVLEC++VPWP++  ++   +++CGW 
Sbjct: 280  VPIGILTHYMRPINMAPRLVSRDFVKGWLLCQLEVLECQKVPWPSSEIQRTYNLEDCGWA 339

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             KD AYEC+INLLTG+THQ+RAQLAA  AP+VGDSMY+P+ IAE + PG NPFG++ K Y
Sbjct: 340  LKDYAYECQINLLTGRTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCPGSNPFGKNKKLY 399

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGEHFYEARTPWWR 160
             +E++++ A++EW+AQHGKEPS+A+GLQACQISWDDG+H Y AR PWWR
Sbjct: 400  SNENDKSLAIDEWIAQHGKEPSVAVGLQACQISWDDGQHCYGARMPWWR 448


>gb|EYU33906.1| hypothetical protein MIMGU_mgv1a005451mg [Mimulus guttatus]
          Length = 483

 Score =  551 bits (1421), Expect = e-154
 Identities = 255/351 (72%), Positives = 291/351 (82%), Gaps = 2/351 (0%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LIHFGAV+YALVCP PP TAT EQI  FKE TDP +LRKR SIKGKTFREAQKTFRI+R 
Sbjct: 133  LIHFGAVFYALVCPDPPPTATPEQINFFKEYTDPSLLRKRSSIKGKTFREAQKTFRISRT 192

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            DEFVE GTYLRVH+HPKRFPRCYE DW+SR+IAV ESYV+LDKPAGTSVGGTTDNIEESC
Sbjct: 193  DEFVETGTYLRVHVHPKRFPRCYETDWRSRVIAVAESYVVLDKPAGTSVGGTTDNIEESC 252

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
             TF TRALGL  PL TTHQIDNCTEGCVV ARTK+YCSVFHGKIRE            AP
Sbjct: 253  VTFTTRALGLEAPLITTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAP 312

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            V IGV+THYMRPVN+APRLVS+D+  GWH+CQLEVLEC+++PWP++  E+K  +++CGWP
Sbjct: 313  VSIGVITHYMRPVNIAPRLVSEDLVNGWHLCQLEVLECRKIPWPSSIAEEKNRVEDCGWP 372

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             KD AYECK+NLLTG+THQ+RAQ AA GAP+VGDSMY+P+ IAE   P LNPFG++ K Y
Sbjct: 373  SKDFAYECKVNLLTGRTHQIRAQFAACGAPLVGDSMYMPAAIAEVDRPELNPFGKNKKEY 432

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGE--HFYEARTPWWR 160
             S+D +  AVEEW+A+HGKEP +AIGLQAC+ISWD  E  H YEA  PWWR
Sbjct: 433  ASDDIKAVAVEEWIARHGKEPIVAIGLQACKISWDSDEEQHSYEAGRPWWR 483


>ref|XP_006348096.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X3 [Solanum tuberosum]
          Length = 440

 Score =  551 bits (1420), Expect = e-154
 Identities = 250/349 (71%), Positives = 299/349 (85%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LI FGAVYYALVCP PP TA+ EQIK+++EVTDP +LR+R SIKGKT REAQKTF+ITR 
Sbjct: 92   LIQFGAVYYALVCPKPPPTASPEQIKVYEEVTDPSILRQRTSIKGKTVREAQKTFKITRA 151

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            DE VEAGTYLRVH+HPKRFPRCY+IDWKSRIIAVT+ YV+LDKPAGTSVGGTTDNIEESC
Sbjct: 152  DEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESC 211

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATFATRALG + PL TTHQIDNCTEGCVV AR+K+YCSVFHGKIRE            AP
Sbjct: 212  ATFATRALGFSAPLLTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAAAP 271

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            VPIG++THYMRP+N+APRLVS+D  +GW +CQLEVLECK+VPWP++  ++   +++CGW 
Sbjct: 272  VPIGILTHYMRPINMAPRLVSEDFVKGWLLCQLEVLECKKVPWPSSEIQRTYNLEDCGWA 331

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             KD AYEC+INLLTG+THQ+RAQLAA  AP+VGDSMY+P+ IAE + PG NPFG++ K Y
Sbjct: 332  LKDFAYECQINLLTGRTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCPGSNPFGKNKKLY 391

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGEHFYEARTPWWR 160
             +E++++ A++EW+AQHGKEPS+A+GLQACQISWDDG+H Y AR PWWR
Sbjct: 392  SNENDKSLAIDEWIAQHGKEPSVAVGLQACQISWDDGQHCYGARLPWWR 440


>ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Solanum tuberosum] gi|565362724|ref|XP_006348095.1|
            PREDICTED: RNA pseudouridine synthase 6,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 483

 Score =  551 bits (1420), Expect = e-154
 Identities = 250/349 (71%), Positives = 299/349 (85%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LI FGAVYYALVCP PP TA+ EQIK+++EVTDP +LR+R SIKGKT REAQKTF+ITR 
Sbjct: 135  LIQFGAVYYALVCPKPPPTASPEQIKVYEEVTDPSILRQRTSIKGKTVREAQKTFKITRA 194

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            DE VEAGTYLRVH+HPKRFPRCY+IDWKSRIIAVT+ YV+LDKPAGTSVGGTTDNIEESC
Sbjct: 195  DEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESC 254

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATFATRALG + PL TTHQIDNCTEGCVV AR+K+YCSVFHGKIRE            AP
Sbjct: 255  ATFATRALGFSAPLLTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAAAP 314

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            VPIG++THYMRP+N+APRLVS+D  +GW +CQLEVLECK+VPWP++  ++   +++CGW 
Sbjct: 315  VPIGILTHYMRPINMAPRLVSEDFVKGWLLCQLEVLECKKVPWPSSEIQRTYNLEDCGWA 374

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             KD AYEC+INLLTG+THQ+RAQLAA  AP+VGDSMY+P+ IAE + PG NPFG++ K Y
Sbjct: 375  LKDFAYECQINLLTGRTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCPGSNPFGKNKKLY 434

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGEHFYEARTPWWR 160
             +E++++ A++EW+AQHGKEPS+A+GLQACQISWDDG+H Y AR PWWR
Sbjct: 435  SNENDKSLAIDEWIAQHGKEPSVAVGLQACQISWDDGQHCYGARLPWWR 483


>ref|XP_006284907.1| hypothetical protein CARUB_v10006203mg [Capsella rubella]
            gi|482553612|gb|EOA17805.1| hypothetical protein
            CARUB_v10006203mg [Capsella rubella]
          Length = 479

 Score =  541 bits (1393), Expect = e-151
 Identities = 252/352 (71%), Positives = 294/352 (83%), Gaps = 3/352 (0%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LI FGAV+YALVCP PP TAT E+IK+F+EVT P VL+KR SIKGKT REAQKTFR+T  
Sbjct: 128  LIRFGAVHYALVCPKPPPTATPEEIKLFEEVTSPSVLKKRSSIKGKTVREAQKTFRVTHT 187

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
            D++ EAGTYLRVH+HPKR PRCYEIDWKSRIIAVT+SYVILDKPAGT+VGGTTDNIEESC
Sbjct: 188  DQYAEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVTDSYVILDKPAGTTVGGTTDNIEESC 247

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATFA+RAL L +PL TTHQIDNCTEGCVVFARTK+YCSVFH KIR+            AP
Sbjct: 248  ATFASRALDLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHMKIRDKEVKKLYRALAAAP 307

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            +P G+++HYMRP N+APRLVS+D  +GWH+CQLEVLECK++PWP A TE+K  I++CGW 
Sbjct: 308  LPTGIISHYMRPKNMAPRLVSEDSIKGWHLCQLEVLECKKIPWPNAGTEKKHDIEDCGWT 367

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             K+ AYEC INLLTGKTHQ+RAQLAA GAP+VGDSMY+P+ IAE MNP +NP+G+  KHY
Sbjct: 368  SKEFAYECTINLLTGKTHQIRAQLAAYGAPLVGDSMYMPAAIAEMMNPEINPYGKAKKHY 427

Query: 306  E-SEDERTKAVEEWMAQHGKEPSIAIGLQACQISW--DDGEHFYEARTPWWR 160
               E+++  AV EW+ +HGKEP + IGLQACQISW  DDGEHFYEA TPWWR
Sbjct: 428  TMEENDKETAVAEWIDRHGKEPRVGIGLQACQISWDDDDGEHFYEAGTPWWR 479


>ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542359|gb|EEF43901.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 395

 Score =  541 bits (1393), Expect = e-151
 Identities = 245/349 (70%), Positives = 290/349 (83%)
 Frame = -3

Query: 1206 LIHFGAVYYALVCPTPPQTATTEQIKIFKEVTDPDVLRKRKSIKGKTFREAQKTFRITRV 1027
            LIHFGAV+YALVCP PP TAT EQI++F+E T P VL+KR SIKGKT REAQKTFR++ V
Sbjct: 47   LIHFGAVHYALVCPQPPPTATPEQIRLFEEFTAPSVLKKRASIKGKTVREAQKTFRVSSV 106

Query: 1026 DEFVEAGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEESC 847
             +F+E GTYLRV++HP+RFPRCYEIDWKSRIIAVTESYV+LDKPAGTSVGGTT+NIEE+C
Sbjct: 107  HQFLEVGTYLRVYVHPRRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTNNIEETC 166

Query: 846  ATFATRALGLTDPLWTTHQIDNCTEGCVVFARTKQYCSVFHGKIREXXXXXXXXXXXXAP 667
            ATFATRALGLT PL TTHQIDNCTEGCVV ART +YC VFHGKIRE             P
Sbjct: 167  ATFATRALGLTIPLKTTHQIDNCTEGCVVLARTNEYCPVFHGKIRENKVKKLYLALAACP 226

Query: 666  VPIGVVTHYMRPVNVAPRLVSKDITQGWHMCQLEVLECKEVPWPTASTEQKLCIDNCGWP 487
            VP+GV+THYMRP N+ PRLVS++  +GW++CQLEVLEC++VPWP   TE+K  +++CGWP
Sbjct: 227  VPVGVITHYMRPGNIPPRLVSEEFIEGWYLCQLEVLECRKVPWPDTVTEEKYSVEDCGWP 286

Query: 486  KKDVAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYIPSVIAEAMNPGLNPFGEDGKHY 307
             KD AYECKINLLTG+THQ+RAQLAA GAP+VGDSMY+P+ IAE  NPG+NPFG+  K Y
Sbjct: 287  SKDFAYECKINLLTGRTHQIRAQLAACGAPLVGDSMYMPAAIAEMANPGVNPFGKHKKQY 346

Query: 306  ESEDERTKAVEEWMAQHGKEPSIAIGLQACQISWDDGEHFYEARTPWWR 160
              E++ +  V EW+ +HGKEPSIAIGLQAC+ISW D +H Y+A  PWWR
Sbjct: 347  TGENDESMGVAEWVERHGKEPSIAIGLQACEISWGDSKHIYKAGPPWWR 395