BLASTX nr result

ID: Papaver25_contig00030395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00030395
         (841 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007012064.1| RNA polymerase I-associated factor PAF67 iso...    44   7e-06
gb|EXB82275.1| hypothetical protein L484_007265 [Morus notabilis]      45   9e-06

>ref|XP_007012064.1| RNA polymerase I-associated factor PAF67 isoform 2, partial
           [Theobroma cacao] gi|508782427|gb|EOY29683.1| RNA
           polymerase I-associated factor PAF67 isoform 2, partial
           [Theobroma cacao]
          Length = 497

 Score = 43.9 bits (102), Expect(2) = 7e-06
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = +3

Query: 438 LSTKLFMDDVNLKNFIRSLKLPEGGYSTISIGKLASCMEFDEPTLRLVI 584
           L  KLF+ +V  +  +  ++     YSTIS+GKLA+ ME DEPTLR ++
Sbjct: 406 LQLKLFLYEVKQQQLLSGVRTFLKVYSTISLGKLANYMEVDEPTLRTIL 454



 Score = 33.1 bits (74), Expect(2) = 7e-06
 Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = +2

Query: 668 MTYKHNIHVVVNK-EIISYADVGFHIEDVVNDILQILL 778
           +TYKH  H V +  +IIS ADV F+I+D  + +LQ ++
Sbjct: 455 LTYKHKTHAVDSDGKIISNADVDFYIDDSHSTLLQDMI 492


>gb|EXB82275.1| hypothetical protein L484_007265 [Morus notabilis]
          Length = 551

 Score = 45.1 bits (105), Expect(2) = 9e-06
 Identities = 23/49 (46%), Positives = 32/49 (65%)
 Frame = +3

Query: 438 LSTKLFMDDVNLKNFIRSLKLPEGGYSTISIGKLASCMEFDEPTLRLVI 584
           L  KLF+ +V  +  +  ++     YSTIS+GKLAS ME DEPTLR ++
Sbjct: 417 LQLKLFLYEVKQQQLLSGVRTFLKVYSTISLGKLASYMEVDEPTLRTIL 465



 Score = 31.6 bits (70), Expect(2) = 9e-06
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +2

Query: 668 MTYKHNIHVVVNK-EIISYADVGFHIED 748
           MTYKH  H V +  +IIS ADV F+I+D
Sbjct: 466 MTYKHKTHAVDSDGKIISNADVDFYIDD 493


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