BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00030154
         (1972 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                104   1e-42
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]    88   3e-34
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]    80   2e-28
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    86   2e-28
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]    82   2e-27
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               82   2e-25
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ...    80   2e-25
emb|CBI31290.3| unnamed protein product [Vitis vinifera]               75   2e-23
emb|CAN65855.1| hypothetical protein VITISV_013124 [Vitis vinifera]    71   4e-23
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]    77   7e-23
gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subc...    72   1e-22
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...    75   2e-22
gb|EEC80484.1| hypothetical protein OsI_22718 [Oryza sativa Indi...    71   6e-22
ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266...    66   5e-21
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]                 76   1e-20
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal...    66   3e-20
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha...    66   3e-20
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]                     66   4e-20
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc...    75   5e-20
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...    76   6e-19

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  104 bits (260), Expect(2) = 1e-42
 Identities = 79/316 (25%), Positives = 132/316 (41%), Gaps = 21/316 (6%)
 Frame = +3

Query: 426  MENPTASSFSKVPLYQITTFVHLKLKENNYYI*RNLMNHVIQRYKLKRFVDGTYPCPVQY 605
            + NP   +   + +  +   V  KL   NY   R+L   V++R+KL   V+G   CP  +
Sbjct: 254  LSNPPIMTLGTISITNVAGMVPTKLNRQNYITWRSLFIPVLKRFKLIGLVNGEDLCPPPF 313

Query: 606  TSPRNEANGIENLNYTDWLEEDSTIIMWINSTISDSFITYFSRSTSSHQLWRRIEEPFAR 785
                +    + N ++  W E D  +++WINST+S   +        S  LW+ +E  F+ 
Sbjct: 314  VRDPS-GTCVPNASFETWCERDQILMIWINSTLSKDLLPLTIGMEDSRSLWQSLERRFSG 372

Query: 786  AKSTHFIQLRTKLLSLNQGDKSXXXXXXXK*NFS*PIGGCW*NCV*YKELVVITLKALNS 965
            A  TH   LR+K+ ++++GD S           S  +       +   +LV   L  L  
Sbjct: 373  ASRTHVHSLRSKIQTIHKGDSSMTDFLNSIKEISNKLAAAG-EPLSESDLVAYILSGLPD 431

Query: 966  NYITFVMSMRHKNPPITSIELHNNLLSEESAVSGRLKNTKPEMDAKSFLDNNNFRCSFRG 1145
             Y +FV S+  +N  +T+ ELH  LLS+E ++  R        +A  F        +  G
Sbjct: 432  EYESFVDSIETRNESVTADELHGLLLSKEISLQKRKTRASSSSNA-PFHAYAAQSSTHVG 490

Query: 1146 SFSRGYYRGTYSNGGRHPNPPIF---------------------ARTTYGRGNATSDKIP 1262
             F++G  RG + N  R+     F                     +R   G  +++   + 
Sbjct: 491  HFNKGNSRGRFHNRNRYTQNRNFGGNKPHNWHANNSGGILGAGPSRQPAGPSSSSGCSVQ 550

Query: 1263 CQIC*SDTHLAPNSNQ 1310
            CQ+C    H AP  N+
Sbjct: 551  CQLCLQYGHWAPMCNR 566



 Score = 97.8 bits (242), Expect(2) = 1e-42
 Identities = 63/189 (33%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
 Frame = +1

Query: 1402 WIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GMSVTYT*HSSRTFNDHFFFLK*Y 1581
            W+ DSGA+ H+  D S L   IPY G + +   +G G+ +++T  S+     H  F    
Sbjct: 591  WLTDSGASHHVTPDPSALNSAIPYSGNDQLFVGDGKGLCISHT-GSALIRTKHATFRLND 649

Query: 1582 SSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQTSRNILFQGPHKNGFYPINFQSS 1761
                 QAS N+LS +KF  DN   LT D  G  VKD ++  +LFQGP + G YP  + +S
Sbjct: 650  VLLVPQASHNLLSVYKFVYDNWCYLTFDPFGFYVKDLSTGKMLFQGPSEGGLYPFYWNAS 709

Query: 1762 HHTYSSTISDNAFL---------HKRFCHPTFQTLQKI--RRILNLFNVSNKPSCCNECK 1908
            +      IS  A +         H+R  HP+  TL  +  +  L +    N  S C  C+
Sbjct: 710  NGVSGIAISPTALMIAKADIHTWHRRLGHPSGGTLHSVVHKNHLPVIGYVNNMSVCTACQ 769

Query: 1909 LCRS*KLPF 1935
            L +S +L F
Sbjct: 770  LGKSYRLSF 778


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score = 87.8 bits (216), Expect(2) = 3e-34
 Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
 Frame = +1

Query: 1351 HQISVIIAVAEIFKKDE-WIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GMSVTY 1527
            + I  ++A A     DE W +DSGA+ H+  +   L    PY GT+ +   NG  +S++ 
Sbjct: 327  NNIPAMVASASNNPADESWYLDSGASHHLTQNLGNLTSTSPYTGTDKVTIGNGKHLSISN 386

Query: 1528 T*HSSRTFNDHFFFLK*YSSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQTSRNI 1707
                    + H F LK         S N++S  KF S+NN  +   S+   VKD  ++ +
Sbjct: 387  IGSKQLHSHTHSFRLK-KVFHVPFISANLISVAKFCSENNALIEFHSNAFFVKDLHTKMV 445

Query: 1708 LFQGPHKNGFYPI-------------NFQSSHHTYSSTISDNAFL-HKRFCHPTFQTLQK 1845
            L QG  +NG Y               N  + H  +SST+ + A L H R  H +F  + K
Sbjct: 446  LAQGKLENGLYKFPVFSNLKPYSSINNASAFHSQFSSTVENKAELWHNRLGHASFDIVSK 505

Query: 1846 IRRILNLFNVSNKPSCCNECKLCRS*KLPFQI 1941
            +    N+ +   K   C++C+L +S +LP Q+
Sbjct: 506  VMNTCNVASGKYKSFVCSDCQLAKSHRLPTQL 537



 Score = 87.0 bits (214), Expect(2) = 3e-34
 Identities = 84/329 (25%), Positives = 143/329 (43%), Gaps = 16/329 (4%)
 Frame = +3

Query: 402  QEFGSSS*MENPTASSFSKVPLYQITTF-VHLKLKENNYYI*RNLMNHVIQRYKLKRFVD 578
            Q   SS  + +  +S+ + +P YQ+    + +KL   NY + R+ +++VI     + F+D
Sbjct: 7    QSSSSSGSIGSGQSSTMASIPSYQMLNHTLPVKLDRTNYILWRSQIDNVIFANGFEDFID 66

Query: 579  GTYPCPVQYTSPRNEANGIENLNYTDWLEEDSTIIMWINSTISDSFITYFSRSTSSHQLW 758
            GT  CP +  SP     G+ N  +  W  +D TI+ WI S+++   +       +SH  W
Sbjct: 67   GTSICPEKDLSP-----GVMNPAFVAWRRQDRTILSWIYSSLTPGIMAQIIGHNTSHSAW 121

Query: 759  RRIEEPFARAKSTHFIQLRTKLLSLNQGDKSXXXXXXXK*NFS*PIGGCW*NC------V 920
              +E  F+ +     +QLR +L S  +G  S         ++   I G   N       V
Sbjct: 122  NALESIFSSSSRARIMQLRLELQSTKKGSMSMI-------DYIMKIKGAADNLAAIGEPV 174

Query: 921  *YKELVVITLKALNSNYITFVMSMRHKNPPITSIELHNNLLSEESAVSGRLKNTKPEMDA 1100
              ++ V+  L  L S+Y   V ++  ++  I+   +H+ LL+ E  +  +    +   + 
Sbjct: 175  SEQDQVMNLLGGLGSDYNAVVTAINIRDDKISLEAIHSMLLAFEHRLEQQSSIEQMSANY 234

Query: 1101 KSFLDNNNFRCSFRGSFSRGY--------YRGTYSNGGRHPNPPIFARTTYGRGNAT-SD 1253
             S  +N      F G   +GY        YRG    GGR+           GR N++ S+
Sbjct: 235  ASSSNNRGGGRKFNGGRGQGYSPNNNNYTYRGR-GRGGRNGQG--------GRQNSSPSE 285

Query: 1254 KIPCQIC*SDTHLAPNSNQRLIFFCSYKG 1340
            K  CQ+C    H A     R  F  S++G
Sbjct: 286  KPQCQLCGKFGHTAQICYHR--FDISFQG 312


>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score = 79.7 bits (195), Expect(2) = 2e-28
 Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 12/201 (5%)
 Frame = +1

Query: 1366 IIAVAEIFKKDEWIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GMSVTYT*HSSR 1545
            ++A +     D W +DSGA+ H+  + + L    PY G + +   NG  ++++ T  +  
Sbjct: 330  MVAXSNNXADDNWYLDSGASHHLTQNVANLTNATPYTGADKVTIGNGKHLTISNTXFTRL 389

Query: 1546 TFNDHFFFLK*YSSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQTSRNILFQGPH 1725
              N H F LK         S N++S  KF SDNN  +   S+G  +KD  ++ +L QG  
Sbjct: 390  FSNPHSFQLK-KVFHVPFISANLISVAKFCSDNNALIEFHSNGFFLKDLHTKRVLAQGKL 448

Query: 1726 KNGFYPINFQSSHHT-YSSTISDNAF-----------LHKRFCHPTFQTLQKIRRILNLF 1869
            +NG Y     S+  T Y    +D+ F            H R  H     + +I    N+ 
Sbjct: 449  ENGLYKFPVISNKKTAYVGITNDSTFQCSNIENKRELWHHRLGHAATDIVTRIMHNCNVS 508

Query: 1870 NVSNKPSCCNECKLCRS*KLP 1932
                K + C+ C+L +S +LP
Sbjct: 509  CGKYKATVCSSCQLAKSHRLP 529



 Score = 75.5 bits (184), Expect(2) = 2e-28
 Identities = 74/302 (24%), Positives = 128/302 (42%), Gaps = 15/302 (4%)
 Frame = +3

Query: 414  SSS*MENPTASSFSKVPLYQITTF-VHLKLKENNYYI*RNLMNHVIQRYKLKRFVDGTYP 590
            SSS   +  +SS + +P YQ+  + + +KL   NY + R+ +++VI     + F+DGT  
Sbjct: 8    SSSSSGSAQSSSMASIPSYQMLNYSLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSV 67

Query: 591  CPVQYTSPRNEANGIENLNYTDWLEEDSTIIMWINSTISDSFITYFSRSTSSHQLWRRIE 770
            CP +   P     G  N  +     +D TI+ WI S+++   +       SSH  W  +E
Sbjct: 68   CPEKELRP-----GEINPAFVAXRRQDRTILSWIYSSLTPGIMAQIIGHNSSHSAWNALE 122

Query: 771  EPFARAKSTHFIQLRTKLLSLNQGDKSXXXXXXXK*NFS*PIGGCW*NCV*YKELVVITL 950
            + F+       +QL  +  S  +G  S           +  +       V  ++ ++  L
Sbjct: 123  KIFSSCSRARIMQLXLEFQSTKKGSMSMIDYIMKVKGAADSLAAIG-EPVSEQDQIMNLL 181

Query: 951  KALNSNYITFVMSMRHKNPPITSIELHNNLLSEESAV--SGRLKNTKPEMDAKSFLDNNN 1124
              L S+Y   V ++  +   I+   +H+ LL+ E  +   G ++   P M A     +NN
Sbjct: 182  GGLGSDYNAVVTAINIREDKISLEAVHSMLLAFEQRLEQQGSIEQL-PAMSANYASXSNN 240

Query: 1125 FRCSFRGSFSRGYYRGTYSNGGRHPNPPIFARTTYGRG------------NATSDKIPCQ 1268
                 RG        G   NGGR PN  +      GRG            +++S++  CQ
Sbjct: 241  -----RGG-------GRKYNGGRGPNFMMTNSNFRGRGRGXRYGQSGRQNSSSSERPQCQ 288

Query: 1269 IC 1274
            +C
Sbjct: 289  LC 290


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 85.5 bits (210), Expect(2) = 2e-28
 Identities = 63/193 (32%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
 Frame = +1

Query: 1387 FKKDEWIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GMSVTYT*HSSRTFNDHFF 1566
            F    W +DSGAN HI +DA+ L    P+  +E +   NG G+ V  T  ++  F    F
Sbjct: 316  FDHQVWYMDSGANAHITSDATNLTHQQPFCESETVTVGNGSGLQVLNTGSTTFNFGQSNF 375

Query: 1567 FLK*YSSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQTSRNILFQGPHKNGFYPI 1746
             L        QA+ N++S ++F  DNN    L ++G  VK+  +  IL QG  +NG YP+
Sbjct: 376  HLN-KILHCPQAATNLISINQFCLDNNCYFILTANGFVVKENLTGRILLQGVVENGLYPL 434

Query: 1747 ----NFQSSHHTYSSTISDNA---FLHKRFCHPT---FQTLQKIRRILNLFNVSNKPSCC 1896
                 F  S    S+TI   A     H R  HP+   F +L    + L++   S K   C
Sbjct: 435  AGCKTFHKSLTCLSTTIGVRANADTWHSRLGHPSSVIFNSLFHSNK-LSVKGSSTKLEFC 493

Query: 1897 NECKLCRS*KLPF 1935
            + C+L ++ +LPF
Sbjct: 494  SACQLGKAKQLPF 506



 Score = 69.7 bits (169), Expect(2) = 2e-28
 Identities = 78/325 (24%), Positives = 135/325 (41%), Gaps = 14/325 (4%)
 Frame = +3

Query: 426  MENPTASSFSKVPLYQITTFVHLKLK-ENNYYI*RNLMNHVIQRYKLKRFVDGTYPCPVQ 602
            M N   +S     L   TT + +KL   +NY   +    ++++ + L  F+DGT  CP  
Sbjct: 1    MANTNDTSIPVSILPPSTTIISVKLDGSHNYLAWKMQFLNLLRGHDLMGFIDGTEACP-- 58

Query: 603  YTSPRNEANGIENLNYTDWLEEDSTIIMWINSTISDSFITYFSRSTSSHQLWRRIEEPFA 782
               P++ A+G  N  Y  W ++D  ++ WI +++S+  ++      +S Q+W  ++  F+
Sbjct: 59   ---PKHTASGSLNPAYVVWQKKDVCLLGWILASLSEKLVSTIYGLETSKQVWTALQTRFS 115

Query: 783  RAKSTHFIQLRTKLLSLNQGDKSXXXXXXXK*NFS*PIGGCW*NCV*YKELVVITLKALN 962
                +    L+ +L +L QG KS           +  +       V  ++L+   L  L 
Sbjct: 116  SQSRSRISHLKRQLQTLTQGTKSCSEYLESAKTLADQLAAAG-KPVDDQDLISFLLGGLQ 174

Query: 963  SNYITFVMSMR--HKNPPITSIELHNNLLSEESAVSGRLKNTKPEMDAKSFLDNNNFRCS 1136
            S+Y  FV S     +    T  +    LL  E+ +   + ++    D   F        +
Sbjct: 175  SSYTPFVTSFNFASRETDFTFEDFQAELLGYENLLD--VNHSVHNTDGPHF--------A 224

Query: 1137 FRGSFSRGYYRGTYSNGGRHPNPPI----FARTTY--GRGNATSDKIP-----CQIC*SD 1283
            F  + S+     TY      P PP      A + Y   +  +T  ++P     CQIC   
Sbjct: 225  FAANKSKA---PTYVQKKGPPLPPTKMQNAASSNYRSQQTRSTPSQLPNNRPVCQICGKS 281

Query: 1284 THLAPNSNQRLIFFCSYKGRGPPSN 1358
             H A +   R  F  SY+GR PP +
Sbjct: 282  GHTAIDCFHR--FDYSYQGRFPPQD 304


>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score = 81.6 bits (200), Expect(2) = 2e-27
 Identities = 75/302 (24%), Positives = 129/302 (42%), Gaps = 15/302 (4%)
 Frame = +3

Query: 414  SSS*MENPTASSFSKVPLYQITTF-VHLKLKENNYYI*RNLMNHVIQRYKLKRFVDGTYP 590
            SSS   +  +SS + +P YQ+  + + +KL   NY + R+ +++VI     + F+DGT  
Sbjct: 8    SSSSSGSAQSSSMASIPSYQMLNYSLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSX 67

Query: 591  CPVQYTSPRNEANGIENLNYTDWLEEDSTIIMWINSTISDSFITYFSRSTSSHQLWRRIE 770
            CP +   P        N  +  W  +D TI+ WI S+++   +       SSH  W  +E
Sbjct: 68   CPEKELRPXEI-----NPAFVAWRRQDRTILSWIYSSLTPGIMAQIIGHNSSHSAWNALE 122

Query: 771  EPFARAKSTHFIQLRTKLLSLNQGDKSXXXXXXXK*NFS*PIGGCW*NCV*YKELVVITL 950
            + F+       +QLR +  S  +G  S           +  +       V  ++ ++  L
Sbjct: 123  KIFSSCSRARIMQLRLEFQSTKKGSMSMIDYIMKVKGAADSLAAIG-EPVSEQDQIMNLL 181

Query: 951  KALNSNYITFVMSMRHKNPPITSIELHNNLLSEESAV--SGRLKNTKPEMDAKSFLDNNN 1124
              L S+Y   V ++  +   I+   +H+ LL+ E  +   G ++   P M A     +NN
Sbjct: 182  GGLGSDYNAVVTAINIREDKISLEAVHSMLLAFEQRLEQQGSIEQL-PAMSANYASSSNN 240

Query: 1125 FRCSFRGSFSRGYYRGTYSNGGRHPNPPIFARTTYGRG------------NATSDKIPCQ 1268
                 RG        G   NGGR PN  +      GRG            +++S++  CQ
Sbjct: 241  -----RGG-------GRKYNGGRGPNFMMTNSNFRGRGRGGRYGQSGRQNSSSSERPQCQ 288

Query: 1269 IC 1274
            +C
Sbjct: 289  LC 290



 Score = 70.1 bits (170), Expect(2) = 2e-27
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
 Frame = +1

Query: 1351 HQISVIIAVAEIFKKDEWIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GMSVTYT 1530
            + +  ++A +     D W +DSGA+ H+  + + L    PY G + +   NG  ++++ T
Sbjct: 325  NSMPAMVASSNNLADDNWYLDSGASHHLTQNVANLTNATPYTGADKVTIGNGKHLTISNT 384

Query: 1531 *HSSRTFNDHFFFLK*YSSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQTSRNIL 1710
              +    N H F LK         S N++S  KF SDNN  +   S+G  VKD  ++ +L
Sbjct: 385  GFTRLFSNPHSFQLK-KVFHVPFISANLISVAKFCSDNNALIEFHSNGFFVKDLHTKRVL 443

Query: 1711 FQGPHKNGFYPINFQSSHHT-YSSTISDNAF 1800
             QG  +NG Y     S+  T Y    +D+ F
Sbjct: 444  AQGKLENGLYKFPVISNRKTAYVGITNDSTF 474


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 82.4 bits (202), Expect(2) = 2e-25
 Identities = 87/334 (26%), Positives = 133/334 (39%), Gaps = 29/334 (8%)
 Frame = +3

Query: 441  ASSFSKVPLYQITTFVHLKLKENNYYI*RNLMNHVIQRYKLKRFVDGTYPCPVQYTSPR- 617
            ASS S      ++ F+ +KL   NY +    +  +++  KL  FVDGT  CP  +   + 
Sbjct: 2    ASSSSTENTPSVSNFLTIKLDRTNYPLWLAQITPILKSRKLWGFVDGTNLCPPCFLKDKA 61

Query: 618  NEANGIENLNYTDWLEEDSTIIMWINSTISDSFITYFSRSTSSHQLWRRIEEPFARAKST 797
             +     N ++  W+ +D  ++ WIN +++   ++  +RSTS H  W  +   FA     
Sbjct: 62   GQLTDQVNPDFEPWILQDQMVLSWINGSLTPKVLSTVARSTSLHATWTALATRFASQSQH 121

Query: 798  HFIQLRTKLLSLNQGDKSXXXXXXXK*NFS*PIGGCW*NCV*YKELVVITLKALNSNYIT 977
              +QLR  LL   +G  S         + +  +     + V   +LV I +  +   Y T
Sbjct: 122  RVLQLRADLLRTTRGTMSISDYLDKLNSIADNLALAG-SPVPDADLVNIVMTNVGPLYET 180

Query: 978  FVMSMRHKNPPITSIELHNNLLSEESAVSGRLKNTKPE-----MDAKSFLDNNNFRCSFR 1142
             V S + ++ PIT   L   LLS E  VS        E        +S     N   S R
Sbjct: 181  TVSSAQARDSPITYEALEVLLLSAERRVSEYAHPAAAEGIHALHATQSRGRGRNSFISGR 240

Query: 1143 GSFSRG--YYRGTYSNGGRHP---------------------NPPIFARTTYGRGNATSD 1253
            G  +RG  Y  G  ++G  H                       P     T+ G     + 
Sbjct: 241  GGSNRGGSYSHGITNSGSAHSRGRGTFSHSRGSSGSRRSSILGPAPGTTTSNGNSFFNTG 300

Query: 1254 KIPCQIC*SDTHLAPNSNQRLIFFCSYKGRGPPS 1355
            +I CQIC    H A +   RL    SY+GR P S
Sbjct: 301  RIQCQICSRPGHSAIDCFNRLNL--SYEGRVPSS 332



 Score = 62.8 bits (151), Expect(2) = 2e-25
 Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 9/193 (4%)
 Frame = +1

Query: 1393 KDEWIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*-GMSVTYT*HSSRTFNDHFFF 1569
            ++ W+ D+GAN+H+  +   +     Y G + +   N   G+S+ +   S    +   F 
Sbjct: 345  EETWLTDTGANSHVTPNLGNIDSPKSYKGLDNLGGINSDSGLSIKHIGSSKLNSSSSSFH 404

Query: 1570 LK*YSSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQTSRNILFQGPHKNGFYPIN 1749
            L       S AS N+LS +KFT DN+       +   VKD  +  +L+ G  +NG YP  
Sbjct: 405  LNDILHCPS-ASTNLLSVYKFTIDNHCYFIFYPNYFCVKDLKTGKMLYHGKSENGLYPFR 463

Query: 1750 FQSSHHTYSSTIS------DNAFLHKRFCHPTFQTLQKI--RRILNLFNVSNKPSCCNEC 1905
            F S     SS+++           H R  H +   + K+   + + +   SN  S C  C
Sbjct: 464  FPSKTSKVSSSLAYVSSRVSAETWHSRLGHASSTIVSKVLSNKAVPVLGSSNF-SFCQSC 522

Query: 1906 KLCRS*KLPFQIF 1944
             L +S +    IF
Sbjct: 523  PLGKSGEYKSHIF 535


>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
          Length = 646

 Score = 80.5 bits (197), Expect(2) = 2e-25
 Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
 Frame = +1

Query: 1366 IIAVAEIFKKDEWIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GMSVTYT*HSSR 1545
            ++A   +  +  W +D+GA  H+ +D + L    P+ G + +   NG G+ V +T HSS 
Sbjct: 355  LMAAPGLLGETPWFLDTGATHHVTSDLANLSLHNPFSGDDKVIVGNGKGLYVLHTGHSSI 414

Query: 1546 TFNDHFFFLK*YSSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQTSRNILFQGPH 1725
              +     LK       + + N++S  K   DNN  +       +VKDQ ++ IL +G  
Sbjct: 415  PTSQGALLLK-NVLHVPKIAANLVSVQKLCHDNNAYVEFYPSYFAVKDQKTQAILLKGGL 473

Query: 1726 KNGFYPINFQSSHH-----------TYSSTISDNAFL-HKRFCHPTFQTLQKIRRILNL- 1866
              G Y +    S H           T SST  D+  L H R  HP+   + K+    NL 
Sbjct: 474  DKGLYSVPSAYSSHAPQARVFQIFSTSSSTSIDSMRLWHNRLGHPSLAIVNKVLNHYNLP 533

Query: 1867 -FNVSNKPSCCNECKLCRS*KLPF 1935
             F++ NK   C+ C+L +S KLPF
Sbjct: 534  VFSLQNK-LLCDSCQLAKSHKLPF 556



 Score = 64.3 bits (155), Expect(2) = 2e-25
 Identities = 70/319 (21%), Positives = 133/319 (41%), Gaps = 14/319 (4%)
 Frame = +3

Query: 381  ISDLFMIQEFGS---SS*MENPTASSFSKVPLYQITTFVHLKLKENNYYI*RNLMNHVIQ 551
            ++ L   Q  GS   ++ M   T    S +P +  T  + +KL  NN+ I RN + +++ 
Sbjct: 9    VTPLMETQNLGSEHSANTMATQTTGINSNLPTFGQT--LTIKLDRNNFLIWRNQLLNIVV 66

Query: 552  RYKLKRFVDGTYPCPVQY-----TSPRNEANGIENLNYTDWLEEDSTIIMWINSTISDSF 716
                +  ++GT  CP Q+     T+     + I N  Y  W  ++  ++ WI S++++  
Sbjct: 67   ANGYEDILEGTRSCPYQWIAVTDTASTTHGSVILNPEYVLWQRQNRLVMSWIYSSLTEQM 126

Query: 717  ITYFSRSTSSHQLWRRIEEPFARAKSTHFIQLRTKLLSLNQGDKSXXXXXXXK*NFS*PI 896
            +T      S+ ++W  + E +A A     ++LR +L +  +G  S         +    +
Sbjct: 127  MTQIMAYNSACEIWTALRESYASASRARIMELRLQLQTTRKGGLSVMDYMLRIQHICDHL 186

Query: 897  GGCW*NCV*YKELVVITLKALNSNYITFVMSMRHKNPPITSIELHNNLLSEES--AVSGR 1070
                   V   + V+  L  L S Y   V S+  +   I+   L + L + E    +   
Sbjct: 187  RAIG-ESVSIDDQVMAVLAGLGSEYNPIVASITSRLDSISVQALQSYLETYEKRLEIQNS 245

Query: 1071 LKNTKP-EMDAKSFLDNNNFRCSFRGSF--SRGYYRGTYSNGGRHPNPPIFARTTYGRGN 1241
            ++   P + +A  +  N   R  ++ +F  S+     T++   R+ +   F      +G 
Sbjct: 246  VEQHIPLQANAAMYNSNRGKRKPYQQNFHHSQTPVTATHNFNHRNSSQGGFRGGHSNKGR 305

Query: 1242 ATSDKIP-CQIC*SDTHLA 1295
            A     P CQIC    H+A
Sbjct: 306  ANPGSRPQCQICCKIGHVA 324


>emb|CBI31290.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score = 74.7 bits (182), Expect(2) = 2e-23
 Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 11/189 (5%)
 Frame = +1

Query: 1396 DEWIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GMSVTYT*HSSRTFNDHFFFLK 1575
            D W +DS A  H++  A+ +    PY+GT+ +   NG  + +T   HS    +   F L 
Sbjct: 444  DSWFLDSSATHHLSHTAANIHNGTPYNGTDSVMVDNGKSLPITQVGHSFLHTSAKPFVLH 503

Query: 1576 *YSSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQTSRNILFQGPHKNGFYPINFQ 1755
                +  Q + N++S  KF +DNN  +        VKD+ ++  L QG  + G Y     
Sbjct: 504  -NVLYVPQLTSNLISVSKFCTDNNTIMEFHPSSFFVKDKDTKVTLLQGQLERGLYKFP-T 561

Query: 1756 SSHHTYSSTISDNAFL----------HKRFCHPTFQTLQKIRRILNLFNVSNKP-SCCNE 1902
            SS  + ++++    FL          H++F HP+   LQKI    N+ + SNK     N 
Sbjct: 562  SSISSPTASLKHQVFLTKTQPTTMLWHQQFGHPSAVILQKIFHTCNISHNSNKTVDVYNA 621

Query: 1903 CKLCRS*KL 1929
            C   +S KL
Sbjct: 622  CCCAKSHKL 630



 Score = 63.5 bits (153), Expect(2) = 2e-23
 Identities = 61/299 (20%), Positives = 126/299 (42%), Gaps = 10/299 (3%)
 Frame = +3

Query: 492  LKLKENNYYI*RNLMNHVIQRYKLKRFVDGTYPCPVQYTSPRNEANGIENLNYTDWLEED 671
            +KL  +N+ +    M +VI     +  ++G  PCP     P+  + G  N ++  W   D
Sbjct: 131  IKLDRDNHILWHTQMENVIYANGFEDHIEGLRPCP-----PKTISTGEVNPDFLVWRRYD 185

Query: 672  STIIMWINSTISDSFITYFSRSTSSHQLWRRIEEPFARAKSTHFIQLRTKLLSLNQGDKS 851
              I+ WI S+++   +       +SH+ W  ++  F+ +     +QLR    +  +G  +
Sbjct: 186  RMILSWIYSSLTPDVMGQIVGLQTSHEAWTALQRSFSASTKARTMQLRLAFQTNKKGSLT 245

Query: 852  XXXXXXXK*NFS*PIGGCW*NCV*YKELVVITLKALNSNYITFVMSMRHKNPPITSIELH 1031
                     + S  +       V  K+ ++  L  L + Y   + S+  ++  I    +H
Sbjct: 246  MMEYIQKLKHISDSLAAIG-EPVPEKDQILQLLSGLGAEYNPIIASLTTRDDDIQLHAVH 304

Query: 1032 NNLLSEESAVSGRLKNTKPEMDAKSFLDNNNFRCSFRGSFSRGYYRGTYSNGGRHPNPPI 1211
            + LL+ E  +  +   T+ ++   +F  +N  R S     S+G    ++    R P+  +
Sbjct: 305  SILLTHEQRLPLQTTPTEEDLLIANFATHNRPRRSQSKKPSQGKPPQSFMPTIR-PDTLL 363

Query: 1212 FARTTYGRG----------NATSDKIPCQIC*SDTHLAPNSNQRLIFFCSYKGRGPPSN 1358
             +R  Y +G          + T+++  CQ+C    H+  +   R  F  +Y+G   P++
Sbjct: 364  DSRQQYPQGYRPNRFNNNRSRTNNRPQCQLCGKFGHMVLSCYHR--FDVNYQGPRAPAS 420


>emb|CAN65855.1| hypothetical protein VITISV_013124 [Vitis vinifera]
          Length = 456

 Score = 70.9 bits (172), Expect(2) = 4e-23
 Identities = 72/306 (23%), Positives = 129/306 (42%), Gaps = 17/306 (5%)
 Frame = +3

Query: 486  VHLKLKENNYYI*RNLMNHVIQRYKLKRFVDGTYPCPVQYTSPRNEANGIENLNYTDWLE 665
            + +KL   N+      +  +   Y L   VDG+ P P QY S       + N  Y  W  
Sbjct: 18   ISIKLDGTNFLAWSAQLIPLFXSYGLIXIVDGSNPRPPQYFSDELXDQXVLNSAYVIWQY 77

Query: 666  EDSTIIMWINSTISDSFITYFSRSTSSHQLWRRIEEPFARAKSTHFIQLRTKLLSLNQGD 845
            +D T++ WI S++S S ++      +S   W+ +   FA   ++    ++ KL SL QG 
Sbjct: 78   KDQTVLGWIVSSLSPSIVSTIYGLETSRLAWQALNLRFAAPSTSRISLIKRKLQSLQQGS 137

Query: 846  KSXXXXXXXK*NFS*PIGGCW*NCV*YKELVVITLKALNSNYITFV-----------MSM 992
             S         + S  +       V   +L++  L  LNS++ +FV           M  
Sbjct: 138  MSCQSFLDEVKSLSNELSIVG-KPVEDSDLILXVLNGLNSSFHSFVTTYILLANEKSMHF 196

Query: 993  RHKNPPITSIEL----HNNLLSEESAVSGRLKNTKPEMDAKSFLDNNNFRCSFRGSFSRG 1160
             + +  + + +L    HN+ +  E   +G       +  +K    +NN   S  GS    
Sbjct: 197  SYFHAKLLNYDLMQKFHNHTIQPE---TGSYALYSHKNSSKLGARSNNINRS--GSSGTS 251

Query: 1161 YYRGTY--SNGGRHPNPPIFARTTYGRGNATSDKIPCQIC*SDTHLAPNSNQRLIFFCSY 1334
             + G+   S+  R P P + + ++    + +  + PCQIC  + H A +   R+ +  ++
Sbjct: 252  KFPGSIPSSSPFRQPLPHLPSSSSPPVSHDSRSRSPCQICKRENHQALDCYNRMNY--AF 309

Query: 1335 KGRGPP 1352
            +GR PP
Sbjct: 310  QGRHPP 315



 Score = 66.2 bits (160), Expect(2) = 4e-23
 Identities = 50/174 (28%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
 Frame = +1

Query: 1348 HHQISVIIAVAEI----FKKDEWIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GM 1515
            H  I ++  V E       + +W VDSGAN H+ +D   L    PY+GT+ +   NG   
Sbjct: 313  HPPIELVAMVVEANTTYLNQHQWYVDSGANIHVTSDTVNLAISQPYEGTDTVGVGNG--- 369

Query: 1516 SVTYT*HSSRTFNDHFFFLK*YSSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQT 1695
                                        AS ++LS +KF  +NN    L     SVKD  
Sbjct: 370  ---------------------------AASAHLLSINKFYKNNNVLFELTGSDFSVKDLK 402

Query: 1696 SRNILFQGPHKNGFYPINFQ----SSHHTYSSTI---SDNAFLHKRFCHPTFQT 1836
            +   L  G    G YPIN Q    S  H +S T+   +  A  H R   P+  T
Sbjct: 403  TGETLMMGSSDRGLYPINLQQLSSSKFHVFSMTVGVKASTAIWHCRLRLPSLST 456


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score = 77.4 bits (189), Expect(2) = 7e-23
 Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 12/216 (5%)
 Frame = +1

Query: 1336 KVEVHHQISVIIAVAEIFKKDEWIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GM 1515
            K    +Q+  ++A       + W  D+GA  H++     L +  PY G + +   NG  +
Sbjct: 356  KPNAKNQVQAMMASPSTISDEAWFFDTGATHHLSQSIDPLSDVQPYMGNDKVIVGNGKHL 415

Query: 1516 SVTYT*HSSRTFNDHFFFLK*YSSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQT 1695
             + +T  +    +   F L+        A+ N++S  +F +DNN           VKDQ 
Sbjct: 416  RILHTGTTFFPSSSKTFQLRQVLHVPDIAT-NLISVSQFCADNNTFFEFHPRFFFVKDQV 474

Query: 1696 SRNILFQGPHKNGFY---------PINFQSSHHTYSSTIS---DNAFLHKRFCHPTFQTL 1839
            ++ IL QG  ++G Y         P  F SS +  SS +S        H R  HP    L
Sbjct: 475  TKKILLQGSLEHGLYRFPARFVPSPAAFVSSSYDRSSNLSLTTTTTLWHSRLGHPADNIL 534

Query: 1840 QKIRRILNLFNVSNKPSCCNECKLCRS*KLPFQIFI 1947
            + I    N+ +  +K + C  C+  +S KLPF + +
Sbjct: 535  KHILTSCNISHQCHKNNVCCACQFAKSHKLPFNVXV 570



 Score = 58.9 bits (141), Expect(2) = 7e-23
 Identities = 71/323 (21%), Positives = 126/323 (39%), Gaps = 1/323 (0%)
 Frame = +3

Query: 384  SDLFMIQEFGSSS*MENPTASSFSKVPLYQITTF-VHLKLKENNYYI*RNLMNHVIQRYK 560
            S LFM+    SS        SS       Q+    + +KL  NNY + R  M +V+    
Sbjct: 62   SILFMMSSTQSSGLQAGTLPSSTGATQTMQMLNHALPIKLDRNNYILWRTQMENVVFANG 121

Query: 561  LKRFVDGTYPCPVQYTSPRNEANGIENLNYTDWLEEDSTIIMWINSTISDSFITYFSRST 740
             +  ++G   CP Q TS     +G  N ++  W   D  I+ WI S+++   +       
Sbjct: 122  FEDHIEGLKICPPQKTS-----SGETNPDFVMWRRFDRMILSWIYSSLTPEIMGQIVGYQ 176

Query: 741  SSHQLWRRIEEPFARAKSTHFIQLRTKLLSLNQGDKSXXXXXXXK*NFS*PIGGCW*NCV 920
            SSH  W  +E  F  +     +QLR +  +  +G  +         + +  +       V
Sbjct: 177  SSHAXWFALEXXFXASSRARVMQLRLEFQTTRKGSLTMMEYILKLKSLADNLAAIG-EPV 235

Query: 921  *YKELVVITLKALNSNYITFVMSMRHKNPPITSIELHNNLLSEESAVSGRLKNTKPEMDA 1100
              ++ ++  L  L ++Y + V S       +T+ E  +N ++E++ +S  L   +     
Sbjct: 236  TDRDQILQLLGGLGADYNSIVAS-------LTAREDEDNSVAEDNVISANLATPQ----- 283

Query: 1101 KSFLDNNNFRCSFRGSFSRGYYRGTYSNGGRHPNPPIFARTTYGRGNATSDKIPCQIC*S 1280
              +   NN R S +   S G+     +NG              GR  ++  +  CQ+C  
Sbjct: 284  --YQHFNNKRSSGQNRQS-GFNTRRGTNG--------------GRSQSSQHRPQCQLCGK 326

Query: 1281 DTHLAPNSNQRLIFFCSYKGRGP 1349
              H       R  F  +++G  P
Sbjct: 327  FGHTVVRCYHR--FDINFQGYNP 347


>gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1241

 Score = 72.0 bits (175), Expect(2) = 1e-22
 Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 2/180 (1%)
 Frame = +1

Query: 1402 WIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GMSVTYT*HSSRTFNDHFFFLK*Y 1581
            W +D+GA  HI  +   L     Y G + I+T +G GM + +   S          LK  
Sbjct: 310  WYLDTGATDHITNELDKLDVREKYKGGDKIHTASGAGMEIKHIGDSVIHTPTRELHLK-N 368

Query: 1582 SSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQTSRNILFQGPHKNGFYPINFQSS 1761
                 QA +N++S+H+   DN   L + S+   +KD+ +RN + +G  +   Y +    +
Sbjct: 369  ILHVPQAKKNLISAHRLAMDNFAFLEVHSNYFLIKDRVTRNTILKGRCRRRLYSLPTSPA 428

Query: 1762 HHTYSSTISDNAFLHKRFCHPTFQTLQKIRRILNL--FNVSNKPSCCNECKLCRS*KLPF 1935
               +++T    +  H R  HP    + ++    NL    V+NK S C+ C+  +S +LP+
Sbjct: 429  KQVHAATTPSFSRWHSRLGHPAVPIVTRVLSKNNLPCSTVANKDSICDACQKGKSHQLPY 488



 Score = 63.5 bits (153), Expect(2) = 1e-22
 Identities = 65/294 (22%), Positives = 126/294 (42%), Gaps = 4/294 (1%)
 Frame = +3

Query: 426  MENPTASSFSKVPLYQITTFVHLKLKENNYYI*RNLMNHVIQRYKLKRFVDGTYPCP--- 596
            M   ++S+ S  PL+ +   V  KL + NY +    +   I+  +L   + G    P   
Sbjct: 1    MAGSSSSTASTNPLFGVQ--VSKKLTKGNYALWSAQVLAAIRGARLDGHITGATAAPSME 58

Query: 597  VQYTSPRNEANGIENLNYTDWLEEDSTIIMWINSTISDSFITYFSRSTSSHQLWRRIEEP 776
            ++ T+       I N  Y +W   D  ++ ++ ST+S   +T  + ++++ Q W+++   
Sbjct: 59   IEKTASDKTTEKIVNPAYQEWFASDQQVLGFLLSTLSRDILTQVATASTAAQAWQQVCAM 118

Query: 777  FARAKSTHFIQLRTKLLSLNQGDKSXXXXXXXK*NFS*PIGGCW*NCV*YKELVVITLKA 956
            F        + +R  L +  +G+ S           +  I       +  ++LV   L  
Sbjct: 119  FTAQTKARSLNVRLTLTNTQKGNMSISEYCGKMKALANEIASSG-KPLDEEDLVAYVLNG 177

Query: 957  LNSNYITFVMSMRHKNPPITSIELHNNLLSEESAVSGRLKNTKPEMDAKSFLDNNNFRCS 1136
            L+ ++   V ++  +N   T  E+++ LL+ E+  +  L+     ++A +       RC 
Sbjct: 178  LDDDFEPVVSAIVARNESTTMAEVYSQLLNFENRQA--LRQAHASVNAAA-------RC- 227

Query: 1137 FRGSFSRGYYRGTYSNGGRHPNPPIFARTTYG-RGNATSDKIPCQIC*SDTHLA 1295
             RG F RG   G  + G  +P  P   R T G +    +D+  CQ+C    H+A
Sbjct: 228  -RGVFQRGRGGGRGTRGRSNPAAPGRGRGTGGNQTRGGNDRPICQVCLKRGHVA 280


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score = 75.1 bits (183), Expect(2) = 2e-22
 Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 5/189 (2%)
 Frame = +1

Query: 1402 WIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GMSVTYT*HSSRTFNDHFFFLK*Y 1581
            W  D+GA  HI  D   L     Y GT+ I   NG GM+++   ++    +     L+  
Sbjct: 323  WYTDTGATDHITGDLDRLTMHDKYTGTDQIIAANGTGMTISNIGNAIVPTSSRSLHLRSV 382

Query: 1582 SSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQTSRNILFQGPHKNGFYPINFQSS 1761
                S   +N++S H+ T+DN+  +   S    +KD+ ++ +L  G  ++G YP+     
Sbjct: 383  LHVPS-THKNLISVHRLTNDNDVFIEFHSSHFLIKDRQTKAVLLHGKCRDGLYPLPPHPD 441

Query: 1762 ---HHTYSSTISDNAFLHKRFCHPTFQTLQKIRRILNLFNVSNK--PSCCNECKLCRS*K 1926
                H +SST       HKR  HP+   + ++    NL  +SN    S C+ C   ++ +
Sbjct: 442  LRLKHNFSSTRVPLEHWHKRLGHPSRDIVHRVISNNNLPCLSNNSTTSVCDACLQAKAHQ 501

Query: 1927 LPFQIFILQ 1953
            LP+ I + Q
Sbjct: 502  LPYTISMSQ 510



 Score = 59.7 bits (143), Expect(2) = 2e-22
 Identities = 62/280 (22%), Positives = 116/280 (41%), Gaps = 11/280 (3%)
 Frame = +3

Query: 495  KLKENNYYI*RNLMNHVIQRYKLKRFVDGTYPCPVQYTSPRNEAN-GIENLNYTDWLEED 671
            KL + NY + +  +   I+  +L   + G   CP +  S  ++    + N  Y  W+  D
Sbjct: 23   KLTKGNYLLWKAQVLPAIRAAQLDDILTGVEICPPKTISDASDRTVTVANPAYGRWIARD 82

Query: 672  STIIMWINSTISDSFITYFSRSTSSHQLWRRIEEPFARAKSTHFIQLRTKLLSLNQGDKS 851
              ++ ++ S++S   ++     ++S  +W  + E ++       +  R  L +  +G  S
Sbjct: 83   QAVLGYLLSSLSREVLSSVVNCSTSASVWTTLSEMYSSHSRARKVNTRIALATTKKGASS 142

Query: 852  XXXXXXXK*NFS*PIGGCW*NCV*YKELVVITLKALNSNYITFVMSMRHKNPPITSIELH 1031
                      F+  +G      +  +E V   L  L+ ++   V ++  ++ PIT  +L+
Sbjct: 143  VAEYFAKMRGFADELGAAG-KPLDDEEFVSFLLTGLDEDFNPLVTAVVARSDPITPGDLY 201

Query: 1032 NNLLSEESAVSGRLKNTKPEMDAKSFLDNN-NFRCSFRG-SFSRGYYRGTYSNGGRHPNP 1205
              LLS E+ +         +  + S + ++ N R   RG S+ R   RG     GR   P
Sbjct: 202  TQLLSYENRM-------HLQTGSSSLMQSSANARSPGRGMSWGRSGGRGFSRGRGRGRGP 254

Query: 1206 PIFARTTYGRGN--------ATSDKIPCQIC*SDTHLAPN 1301
                  ++GRGN         TS +  CQ+C    H A N
Sbjct: 255  SRGGFQSFGRGNNYSGATDADTSSRPRCQVCSRVGHTALN 294


>gb|EEC80484.1| hypothetical protein OsI_22718 [Oryza sativa Indica Group]
          Length = 506

 Score = 71.2 bits (173), Expect(2) = 6e-22
 Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 2/180 (1%)
 Frame = +1

Query: 1402 WIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GMSVTYT*HSSRTFNDHFFFLK*Y 1581
            W +D+GA  HI  +   L     Y G + I+T +G GM + +   S          LK  
Sbjct: 310  WYLDTGATDHITNELDKLDVWEKYKGGDKIHTASGAGMEIKHIGDSVIHTPTRELHLK-N 368

Query: 1582 SSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQTSRNILFQGPHKNGFYPINFQSS 1761
                 QA +N++S+H+   DN   L + S+   +KD+ +RN + +G  +   Y +    +
Sbjct: 369  ILHVPQAKKNLISAHRLAMDNFAFLEVHSNYFLIKDRATRNTILKGRCRRRLYSLPTSPA 428

Query: 1762 HHTYSSTISDNAFLHKRFCHPTFQTLQKIRRILNL--FNVSNKPSCCNECKLCRS*KLPF 1935
               +++T    +  H R  HP    + ++    NL    V+NK S C+ C+  +S +LP+
Sbjct: 429  KQVHAATTPSFSRWHSRLGHPAVPIVTRVLSKNNLPCSTVANKDSICDACQKGKSHQLPY 488



 Score = 62.0 bits (149), Expect(2) = 6e-22
 Identities = 62/294 (21%), Positives = 122/294 (41%), Gaps = 4/294 (1%)
 Frame = +3

Query: 426  MENPTASSFSKVPLYQITTFVHLKLKENNYYI*RNLMNHVIQRYKLKRFVDGTYPCP--- 596
            M   ++S+ S  PL+ +   V  KL + NY +    +   I+  +L   + G    P   
Sbjct: 1    MAGSSSSTASTNPLFGVQ--VSEKLTKGNYALWSAQVLAAIRGARLDGHITGATAAPSME 58

Query: 597  VQYTSPRNEANGIENLNYTDWLEEDSTIIMWINSTISDSFITYFSRSTSSHQLWRRIEEP 776
            ++ T+       I N  Y +W   D  ++ ++ ST+S   +T  + ++++ Q W+++   
Sbjct: 59   IEKTASDKTMEKIVNPAYQEWFASDQQVLGFLLSTLSRDILTQVATASTAAQAWQQVCAM 118

Query: 777  FARAKSTHFIQLRTKLLSLNQGDKSXXXXXXXK*NFS*PIGGCW*NCV*YKELVVITLKA 956
            F        + +R  L +  +G+ S           +  I       +  ++LV   L  
Sbjct: 119  FTAQTKARSLNVRLTLTNTQKGNMSISEYCGKMKALADEIASSG-KPLDEEDLVAYVLNG 177

Query: 957  LNSNYITFVMSMRHKNPPITSIELHNNLLSEESAVSGRLKNTKPEMDAKSFLDNNNFRCS 1136
            L+ ++   V ++  +N   T +E+++ L + E+  + R  +      A+           
Sbjct: 178  LDDDFEPVVSAIVARNESTTMVEVYSQLHNFENRQALRQAHASANAAARG---------- 227

Query: 1137 FRGSFSRGYYRGTYSNGGRHPNPPIFARTTYG-RGNATSDKIPCQIC*SDTHLA 1295
             RG F RG   G  + G  +P  P   R T G +    +D+  CQ+C    H+A
Sbjct: 228  -RGGFQRGRGGGRGTRGRSNPAAPGRGRGTGGNQTRGGNDRPICQVCLKRGHVA 280


>ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266915 [Solanum
            lycopersicum]
          Length = 544

 Score = 65.9 bits (159), Expect(2) = 5e-21
 Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
 Frame = +1

Query: 1396 DEWIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GMSVTYT*HSSRTFNDHFFFLK 1575
            + W  DSGA  H+ +D S L   + Y+G + +   NG  +S+ +   S  +       L 
Sbjct: 341  NSWFADSGATNHVTSDLSQLSIHMDYNGEDQLALGNGQKLSINHIGSSKLSCATRPLHLN 400

Query: 1576 *YSSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQTSRNILFQGPHKNGFY----- 1740
                  S  ++++LS  +FT DNN  +        VKD   + IL +G   +G Y     
Sbjct: 401  KILHVPS-ITKSLLSVSQFTKDNNVFMEFHPSCCFVKDPQGK-ILLRGSIDDGLYRFDGG 458

Query: 1741 --PINFQSSHHTYSSTISDNAFLHKRFCHPTFQTLQKIRRILNLFNVSNK-PSCCNECKL 1911
              P+   S+   +  + +     H+R  HP  Q L+++    NL   SNK P+ C  C+L
Sbjct: 459  GLPVISSSTPRAFVISRASLQAWHERLGHPHEQLLRRLVSSFNLPVTSNKMPAVCGSCQL 518

Query: 1912 CRS*KLP 1932
             +S ++P
Sbjct: 519  GKSHRIP 525



 Score = 64.3 bits (155), Expect(2) = 5e-21
 Identities = 63/277 (22%), Positives = 116/277 (41%), Gaps = 3/277 (1%)
 Frame = +3

Query: 492  LKLKENNYYI*RNLMNHVIQRYKLKRFVDGTY-PCPVQYTSPRNEANGIENLNYTDWLEE 668
            +KL   NYY+ ++ +    + + L+  +DGT  P     T+ ++ +    N  +T W + 
Sbjct: 39   IKLDCGNYYLWQSTVYSAFEAFDLEGHLDGTNSPSATILTTTQDTSASTTNPAFTAWKKR 98

Query: 669  DSTIIMWINSTISDSFITYFSRSTSSHQLWRRIEEPFARAKSTHFIQLRTKLLSLNQGDK 848
            D   ++W+ +T + S I Y     ++ + W  +   +        +QLR +L +  +G  
Sbjct: 99   DKIPLLWLKTTTNHSIIPYIMHIRTTREAWSYLSNLYQSQSRARVMQLRHQLQTTTKGSS 158

Query: 849  SXXXXXXXK*NFS*PIGGCW*NCV*YKELVVITLKALNSNYITFVMSMRHKNPPITSIEL 1028
            +       K   S  +       +  +EL+   L  L+S+Y  F  S+      +T+  L
Sbjct: 159  TIMDYVDKKRTISHSLALAA-RPITDEELMSAILFTLDSSYGPFRSSINPHLDNLTTDSL 217

Query: 1029 HNNLLSEESAVSGRLKNTKPEMDAKSFLDNNNFRCSFRGSFSRGYYRGTYSNGGR--HPN 1202
               LL EE  ++   K+ + + +A S   +N  R    G  ++     +  +  R  + N
Sbjct: 218  LGLLLQEEEKLAEETKSFQLQANAISRQYSN--RSPITGYPNQQSVTTSQKSSTRPTNTN 275

Query: 1203 PPIFARTTYGRGNATSDKIPCQIC*SDTHLAPNSNQR 1313
            PP          N +S +I CQIC    H A N   R
Sbjct: 276  PP-------RSSNRSSPRIICQICEKPNHHARNCYNR 305


>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
          Length = 1825

 Score = 75.9 bits (185), Expect(2) = 1e-20
 Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 5/196 (2%)
 Frame = +1

Query: 1363 VIIAVAEIFKKDEWIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GMSVTYT*HSS 1542
            V  A+    +   W VD+GA  HI ++   L     Y G + I+T +G GM + +  HS 
Sbjct: 438  VAAAIHTHARDSNWYVDTGATDHITSELEKLTARDVYKGHDQIHTASGSGMEIKHIGHSI 497

Query: 1543 RTFNDHFFFLK*YSSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQTSRNILFQGP 1722
                     L        QA++N++S+HK  +DN+  L + S    +KDQ +R  + +G 
Sbjct: 498  VHTPTRPLHLN-NVLHVPQANKNLISAHKLAADNSVFLEIHSKHFLIKDQATRRTVLKGR 556

Query: 1723 HKNGFYPI---NFQSSHHTYSSTISDNAFLHKRFCHPTFQTLQKI--RRILNLFNVSNKP 1887
             + G YP+   +  SS     +        H R  H +   + ++  +  L   + SNK 
Sbjct: 557  RQKGLYPVPSASPPSSAKVVCAVTPSFERWHSRLGHSSAPIISRVISKNKLPCLDESNKE 616

Query: 1888 SCCNECKLCRS*KLPF 1935
            S C+ C   +S +LP+
Sbjct: 617  SVCDACLKAKSHQLPY 632



 Score = 52.8 bits (125), Expect(2) = 1e-20
 Identities = 61/302 (20%), Positives = 124/302 (41%), Gaps = 9/302 (2%)
 Frame = +3

Query: 417  SS*MENPTASSFSKVPLYQITTFVHLKLKENNYYI*RNLMNHVIQRYKLKRFVDGTYPCP 596
            S+ M + + S+ S  PL  +   V  KL + N+ +    +   I+  +L+  ++G  P P
Sbjct: 135  STQMASTSNSAASSNPLIGVQ--VTEKLSKANHGLWVAQVLTAIRGARLEGHINGKNPAP 192

Query: 597  VQYTSPRNEANGIE--NLNYTDWLEEDSTIIMWINSTISDSFITYFSRSTSSHQLWRRIE 770
                +   +   ++  N NY +W   D  I+ ++ S+++   +   +   ++ + W+ ++
Sbjct: 193  PAEITKTVDGKEVKTSNPNYDEWFAADQQILGFLFSSLTRETLLQVAAVKTAAEAWKTLD 252

Query: 771  EPFARAKSTHFIQLRTKLLSLNQGDKSXXXXXXXK*NFS*PIGGCW*NCV*YKELVVITL 950
            + F        + +R  L +L +G+ S           +  +       +  +EL+   L
Sbjct: 253  DMFTSRTRARSLNVRLALTTLQKGNSSISEYIGKMKTLADEVAAAG-KPLDDEELIAYIL 311

Query: 951  KALNSNYITFVMSMRHKNPPITSIELHNNLLSEESAVSGRLKNTKPEMDAKSFLDNNNFR 1130
              L+ ++ + V ++  +  P+T  E+++ LLS E+ ++ R       M            
Sbjct: 312  NGLDEDFDSVVSTIVGRVEPVTVAEVYSQLLSFENRLAMRQAQATANM------------ 359

Query: 1131 CSFRGSFSRGYYRGTYSNGGRHPNPPIFARTTYGRGNATS------DKIP-CQIC*SDTH 1289
             + RG    G  RG  +N GR            GRG   +      D  P CQ+C    H
Sbjct: 360  -ANRGGRGGGGSRGGGANPGRGRGATRGRGAAPGRGRGNNQQQRSYDNRPLCQVCYKRGH 418

Query: 1290 LA 1295
            +A
Sbjct: 419  VA 420


>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
            gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1466

 Score = 66.2 bits (160), Expect(2) = 3e-20
 Identities = 70/289 (24%), Positives = 111/289 (38%), Gaps = 2/289 (0%)
 Frame = +3

Query: 495  KLKENNYYI*RNLMNHVIQRYKLKRFVDGTYPCPVQYTSPRNEANGIENLNYTDWLEEDS 674
            KL   NY +    ++ +   Y+L  F+DG+   P        +A    N +YT W  +D 
Sbjct: 25   KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIG--TDAAPRVNPDYTRWKRQDK 82

Query: 675  TIIMWINSTISDSFITYFSRSTSSHQLWRRIEEPFARAKSTHFIQLRTKLLSLNQGDKSX 854
             I   +   IS S     SR+T++ Q+W  + + +A     H  QLRT+L    +G K+ 
Sbjct: 83   LIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTI 142

Query: 855  XXXXXXK*NFS*PIGGCW*NCV*YKELVVITLKALNSNYITFVMSMRHKNPPITSIELHN 1034
                         +       + + E V   L+ L   Y   +  +  K+ P T  E+H 
Sbjct: 143  DDYMQGLVTRFDQL-ALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHE 201

Query: 1035 NLLSEESAVSGRLKNTKPEMDAKSFLDNNNFRCSFRGSFSRGYYRGTYSNGGRHPNPPIF 1214
             LL+ ES +      T   + A +    N    +   + +R   R    N   +  P   
Sbjct: 202  RLLNHESKILAVSSATVIPITANAVSHRNTTTTNNNNNGNRN-NRYDNRNNNNNSKPWQQ 260

Query: 1215 ARTTYGRGNATSDKI--PCQIC*SDTHLAPNSNQRLIFFCSYKGRGPPS 1355
            + T +   N  S      CQIC    H A   +Q   F  S   + PPS
Sbjct: 261  SSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPPS 309



 Score = 61.2 bits (147), Expect(2) = 3e-20
 Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 11/200 (5%)
 Frame = +1

Query: 1369 IAVAEIFKKDEWIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GMSVTYT*HS--- 1539
            +A+   +  + W++DSGA  HI +D + L    PY G + +   +G  + +++T  +   
Sbjct: 320  LALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLS 379

Query: 1540 --SRTFNDHFFFLK*YSSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQTSRNILF 1713
              SR  N H         +     +N++S ++  + N  S+        VKD  +   L 
Sbjct: 380  TKSRPLNLHNIL------YVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLL 433

Query: 1714 QGPHKNGFYPINFQSSH----HTYSSTISDNAFLHKRFCHPTFQTLQKI--RRILNLFNV 1875
            QG  K+  Y     SS         S+ + ++  H R  HP    L  +     L++ N 
Sbjct: 434  QGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNP 493

Query: 1876 SNKPSCCNECKLCRS*KLPF 1935
            S+K   C++C + +S K+PF
Sbjct: 494  SHKFLSCSDCLINKSNKVPF 513


>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
            gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1466

 Score = 66.2 bits (160), Expect(2) = 3e-20
 Identities = 70/289 (24%), Positives = 111/289 (38%), Gaps = 2/289 (0%)
 Frame = +3

Query: 495  KLKENNYYI*RNLMNHVIQRYKLKRFVDGTYPCPVQYTSPRNEANGIENLNYTDWLEEDS 674
            KL   NY +    ++ +   Y+L  F+DG+   P        +A    N +YT W  +D 
Sbjct: 25   KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIG--TDAAPRVNPDYTRWKRQDK 82

Query: 675  TIIMWINSTISDSFITYFSRSTSSHQLWRRIEEPFARAKSTHFIQLRTKLLSLNQGDKSX 854
             I   +   IS S     SR+T++ Q+W  + + +A     H  QLRT+L    +G K+ 
Sbjct: 83   LIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTI 142

Query: 855  XXXXXXK*NFS*PIGGCW*NCV*YKELVVITLKALNSNYITFVMSMRHKNPPITSIELHN 1034
                         +       + + E V   L+ L   Y   +  +  K+ P T  E+H 
Sbjct: 143  DDYMQGLVTRFDQL-ALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHE 201

Query: 1035 NLLSEESAVSGRLKNTKPEMDAKSFLDNNNFRCSFRGSFSRGYYRGTYSNGGRHPNPPIF 1214
             LL+ ES +      T   + A +    N    +   + +R   R    N   +  P   
Sbjct: 202  RLLNHESKILAVSSATVIPITANAVSHRNTTTTNNNNNGNRN-NRYDNRNNNNNSKPWQQ 260

Query: 1215 ARTTYGRGNATSDKI--PCQIC*SDTHLAPNSNQRLIFFCSYKGRGPPS 1355
            + T +   N  S      CQIC    H A   +Q   F  S   + PPS
Sbjct: 261  SSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPPS 309



 Score = 61.2 bits (147), Expect(2) = 3e-20
 Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 11/200 (5%)
 Frame = +1

Query: 1369 IAVAEIFKKDEWIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GMSVTYT*HS--- 1539
            +A+   +  + W++DSGA  HI +D + L    PY G + +   +G  + +++T  +   
Sbjct: 320  LALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLS 379

Query: 1540 --SRTFNDHFFFLK*YSSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQTSRNILF 1713
              SR  N H         +     +N++S ++  + N  S+        VKD  +   L 
Sbjct: 380  TKSRPLNLHNIL------YVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLL 433

Query: 1714 QGPHKNGFYPINFQSSH----HTYSSTISDNAFLHKRFCHPTFQTLQKI--RRILNLFNV 1875
            QG  K+  Y     SS         S+ + ++  H R  HP    L  +     L++ N 
Sbjct: 434  QGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNP 493

Query: 1876 SNKPSCCNECKLCRS*KLPF 1935
            S+K   C++C + +S K+PF
Sbjct: 494  SHKFLSCSDCLINKSNKVPF 513


>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score = 65.9 bits (159), Expect(2) = 4e-20
 Identities = 70/289 (24%), Positives = 111/289 (38%), Gaps = 2/289 (0%)
 Frame = +3

Query: 495  KLKENNYYI*RNLMNHVIQRYKLKRFVDGTYPCPVQYTSPRNEANGIENLNYTDWLEEDS 674
            KL   NY +    ++ +   Y+L  F+DG+   P        +A    N +YT W  +D 
Sbjct: 25   KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIG--TDAAPRVNPDYTRWKRQDK 82

Query: 675  TIIMWINSTISDSFITYFSRSTSSHQLWRRIEEPFARAKSTHFIQLRTKLLSLNQGDKSX 854
             I   +   IS S     SR+T++ Q+W  + + +A     H  QLRT+L    +G K+ 
Sbjct: 83   LIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTI 142

Query: 855  XXXXXXK*NFS*PIGGCW*NCV*YKELVVITLKALNSNYITFVMSMRHKNPPITSIELHN 1034
                         +       + + E V   L+ L   Y   +  +  K+ P T  E+H 
Sbjct: 143  DDYMQGFVTRFDQL-ALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHE 201

Query: 1035 NLLSEESAVSGRLKNTKPEMDAKSFLDNNNFRCSFRGSFSRGYYRGTYSNGGRHPNPPIF 1214
             LL+ ES +      T   + A +    N    +   + +R   R    N   +  P   
Sbjct: 202  RLLNHESKILAVSSATVIPITANAVSHRNTTTTNNNNNGNRN-NRYDNRNNNNNSKPWQQ 260

Query: 1215 ARTTYGRGNATSDKI--PCQIC*SDTHLAPNSNQRLIFFCSYKGRGPPS 1355
            + T +   N  S      CQIC    H A   +Q   F  S   + PPS
Sbjct: 261  SSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPPS 309



 Score = 61.2 bits (147), Expect(2) = 4e-20
 Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 11/200 (5%)
 Frame = +1

Query: 1369 IAVAEIFKKDEWIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GMSVTYT*HS--- 1539
            +A+   +  + W++DSGA  HI +D + L    PY G + +   +G  + +++T  +   
Sbjct: 320  LALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLS 379

Query: 1540 --SRTFNDHFFFLK*YSSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQTSRNILF 1713
              SR  N H         +     +N++S ++  + N  S+        VKD  +   L 
Sbjct: 380  TKSRPLNLHNIL------YVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLL 433

Query: 1714 QGPHKNGFYPINFQSSH----HTYSSTISDNAFLHKRFCHPTFQTLQKI--RRILNLFNV 1875
            QG  K+  Y     SS         S+ + ++  H R  HP    L  +     L++ N 
Sbjct: 434  QGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNP 493

Query: 1876 SNKPSCCNECKLCRS*KLPF 1935
            S+K   C++C + +S K+PF
Sbjct: 494  SHKFLSCSDCLINKSNKVPF 513


>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1202

 Score = 75.5 bits (184), Expect(2) = 5e-20
 Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
 Frame = +1

Query: 1402 WIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GMSVTYT*HSSRTFNDHFFFLK*Y 1581
            W VD+GA  HI      L     Y GT+ I+T +G GMS+ +  H+          LK  
Sbjct: 322  WYVDTGATDHITGQLDKLTTKERYKGTDQIHTASGEGMSIKHVGHAIVPTPSRPLHLK-N 380

Query: 1582 SSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQTSRNILFQGPHKNGFYPINFQSS 1761
                 +A++N++S HK  +DN   L +      +KD+ +R  + +GP + G YP+  +SS
Sbjct: 381  VLHVPEAAKNLVSVHKLVADNYAFLEIHGKYFLIKDKATRRTILEGPCRRGLYPLPARSS 440

Query: 1762 HHTYSSTISDNAFLHKRFCHPTFQTLQKIRRILNLFNVSN--KPSCCNECKLCRS*KLPF 1935
                          H R  HP+   + +I     L  +SN    S C+ C+  +  +LPF
Sbjct: 441  LRQAFVATPSFVRWHGRLGHPSKPIVLRILSQNKLPCLSNSVNESVCDACQQAKCHQLPF 500



 Score = 51.2 bits (121), Expect(2) = 5e-20
 Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 2/223 (0%)
 Frame = +3

Query: 633  IENLNYTDWLEEDSTIIMWINSTISDSFITYFSRSTSSHQLWRRIEEPFARAKSTHFIQL 812
            I N  Y  W  +D  ++ +I S++S   +   + + ++ Q W  I++ F+       I +
Sbjct: 74   IPNPEYKTWFVQDQQVLGFIFSSLSREVLQQVAGARTAAQAWNMIDDMFSCKSKAGTINV 133

Query: 813  RTKLLSLNQGDKSXXXXXXXK*NFS*PIGGCW*NCV*YKELVVITLKALNSNYITFVMSM 992
               L +  +G  S         + +  +       +  +ELV   +  L+S +   V  +
Sbjct: 134  LLALTTTQKGPMSISEYIAKMRSLADEMAAAG-KPLDEEELVAYIINGLDSEFDAAVEGL 192

Query: 993  RH--KNPPITSIELHNNLLSEESAVSGRLKNTKPEMDAKSFLDNNNFRCSFRGSFSRGYY 1166
                +  P++   +++ LLS E+ +  R        +A +       R S  G+  RG  
Sbjct: 193  MATARIAPVSISHVYSQLLSYENRIRIRQAYLTTSANAANRGGGRGGRGSSTGN--RGGG 250

Query: 1167 RGTYSNGGRHPNPPIFARTTYGRGNATSDKIPCQIC*SDTHLA 1295
            RG +  GGR    P  A    GRGN T  +  CQ+C    H+A
Sbjct: 251  RGGFGRGGRGRGAPSGASQGRGRGNDT--RPVCQVCHKRGHVA 291


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score = 76.3 bits (186), Expect(2) = 6e-19
 Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
 Frame = +1

Query: 1402 WIVDSGANTHIAADASLLQEDIPYDGTEIINTTNG*GMSVTYT*HSSRTFNDHFFFLK*Y 1581
            W VD+GA  HI      L     Y GT+ I+T +G G S+ +  H+      H   LK  
Sbjct: 313  WYVDTGATDHITGQLDKLTTKERYKGTDQIHTASGEGTSIKHVGHAIVPTPSHPLHLK-N 371

Query: 1582 SSFASQASQNILSSHKFTSDNNYSLTLDSHGSSVKDQTSRNILFQGPHKNGFYPINFQSS 1761
                 +A++N++S HK  +DN   L +      +KD+ +R  + +GP + G YP+  +SS
Sbjct: 372  VLHVPEAAKNLVSVHKLVADNYAFLEIHGKYFLIKDKATRRTILEGPCRRGLYPLPARSS 431

Query: 1762 HHTYSSTISDNAFLHKRFCHPTFQTLQKIRRILNLFNVSN--KPSCCNECKLCRS*KLPF 1935
                          H R  HP+   + +I     L  +SN    S C+ C+  +  +LPF
Sbjct: 432  LRQAFVATPSFVRWHGRLGHPSKPIVLRILSQNKLPCLSNSVNESVCDACQQAKCHQLPF 491



 Score = 47.0 bits (110), Expect(2) = 6e-19
 Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 2/223 (0%)
 Frame = +3

Query: 633  IENLNYTDWLEEDSTIIMWINSTISDSFITYFSRSTSSHQLWRRIEEPFARAKSTHFIQL 812
            I N  Y  W  +D  ++ +I S++S   +   + + ++ Q W  I++ F+          
Sbjct: 74   IPNPEYKTWFVQDQQVLGFIFSSLSREVLQQVAGARTAAQAWNMIDDMFS---------C 124

Query: 813  RTKLLSLNQGDKSXXXXXXXK*NFS*PIGGCW*NCV*YKELVVITLKALNSNYITFVMSM 992
            ++K  ++N+G  S         + +  +       +  +ELV   +  L+S +   V  +
Sbjct: 125  KSKAGTINKGPMSMSEYIAKMRSLADKMAATG-KPLDEEELVAYIINGLDSEFDAAVEGL 183

Query: 993  RH--KNPPITSIELHNNLLSEESAVSGRLKNTKPEMDAKSFLDNNNFRCSFRGSFSRGYY 1166
                +  P++   +++ LLS E+ +  R        +A +       R S  G+  RG  
Sbjct: 184  MATARIAPVSISHVYSQLLSYENRIRIRQAYLTTSANAANRGGGRGGRGSSTGN--RGGG 241

Query: 1167 RGTYSNGGRHPNPPIFARTTYGRGNATSDKIPCQIC*SDTHLA 1295
            RG +  GG     P  A    GRGN T  +  CQ+C    H+A
Sbjct: 242  RGGFGRGGHGRGAPSGASQGRGRGNDT--RPVCQVCHKRGHVA 282