BLASTX nr result
ID: Papaver25_contig00029946
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00029946
(744 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308775.1| transcription initiation factor IIF alpha su... 140 8e-60
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu... 140 8e-60
emb|CBI33123.3| unnamed protein product [Vitis vinifera] 131 2e-59
ref|XP_002262798.2| PREDICTED: transcription initiation factor I... 131 2e-59
emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera] 131 2e-59
ref|XP_006352364.1| PREDICTED: transcription initiation factor I... 131 2e-58
ref|XP_006352367.1| PREDICTED: transcription initiation factor I... 131 2e-58
ref|XP_007026247.1| Transcription activators,DNA binding,RNA pol... 131 3e-58
ref|XP_007026249.1| Transcription activators,DNA binding,RNA pol... 131 3e-58
ref|XP_007026248.1| Transcription activators,DNA binding,RNA pol... 131 3e-58
ref|XP_004250258.1| PREDICTED: transcription initiation factor I... 130 3e-58
gb|EYU27712.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus... 127 6e-58
ref|XP_002322538.2| transcription initiation factor IIF alpha su... 136 1e-57
ref|XP_002872663.1| mutant TFIIF-alpha [Arabidopsis lyrata subsp... 129 5e-57
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|... 128 2e-56
ref|XP_006396740.1| hypothetical protein EUTSA_v10028564mg [Eutr... 127 2e-56
ref|XP_006467340.1| PREDICTED: transcription initiation factor I... 128 1e-55
ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citr... 128 1e-55
ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis] gi|... 122 1e-55
sp|Q9SU25.1|T2FA_ARATH RecName: Full=Transcription initiation fa... 120 2e-54
>ref|XP_002308775.1| transcription initiation factor IIF alpha subunit family protein
[Populus trichocarpa] gi|222854751|gb|EEE92298.1|
transcription initiation factor IIF alpha subunit family
protein [Populus trichocarpa]
Length = 541
Score = 140 bits (352), Expect(2) = 8e-60
Identities = 69/103 (66%), Positives = 82/103 (79%), Gaps = 3/103 (2%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVERDEKKDG---GSRGGCKKENDDEDEGNVSDK 378
++RRKT DGYERW+MK A++GAA F EVE+ + KDG G RGG KK N D+DEGNVSDK
Sbjct: 183 KNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVSDK 242
Query: 379 GGEDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
G EDEE+EA RK+R LNK GD D+EGPRGG+ DM+DDDIEK
Sbjct: 243 GEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEK 285
Score = 117 bits (294), Expect(2) = 8e-60
Identities = 59/80 (73%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSW--YNFDKVAQYK 175
KFKNKPWLLEDET QFQ+ GHLEG+Q A+YYL MM GKEFVAI AGSW YNF+KVA YK
Sbjct: 112 KFKNKPWLLEDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYK 171
Query: 176 QLTLEEVEEKMKTGERLLMG 235
QLTLEE EEKMK + G
Sbjct: 172 QLTLEEAEEKMKNRRKTADG 191
>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
gi|550335193|gb|ERP58675.1| hypothetical protein
POPTR_0006s01070g [Populus trichocarpa]
Length = 536
Score = 140 bits (352), Expect(2) = 8e-60
Identities = 69/103 (66%), Positives = 82/103 (79%), Gaps = 3/103 (2%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVERDEKKDG---GSRGGCKKENDDEDEGNVSDK 378
++RRKT DGYERW+MK A++GAA F EVE+ + KDG G RGG KK N D+DEGNVSDK
Sbjct: 183 KNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVSDK 242
Query: 379 GGEDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
G EDEE+EA RK+R LNK GD D+EGPRGG+ DM+DDDIEK
Sbjct: 243 GEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEK 285
Score = 117 bits (294), Expect(2) = 8e-60
Identities = 59/80 (73%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSW--YNFDKVAQYK 175
KFKNKPWLLEDET QFQ+ GHLEG+Q A+YYL MM GKEFVAI AGSW YNF+KVA YK
Sbjct: 112 KFKNKPWLLEDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYK 171
Query: 176 QLTLEEVEEKMKTGERLLMG 235
QLTLEE EEKMK + G
Sbjct: 172 QLTLEEAEEKMKNRRKTADG 191
>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 131 bits (329), Expect(2) = 2e-59
Identities = 64/104 (61%), Positives = 82/104 (78%), Gaps = 4/104 (3%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVER-DEKKDGGSRGGC---KKENDDEDEGNVSD 375
++RR+T DGY+RW+MK AN+G A F EVE+ D+K+ GG+ GG KK+ DE+EGNVSD
Sbjct: 181 KNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSD 240
Query: 376 KGGEDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
K EDEE+EA RKNR LNK+ GD D+EGPRGG+ D++DDDIEK
Sbjct: 241 KAEEDEEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEK 284
Score = 125 bits (314), Expect(2) = 2e-59
Identities = 60/78 (76%), Positives = 66/78 (84%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSWYNFDKVAQYKQL 181
K+KNKPWLLEDET Q+Q+HG LEG+Q A+YYL MMQGKEFVAI AGSWYNF+KVAQYKQL
Sbjct: 112 KYKNKPWLLEDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQL 171
Query: 182 TLEEVEEKMKTGERLLMG 235
TLEE EEKMK R G
Sbjct: 172 TLEEAEEKMKNRRRTADG 189
>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Vitis vinifera]
Length = 534
Score = 131 bits (329), Expect(2) = 2e-59
Identities = 64/104 (61%), Positives = 82/104 (78%), Gaps = 4/104 (3%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVER-DEKKDGGSRGGC---KKENDDEDEGNVSD 375
++RR+T DGY+RW+MK AN+G A F EVE+ D+K+ GG+ GG KK+ DE+EGNVSD
Sbjct: 176 KNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSD 235
Query: 376 KGGEDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
K EDEE+EA RKNR LNK+ GD D+EGPRGG+ D++DDDIEK
Sbjct: 236 KAEEDEEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEK 279
Score = 125 bits (314), Expect(2) = 2e-59
Identities = 60/78 (76%), Positives = 66/78 (84%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSWYNFDKVAQYKQL 181
K+KNKPWLLEDET Q+Q+HG LEG+Q A+YYL MMQGKEFVAI AGSWYNF+KVAQYKQL
Sbjct: 107 KYKNKPWLLEDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQL 166
Query: 182 TLEEVEEKMKTGERLLMG 235
TLEE EEKMK R G
Sbjct: 167 TLEEAEEKMKNRRRTADG 184
>emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]
Length = 435
Score = 131 bits (329), Expect(2) = 2e-59
Identities = 64/104 (61%), Positives = 82/104 (78%), Gaps = 4/104 (3%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVER-DEKKDGGSRGGC---KKENDDEDEGNVSD 375
++RR+T DGY+RW+MK AN+G A F EVE+ D+K+ GG+ GG KK+ DE+EGNVSD
Sbjct: 77 KNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSD 136
Query: 376 KGGEDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
K EDEE+EA RKNR LNK+ GD D+EGPRGG+ D++DDDIEK
Sbjct: 137 KAEEDEEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEK 180
Score = 125 bits (314), Expect(2) = 2e-59
Identities = 60/78 (76%), Positives = 66/78 (84%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSWYNFDKVAQYKQL 181
K+KNKPWLLEDET Q+Q+HG LEG+Q A+YYL MMQGKEFVAI AGSWYNF+KVAQYKQL
Sbjct: 8 KYKNKPWLLEDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQL 67
Query: 182 TLEEVEEKMKTGERLLMG 235
TLEE EEKMK R G
Sbjct: 68 TLEEAEEKMKNRRRTADG 85
>ref|XP_006352364.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Solanum tuberosum]
gi|565371548|ref|XP_006352365.1| PREDICTED:
transcription initiation factor IIF subunit alpha-like
isoform X2 [Solanum tuberosum]
gi|565371550|ref|XP_006352366.1| PREDICTED:
transcription initiation factor IIF subunit alpha-like
isoform X3 [Solanum tuberosum]
Length = 538
Score = 131 bits (329), Expect(2) = 2e-58
Identities = 65/102 (63%), Positives = 79/102 (77%), Gaps = 2/102 (1%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVERDEKKDGGSRG--GCKKENDDEDEGNVSDKG 381
++RRKT DGY+RW+MK AN+G A F EVER + K+GGS G G KK + DEDEGN SD G
Sbjct: 180 KNRRKTADGYQRWMMKAANNGPAAFGEVERFDDKEGGSGGTRGRKKTSGDEDEGNASDHG 239
Query: 382 GEDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
EDEE+EA RKNR LNK+ D D+EGPRGG+ D++DDDIEK
Sbjct: 240 DEDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEK 281
Score = 122 bits (306), Expect(2) = 2e-58
Identities = 59/78 (75%), Positives = 63/78 (80%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSWYNFDKVAQYKQL 181
K+KNKPWLLEDET QFQ HGHLEGAQ A YYL MMQG+E AI AGSWYNF+KVAQYKQL
Sbjct: 111 KYKNKPWLLEDETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQL 170
Query: 182 TLEEVEEKMKTGERLLMG 235
TLEE EEKMK + G
Sbjct: 171 TLEEAEEKMKNRRKTADG 188
>ref|XP_006352367.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X4 [Solanum tuberosum]
Length = 535
Score = 131 bits (329), Expect(2) = 2e-58
Identities = 65/102 (63%), Positives = 79/102 (77%), Gaps = 2/102 (1%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVERDEKKDGGSRG--GCKKENDDEDEGNVSDKG 381
++RRKT DGY+RW+MK AN+G A F EVER + K+GGS G G KK + DEDEGN SD G
Sbjct: 180 KNRRKTADGYQRWMMKAANNGPAAFGEVERFDDKEGGSGGTRGRKKTSGDEDEGNASDHG 239
Query: 382 GEDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
EDEE+EA RKNR LNK+ D D+EGPRGG+ D++DDDIEK
Sbjct: 240 DEDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEK 281
Score = 122 bits (306), Expect(2) = 2e-58
Identities = 59/78 (75%), Positives = 63/78 (80%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSWYNFDKVAQYKQL 181
K+KNKPWLLEDET QFQ HGHLEGAQ A YYL MMQG+E AI AGSWYNF+KVAQYKQL
Sbjct: 111 KYKNKPWLLEDETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQL 170
Query: 182 TLEEVEEKMKTGERLLMG 235
TLEE EEKMK + G
Sbjct: 171 TLEEAEEKMKNRRKTADG 188
>ref|XP_007026247.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 1 [Theobroma cacao]
gi|508781613|gb|EOY28869.1| Transcription activators,DNA
binding,RNA polymerase II transcription
factors,catalytics,transcription initiation factors
isoform 1 [Theobroma cacao]
Length = 549
Score = 131 bits (329), Expect(2) = 3e-58
Identities = 65/102 (63%), Positives = 79/102 (77%), Gaps = 2/102 (1%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVERDEKKDGGSRGGC--KKENDDEDEGNVSDKG 381
++RRKT DGYERW+MK AN+GAA F EVE+ + KD GG KK D+DEG+VSD+G
Sbjct: 181 KNRRKTADGYERWMMKAANNGAAAFGEVEKFDDKDNSVAGGKGRKKPTGDDDEGHVSDRG 240
Query: 382 GEDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
EDEE+EA RKNR L+KK GD D+EGPRGG+ DM+DDDIEK
Sbjct: 241 EEDEEEEAARKNRLGLDKKGGDDDEEGPRGGDLDMDDDDIEK 282
Score = 121 bits (304), Expect(2) = 3e-58
Identities = 58/78 (74%), Positives = 65/78 (83%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSWYNFDKVAQYKQL 181
K+KNKPW+LEDET Q Q+ GHLEG+Q A+YYL MMQGKEFVAI AGSWYNF+KVAQYKQL
Sbjct: 112 KYKNKPWMLEDETGQAQYQGHLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQL 171
Query: 182 TLEEVEEKMKTGERLLMG 235
TLEE EEKMK + G
Sbjct: 172 TLEEAEEKMKNRRKTADG 189
>ref|XP_007026249.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 3 [Theobroma cacao]
gi|508781615|gb|EOY28871.1| Transcription activators,DNA
binding,RNA polymerase II transcription
factors,catalytics,transcription initiation factors
isoform 3 [Theobroma cacao]
Length = 496
Score = 131 bits (329), Expect(2) = 3e-58
Identities = 65/102 (63%), Positives = 79/102 (77%), Gaps = 2/102 (1%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVERDEKKDGGSRGGC--KKENDDEDEGNVSDKG 381
++RRKT DGYERW+MK AN+GAA F EVE+ + KD GG KK D+DEG+VSD+G
Sbjct: 128 KNRRKTADGYERWMMKAANNGAAAFGEVEKFDDKDNSVAGGKGRKKPTGDDDEGHVSDRG 187
Query: 382 GEDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
EDEE+EA RKNR L+KK GD D+EGPRGG+ DM+DDDIEK
Sbjct: 188 EEDEEEEAARKNRLGLDKKGGDDDEEGPRGGDLDMDDDDIEK 229
Score = 121 bits (304), Expect(2) = 3e-58
Identities = 58/78 (74%), Positives = 65/78 (83%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSWYNFDKVAQYKQL 181
K+KNKPW+LEDET Q Q+ GHLEG+Q A+YYL MMQGKEFVAI AGSWYNF+KVAQYKQL
Sbjct: 59 KYKNKPWMLEDETGQAQYQGHLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQL 118
Query: 182 TLEEVEEKMKTGERLLMG 235
TLEE EEKMK + G
Sbjct: 119 TLEEAEEKMKNRRKTADG 136
>ref|XP_007026248.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 2 [Theobroma cacao]
gi|508781614|gb|EOY28870.1| Transcription activators,DNA
binding,RNA polymerase II transcription
factors,catalytics,transcription initiation factors
isoform 2 [Theobroma cacao]
Length = 473
Score = 131 bits (329), Expect(2) = 3e-58
Identities = 65/102 (63%), Positives = 79/102 (77%), Gaps = 2/102 (1%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVERDEKKDGGSRGGC--KKENDDEDEGNVSDKG 381
++RRKT DGYERW+MK AN+GAA F EVE+ + KD GG KK D+DEG+VSD+G
Sbjct: 105 KNRRKTADGYERWMMKAANNGAAAFGEVEKFDDKDNSVAGGKGRKKPTGDDDEGHVSDRG 164
Query: 382 GEDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
EDEE+EA RKNR L+KK GD D+EGPRGG+ DM+DDDIEK
Sbjct: 165 EEDEEEEAARKNRLGLDKKGGDDDEEGPRGGDLDMDDDDIEK 206
Score = 121 bits (304), Expect(2) = 3e-58
Identities = 58/78 (74%), Positives = 65/78 (83%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSWYNFDKVAQYKQL 181
K+KNKPW+LEDET Q Q+ GHLEG+Q A+YYL MMQGKEFVAI AGSWYNF+KVAQYKQL
Sbjct: 36 KYKNKPWMLEDETGQAQYQGHLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQL 95
Query: 182 TLEEVEEKMKTGERLLMG 235
TLEE EEKMK + G
Sbjct: 96 TLEEAEEKMKNRRKTADG 113
>ref|XP_004250258.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Solanum lycopersicum]
Length = 534
Score = 130 bits (326), Expect(2) = 3e-58
Identities = 64/102 (62%), Positives = 79/102 (77%), Gaps = 2/102 (1%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVERDEKKDGGSRG--GCKKENDDEDEGNVSDKG 381
++RRKT DGY+RW+MK AN+G A F E+ER + K+GGS G G KK + DEDEGN SD G
Sbjct: 180 KNRRKTADGYQRWMMKAANNGPAAFGELERFDDKEGGSGGTRGRKKTSGDEDEGNASDHG 239
Query: 382 GEDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
EDEE+EA RKNR LNK+ D D+EGPRGG+ D++DDDIEK
Sbjct: 240 DEDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEK 281
Score = 122 bits (306), Expect(2) = 3e-58
Identities = 59/78 (75%), Positives = 63/78 (80%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSWYNFDKVAQYKQL 181
K+KNKPWLLEDET QFQ HGHLEGAQ A YYL MMQG+E AI AGSWYNF+KVAQYKQL
Sbjct: 111 KYKNKPWLLEDETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQL 170
Query: 182 TLEEVEEKMKTGERLLMG 235
TLEE EEKMK + G
Sbjct: 171 TLEEAEEKMKNRRKTADG 188
>gb|EYU27712.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus guttatus]
Length = 534
Score = 127 bits (318), Expect(2) = 6e-58
Identities = 60/78 (76%), Positives = 66/78 (84%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSWYNFDKVAQYKQL 181
KFKNKPWLLEDET QFQ+HGH EG+Q A+YYL M+QGKEFVAI AGSWYNF+KVAQYKQL
Sbjct: 110 KFKNKPWLLEDETGQFQYHGHFEGSQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQL 169
Query: 182 TLEEVEEKMKTGERLLMG 235
TLEE EEKMK + G
Sbjct: 170 TLEEAEEKMKNRRKTADG 187
Score = 124 bits (312), Expect(2) = 6e-58
Identities = 63/102 (61%), Positives = 75/102 (73%), Gaps = 2/102 (1%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVER--DEKKDGGSRGGCKKENDDEDEGNVSDKG 381
++RRKT DGY+RW+MK AN+G A F EVE+ E GG RG KK D+DEGNVSD+G
Sbjct: 179 KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDGEGASGGGRGR-KKSTGDDDEGNVSDRG 237
Query: 382 GEDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
EDEE+EA RK R LNKK D D+EGPRGG+ D +DDDIEK
Sbjct: 238 DEDEEEEASRKGRLGLNKKHADDDEEGPRGGDLDFDDDDIEK 279
>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
[Populus trichocarpa] gi|550320589|gb|EEF04299.2|
transcription initiation factor IIF alpha subunit family
protein [Populus trichocarpa]
Length = 540
Score = 136 bits (343), Expect(2) = 1e-57
Identities = 66/103 (64%), Positives = 83/103 (80%), Gaps = 3/103 (2%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVERDEKKDG---GSRGGCKKENDDEDEGNVSDK 378
++RRKT DGYERW+MK AN+GAA F EVE+ + K+G G RGG +K + D+DEGNVSD+
Sbjct: 183 KNRRKTADGYERWMMKAANNGAAAFGEVEKVDDKEGVSAGGRGGRRKASGDDDEGNVSDR 242
Query: 379 GGEDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
G EDEE+EA RK+R LNK+ GD D+EGPRGG+ DM+DDDIEK
Sbjct: 243 GEEDEEEEAGRKSRLGLNKQGGDDDEEGPRGGDLDMDDDDIEK 285
Score = 114 bits (285), Expect(2) = 1e-57
Identities = 58/80 (72%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSW--YNFDKVAQYK 175
KFKNKPWLLEDET Q Q+ GHLEG+Q A+YYL MM GKEFVAI AGSW YNF+KVA YK
Sbjct: 112 KFKNKPWLLEDETGQSQYQGHLEGSQSATYYLLMMTGKEFVAIPAGSWYVYNFNKVAHYK 171
Query: 176 QLTLEEVEEKMKTGERLLMG 235
QLTLEE EEKMK + G
Sbjct: 172 QLTLEEAEEKMKNRRKTADG 191
>ref|XP_002872663.1| mutant TFIIF-alpha [Arabidopsis lyrata subsp. lyrata]
gi|297318500|gb|EFH48922.1| mutant TFIIF-alpha
[Arabidopsis lyrata subsp. lyrata]
Length = 619
Score = 129 bits (323), Expect(2) = 5e-57
Identities = 63/104 (60%), Positives = 77/104 (74%), Gaps = 4/104 (3%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVERDEKKDG----GSRGGCKKENDDEDEGNVSD 375
++RRKT DGY+RW+MK AN+G A F EV+ D++ G G RG K DEDEGNVSD
Sbjct: 179 KNRRKTADGYQRWMMKAANNGPALFGEVDNDKESGGSSGGGGRGRKKSSGGDEDEGNVSD 238
Query: 376 KGGEDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
+G EDEE+EA RK+R LNKK D D+EGPRGG+ DM+DDDIEK
Sbjct: 239 RGEEDEEEEASRKSRLGLNKKSNDDDEEGPRGGDLDMDDDDIEK 282
Score = 119 bits (299), Expect(2) = 5e-57
Identities = 57/78 (73%), Positives = 64/78 (82%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSWYNFDKVAQYKQL 181
K KNKPW+LEDET QFQ+ GHLEG+Q A+YYL +MQ KEFVAI AGSWYNF+KVAQYKQL
Sbjct: 110 KLKNKPWILEDETGQFQYQGHLEGSQSATYYLLVMQNKEFVAIPAGSWYNFNKVAQYKQL 169
Query: 182 TLEEVEEKMKTGERLLMG 235
TLEE EEKMK + G
Sbjct: 170 TLEEAEEKMKNRRKTADG 187
>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis]
gi|223541454|gb|EEF43004.1| tfiif-alpha, putative
[Ricinus communis]
Length = 533
Score = 128 bits (322), Expect(2) = 2e-56
Identities = 63/101 (62%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Frame = +1
Query: 211 DRRKTVDGYERWVMKVANSGAATFVEVERDEKKDGGSRGGC--KKENDDEDEGNVSDKGG 384
+RRKT DGYERW+MK AN+G A F EVE+ + KD G+ G KK D++EGNVSD+G
Sbjct: 183 NRRKTADGYERWMMKAANNGPAAFGEVEKLDDKDSGAASGRGRKKAAGDDEEGNVSDRGD 242
Query: 385 EDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
EDEE+EA RKNR LNK+ GD D+EGPRGG+ D++DDDIEK
Sbjct: 243 EDEEEEAARKNRLGLNKRGGDDDEEGPRGGDHDIDDDDIEK 283
Score = 118 bits (295), Expect(2) = 2e-56
Identities = 55/78 (70%), Positives = 65/78 (83%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSWYNFDKVAQYKQL 181
K+KN+PWLLEDET QFQ+ GHLEG+Q A+YYL ++QGKEFVAI A SWYNF+KVAQYKQL
Sbjct: 113 KYKNRPWLLEDETGQFQYQGHLEGSQSATYYLLILQGKEFVAIPASSWYNFNKVAQYKQL 172
Query: 182 TLEEVEEKMKTGERLLMG 235
TLEE EEKM+ + G
Sbjct: 173 TLEEAEEKMRNRRKTADG 190
>ref|XP_006396740.1| hypothetical protein EUTSA_v10028564mg [Eutrema salsugineum]
gi|557097757|gb|ESQ38193.1| hypothetical protein
EUTSA_v10028564mg [Eutrema salsugineum]
Length = 542
Score = 127 bits (318), Expect(2) = 2e-56
Identities = 62/104 (59%), Positives = 76/104 (73%), Gaps = 4/104 (3%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVERDEK----KDGGSRGGCKKENDDEDEGNVSD 375
++RRKT DGY+RW+MK AN+G A F E E D++ GG RG K DE+EGNVSD
Sbjct: 180 KNRRKTADGYQRWMMKAANNGPALFGETENDKEAGGSSGGGGRGRKKSSGGDEEEGNVSD 239
Query: 376 KGGEDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
+G EDEE+EA RK+R LNKK D D+EGPRGG+ DM+DDDIEK
Sbjct: 240 RGEEDEEEEASRKSRLGLNKKSNDDDEEGPRGGDLDMDDDDIEK 283
Score = 119 bits (298), Expect(2) = 2e-56
Identities = 56/78 (71%), Positives = 64/78 (82%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSWYNFDKVAQYKQL 181
K KNKPW+LEDET QFQ+ GHLEG+Q A+YYL +MQ KEF+AI AGSWYNF+KVAQYKQL
Sbjct: 111 KLKNKPWILEDETGQFQYQGHLEGSQSATYYLLVMQNKEFIAIPAGSWYNFNKVAQYKQL 170
Query: 182 TLEEVEEKMKTGERLLMG 235
TLEE EEKMK + G
Sbjct: 171 TLEEAEEKMKNRRKTADG 188
>ref|XP_006467340.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Citrus sinensis]
gi|568825955|ref|XP_006467341.1| PREDICTED:
transcription initiation factor IIF subunit alpha-like
isoform X2 [Citrus sinensis]
Length = 538
Score = 128 bits (321), Expect(2) = 1e-55
Identities = 62/102 (60%), Positives = 82/102 (80%), Gaps = 2/102 (1%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVER-DEKKDGGSRG-GCKKENDDEDEGNVSDKG 381
++RRKT DGYERW+MK AN+GAA F EVE+ D+K+ G+ G G K++ DEDEGNVSD+G
Sbjct: 181 KNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRG 240
Query: 382 GEDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
EDE++EA RKNR LNK+ D D+EGPRGG+ D+++DD+EK
Sbjct: 241 EEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEK 282
Score = 115 bits (289), Expect(2) = 1e-55
Identities = 55/78 (70%), Positives = 63/78 (80%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSWYNFDKVAQYKQL 181
K+KNKPW+LEDET Q Q+ GHLEG+Q A+YYL +M KEFVAI AGSWYNF+KVAQYKQL
Sbjct: 112 KYKNKPWMLEDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQL 171
Query: 182 TLEEVEEKMKTGERLLMG 235
TLEE EEKMK + G
Sbjct: 172 TLEEAEEKMKNRRKTADG 189
>ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
gi|567915083|ref|XP_006449855.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
gi|557552465|gb|ESR63094.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
gi|557552466|gb|ESR63095.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
Length = 538
Score = 128 bits (321), Expect(2) = 1e-55
Identities = 62/102 (60%), Positives = 82/102 (80%), Gaps = 2/102 (1%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVER-DEKKDGGSRG-GCKKENDDEDEGNVSDKG 381
++RRKT DGYERW+MK AN+GAA F EVE+ D+K+ G+ G G K++ DEDEGNVSD+G
Sbjct: 181 KNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRG 240
Query: 382 GEDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
EDE++EA RKNR LNK+ D D+EGPRGG+ D+++DD+EK
Sbjct: 241 EEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEK 282
Score = 115 bits (289), Expect(2) = 1e-55
Identities = 55/78 (70%), Positives = 63/78 (80%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSWYNFDKVAQYKQL 181
K+KNKPW+LEDET Q Q+ GHLEG+Q A+YYL +M KEFVAI AGSWYNF+KVAQYKQL
Sbjct: 112 KYKNKPWMLEDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQL 171
Query: 182 TLEEVEEKMKTGERLLMG 235
TLEE EEKMK + G
Sbjct: 172 TLEEAEEKMKNRRKTADG 189
>ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis]
gi|223530933|gb|EEF32792.1| tfiif-alpha, putative
[Ricinus communis]
Length = 584
Score = 122 bits (305), Expect(2) = 1e-55
Identities = 59/103 (57%), Positives = 74/103 (71%), Gaps = 3/103 (2%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVERDEKKD---GGSRGGCKKENDDEDEGNVSDK 378
++RRKT DGYERW+MK AN+G A F E+E+ + KD RG K DD+DEG +SDK
Sbjct: 225 KNRRKTADGYERWMMKAANNGPAAFGEMEKPDDKDVRTTSGRGRRKTAGDDDDEGKISDK 284
Query: 379 GGEDEEKEAHRKNRHELNKKDGDVDKEGPRGGEFDMNDDDIEK 507
G EDEE+E RKNR LN++ G D EGPRGG+ DM+DDD+EK
Sbjct: 285 GEEDEEEEMSRKNRLGLNRQGGGDDDEGPRGGDHDMDDDDVEK 327
Score = 121 bits (304), Expect(2) = 1e-55
Identities = 57/78 (73%), Positives = 65/78 (83%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSWYNFDKVAQYKQL 181
KFKNKPWLLEDET Q+Q+HGHLEG+Q A+YYL ++QGKEFVAI A SWYNF+KVAQYK L
Sbjct: 156 KFKNKPWLLEDETGQYQYHGHLEGSQSATYYLLILQGKEFVAIPAASWYNFNKVAQYKML 215
Query: 182 TLEEVEEKMKTGERLLMG 235
TLEE EEKMK + G
Sbjct: 216 TLEEAEEKMKNRRKTADG 233
>sp|Q9SU25.1|T2FA_ARATH RecName: Full=Transcription initiation factor IIF subunit alpha;
Short=TFIIF-alpha; AltName: Full=General transcription
factor IIF subunit 1; AltName: Full=Transcription
initiation factor RAP74 homolog; Short=AtRAP74
gi|5823572|emb|CAB53754.1| putative protein [Arabidopsis
thaliana] gi|7267963|emb|CAB78304.1| putative protein
[Arabidopsis thaliana]
Length = 649
Score = 120 bits (301), Expect(2) = 2e-54
Identities = 60/105 (57%), Positives = 78/105 (74%), Gaps = 5/105 (4%)
Frame = +1
Query: 208 EDRRKTVDGYERWVMKVANSGAATFVEVERDEKKDG----GSRGGCKKENDDEDEGNVSD 375
++RRKT DGY+RW+MK AN+G A F EV+ +++ G G RG K DE+EGNVSD
Sbjct: 179 KNRRKTADGYQRWMMKAANNGPALFGEVDNEKESGGTSGGGGRGRKKSSGGDEEEGNVSD 238
Query: 376 KGGEDEEKEAHRKNRHELNKK-DGDVDKEGPRGGEFDMNDDDIEK 507
+G EDEE+EA RK+R LN+K + D D+EGPRGG+ DM+DDDIEK
Sbjct: 239 RGDEDEEEEASRKSRLGLNRKSNDDDDEEGPRGGDLDMDDDDIEK 283
Score = 119 bits (299), Expect(2) = 2e-54
Identities = 57/78 (73%), Positives = 64/78 (82%)
Frame = +2
Query: 2 KFKNKPWLLEDETCQFQHHGHLEGAQCASYYL*MMQGKEFVAILAGSWYNFDKVAQYKQL 181
K KNKPW+LEDET QFQ+ GHLEG+Q A+YYL +MQ KEFVAI AGSWYNF+KVAQYKQL
Sbjct: 110 KLKNKPWILEDETGQFQYQGHLEGSQSATYYLLVMQNKEFVAIPAGSWYNFNKVAQYKQL 169
Query: 182 TLEEVEEKMKTGERLLMG 235
TLEE EEKMK + G
Sbjct: 170 TLEEAEEKMKNRRKTADG 187