BLASTX nr result

ID: Papaver25_contig00028911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00028911
         (531 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s...    57   4e-06
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s...    56   5e-06

>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
           vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 29/48 (60%), Positives = 32/48 (66%)
 Frame = -1

Query: 144 MFFLSLIEHTXXXXXXXXXXXXPEAIQGELEKLFVDKVITQLGLCISV 1
           MFFLSLIEHT             EAI+GELE LF+DKV+  LGLCISV
Sbjct: 1   MFFLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVLANLGLCISV 48


>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
           vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/48 (60%), Positives = 32/48 (66%)
 Frame = -1

Query: 144 MFFLSLIEHTXXXXXXXXXXXXPEAIQGELEKLFVDKVITQLGLCISV 1
           MF+LSLIEHT             EAI+GELE LF+DKVI  LGLCISV
Sbjct: 1   MFYLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVIANLGLCISV 48


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