BLASTX nr result
ID: Papaver25_contig00028506
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00028506
(987 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCH50966.1| T4.5 [Malus x robusta] 84 3e-19
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc... 91 7e-16
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 91 7e-16
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa... 91 9e-16
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [... 90 2e-15
gb|EEC80484.1| hypothetical protein OsI_22718 [Oryza sativa Indi... 90 2e-15
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 90 2e-15
emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera] 90 2e-15
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 89 2e-15
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 89 2e-15
gb|AAB82754.1| retrofit [Oryza longistaminata] 89 2e-15
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ... 89 3e-15
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera] 89 3e-15
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc... 89 4e-15
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 88 5e-15
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 88 5e-15
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera] 88 5e-15
gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subc... 88 5e-15
ref|XP_004301329.1| PREDICTED: uncharacterized protein LOC101296... 88 6e-15
gb|ABA95065.1| retrotransposon protein, putative, Ty1-copia subc... 88 6e-15
>emb|CCH50966.1| T4.5 [Malus x robusta]
Length = 1670
Score = 84.3 bits (207), Expect(2) = 3e-19
Identities = 69/267 (25%), Positives = 105/267 (39%), Gaps = 1/267 (0%)
Frame = +3
Query: 189 DPISDSELLVSVLRGLPSEYSSLCTSIRIRDPPVSFRNLYN*LLXXXXXXXXXKQTLMND 368
+P+S+S+L+ +L GLP EY S SI R+ V+ L+ LL K +
Sbjct: 414 EPLSESDLVAYILSGLPDEYESFVDSIETRNESVTADELHGLLLSKEISLQKRKTRASSS 473
Query: 369 ANSKVFL-ASSSSTQSNHNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPHNGFQSFG 545
+N+ A+ SST H PHN +
Sbjct: 474 SNAPFHAYAAQSSTHVGH-------FNKGNSRGRFHNRNRYTQNRNFGGNKPHNWHAN-- 524
Query: 546 TNNGFPGYNPSIVASSYPRMGQERPTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXXX 725
+ G G PS + CQ+C +YGH A + F+
Sbjct: 525 NSGGILGAGPSRQPAGPSSSSGCSVQCQLCLQYGHWAPMCNRLSQFAQS---------QS 575
Query: 726 XXXXXXXXGILGENPWYFDIGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGEGMFISYLGH 905
+ W D G ++H+T LN +PYSG D+L G+G+ IS+ G
Sbjct: 576 PTAMSAMTSSASPSYWLTDSGASHHVTPDPSALNSAIPYSGNDQLFVGDGKGLCISHTGS 635
Query: 906 SDVTVPNHKFRLHNILHVPQSSSNLNS 986
+ + + FRL+++L VPQ+S NL S
Sbjct: 636 ALIRTKHATFRLNDVLLVPQASHNLLS 662
Score = 38.5 bits (88), Expect(2) = 3e-19
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +2
Query: 11 VGSTTSKELWDTLQERYGSSSSTHAIQLRTKLQNLKLGXXXXXXXXXXXXKIRDYLVACG 190
+G S+ LW +L+ R+ +S TH LR+K+Q + G +I + L A G
Sbjct: 354 IGMEDSRSLWQSLERRFSGASRTHVHSLRSKIQTIHKGDSSMTDFLNSIKEISNKLAAAG 413
>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 90.9 bits (224), Expect = 7e-16
Identities = 71/267 (26%), Positives = 107/267 (40%), Gaps = 2/267 (0%)
Frame = +3
Query: 192 PISDSELLVSVLRGLPSEYSSLCTSIRI--RDPPVSFRNLYN*LLXXXXXXXXXKQTLMN 365
P+ + EL+ ++ GL SE+ + + R PVS ++Y+ LL + L
Sbjct: 167 PLDEEELVAYIINGLDSEFDAAVEGLMATARIAPVSISHVYSQLLSYENRIRIRQAYLTT 226
Query: 366 DANSKVFLASSSSTQSNHNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPHNGFQSFG 545
AN+ A+ + GF G
Sbjct: 227 SANA----ANRGGGRGGRGSSTGNRGGG------------------------RGGFGRGG 258
Query: 546 TNNGFPGYNPSIVASSYPRMGQERPTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXXX 725
G P S + R RP CQ+C K GH A++ R + SY
Sbjct: 259 RGRGAP----SGASQGRGRGNDTRPVCQVCHKRGHVASDCWHRYDDSY------VPDEKL 308
Query: 726 XXXXXXXXGILGENPWYFDIGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGEGMFISYLGH 905
GI + WY D G T+H+T Q+ L Y G D+++T+SGEGM I ++GH
Sbjct: 309 GGAATYAYGI--DTNWYVDTGATDHITGQLDKLTTKERYKGTDQIHTASGEGMSIKHVGH 366
Query: 906 SDVTVPNHKFRLHNILHVPQSSSNLNS 986
+ V P+ L N+LHVP+++ NL S
Sbjct: 367 AIVPTPSRPLHLKNVLHVPEAAKNLVS 393
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 90.9 bits (224), Expect = 7e-16
Identities = 70/267 (26%), Positives = 107/267 (40%), Gaps = 2/267 (0%)
Frame = +3
Query: 192 PISDSELLVSVLRGLPSEYSSLCTSIRI--RDPPVSFRNLYN*LLXXXXXXXXXKQTLMN 365
P+ + EL+ ++ GL SE+ + + R PVS ++Y+ LL + L
Sbjct: 158 PLDEEELVAYIINGLDSEFDAAVEGLMATARIAPVSISHVYSQLLSYENRIRIRQAYLTT 217
Query: 366 DANSKVFLASSSSTQSNHNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPHNGFQSFG 545
AN+ A+ + GF G
Sbjct: 218 SANA----ANRGGGRGGRGSSTGNRGGG------------------------RGGFGRGG 249
Query: 546 TNNGFPGYNPSIVASSYPRMGQERPTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXXX 725
G P S + R RP CQ+C K GH A++ R + SY
Sbjct: 250 HGRGAP----SGASQGRGRGNDTRPVCQVCHKRGHVASDCWHRYDDSY------VPDEKL 299
Query: 726 XXXXXXXXGILGENPWYFDIGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGEGMFISYLGH 905
G+ + WY D G T+H+T Q+ L Y G D+++T+SGEG I ++GH
Sbjct: 300 GGAATYAYGV--DTNWYVDTGATDHITGQLDKLTTKERYKGTDQIHTASGEGTSIKHVGH 357
Query: 906 SDVTVPNHKFRLHNILHVPQSSSNLNS 986
+ V P+H L N+LHVP+++ NL S
Sbjct: 358 AIVPTPSHPLHLKNVLHVPEAAKNLVS 384
>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31433472|gb|AAP54977.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1031
Score = 90.5 bits (223), Expect = 9e-16
Identities = 70/267 (26%), Positives = 107/267 (40%), Gaps = 2/267 (0%)
Frame = +3
Query: 192 PISDSELLVSVLRGLPSEYSSLCTSIRI--RDPPVSFRNLYN*LLXXXXXXXXXKQTLMN 365
P+ + EL+ ++ GL SE+ + + R PVS ++Y+ LL + L
Sbjct: 167 PLDEEELVAYIINGLDSEFDAAVEGLMATARIAPVSISHVYSQLLSYENRIRIRQAYLTT 226
Query: 366 DANSKVFLASSSSTQSNHNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPHNGFQSFG 545
AN+ A+ + GF G
Sbjct: 227 SANA----ANRGGGRGGRGSSTGNRGGR------------------------RGGFGRGG 258
Query: 546 TNNGFPGYNPSIVASSYPRMGQERPTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXXX 725
G P S + R RP CQ+C K GH A++ R + SY
Sbjct: 259 RGRGAP----SGASQGRGRGNDTRPVCQVCHKRGHVASDCWHRYDDSY------VPDEKL 308
Query: 726 XXXXXXXXGILGENPWYFDIGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGEGMFISYLGH 905
G+ + WY D G T+H+T Q+ L Y G D+++T+SGEGM I ++GH
Sbjct: 309 GGAATYAYGV--DTNWYVDTGATDHITGQLDKLTTKERYKGTDQIHTASGEGMSIKHVGH 366
Query: 906 SDVTVPNHKFRLHNILHVPQSSSNLNS 986
+ V P+ L N+LHVP+++ NL S
Sbjct: 367 AIVPTPSRPLHLKNVLHVPEAAKNLVS 393
>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group] gi|31431217|gb|AAP53032.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1042
Score = 89.7 bits (221), Expect = 2e-15
Identities = 48/133 (36%), Positives = 69/133 (51%)
Frame = +3
Query: 588 SSYPRMGQERPTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXXXXXXXXXXXGILGEN 767
SS R RP C +C+K GH AA R Y + P ++
Sbjct: 166 SSQQRGNDGRPLCHVCYKRGHVAANCWHR----YDEDYVPDDKLVAAATYSHG----ADS 217
Query: 768 PWYFDIGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGEGMFISYLGHSDVTVPNHKFRLHN 947
WY D G T+H+T+Q++ LN Y G D+++T+SG GM I ++GH+ V P L+N
Sbjct: 218 NWYVDTGATDHITSQLEKLNTREVYKGHDQIHTASGAGMKIKHIGHAIVHTPTRPLHLNN 277
Query: 948 ILHVPQSSSNLNS 986
+LHVPQ++ NL S
Sbjct: 278 VLHVPQAAKNLIS 290
>gb|EEC80484.1| hypothetical protein OsI_22718 [Oryza sativa Indica Group]
Length = 506
Score = 89.7 bits (221), Expect = 2e-15
Identities = 50/129 (38%), Positives = 68/129 (52%)
Frame = +3
Query: 600 RMGQERPTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXXXXXXXXXXXGILGENPWYF 779
R G +RP CQ+C K GH AAE R Y + P GI + WY
Sbjct: 262 RGGNDRPICQVCLKRGHVAAECWHR----YDETYVPDERSAAAAAAY---GI--DTNWYL 312
Query: 780 DIGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGEGMFISYLGHSDVTVPNHKFRLHNILHV 959
D G T+H+T ++ L+ + Y G DK++T+SG GM I ++G S + P + L NILHV
Sbjct: 313 DTGATDHITNELDKLDVWEKYKGGDKIHTASGAGMEIKHIGDSVIHTPTRELHLKNILHV 372
Query: 960 PQSSSNLNS 986
PQ+ NL S
Sbjct: 373 PQAKKNLIS 381
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 89.7 bits (221), Expect = 2e-15
Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 22/288 (7%)
Frame = +3
Query: 189 DPISDSELLVSVLRGLPSEYSSLCTSIRIRDPPVSFRNLYN*LLXXXXXXXXXKQTLMND 368
+P+S+ + ++++L GL S+Y+++ T+I IRD +S +++ LL + L
Sbjct: 172 EPVSEQDQVMNLLGGLGSDYNAVVTAINIRDDKISLEAIHSMLLAF-------EHRLEQQ 224
Query: 369 ANSKVFLASSSSTQSNHNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPHNGFQSFGT 548
++ + A+ +S+ +N G + F
Sbjct: 225 SSIEQMSANYASSSNNRG-----------------------------------GGRKFNG 249
Query: 549 NNGFPGYNPSIVASSYPRMGQ---------------ERPTCQICFKYGHSAAEYRQRGNF 683
G GY+P+ +Y G+ E+P CQ+C K+GH+A R +
Sbjct: 250 GRG-QGYSPNNNNYTYRGRGRGGRNGQGGRQNSSPSEKPQCQLCGKFGHTAQICYHRFDI 308
Query: 684 SYQGYFAPXXXXXXXXXXXXXXGILGE---NP----WYFDIGVTNHLTAQMQNLNHFVPY 842
S+QG ++ NP WY D G ++HLT + NL PY
Sbjct: 309 SFQGGQTTISHSLNNGNQNNIPAMVASASNNPADESWYLDSGASHHLTQNLGNLTSTSPY 368
Query: 843 SGPDKLNTSSGEGMFISYLGHSDVTVPNHKFRLHNILHVPQSSSNLNS 986
+G DK+ +G+ + IS +G + H FRL + HVP S+NL S
Sbjct: 369 TGTDKVTIGNGKHLSISNIGSKQLHSHTHSFRLKKVFHVPFISANLIS 416
>emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]
Length = 1272
Score = 89.7 bits (221), Expect = 2e-15
Identities = 66/268 (24%), Positives = 109/268 (40%), Gaps = 2/268 (0%)
Frame = +3
Query: 189 DPISDSELLVSVLRGLPSEYSSLCTSIRIRDPPVSFRNLYN*LLXXXXXXXXXKQTLMND 368
+P+ D + ++ +L GL +Y+S+ S+ R+ +S ++++ LL + +
Sbjct: 166 EPVKDRDHILQLLGGLGPDYNSIVASLTAREDDLSLHSVHSILLTHEQRLHLQHSSPTDP 225
Query: 369 ANSKVFLASSSSTQSN--HNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPHNGFQSF 542
+ + +AS S Q N H P P F
Sbjct: 226 SFASAHMASVPSRQPNRPHQPRHYNHSSRPQHQVSSSSNR------------PPTRFHPQ 273
Query: 543 GTNNGFPGYNPSIVASSYPRMGQERPTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXX 722
N P ++ A + P RP CQ+C K+GH+A + R + +YQG
Sbjct: 274 QPRNNHPIHS----AHNKPHHLSTRPQCQLCGKFGHTAIKCYHRFDINYQGNNGVPLAQA 329
Query: 723 XXXXXXXXXGILGENPWYFDIGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGEGMFISYLG 902
++ W+FD G T+HL+ Q L+ PYSG D++ G + I G
Sbjct: 330 PFSHAMLAAAPDHQDSWFFDTGATHHLSHXAQTLSCVQPYSGTDQVTIGDGNSLPILNTG 389
Query: 903 HSDVTVPNHKFRLHNILHVPQSSSNLNS 986
P+ F L+ +LHVP S+NL S
Sbjct: 390 TKSFFFPSKTFSLNQVLHVPHLSTNLIS 417
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 89.4 bits (220), Expect = 2e-15
Identities = 48/128 (37%), Positives = 73/128 (57%), Gaps = 1/128 (0%)
Frame = +3
Query: 606 GQER-PTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXXXXXXXXXXXGILGENPWYFD 782
GQ+R PTCQ+CFK GH+AA+ R + Y GI + WY D
Sbjct: 277 GQDRRPTCQVCFKRGHTAADCWYRFDEDYVA------DEKLVAAATNSYGI--DTNWYID 328
Query: 783 IGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGEGMFISYLGHSDVTVPNHKFRLHNILHVP 962
G T+H+T +++ L Y+G ++++T+SG GM IS++GH+ V P+ L+N+L+VP
Sbjct: 329 TGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIHLNNVLYVP 388
Query: 963 QSSSNLNS 986
Q+ NL S
Sbjct: 389 QAKKNLIS 396
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 89.4 bits (220), Expect = 2e-15
Identities = 48/128 (37%), Positives = 73/128 (57%), Gaps = 1/128 (0%)
Frame = +3
Query: 606 GQER-PTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXXXXXXXXXXXGILGENPWYFD 782
GQ+R PTCQ+CFK GH+AA+ R + Y GI + WY D
Sbjct: 277 GQDRRPTCQVCFKRGHTAADCWYRFDEDYVA------DEKLVAAATNSYGI--DTNWYID 328
Query: 783 IGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGEGMFISYLGHSDVTVPNHKFRLHNILHVP 962
G T+H+T +++ L Y+G ++++T+SG GM IS++GH+ V P+ L+N+L+VP
Sbjct: 329 TGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIHLNNVLYVP 388
Query: 963 QSSSNLNS 986
Q+ NL S
Sbjct: 389 QAKKNLIS 396
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 89.4 bits (220), Expect = 2e-15
Identities = 48/128 (37%), Positives = 73/128 (57%), Gaps = 1/128 (0%)
Frame = +3
Query: 606 GQER-PTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXXXXXXXXXXXGILGENPWYFD 782
GQ+R PTCQ+CFK GH+AA+ R + Y GI + WY D
Sbjct: 273 GQDRRPTCQVCFKRGHTAADCWYRFDEDYVA------DEKLVAAATNSYGI--DTNWYID 324
Query: 783 IGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGEGMFISYLGHSDVTVPNHKFRLHNILHVP 962
G T+H+T +++ L Y+G ++++T+SG GM IS++GH+ V P+ L+N+L+VP
Sbjct: 325 TGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIHLNNVLYVP 384
Query: 963 QSSSNLNS 986
Q+ NL S
Sbjct: 385 QAKKNLIS 392
>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
Length = 646
Score = 89.0 bits (219), Expect = 3e-15
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Frame = +3
Query: 615 RPTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXXXXXXXXXXX----GILGENPWYFD 782
RP CQIC K GH A E R + +Q + G+LGE PW+ D
Sbjct: 311 RPQCQICCKIGHVATECWHRFDNQFQPKASHSNQFSSSAQDPQALMAAPGLLGETPWFLD 370
Query: 783 IGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGEGMFISYLGHSDVTVPNHKFRLHNILHVP 962
G T+H+T+ + NL+ P+SG DK+ +G+G+++ + GHS + L N+LHVP
Sbjct: 371 TGATHHVTSDLANLSLHNPFSGDDKVIVGNGKGLYVLHTGHSSIPTSQGALLLKNVLHVP 430
Query: 963 QSSSNLNS 986
+ ++NL S
Sbjct: 431 KIAANLVS 438
>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
Length = 1131
Score = 89.0 bits (219), Expect = 3e-15
Identities = 64/268 (23%), Positives = 105/268 (39%), Gaps = 4/268 (1%)
Frame = +3
Query: 195 ISDSELLVSVLRGLPSEYSSLCTSIRIRDPPVSFRNLYN*LLXXXXXXXXXKQTLMNDAN 374
I++ + ++ +L GL +EY+S ++ R P+S +++ LL T +
Sbjct: 109 ITEQDRILYLLAGLRAEYNSFVITVTSRHEPLSLEEIHSMLLTHENRLEQQHTTEETNLL 168
Query: 375 SKVFLASSSSTQSNHNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPHNGFQSFGTNN 554
+ + N +N +FG
Sbjct: 169 QANITTMNIQGHNKKNQKSGQFKTQGRGNQNQQQFNHQNFGRGRGRGHYNNNGGNFGHGP 228
Query: 555 GFPGYNPSIVAS----SYPRMGQERPTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXX 722
G +N +S + +P CQ+C KYGH A R + +YQ
Sbjct: 229 GRGSFNNHSYSSRNFNNVSGGSNGKPQCQVCGKYGHIAINCYHRFDQTYQ-----PTMNN 283
Query: 723 XXXXXXXXXGILGENPWYFDIGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGEGMFISYLG 902
+G+ WY D G T+HLT + LN P++G DK+ +G + IS +G
Sbjct: 284 HLAAMVATPSTVGDESWYMDTGATHHLTPNLNKLNSHTPFAGSDKVMVGNGNRLNISNIG 343
Query: 903 HSDVTVPNHKFRLHNILHVPQSSSNLNS 986
HS ++ + L NILHVPQ ++NL S
Sbjct: 344 HSTISSVSRSLNLKNILHVPQLTTNLIS 371
>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 807
Score = 88.6 bits (218), Expect = 4e-15
Identities = 67/265 (25%), Positives = 112/265 (42%), Gaps = 1/265 (0%)
Frame = +3
Query: 195 ISDSELLVSVLRGLPSEYSSLCTSIRIRDPPVSFRNLYN*LLXXXXXXXXXKQTLMNDAN 374
+ + + + +L GL E+ S+ ++I ++ P+S +Y+ +L + L +
Sbjct: 120 LDEEDFIAYILNGLDGEFDSVVSAIGMKTEPISVMEVYSQVLNFEN-----RLKLRQEGT 174
Query: 375 SKVFLASSSSTQSNHNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPHNGFQSFGTNN 554
+ AS + NP FP G G N+
Sbjct: 175 ASAHAASRG--RGGFNPRAGGFSGGGGGGPGRGRGAPTGGAN-----FP--GGNGGGGNS 225
Query: 555 GFPGYNPSIVASSYPRMGQERPTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXXXXXX 734
GY P+ + R+ RP CQ+C+K GH AA+ R + +Y
Sbjct: 226 RGRGYTPARNRGNQQRV-DPRPICQVCYKRGHVAAKCWHRFDENY-------VPDERHVA 277
Query: 735 XXXXXGILGENPWYFDIGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGEGMFISYLGHSDV 914
+ WY D G T+H+T+++ L Y G +K++T++G GM I ++GH+ V
Sbjct: 278 AAAQAAYAVDTNWYIDSGATDHITSELDKLTVREKYKGTEKIHTANGVGMQIKHIGHALV 337
Query: 915 TVP-NHKFRLHNILHVPQSSSNLNS 986
P NH L N+LHVP ++ NL S
Sbjct: 338 HTPDNHTLHLKNVLHVPHATKNLIS 362
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 88.2 bits (217), Expect = 5e-15
Identities = 73/269 (27%), Positives = 114/269 (42%), Gaps = 4/269 (1%)
Frame = +3
Query: 192 PISDSELLVSVLRGLPSEYSSLCTSIRIRDPPVSFRNLYN*LLXXXXXXXXXK---QTLM 362
PI + EL+ ++ GL YS + +++ R P+S +LY+ +L + + +
Sbjct: 163 PIDEEELIQYIITGLGEGYSEVVSAVCARVEPISVSDLYSQVLNFEARQAIYRGAQEVTV 222
Query: 363 NDANSKVFLASSSSTQSNHNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPHNGFQSF 542
N AN F S + N N G
Sbjct: 223 NVANRGGF---SHGGRGNSNGGQGGSRGG-------------------------GGGGGH 254
Query: 543 GTNNGFPGYNPSIVASSYPRMGQERPTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXX 722
G NG G+ P +RP CQ+CFK GH+AA+ R Y + P
Sbjct: 255 GRGNGGGGHG----RGRTPGGVDKRPICQVCFKRGHTAADCWYR----YDEDYVPDAKHV 306
Query: 723 XXXXXXXXXGILGENPWYFDIGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGEGMFISYLG 902
G+ + WY D G T+H+T ++ L Y+G ++++T+SG GM IS++G
Sbjct: 307 AAAAVNSY-GV--DTNWYIDTGATDHVTGELDKLTMKEKYNGGEQIHTASGAGMDISHIG 363
Query: 903 HSDVTVPNHK-FRLHNILHVPQSSSNLNS 986
H+ V PN + L N+L+VPQ+ NL S
Sbjct: 364 HAIVHNPNSRNIHLRNVLYVPQAKKNLVS 392
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 88.2 bits (217), Expect = 5e-15
Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 1/128 (0%)
Frame = +3
Query: 606 GQER-PTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXXXXXXXXXXXGILGENPWYFD 782
GQ+R PTCQ+CFK GH+AA+ R + Y GI + WY D
Sbjct: 274 GQDRRPTCQVCFKRGHTAADCWYRFDEDYVA------DEKLAAAATNSYGI--DTNWYID 325
Query: 783 IGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGEGMFISYLGHSDVTVPNHKFRLHNILHVP 962
G T+H+T +++ L Y+G ++++T+SG GM IS++GH+ V P+ L+N+L+VP
Sbjct: 326 TGATDHITGELEKLTTKEKYNGNEQIHTASGAGMDISHIGHTTVHTPSRNIHLNNVLYVP 385
Query: 963 QSSSNLNS 986
Q+ +L S
Sbjct: 386 QAKKSLIS 393
>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
Length = 1334
Score = 88.2 bits (217), Expect = 5e-15
Identities = 68/268 (25%), Positives = 110/268 (41%), Gaps = 2/268 (0%)
Frame = +3
Query: 189 DPISDSELLVSVLRGLPSEYSSLCTSIRIRDPPVSFRNLYN*LLXXXXXXXXXKQTLMND 368
+P+ + + ++ +L GL +Y+S+ S+ R+ +S ++++ LL + +
Sbjct: 166 EPVKERDHILQLLGGLGPDYNSIVASLTAREDDLSLHSVHSILLTHEQRLHLQHSSPTDP 225
Query: 369 ANSKVFLASSSSTQSN--HNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPHNGFQSF 542
+ + +AS S Q N H P P F
Sbjct: 226 SFASAHMASXPSRQPNRPHQPRHYHHPSRPQHQASSSSNR------------PPTRFHPQ 273
Query: 543 GTNNGFPGYNPSIVASSYPRMGQERPTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXX 722
N P PS A + P RP CQ+C K+GH+A + R + +YQG
Sbjct: 274 QPRNNHP--IPS--AHNKPHHLSTRPQCQLCGKFGHTAIKCYHRFDINYQGNNGVPLAQA 329
Query: 723 XXXXXXXXXGILGENPWYFDIGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGEGMFISYLG 902
++ W+FD G T+HL+ Q L+ PYSG D++ G + I G
Sbjct: 330 PFSHAMXAAAPDHQDSWFFDTGATHHLSHSAQTLSCVQPYSGTDQVTIGDGNSLPILNTG 389
Query: 903 HSDVTVPNHKFRLHNILHVPQSSSNLNS 986
P+ F L+ +LHVP S+NL S
Sbjct: 390 TKSFFFPSKTFSLNQVLHVPHLSTNLIS 417
>gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1241
Score = 88.2 bits (217), Expect = 5e-15
Identities = 50/129 (38%), Positives = 67/129 (51%)
Frame = +3
Query: 600 RMGQERPTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXXXXXXXXXXXGILGENPWYF 779
R G +RP CQ+C K GH AAE R Y + P GI + WY
Sbjct: 262 RGGNDRPICQVCLKRGHVAAECWHR----YDETYVPDERSAAAAAAY---GI--DTNWYL 312
Query: 780 DIGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGEGMFISYLGHSDVTVPNHKFRLHNILHV 959
D G T+H+T ++ L+ Y G DK++T+SG GM I ++G S + P + L NILHV
Sbjct: 313 DTGATDHITNELDKLDVREKYKGGDKIHTASGAGMEIKHIGDSVIHTPTRELHLKNILHV 372
Query: 960 PQSSSNLNS 986
PQ+ NL S
Sbjct: 373 PQAKKNLIS 381
>ref|XP_004301329.1| PREDICTED: uncharacterized protein LOC101296391 [Fragaria vesca
subsp. vesca]
Length = 323
Score = 87.8 bits (216), Expect = 6e-15
Identities = 73/270 (27%), Positives = 110/270 (40%), Gaps = 5/270 (1%)
Frame = +3
Query: 192 PISDSELLVSVLRGLPSEYSSLCTSIRIRDPPVSFRNLYN*LLXXXXXXXXXKQTLMNDA 371
PISD++L+ ++ + Y + +S + RD P+++ +L LL +Q ++
Sbjct: 54 PISDNDLVSIIMNNVGPLYENTVSSAKARDTPITYESLEALLLSAERRIKDQQQAALD-- 111
Query: 372 NSKVFLASSSSTQSNHNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPHNGFQSFGTN 551
SS T + H FP N G
Sbjct: 112 -------VSSLTTAFHAAQISPRGGRGRGRGPPNYYTARNPTSNFGRGFPLNR----GRG 160
Query: 552 NGFPGYNPSIVASSYPRMGQERPTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXXXXX 731
G +PS SS Q RPTCQIC K GH+A + R N S+QG
Sbjct: 161 ASVLGPHPS---SSSLFNNQARPTCQICSKTGHTALDCYNRLNLSFQG--------RVPS 209
Query: 732 XXXXXXGILGENP----WYFDIGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGE-GMFISY 896
G P W D G +H+T+ + NL + Y G D++ E + IS+
Sbjct: 210 RNLSAMAASGSTPAPPTWLLDSGANSHITSDLGNLQNPKEYQGNDRVGGIGNETPLSISH 269
Query: 897 LGHSDVTVPNHKFRLHNILHVPQSSSNLNS 986
G + ++ P H F+LH+ILH P +S+NL S
Sbjct: 270 TGSTTLSTPTHTFKLHDILHCPSASTNLLS 299
>gb|ABA95065.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 825
Score = 87.8 bits (216), Expect = 6e-15
Identities = 47/128 (36%), Positives = 74/128 (57%), Gaps = 1/128 (0%)
Frame = +3
Query: 606 GQER-PTCQICFKYGHSAAEYRQRGNFSYQGYFAPXXXXXXXXXXXXXXGILGENPWYFD 782
GQ+R PTCQ+CFK GH+AA+ R + Y GI + WY D
Sbjct: 258 GQDRRPTCQVCFKRGHTAADCWYRFDEDYVA------DEKLVATATNSYGI--DTNWYID 309
Query: 783 IGVTNHLTAQMQNLNHFVPYSGPDKLNTSSGEGMFISYLGHSDVTVPNHKFRLHNILHVP 962
IG T+H+T +++ L+ Y+G ++++T+SG M IS++GH+ V P+ L+N+L+VP
Sbjct: 310 IGATDHITGELEKLSTKEKYNGSEQIHTASGASMDISHIGHTTVHTPSRNIPLNNVLYVP 369
Query: 963 QSSSNLNS 986
Q+ +L S
Sbjct: 370 QAKKSLVS 377