BLASTX nr result

ID: Papaver25_contig00028008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00028008
         (604 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612169.1| F-box family protein [Medicago truncatula] g...    58   2e-06
ref|XP_006447718.1| hypothetical protein CICLE_v10015458mg [Citr...    58   2e-06

>ref|XP_003612169.1| F-box family protein [Medicago truncatula]
            gi|355513504|gb|AES95127.1| F-box family protein
            [Medicago truncatula]
          Length = 1154

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
 Frame = -3

Query: 389  SVNGLLCLRTSRNDAFL-IYNPITGE--KSPWIEIKNKQARN------QISFGFDKQTNE 237
            S NGLLCL    ++  L I NP+TGE  K P   I     R+      Q+ FGF  +TNE
Sbjct: 857  SCNGLLCLCCPSDEHPLSICNPVTGEFIKLPEATINTHDERSPLNMRGQVGFGFQPKTNE 916

Query: 236  HKVICIXXXXXXXXXXXXXNQVNEVVEVFTVGKNTWRRIDAIPPIALGAGYDEKDPYYVD 57
            +KVI I             +++  V+E++T+G  +WR  +  P I++G+    + P  V+
Sbjct: 917  YKVIRIWGSDVKRGNRWVFDRM--VLEIYTLGTPSWRNAEVDPQISIGSNIWLRYPTCVN 974

Query: 56   GCIY 45
            G I+
Sbjct: 975  GTIH 978



 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
 Frame = -3

Query: 389 SVNGLLCLRTS-RNDAFLIYNPITGEKSPWIEIKNKQARNQI--------SFGFDKQTNE 237
           S NGLLCLR        +I NP+TGE     +       N I        +FGF  +TNE
Sbjct: 170 SCNGLLCLRHPFEGRPLVICNPVTGEFIRLPKATANLIHNDIVDKVSGIAAFGFQPKTNE 229

Query: 236 HKVICIXXXXXXXXXXXXXNQVNEVVEVFTVGKNTWRRIDAIPPIALGAGYDEKDPYYVD 57
           +KV+ I             + +  V+E+ T+G  +WR  +  P I++G+G     P YV+
Sbjct: 230 YKVMYIWDKYVRRGNGWVFDHI--VLEINTLGTPSWRNAEVDPQISIGSGLSLHYPTYVN 287

Query: 56  GCIY 45
           G ++
Sbjct: 288 GALH 291


>ref|XP_006447718.1| hypothetical protein CICLE_v10015458mg [Citrus clementina]
           gi|568830515|ref|XP_006469543.1| PREDICTED: F-box
           protein At3g07870-like [Citrus sinensis]
           gi|557550329|gb|ESR60958.1| hypothetical protein
           CICLE_v10015458mg [Citrus clementina]
          Length = 405

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
 Frame = -3

Query: 431 LDRGSYSRWTLPRQSVNGLLCLR--TSRNDAFLIYNPITGEKSPWIEIKNKQARNQI-SF 261
           L++G   R +L   S NGL+CL   + + D   ++NPI G+     + K K    +I  F
Sbjct: 111 LNQGDKERLSL-LSSCNGLICLHEFSYKQDVISVWNPILGDHLVLPQPKRKSVATRIRGF 169

Query: 260 GFDKQTNEHKVICIXXXXXXXXXXXXXNQVNEVVEVFTVGKNTWRRIDAIPPIALGAGYD 81
           G+++ TN++KVI I              QV    EV T+G NTWR I  +P       Y 
Sbjct: 170 GYNQSTNQYKVIQILSYKDQAAISSSKLQV----EVHTIGTNTWRNIGDLP-------YV 218

Query: 80  EKDPYY 63
              PYY
Sbjct: 219 LNQPYY 224


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