BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00027747
         (561 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007020667.1| DNA topoisomerase I alpha isoform 4, partial...    92   7e-17
ref|XP_007020666.1| DNA topoisomerase I alpha isoform 3 [Theobro...    92   7e-17
ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobro...    92   7e-17
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]                 92   1e-16
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]        91   2e-16
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g...    89   8e-16
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]              89   8e-16
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]                  89   1e-15
dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]                   86   5e-15
dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana]               86   5e-15
dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]                   86   5e-15
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]                85   1e-14
dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]                84   2e-14
ref|XP_002300344.1| DNA topoisomerase family protein [Populus tr...    82   7e-14
dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]                   82   7e-14
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v...    82   9e-14
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]              82   9e-14
dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea]                  80   3e-13
gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|g...    80   3e-13
ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform ...    80   4e-13

>ref|XP_007020667.1| DNA topoisomerase I alpha isoform 4, partial [Theobroma cacao]
           gi|508720295|gb|EOY12192.1| DNA topoisomerase I alpha
           isoform 4, partial [Theobroma cacao]
          Length = 733

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 69/187 (36%), Positives = 90/187 (48%), Gaps = 4/187 (2%)
 Frame = +3

Query: 12  KPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVQSPHVPSSS-KRSVEDSEDEGPL 188
           +PN D +D DD  PLSARL   ++   K  S +        VP +  K S ED +DE PL
Sbjct: 17  EPNSDDDDDDDSLPLSARLKGISNQGNKGASTSAPAQSRRLVPKTEVKVSAEDPDDEAPL 76

Query: 189 SSMINMKSGGEPSVKKEI---EEKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDSSTP 359
           S+  N+KS    S  +     E+KPLASK +QNGSI K  +Q NS+ L  KRPL   ++ 
Sbjct: 77  SARFNVKSNTGTSSSRLHDCDEKKPLASKIQQNGSIMKGKQQ-NSSTLSGKRPLDKGNSS 135

Query: 360 THSSAKKPKLXXXXXXXXXXXXXXXXXXXTXXXXXXXXXXVPIAERLKKAAVSAGTSQPK 539
            HSSAKKPK                               +PIA+R+KK+  S       
Sbjct: 136 DHSSAKKPK-----TSDAPTTMKTKQVTVKAEKADEDDDHMPIAQRMKKSTASNSKLSSM 190

Query: 540 KKTITKV 560
           K+  TKV
Sbjct: 191 KQKTTKV 197


>ref|XP_007020666.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
           gi|590606159|ref|XP_007020668.1| DNA topoisomerase I
           alpha isoform 3 [Theobroma cacao]
           gi|508720294|gb|EOY12191.1| DNA topoisomerase I alpha
           isoform 3 [Theobroma cacao] gi|508720296|gb|EOY12193.1|
           DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
          Length = 836

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 69/187 (36%), Positives = 90/187 (48%), Gaps = 4/187 (2%)
 Frame = +3

Query: 12  KPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVQSPHVPSSS-KRSVEDSEDEGPL 188
           +PN D +D DD  PLSARL   ++   K  S +        VP +  K S ED +DE PL
Sbjct: 144 EPNSDDDDDDDSLPLSARLKGISNQGNKGASTSAPAQSRRLVPKTEVKVSAEDPDDEAPL 203

Query: 189 SSMINMKSGGEPSVKKEI---EEKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDSSTP 359
           S+  N+KS    S  +     E+KPLASK +QNGSI K  +Q NS+ L  KRPL   ++ 
Sbjct: 204 SARFNVKSNTGTSSSRLHDCDEKKPLASKIQQNGSIMKGKQQ-NSSTLSGKRPLDKGNSS 262

Query: 360 THSSAKKPKLXXXXXXXXXXXXXXXXXXXTXXXXXXXXXXVPIAERLKKAAVSAGTSQPK 539
            HSSAKKPK                               +PIA+R+KK+  S       
Sbjct: 263 DHSSAKKPK-----TSDAPTTMKTKQVTVKAEKADEDDDHMPIAQRMKKSTASNSKLSSM 317

Query: 540 KKTITKV 560
           K+  TKV
Sbjct: 318 KQKTTKV 324


>ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
           gi|590606147|ref|XP_007020665.1| DNA topoisomerase I
           alpha isoform 1 [Theobroma cacao]
           gi|508720292|gb|EOY12189.1| DNA topoisomerase I alpha
           isoform 1 [Theobroma cacao] gi|508720293|gb|EOY12190.1|
           DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
          Length = 904

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 69/187 (36%), Positives = 90/187 (48%), Gaps = 4/187 (2%)
 Frame = +3

Query: 12  KPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVQSPHVPSSS-KRSVEDSEDEGPL 188
           +PN D +D DD  PLSARL   ++   K  S +        VP +  K S ED +DE PL
Sbjct: 144 EPNSDDDDDDDSLPLSARLKGISNQGNKGASTSAPAQSRRLVPKTEVKVSAEDPDDEAPL 203

Query: 189 SSMINMKSGGEPSVKKEI---EEKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDSSTP 359
           S+  N+KS    S  +     E+KPLASK +QNGSI K  +Q NS+ L  KRPL   ++ 
Sbjct: 204 SARFNVKSNTGTSSSRLHDCDEKKPLASKIQQNGSIMKGKQQ-NSSTLSGKRPLDKGNSS 262

Query: 360 THSSAKKPKLXXXXXXXXXXXXXXXXXXXTXXXXXXXXXXVPIAERLKKAAVSAGTSQPK 539
            HSSAKKPK                               +PIA+R+KK+  S       
Sbjct: 263 DHSSAKKPK-----TSDAPTTMKTKQVTVKAEKADEDDDHMPIAQRMKKSTASNSKLSSM 317

Query: 540 KKTITKV 560
           K+  TKV
Sbjct: 318 KQKTTKV 324


>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
          Length = 927

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 59/132 (44%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   PPAKPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVQSPHVPSSSKRSVEDSEDEG 182
           P AK N +SE SDD+KPLSAR     S+  KSN  N     S  +        EDSEDE 
Sbjct: 138 PAAKANSNSESSDDEKPLSARTF-GCSSKGKSNHANKEGGDSCSIRRRVIEESEDSEDEK 196

Query: 183 PLSSMINMKSGGEPSVKKEI---EEKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDSS 353
           PLS     KS    S  K     E+KPLA+K +QNGS+ ++     SA L NKRP G+  
Sbjct: 197 PLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSVSRDGPMNKSASLSNKRPPGEVK 256

Query: 354 TPTHSSAKKPKL 389
           +   SS KKPKL
Sbjct: 257 SLNQSSVKKPKL 268


>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
          Length = 925

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 59/132 (44%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   PPAKPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVQSPHVPSSSKRSVEDSEDEG 182
           P AK N +SE SDD+KPLSAR     S+  KSN  N     S  +        EDSEDE 
Sbjct: 138 PAAKANSNSESSDDEKPLSARTF-GCSSKGKSNHANKEGGDSCSIRRPVIEESEDSEDEK 196

Query: 183 PLSSMINMKSGGEPSVKKEI---EEKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDSS 353
           PLS     KS    S  K     E+KPLA+K +QNGS  ++     SA L NKRP G++ 
Sbjct: 197 PLSCRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSASLSNKRPPGEAK 256

Query: 354 TPTHSSAKKPKL 389
           +   SS KKPKL
Sbjct: 257 SLNQSSVKKPKL 268


>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
          Length = 920

 Score = 89.0 bits (219), Expect = 8e-16
 Identities = 59/132 (44%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   PPAKPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVQSPHVPSSSKRSVEDSEDEG 182
           P AK N +SE SDD+KPLSAR     S+  KSN  N     S  +        EDSEDE 
Sbjct: 139 PAAKANSNSESSDDEKPLSARTF-GCSSKGKSNHANKEGGDSCSIRRPVIEESEDSEDEK 197

Query: 183 PLSSMINMKSGGEPSVKKEI---EEKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDSS 353
           PLS     KS    S  K     E+KPLA+K + NGS  ++S    SA L NKRP G+  
Sbjct: 198 PLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDSPMNKSASLSNKRPPGEVK 257

Query: 354 TPTHSSAKKPKL 389
           +   SS KKPKL
Sbjct: 258 SLNQSSLKKPKL 269


>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
          Length = 920

 Score = 89.0 bits (219), Expect = 8e-16
 Identities = 59/132 (44%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   PPAKPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVQSPHVPSSSKRSVEDSEDEG 182
           P AK N +SE SDD+KPLSAR     S+  KSN  N     S  +        EDSEDE 
Sbjct: 139 PAAKANSNSESSDDEKPLSARTF-GCSSKGKSNHANKEGGDSCSIRRPVIEESEDSEDEK 197

Query: 183 PLSSMINMKSGGEPSVKKEI---EEKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDSS 353
           PLS     KS    S  K     E+KPLA+K + NGS  ++S    SA L NKRP G+  
Sbjct: 198 PLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDSPMNKSASLSNKRPPGEVK 257

Query: 354 TPTHSSAKKPKL 389
           +   SS KKPKL
Sbjct: 258 SLNQSSLKKPKL 269


>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
          Length = 910

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 67/182 (36%), Positives = 87/182 (47%), Gaps = 3/182 (1%)
 Frame = +3

Query: 24  DSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVQSPHVPSSSKRSVEDSEDEGPLSSMIN 203
           DSEDSDD KPLS R   S+S   K N++ V+K         SK   EDS+DE PLSS   
Sbjct: 162 DSEDSDDGKPLSLRHSASSS---KGNTNQVSK-------EGSKPENEDSDDEKPLSSRFP 211

Query: 204 MKSGGEPSVKKEIE---EKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDSSTPTHSSA 374
           +KSG   S  K  +   +KPLA K + NGS  ++ +    + + NKRP GD  +    S 
Sbjct: 212 LKSGVGESTSKAYDSDDDKPLAKKLQHNGSAMRDGQPNKYSNMSNKRPPGDIKSSNQLSV 271

Query: 375 KKPKLXXXXXXXXXXXXXXXXXXXTXXXXXXXXXXVPIAERLKKAAVSAGTSQPKKKTIT 554
           KKPKL                              +PI++R+KK+  S   S   KKT T
Sbjct: 272 KKPKLSSVTAPTNKKQASVKPEPKA---EDDDDDHLPISQRIKKSPTSESKSSSIKKT-T 327

Query: 555 KV 560
           KV
Sbjct: 328 KV 329


>dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]
          Length = 920

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 58/132 (43%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   PPAKPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVQSPHVPSSSKRSVEDSEDEG 182
           PPAK N +SE SDD+KPL AR     S+  KSN  N     S  +        EDSEDE 
Sbjct: 139 PPAKANSNSESSDDEKPLIARTS-GCSSKGKSNHANKEGGDSCSIRRPVVEESEDSEDEK 197

Query: 183 PLSSMINMKSGGEPSVKKEI---EEKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDSS 353
           PLS     KS    S  K     E+KPLA+K +QNGS  ++     SA L NKR  G+  
Sbjct: 198 PLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSASLSNKRAPGEVK 257

Query: 354 TPTHSSAKKPKL 389
           +   SS KKPKL
Sbjct: 258 SLNQSSLKKPKL 269


>dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana]
          Length = 920

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 58/132 (43%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   PPAKPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVQSPHVPSSSKRSVEDSEDEG 182
           PPAK N +SE SDD+KPL AR     S+  KSN  N     S  +        EDSEDE 
Sbjct: 139 PPAKANSNSESSDDEKPLIARTS-GCSSKGKSNHANKEGGDSCSIRRPVVEESEDSEDEK 197

Query: 183 PLSSMINMKSGGEPSVKKEI---EEKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDSS 353
           PLS     KS    S  K     E+KPLA+K +QNGS  ++     SA L NKR  G+  
Sbjct: 198 PLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSASLSNKRAPGEVK 257

Query: 354 TPTHSSAKKPKL 389
           +   SS KKPKL
Sbjct: 258 SLNQSSLKKPKL 269


>dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]
          Length = 926

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 58/132 (43%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   PPAKPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVQSPHVPSSSKRSVEDSEDEG 182
           PPAK N +SE SDD+KPL AR     S+  KSN  N     S  +        EDSEDE 
Sbjct: 139 PPAKANSNSESSDDEKPLIARTS-GCSSKGKSNHANKEGGDSCSIRRPVVEESEDSEDEK 197

Query: 183 PLSSMINMKSGGEPSVKKEI---EEKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDSS 353
           PLS     KS    S  K     E+KPLA+K +QNGS  ++     SA L NKR  G+  
Sbjct: 198 PLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSASLSNKRAPGEVK 257

Query: 354 TPTHSSAKKPKL 389
           +   SS KKPKL
Sbjct: 258 SLNQSSLKKPKL 269


>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
          Length = 894

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 70/196 (35%), Positives = 93/196 (47%), Gaps = 10/196 (5%)
 Frame = +3

Query: 3   PPAKPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVQSPHVPSSS-------KRSV 161
           P A+P  DSED   +KPLSARL    + L K +S+N  K      P+S         R  
Sbjct: 132 PAAEPYGDSED---EKPLSARLF---TGLTKGSSNNANKGLINSSPASLPVPKPEINRYS 185

Query: 162 EDSEDEGPLSSMINMKSGGEPSVKKEIEE---KPLASKAKQNGSIKKESEQLNSAKLLNK 332
           +DS+DE PLSS   +K+    S  K  E    K L S  +QNGSI + S+   S+  +NK
Sbjct: 186 DDSDDEIPLSSKFRLKANAGTSTVKSYESDDNKTLVSNFQQNGSINRGSK---SSIKVNK 242

Query: 333 RPLGDSSTPTHSSAKKPKLXXXXXXXXXXXXXXXXXXXTXXXXXXXXXXVPIAERLKKAA 512
           RPLG+  +   SS KKPKL                              VPI++R+KK+A
Sbjct: 243 RPLGEVKSSVQSSVKKPKLSDASTPVNNKQASKKAEPKA---DDSDDDHVPISQRMKKSA 299

Query: 513 VSAGTSQPKKKTITKV 560
            S   S   K+ +TKV
Sbjct: 300 TSGNKSSTAKQKVTKV 315


>dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]
          Length = 926

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 58/132 (43%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   PPAKPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVQSPHVPSSSKRSVEDSEDEG 182
           P AK N +SE SDD+KPL AR     S++ KSN  N     S  +        EDSEDE 
Sbjct: 139 PAAKANSNSESSDDEKPLIARTS-GCSSMGKSNHANKEGGDSCSIRRPVIEESEDSEDEK 197

Query: 183 PLSSMINMKSGGEPSVKKEI---EEKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDSS 353
           PLS     KS    S  K     E+KPLA+K +QNGS   E     SA L NKR  G+  
Sbjct: 198 PLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASPEGPMNKSASLSNKRAPGEVK 257

Query: 354 TPTHSSAKKPKL 389
           +   SS KKPKL
Sbjct: 258 SLNQSSLKKPKL 269


>ref|XP_002300344.1| DNA topoisomerase family protein [Populus trichocarpa]
           gi|222847602|gb|EEE85149.1| DNA topoisomerase family
           protein [Populus trichocarpa]
          Length = 877

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 66/186 (35%), Positives = 88/186 (47%), Gaps = 3/186 (1%)
 Frame = +3

Query: 12  KPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVQSPHVPSSSKRSVEDSEDEGPLS 191
           K  VD EDS+DDKPLS+R+  ST+ + K  +           P+  K    D +DE PLS
Sbjct: 129 KSIVDDEDSEDDKPLSSRIKGSTNNVNKGVT----------APAHVKDEPSD-DDEVPLS 177

Query: 192 SMINMKSGGEPSVKKEI---EEKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDSSTPT 362
           S   MKS    S  K I   E +P  SK++ NGS K + +Q  S+ +  KRP+ +     
Sbjct: 178 SRFAMKSNAGTSSSKSIRSSEIRPFPSKSQLNGSTKNDKQQ-KSSVVPTKRPMDNKVPSN 236

Query: 363 HSSAKKPKLXXXXXXXXXXXXXXXXXXXTXXXXXXXXXXVPIAERLKKAAVSAGTSQPKK 542
           HSSAKKPKL                              + I++R+KKA  SA  S   K
Sbjct: 237 HSSAKKPKLLDACTTTKVKQVTVKVEQKA-----DDDDHLTISQRMKKADSSANKSSFAK 291

Query: 543 KTITKV 560
           K +TKV
Sbjct: 292 KKVTKV 297


>dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]
          Length = 926

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 58/132 (43%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   PPAKPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVQSPHVPSSSKRSVEDSEDEG 182
           P AK N +SE SDD+KPL AR     S+  KSN  N     S  +        EDSEDE 
Sbjct: 139 PAAKANSNSESSDDEKPLIARTS-GCSSKGKSNHANKEGGDSCSIRRPVIEESEDSEDEK 197

Query: 183 PLSSMINMKSG-GEPSVKKEI--EEKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDSS 353
           PLS     KS  GE + K     E+KPLA+K +QNGS  ++     SA L NKR  G+  
Sbjct: 198 PLSRRFPSKSSLGESTSKSHDSDEKKPLAAKVQQNGSASRDGPMNKSASLSNKRAPGEVK 257

Query: 354 TPTHSSAKKPKL 389
           +   SS KKPKL
Sbjct: 258 SLNQSSLKKPKL 269


>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 883

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 56/133 (42%), Positives = 78/133 (58%), Gaps = 12/133 (9%)
 Frame = +3

Query: 27  SEDSDDDKPLSARLLV------STSALQKS---NSHNVAKVQSPHVPSSSKRSVEDSEDE 179
           S+DS+D+ PL  +L +      S+S L  S   +S   ++ QS     ++K   +DSEDE
Sbjct: 114 SDDSEDEIPLLLKLQLKSRKGASSSKLLDSKGLSSPASSRPQSQKAKVNNKNLSDDSEDE 173

Query: 180 GPLSSMINMKSGGEPSVKKEI---EEKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDS 350
            PLSS   +K+G   S+ K     E+KPL S  K NG  KK+ E++ S K  NKRPLG +
Sbjct: 174 IPLSSKFRLKTGMGASLDKLDNFDEKKPLTSTLKPNGISKKDDERVKSPKGQNKRPLGQA 233

Query: 351 STPTHSSAKKPKL 389
           +T  HSS+KKPKL
Sbjct: 234 NTSHHSSSKKPKL 246



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
 Frame = +3

Query: 6   PAKPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVQSPHVPSSS-----KRSVEDS 170
           P   N +SEDS+DDKPLSA+L   ++ L K NSH +  + SP + S       K+S  DS
Sbjct: 9   PPVANGESEDSEDDKPLSAKL---SARLPKGNSHVLKGLSSPVLQSQKTKVDVKKSDGDS 65

Query: 171 EDEGPLSSMINMKSGGEPSVKKEIEEKPLAS 263
           EDE PLSS   +K+    S  K +  K L S
Sbjct: 66  EDEVPLSSKFPLKTYVRSSSGKSLGSKGLNS 96


>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
          Length = 926

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 57/132 (43%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   PPAKPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVQSPHVPSSSKRSVEDSEDEG 182
           P AK N +SE SDD+KPL AR     S+  KSN  N     S  +        EDSEDE 
Sbjct: 139 PAAKANSNSESSDDEKPLIARTS-GCSSKGKSNHANKEGGDSCSIRRPVIEESEDSEDEK 197

Query: 183 PLSSMINMKSGGEPSVKKEI---EEKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDSS 353
           PLS     KS    S  K     E+KPLA+K +QNGS  ++     SA LLNKR  G+  
Sbjct: 198 PLSRRFPSKSSLGESTSKSYDSDEKKPLATKVQQNGSASRDGPMNKSASLLNKRAPGEVK 257

Query: 354 TPTHSSAKKPKL 389
           +   SS KK KL
Sbjct: 258 SLNQSSLKKAKL 269


>dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea]
          Length = 920

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 56/132 (42%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   PPAKPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVQSPHVPSSSKRSVEDSEDEG 182
           P AK N +SE SDD+KPL AR     S+  KSN  N     S  +        EDSEDE 
Sbjct: 139 PAAKANSNSESSDDEKPLIARTS-GCSSKGKSNHANKEGGDSCSIRRPVIEESEDSEDEK 197

Query: 183 PLSSMINMKSGGEPSVKKEI---EEKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDSS 353
           PLS     KS    S  K     E+KPLA+K + NGS  ++     SA L NKR  G+  
Sbjct: 198 PLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDGPMNKSASLSNKRAPGEVK 257

Query: 354 TPTHSSAKKPKL 389
           +   SS KKPKL
Sbjct: 258 SLNQSSLKKPKL 269


>gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|gb|AAK69776.1|
           topoisomerase I [Nicotiana tabacum]
          Length = 852

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 66/188 (35%), Positives = 85/188 (45%), Gaps = 2/188 (1%)
 Frame = +3

Query: 3   PPAKPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKV--QSPHVPSSSKRSVEDSED 176
           P ++PN ++EDS+DDKPLSARL   +S L KSNS +  KV   S  V  S     EDS+D
Sbjct: 132 PKSEPNDEAEDSEDDKPLSARL---SSGLSKSNSSHANKVLGTSASVQKSRPPKKEDSDD 188

Query: 177 EGPLSSMINMKSGGEPSVKKEIEEKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDSST 356
           E PL+S   +KS    S  K    + +  K +QNG        L S  +L+KRP GD S 
Sbjct: 189 EIPLASRFQLKSNAGASTSKSSNSEEVKPKIRQNG--------LPSTTVLSKRPPGDVSL 240

Query: 357 PTHSSAKKPKLXXXXXXXXXXXXXXXXXXXTXXXXXXXXXXVPIAERLKKAAVSAGTSQP 536
                 K                       T          VPI++R+KK+  SA     
Sbjct: 241 LLRLQLKSLGFLMHLHLFRVSEASVKPEKKT----EDDDDDVPISQRIKKSVASASKLSS 296

Query: 537 KKKTITKV 560
            KK  TKV
Sbjct: 297 AKKA-TKV 303


>ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
           gi|568842074|ref|XP_006474978.1| PREDICTED: DNA
           topoisomerase 1-like isoform X2 [Citrus sinensis]
           gi|568842076|ref|XP_006474979.1| PREDICTED: DNA
           topoisomerase 1-like isoform X3 [Citrus sinensis]
           gi|568842078|ref|XP_006474980.1| PREDICTED: DNA
           topoisomerase 1-like isoform X4 [Citrus sinensis]
          Length = 902

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 56/130 (43%), Positives = 72/130 (55%), Gaps = 8/130 (6%)
 Frame = +3

Query: 24  DSEDSDDDKPLSARLLVSTSALQKSNSHNV------AKVQSPHVPSSSKRSVEDSEDEGP 185
           D  DS+DDKPLSARL        K NS NV      +K  +     + K   EDS+DE P
Sbjct: 149 DDNDSEDDKPLSARL--------KGNSKNVNQGIGASKADAAISEVNVKTDPEDSDDEVP 200

Query: 186 LSSMINMKSGGEPSVKK--EIEEKPLASKAKQNGSIKKESEQLNSAKLLNKRPLGDSSTP 359
           LSS     + G    K     E+KPLASK +QNGS  +E++Q  S+ +  KRPL  +S+ 
Sbjct: 201 LSSRFPKSNAGTSGAKPIDSDEKKPLASKVQQNGSTSRETQQ-KSSSVPVKRPLQKASSS 259

Query: 360 THSSAKKPKL 389
             SSAKKPK+
Sbjct: 260 GASSAKKPKV 269