BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00025505
         (652 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   129   1e-27
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   105   9e-21
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]               98   2e-18
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]               98   2e-18
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]               94   3e-17
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                   93   6e-17
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]               93   6e-17
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]    87   5e-15
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]    87   5e-15
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                              86   8e-15
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]      83   7e-14
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]         82   1e-13
gb|AFB73911.1| polyprotein [Citrus sinensis]                           81   2e-13
gb|AFB73912.1| polyprotein [Citrus sinensis]                           80   6e-13
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    79   2e-12
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...    76   8e-12
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...    76   8e-12
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]            75   2e-11
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...    75   2e-11
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...    75   2e-11

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  129 bits (323), Expect = 1e-27
 Identities = 78/217 (35%), Positives = 109/217 (50%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAWYHVSENKLDSRAXXXXXXXXXXXXXXXXXWNPVE 180
            KTP+E W GKPA DYDS+H+FG  A+YHV E+KLD RA                 W    
Sbjct: 621  KTPLEVWSGKPATDYDSLHVFGSIAYYHVIESKLDPRAKKALFMGFSPGVKGYRLWCLEA 680

Query: 181  KKIVMSRDVTFDEMSMVKSWGYRQVEDRSTNTSEPLQ*VEIDATPLIPAKSVSVKNTSED 360
            KK ++SRDVTFDE +M+K       +          + VE +   +IP ++ +  +   +
Sbjct: 681  KKTIISRDVTFDESAMLKKVNPEGADSTPQQVECARKQVEFEPKVVIPTRNTTSDSAMAE 740

Query: 361  IESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKPGWMNDYIAYAL 540
             ES  E   EVP                     +  IA  + RR  +KP    D +AYAL
Sbjct: 741  EESDEE---EVPTQESQQQ--------------SAPIAVRRQRRDIQKPSRFMDMVAYAL 783

Query: 541  PVIEDGTPTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
            PV++D  P++Y E + S+E   W GAM++EM+SL KN
Sbjct: 784  PVVDD-IPSTYPEAIMSSESGNWAGAMEEEMQSLKKN 819


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  105 bits (263), Expect = 9e-21
 Identities = 74/223 (33%), Positives = 110/223 (49%), Gaps = 6/223 (2%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAWYHVSENKLDSRAXXXXXXXXXXXXXXXXXWNPVE 180
            KTPME W GK A DY ++  FGC A+YHVSE KL+ RA                 W+P E
Sbjct: 621  KTPMEMWSGKAA-DYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGYGDGVKGFRIWSPAE 679

Query: 181  KKIVMSRDVTFDEMSMVKSWGYRQVEDRSTNTSEPLQ*VEIDATPLIPAKSVSVKNTSED 360
            K+++MSR+V FDE  ++++        + T TSE     +     +I  +S   +   ED
Sbjct: 680  KRVIMSRNVVFDESPLLRT------IVKPTTTSETGSLDKQVEFQVIQNESDLKEPEEED 733

Query: 361  IESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKPG---WMNDYIA 531
             E   E  T++P                  + + ++IA  +PRR   +P       D + 
Sbjct: 734  QEPQTE--TDIPES--------------MPSDIHQSIAQDRPRRVGVRPPTRYGFEDMVG 777

Query: 532  YALPVIED---GTPTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
            YAL V E+     P++Y E + S++ ++W  AM DEMESL+KN
Sbjct: 778  YALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKN 820


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 8/225 (3%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAW--YHVSEN-KLDSRAXXXXXXXXXXXXXXXXXWN 171
            KTPME W GKP  DY S+H+FGCP +  Y+  E  KLD ++                 W+
Sbjct: 632  KTPMEMWKGKPV-DYSSLHVFGCPVYVMYNSQEKTKLDPKSRKCIFLGYADNVKGYRLWD 690

Query: 172  PVEKKIVMSRDVTFDEMSMVKSWGYRQVEDRSTNTSEPLQ*VEIDATPLIPAKSVSVKNT 351
            P  +K+V+SRDV F E  +       Q E ++ +TS+         T ++  +  S ++ 
Sbjct: 691  PTARKVVVSRDVVFAENEL-------QSEQKNDSTSKE--------TAIVQMEEKSKESD 735

Query: 352  SEDIESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKPGWMNDYI- 528
            S + ES  E   + P+D                  V + +  S   R T+KP W +DY+ 
Sbjct: 736  SSEAESVHE--EQEPDD------------------VNDGVRRST--RQTQKPSWQSDYVM 773

Query: 529  ----AYALPVIEDGTPTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
                AY L + E+G P+++ E ++ ++  +W  AM +EME+L++N
Sbjct: 774  TSHDAYCL-ITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRN 817


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 8/225 (3%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAW--YHVSEN-KLDSRAXXXXXXXXXXXXXXXXXWN 171
            KTPME W GKP  DY S+H+FGCP +  Y+  E  KLD ++                 W+
Sbjct: 632  KTPMEMWKGKPV-DYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWD 690

Query: 172  PVEKKIVMSRDVTFDEMSMVKSWGYRQVEDRSTNTSEPLQ*VEIDATPLIPAKSVSVKNT 351
            P  +K+V+SRDV F E  +       Q E ++ +TS+         T ++  +  S ++ 
Sbjct: 691  PTARKVVVSRDVVFAENEL-------QSEQKNDSTSKE--------TAIVQMEEKSKESD 735

Query: 352  SEDIESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKPGWMNDYI- 528
            S + ES  E   + P+D                  V + +  S   R T+KP W +DY+ 
Sbjct: 736  SSEAESVHE--EQEPDD------------------VNDGVRRST--RQTQKPSWQSDYVM 773

Query: 529  ----AYALPVIEDGTPTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
                AY L + E+G P+++ E ++ ++  +W  AM +EME+L++N
Sbjct: 774  TSHDAYCL-ITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRN 817


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 8/225 (3%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAW--YHVSEN-KLDSRAXXXXXXXXXXXXXXXXXWN 171
            KTPME W GKP  DY S+H+FGCP +  Y+  E  KLD ++                 W+
Sbjct: 632  KTPMEMWKGKPV-DYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWD 690

Query: 172  PVEKKIVMSRDVTFDEMSMVKSWGYRQVEDRSTNTSEPLQ*VEIDATPLIPAKSVSVKNT 351
            P  +K+V+SRDV F E  +       Q + ++ +TS+         T ++  +  S ++ 
Sbjct: 691  PTARKVVVSRDVVFAENEL-------QSKQKNDSTSKE--------TAIVQMEEKSKESD 735

Query: 352  SEDIESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKPGWMNDYI- 528
            S + E   E   + P+D                          +  R T+KP W +DY+ 
Sbjct: 736  SSEAEPVHE--EQEPDDVNN--------------------GVRRSTRQTQKPSWQSDYVM 773

Query: 529  ----AYALPVIEDGTPTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
                AY L + E+G P+++ E ++ ++  +W  AM +EME+L++N
Sbjct: 774  TSHDAYCL-ITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRN 817


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 11/228 (4%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAW--YHVSEN-KLDSRAXXXXXXXXXXXXXXXXXWN 171
            KTPME W GKP  DY S+ +FGCP +  Y+  E  KLD ++                 W+
Sbjct: 632  KTPMEMWKGKPG-DYSSLRVFGCPVYVMYNSQERTKLDPKSRRCTFLGYADNVKGYRLWD 690

Query: 172  PVEKKIVMSRDVTFDEMSMVKSWGYRQVEDRSTNTSEPLQ*VEIDATPLIPAKSVSVKNT 351
            P  +KI +SRDV F E  + K       E ++  T++    VEI+            K+ 
Sbjct: 691  PTARKIFVSRDVIFVENELQK-------EQKNDGTTKETATVEIEE-----------KSG 732

Query: 352  SEDIESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTR---KPGWMND 522
             E+ E+  E   + PN+                      +  ++PRR+TR   KP W ++
Sbjct: 733  EENSEAEPEHEEQEPNE----------------------VNDAEPRRTTRQIRKPSWHSE 770

Query: 523  YI-----AYALPVIEDGTPTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
            Y+     AY L + EDG P+++ E V+ ++   W  AMQ+E+E+L++N
Sbjct: 771  YVMASHDAYCL-LSEDGEPSTFHEAVNGSDASLWMAAMQEEIEALHRN 817


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 8/225 (3%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAW--YHVSEN-KLDSRAXXXXXXXXXXXXXXXXXWN 171
            KTPME W GKP  DY S+H+FGCP +  Y+  E  KLD ++                 W+
Sbjct: 632  KTPMEMWKGKPV-DYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWD 690

Query: 172  PVEKKIVMSRDVTFDEMSMVKSWGYRQVEDRSTNTSEPLQ*VEIDATPLIPAKSVSVKNT 351
            P  +K+V+SRDV F E  +       Q E ++ +T +         T ++  +  S ++ 
Sbjct: 691  PTARKVVVSRDVVFAENEL-------QSEQKNDSTFKE--------TAILQIEEKSKESD 735

Query: 352  SEDIESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKPGWMNDYI- 528
            S + ES  E   + P+D                          +  R T+KP W +DY+ 
Sbjct: 736  SSEAESVHE--EQEPDDVNN--------------------GVRRSTRQTQKPSWQSDYVM 773

Query: 529  ----AYALPVIEDGTPTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
                AY L + E+G P+++ E ++ ++  +W  A+ +EME+L KN
Sbjct: 774  TGHDAYCL-IAEEGEPSTFHEALNGSDASQWMTAIHEEMEALRKN 817


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 70/231 (30%), Positives = 107/231 (46%), Gaps = 14/231 (6%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAWYHVSENKLDSRAXXXXXXXXXXXXXXXXXWNPVE 180
            KTP E W GKP+ +Y  + IFGCPA+ HVS+ KL+ RA                 W   +
Sbjct: 742  KTPQEVWSGKPS-NYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTED 800

Query: 181  K--KIVMSRDVTFDEMSMVKSWGYRQVEDRSTNTSEPLQ*VEIDATPLIPAK-SVSVKNT 351
            +  K ++SRDVTFDE +M   +G R+       TS+     ++ A   +  +    ++N 
Sbjct: 801  RTPKFIISRDVTFDESAM---FGQRKEFGDLAGTSK----TDLGANQKVEFEVDAPMENG 853

Query: 352  SEDIESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKP-------- 507
             +D    + V  +  ND                   +++IA  +PRR  R+P        
Sbjct: 854  VDDTSEEQPVIDQ--ND-------------------SQSIAAHRPRREIRRPMRYVDCVS 892

Query: 508  GWMNDYIAYALPVIED---GTPTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
              + + +A+AL V E+     P SY E + S + K+W  +M DEM SL KN
Sbjct: 893  ANITNPVAFALAVAEEIGREEPRSYKEAMESKDSKKWLSSMDDEMASLRKN 943


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 70/231 (30%), Positives = 107/231 (46%), Gaps = 14/231 (6%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAWYHVSENKLDSRAXXXXXXXXXXXXXXXXXWNPVE 180
            KTP E W GKP+ +Y  + IFGCPA+ HVS+ KL+ RA                 W   +
Sbjct: 955  KTPQEVWSGKPS-NYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTED 1013

Query: 181  K--KIVMSRDVTFDEMSMVKSWGYRQVEDRSTNTSEPLQ*VEIDATPLIPAK-SVSVKNT 351
            +  K ++SRDVTFDE +M   +G R+       TS+     ++ A   +  +    ++N 
Sbjct: 1014 RTPKFIISRDVTFDESAM---FGQRKEFGDLAGTSK----TDLGANQKVEFEVDAPMENG 1066

Query: 352  SEDIESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKP-------- 507
             +D    + V  +  ND                   +++IA  +PRR  R+P        
Sbjct: 1067 VDDTSEEQPVIDQ--ND-------------------SQSIAAXRPRREIRRPMRYVDCVS 1105

Query: 508  GWMNDYIAYALPVIED---GTPTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
              + + +A+AL V E+     P SY E + S + K+W  +M DEM SL KN
Sbjct: 1106 ANITNPVAFALAVAEEIGREEPRSYKEAMESKDSKKWLSSMDDEMASLRKN 1156


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCP--AWYHVSE-NKLDSRAXXXXXXXXXXXXXXXXXWN 171
            KTPME W GKP  DY ++HIFG    A Y+  E  KLD ++                 W+
Sbjct: 622  KTPMEMWTGKPV-DYSNLHIFGSIVYAMYNAQEITKLDPKSRKCRFLGYADGVKGYRLWD 680

Query: 172  PVEKKIVMSRDVTFDEMSMVKSWGYRQVEDRSTNTSEPLQ*VEIDATPLIPAKSVSVKNT 351
            P   K+V+SRDV F E  + +     +V+D ST   +P                + V+  
Sbjct: 681  PTAHKVVISRDVIFVEDRLQRG----EVDD-STEKEKP------------ETTQIQVEEE 723

Query: 352  SEDIESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKPGWMNDY-- 525
             E   S  E   E P                     +    T +  R  R+P W +DY  
Sbjct: 724  FEQDSSEAEPAHEEPEPES-----------------SGAPTTRQSDREKRRPTWHSDYVM 766

Query: 526  ---IAYALPVIEDGTPTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
               +AY L + EDG P+++ E ++S++  +W  AMQ+E+E+L+KN
Sbjct: 767  EGNVAYCL-LTEDGEPSTFQEAINSSDVSQWTAAMQEEIEALHKN 810


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 66/225 (29%), Positives = 98/225 (43%), Gaps = 8/225 (3%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAWYHVSENKLDSRAXXXXXXXXXXXXXXXXXWNPVE 180
            KTP+E W G PA +Y  + +FGC A+ HV   KL+ R                  W P  
Sbjct: 552  KTPIEVWSGSPA-NYSDLRVFGCTAYAHVDNGKLEPRVIKCIFLGYLSGVKGYKLWCPET 610

Query: 181  KKIVMSRDVTFDEMSMVKSWGYRQVEDRSTNTS-EPLQ*VEIDATPLIPAKSVSVKNTSE 357
            KK+V+SR+V F E  M+        +  STN   E  + V +    LI +     K   E
Sbjct: 611  KKVVISRNVVFHESIMLH-------DKPSTNVPVESQEKVSVQVEHLISSGHAPEK---E 660

Query: 358  DIESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKPGWMND---YI 528
            D+   ++      +D                 +   +IA  +P+R+T+ P    +    +
Sbjct: 661  DVAINQDAPVIEDSDSSIVQQ-----------SPKRSIAKDRPKRNTKPPRRYIEEANIV 709

Query: 529  AYALPVIED----GTPTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
            AYAL V E+      P++Y + + S +   W  AM DEMESL KN
Sbjct: 710  AYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEMESLEKN 754


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 13/230 (5%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAWYHVSENKLDSRAXXXXXXXXXXXXXXXXXWNPVE 180
            KTP E W GKPA +Y ++ +FGCPA+ H+++ KL++RA                 W   +
Sbjct: 633  KTPEELWNGKPA-NYQNLRVFGCPAYLHINQGKLEARALKGVFVGYPDGVKGYKIWCKDQ 691

Query: 181  KKIVMSRDVTFDEMSMVKSWGYRQV---EDRSTNTSEPLQ*VEIDATPLIPAKSVSVKNT 351
             K ++SRDV F E  ++K          ++ + N     +  +++   L+  KS   +  
Sbjct: 692  GKCIVSRDVVFHESVLLKESAEHDAGLQDNPAANKRSGSETSKVN-VELLTDKSSEKEAA 750

Query: 352  SED----IESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKP---G 510
            S+D     ES     +E+P                        +A  + RR  R P   G
Sbjct: 751  SDDERATAESEEHEVSELPQADLQ----------------NYQLARDRVRREVRAPVRYG 794

Query: 511  WMNDYIAYALPVIEDGT---PTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
            +  D IAYAL   ++ T   P ++ E + S    +W  AMQDEMESL +N
Sbjct: 795  YA-DLIAYALLCADEVTIEEPANFSEAMESVHCDKWLEAMQDEMESLQRN 843


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 8/225 (3%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAW--YHVSEN-KLDSRAXXXXXXXXXXXXXXXXXWN 171
            KT ME W GKPA DY  +H FGCP +  Y+  E  KLD+++                 W+
Sbjct: 632  KTAMEMWTGKPA-DYSYLHAFGCPMYVMYNAQERTKLDAKSRRCIFLGYADGVKGYRLWD 690

Query: 172  PVEKKIVMSRDVTFDEMSMVKSWGYRQVEDRSTNTSEPLQ*VEIDATPLIPAKSVSVKNT 351
            P   KIV+SRDV F E  + +  G    +D +         V ++  P            
Sbjct: 691  PTAHKIVISRDVIFVEDQLQRKDG----DDGTVKEKSETVPVYVENNP----------EN 736

Query: 352  SEDIESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKPGWMNDY-- 525
            S+  E+  E   + P +                   +E     +  R  R P W ++Y  
Sbjct: 737  SDSSEAAPEHEEQEPVE-------------------SEAPEVRRSTRERRPPTWHSEYVT 777

Query: 526  ---IAYALPVIEDGTPTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
               +AY L + EDG P+++ E ++S++   W  AMQ+E+E+L+KN
Sbjct: 778  EINVAYCL-LTEDGEPSTFHEALNSSDVALWMTAMQEEIEALHKN 821


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 8/225 (3%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAW--YHVSEN-KLDSRAXXXXXXXXXXXXXXXXXWN 171
            KT ME W GKPA DY  +H FGCP +  Y+  E  KLD ++                 W+
Sbjct: 632  KTAMEMWTGKPA-DYSYLHAFGCPVYVMYNAQERTKLDPKSRKCIFLGYADGVKGYRLWD 690

Query: 172  PVEKKIVMSRDVTFDEMSMVKSWGYRQVEDRSTNTSEPLQ*VEIDATPLIPAKSVSVKNT 351
            P   KIV+SRDV F E  + +  G    +D +         V ++  P            
Sbjct: 691  PTAHKIVISRDVIFVEDQLQRKDG----DDGTVKEKSETVPVYVENNP----------EN 736

Query: 352  SEDIESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKPGWMNDY-- 525
            S+  E+  E   + P +                   +E     +  R  R P W ++Y  
Sbjct: 737  SDSSEAAPEHEEQEPVE-------------------SEAPEVRRSTRERRPPTWHSEYVT 777

Query: 526  ---IAYALPVIEDGTPTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
               +AY L + EDG P+++ E ++S +   W  AMQ+E+E+L+KN
Sbjct: 778  EINVAYCL-LTEDGEPSTFHEALNSLDVALWMTAMQEEIEALHKN 821


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 68/224 (30%), Positives = 98/224 (43%), Gaps = 7/224 (3%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAWYHVSENKLDSRAXXXXXXXXXXXXXXXXXWNPVE 180
            KTP EKW GK A DY  + +FGC A+ H   +KL+ RA                 W   +
Sbjct: 601  KTPQEKWTGKAA-DYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGYPKGVKGYKLWIETQ 659

Query: 181  KK--IVMSRDVTFDEMSMVKSWGYRQVEDRSTNTSEPLQ*VEIDATPLIPAKSVSVKNTS 354
             K   ++SRDVTF+E  M K    + VE       + LQ  E++   L P KS   K TS
Sbjct: 660  GKGKCIISRDVTFNEQDMSKQTPAKDVEGL-----DQLQ-FEVEHETLQPEKS---KETS 710

Query: 355  EDIESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKPGWMN--DYI 528
                +  E+  E  N+                   +  +   + +R  + P      +  
Sbjct: 711  SKT-AQEEIVHERQNEPTQGLE-------------SYNLVRDRQKRQVKPPKRYGQAEMT 756

Query: 529  AYALPVIE---DGTPTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
            A+AL V E   D  P +Y E ++S E  +W  A+Q+EM+SL KN
Sbjct: 757  AFALSVAEEIVDMEPKTYQEAINSNEADQWVKAIQEEMDSLRKN 800


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1278

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 72/230 (31%), Positives = 92/230 (40%), Gaps = 13/230 (5%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAWYHVSENKLDSRAXXXXXXXXXXXXXXXXXWNPVE 180
            KTP+E W G PA DY  + +FGC A+ HV   KL+ RA                 WNP  
Sbjct: 636  KTPIEIWSGMPA-DYSQLRVFGCTAYAHVDNEKLEPRAIKCLFLGYGLGVKGYKLWNPET 694

Query: 181  KKIVMSRDVTFDEMSMVKSWGYRQVEDRSTNTSEPLQ*VEIDATPLIPAKS------VSV 342
             K  MSR V F+E  M              N S P        T +IP  S      VSV
Sbjct: 695  NKTFMSRSVVFNESVMF-------------NDSLP--------TDVIPGGSDEEQQYVSV 733

Query: 343  KNTSEDIESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKPGWMN- 519
            +    D + T  V  +V ND                    E IA  + +RS   P  +  
Sbjct: 734  QVEHVDDQETEIVGNDV-NDTVQHSPPVLQPQD-------EPIAHRRTKRSCGAPVRLIE 785

Query: 520  --DYIAYALPVIEDGT----PTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
              D + YA    E       P +Y E V S + ++W  AMQ+EM+SL KN
Sbjct: 786  ECDMVYYAFSCAEQVENTLEPATYTEAVVSGDREKWISAMQEEMQSLEKN 835


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53370655|gb|AAU89150.1| integrase core domain
            containing protein [Oryza sativa Japonica Group]
            gi|108710286|gb|ABF98081.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1322

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 67/223 (30%), Positives = 89/223 (39%), Gaps = 6/223 (2%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAWYHVSENKLDSRAXXXXXXXXXXXXXXXXXWNPVE 180
            KTP+E W G PA DY  + +FGC A+ HV   KL+ RA                 WNP  
Sbjct: 636  KTPIEIWSGMPA-DYSQLRVFGCTAYAHVDNGKLEPRAIKCLFLGYGSGVKGYKLWNPET 694

Query: 181  KKIVMSRDVTFDEMSMVKSWGYRQVEDRSTNTSEPLQ*VEIDATPLIPAKS------VSV 342
             K  MSR+V F+E  M              N S P        T +IP  S      VSV
Sbjct: 695  NKTFMSRNVIFNEFVMF-------------NDSLP--------TDVIPGGSDEEQQYVSV 733

Query: 343  KNTSEDIESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKPGWMND 522
            +    D + T  V  +V ND                A      +   P R   +   +  
Sbjct: 734  QVEHVDDQETEIVGNDV-NDTVQHSPSVLQPQDEPIAHRRTKRSCGAPVRLIEECDMVYY 792

Query: 523  YIAYALPVIEDGTPTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
              +YA  V     P +Y E V S + ++W  A+Q+EM+SL KN
Sbjct: 793  AFSYAEQVENTLEPATYTEAVVSGDREKWISAIQEEMQSLEKN 835


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 58/219 (26%), Positives = 88/219 (40%), Gaps = 2/219 (0%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAWYHVSENKLDSRAXXXXXXXXXXXXXXXXXWNPVE 180
            KTP+E W G PA DY  + +FGC A+ HV   KL+ RA                 WNP  
Sbjct: 637  KTPIEVWSGTPA-DYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPET 695

Query: 181  KKIVMSRDVTFDEMSM-VKSWGYRQVEDRSTNTSEPLQ*VEIDATPLIPAKSVSVKNTSE 357
             K  MSR V F+E  M   S     V ++       LQ + +    +     V V+   E
Sbjct: 696  GKTFMSRSVVFNESVMFTNSLPSEHVPEKE------LQRMHMQVEHVDDDTGVQVEPVDE 749

Query: 358  DIESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKPGWMNDYIAYA 537
              +   +V  +  +D                    ++  T+KP +   +   ++ Y    
Sbjct: 750  QDDHNNDVADDDAHDDVQQTPPILQLEEDLSIAQRKSKRTTKPPKRLIEECNLSYYALSC 809

Query: 538  LPVIED-GTPTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
               +E+   P +Y E V   + + W  AM +EM+SL KN
Sbjct: 810  AEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKN 848


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 58/219 (26%), Positives = 88/219 (40%), Gaps = 2/219 (0%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAWYHVSENKLDSRAXXXXXXXXXXXXXXXXXWNPVE 180
            KTP+E W G PA DY  + +FGC A+ HV   KL+ RA                 WNP  
Sbjct: 635  KTPIEVWSGTPA-DYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPET 693

Query: 181  KKIVMSRDVTFDEMSM-VKSWGYRQVEDRSTNTSEPLQ*VEIDATPLIPAKSVSVKNTSE 357
             K  MSR V F+E  M   S     V ++       LQ + +    +     V V+   E
Sbjct: 694  GKTFMSRSVVFNESVMFTNSLPSEHVPEKE------LQRMHMQVEHVDDYTGVQVEPVHE 747

Query: 358  DIESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKPGWMNDYIAYA 537
              +   +V  +  +D                    ++  T+KP +   +   ++ Y    
Sbjct: 748  QDDHNNDVADDDAHDDVQQTPPILQLEEELPIAQRKSKRTTKPPKRLIEECNLSYYALSC 807

Query: 538  LPVIED-GTPTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
               +E+   P +Y E V   + + W  AM +EM+SL KN
Sbjct: 808  AEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKN 846


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 58/219 (26%), Positives = 88/219 (40%), Gaps = 2/219 (0%)
 Frame = +1

Query: 1    KTPMEKWYGKPAYDYDSIHIFGCPAWYHVSENKLDSRAXXXXXXXXXXXXXXXXXWNPVE 180
            KTP+E W G PA DY  + +FGC A+ HV   KL+ RA                 WNP  
Sbjct: 635  KTPIEVWSGMPA-DYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPET 693

Query: 181  KKIVMSRDVTFDEMSM-VKSWGYRQVEDRSTNTSEPLQ*VEIDATPLIPAKSVSVKNTSE 357
             K  MSR V F+E  M   S     V ++       LQ + +    +     V V+   E
Sbjct: 694  GKTFMSRSVVFNESVMFTNSLPSEHVPEKE------LQRMHMQVEHVDDDTGVQVEPVHE 747

Query: 358  DIESTREVTTEVPNDXXXXXXXXXXXXXXXXATVTETIATSKPRRSTRKPGWMNDYIAYA 537
              +   +V  +  +D                    ++  T+KP +   +   ++ Y    
Sbjct: 748  QDDHNNDVADDDAHDDVQQTPPILQLEEELPIAQRKSKRTTKPPKRLIEECNLSYYALSC 807

Query: 538  LPVIED-GTPTSYLEVVHSAEWKEWEGAMQDEMESLYKN 651
               +E+   P +Y E V   + + W  AM +EM+SL KN
Sbjct: 808  AEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKN 846