BLASTX nr result
ID: Papaver25_contig00024041
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00024041
(599 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 285 5e-75
ref|XP_004298501.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 284 1e-74
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 283 2e-74
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall... 283 3e-74
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida] 281 7e-74
ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ... 281 1e-73
ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ... 281 1e-73
gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza] 280 2e-73
gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali... 280 2e-73
ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis tha... 280 2e-73
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 280 2e-73
ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutr... 280 2e-73
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis... 280 2e-73
gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tu... 280 2e-73
gb|EXB53890.1| RNA-dependent RNA polymerase 1 [Morus notabilis] 280 3e-73
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus... 279 4e-73
ref|XP_004297427.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 279 4e-73
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 279 4e-73
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 279 5e-73
ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Caps... 279 5e-73
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 285 bits (730), Expect = 5e-75
Identities = 147/200 (73%), Positives = 171/200 (85%), Gaps = 1/200 (0%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLR++SAWMFAS+ LTAA IR+WMG+FREIRNVAKYAARLGQSF SS ETLSV+ +EIE
Sbjct: 466 QLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEIE 525
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGLKCTP-SAFQIRYGGYKGVVAVDP 359
I DV+IE T Y FSDGIGK+S+EFA KVA+KCGLK P SAFQIRYGGYKGVVA DP
Sbjct: 526 IIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADP 585
Query: 360 RAVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEA 539
+ KKL LR SM K+ S+ TKLDVL+WSK+QPCFLNRQ+ISLLSTLG+ D +F+KKQ+EA
Sbjct: 586 TSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREA 645
Query: 540 VNQLDSILTDPLKAYKALEI 599
V QLD+ILTDPLKA +ALE+
Sbjct: 646 VRQLDAILTDPLKAQEALEL 665
>ref|XP_004298501.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca subsp.
vesca]
Length = 1107
Score = 284 bits (727), Expect = 1e-74
Identities = 143/197 (72%), Positives = 162/197 (82%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLR NSAWMFAS+ LTA IRDWMGDF I NV+KY ARLGQSF SS ET SV S+EIE
Sbjct: 438 QLRQNSAWMFASRKGLTAQGIRDWMGDFSHITNVSKYGARLGQSFSSSWETFSVGSDEIE 497
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGLKCTPSAFQIRYGGYKGVVAVDPR 362
I DVEI+ NGT Y FSDGIGKIS++FA +VA KCG TPSAFQIRYGGYKGVVAVDP
Sbjct: 498 AIPDVEIKRNGTNYCFSDGIGKISADFAERVARKCGKSSTPSAFQIRYGGYKGVVAVDPT 557
Query: 363 AVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEAV 542
KKL LRKSMCKF S NTKLDV++W+K+QPCFLNRQ+I+LLSTLGV D VF+KKQ +A+
Sbjct: 558 LSKKLALRKSMCKFKSLNTKLDVITWTKYQPCFLNRQLITLLSTLGVRDRVFEKKQNQAM 617
Query: 543 NQLDSILTDPLKAYKAL 593
+QL+ IL DPLKA +AL
Sbjct: 618 DQLEGILNDPLKAQEAL 634
>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
Length = 1109
Score = 283 bits (725), Expect = 2e-74
Identities = 145/200 (72%), Positives = 168/200 (84%), Gaps = 1/200 (0%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLRDNSAWMFAS+ LTAA IR MGDF +IRNVAKYAARLGQSF SS ETL V +EIE
Sbjct: 449 QLRDNSAWMFASRPGLTAADIRSRMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKHEIE 508
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGLK-CTPSAFQIRYGGYKGVVAVDP 359
I D+E +GT Y FSDGIGKIS+E AH+VA KCG K TPSAFQIRYGGYKGVVAVDP
Sbjct: 509 IIPDIETHRDGTTYVFSDGIGKISAELAHRVAIKCGCKNSTPSAFQIRYGGYKGVVAVDP 568
Query: 360 RAVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEA 539
+ +KL LRKSM K+ S+NT LDVLSWSK++PCFLNRQ+I+LLSTLGV D+VF+KKQ+EA
Sbjct: 569 TSSRKLSLRKSMFKYESENTNLDVLSWSKYRPCFLNRQLITLLSTLGVKDHVFEKKQREA 628
Query: 540 VNQLDSILTDPLKAYKALEI 599
V+QLD+IL DPL+A +ALE+
Sbjct: 629 VDQLDTILKDPLRAQEALEL 648
>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
Length = 1107
Score = 283 bits (723), Expect = 3e-74
Identities = 146/198 (73%), Positives = 169/198 (85%), Gaps = 1/198 (0%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLR+NSAWMFA LT+A IR WMGDF IRNVAKYAARLGQSF SS ETL+V S+EIE
Sbjct: 460 QLRENSAWMFAPIDGLTSAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIE 519
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGL-KCTPSAFQIRYGGYKGVVAVDP 359
I DVEI S GT Y FSDGIGKIS+EFA +VA KCGL + +PSAFQIRYGGYKGVVAVDP
Sbjct: 520 VIPDVEIISLGTRYVFSDGIGKISAEFARRVAKKCGLTEFSPSAFQIRYGGYKGVVAVDP 579
Query: 360 RAVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEA 539
+ KKL LRKSM KF S+NTKLDVL+WSK+QPC++NRQ+I+LLSTLGV D VFKKKQ+E
Sbjct: 580 NSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVKDSVFKKKQREV 639
Query: 540 VNQLDSILTDPLKAYKAL 593
V++LD+ILTDPL+A++AL
Sbjct: 640 VDRLDAILTDPLEAHEAL 657
>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
Length = 775
Score = 281 bits (720), Expect = 7e-74
Identities = 143/199 (71%), Positives = 167/199 (83%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLRDNS WMFAS+ LTA IR WMGDF++IRNVAKYAARLGQSFGSS ETLSV +EI+
Sbjct: 144 QLRDNSVWMFASRPGLTAYDIRTWMGDFQQIRNVAKYAARLGQSFGSSRETLSVGRHEIK 203
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGLKCTPSAFQIRYGGYKGVVAVDPR 362
I DVE+ +GT Y FSDGIGKIS++FAH+VA KCGL+ TPSAFQIRYGGYKGVVAVDP
Sbjct: 204 YIPDVEV--HGTNYVFSDGIGKISADFAHRVAKKCGLQHTPSAFQIRYGGYKGVVAVDPY 261
Query: 363 AVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEAV 542
+ KL LRKSM K+ S NTKLDVL WSK+QPC+LNRQ+++L+STLGV D VFK+KQ EAV
Sbjct: 262 SPMKLSLRKSMLKYESNNTKLDVLGWSKYQPCYLNRQLVTLMSTLGVKDEVFKRKQNEAV 321
Query: 543 NQLDSILTDPLKAYKALEI 599
QLD+IL D LKA +AL++
Sbjct: 322 AQLDAILHDSLKAQEALDL 340
>ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase
1 [Arabidopsis lyrata subsp. lyrata]
Length = 1107
Score = 281 bits (718), Expect = 1e-73
Identities = 145/198 (73%), Positives = 169/198 (85%), Gaps = 1/198 (0%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLR+NSAWMFA LT+A IR WMGDF IRNVAKYAARLGQSF SS ETL+V S+EIE
Sbjct: 460 QLRENSAWMFAPIEGLTSAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIE 519
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGL-KCTPSAFQIRYGGYKGVVAVDP 359
I DVEI S GT Y FSDGIGKIS+EFA +VA KCGL + +PSAFQIRYGGYKGVVAVDP
Sbjct: 520 VIPDVEIISLGTRYVFSDGIGKISAEFARRVAKKCGLTEFSPSAFQIRYGGYKGVVAVDP 579
Query: 360 RAVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEA 539
+ KKL LRKSM KF S+NTKLDVL+WSK+QPC++NRQ+I+LLSTLGV D VF+KKQ+E
Sbjct: 580 NSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVEDSVFEKKQREV 639
Query: 540 VNQLDSILTDPLKAYKAL 593
V++LD+ILTDPL+A++AL
Sbjct: 640 VDRLDAILTDPLEAHEAL 657
>ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase
1 [Arabidopsis lyrata subsp. lyrata]
Length = 1097
Score = 281 bits (718), Expect = 1e-73
Identities = 144/198 (72%), Positives = 169/198 (85%), Gaps = 1/198 (0%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLR+NSAWMFA LT+A IR WMGDF IRNVAKYAARLGQSF SS ETL+V S+EIE
Sbjct: 450 QLRENSAWMFAPIDGLTSAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIE 509
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGL-KCTPSAFQIRYGGYKGVVAVDP 359
I DVEI S GT Y FSDGIGKIS+EFA +VA KCGL + +PSAFQIRYGGYKGVVAVDP
Sbjct: 510 VIPDVEIISLGTRYVFSDGIGKISAEFARRVAKKCGLTEFSPSAFQIRYGGYKGVVAVDP 569
Query: 360 RAVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEA 539
+ KKL LRKSM KF S+NTKLDVL+WSK+QPC++NRQ+I+LLSTLG+ D VF+KKQ+E
Sbjct: 570 NSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGIKDSVFEKKQREV 629
Query: 540 VNQLDSILTDPLKAYKAL 593
V++LD+ILTDPL+A++AL
Sbjct: 630 VDRLDAILTDPLEAHEAL 647
>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
Length = 1101
Score = 280 bits (717), Expect = 2e-73
Identities = 144/200 (72%), Positives = 162/200 (81%), Gaps = 1/200 (0%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLR+NS WMFA LTA IR WMGDF IRNVAKYAARLGQSF SSTETL V E+E
Sbjct: 455 QLRENSLWMFAPVDGLTADDIRRWMGDFSSIRNVAKYAARLGQSFSSSTETLKVAQYEVE 514
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGLKC-TPSAFQIRYGGYKGVVAVDP 359
RI DVE+ +GT Y FSDGIGKISS+FA +VA KCG++ PSAFQIRYGGYKGVVAVDP
Sbjct: 515 RIPDVEVVRDGTTYIFSDGIGKISSDFARRVATKCGIRDGVPSAFQIRYGGYKGVVAVDP 574
Query: 360 RAVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEA 539
+ KL LRKSM K+ S NTKLDVLSWSK+QPCF+NRQII+LLSTLGV D+VF+KKQ+EA
Sbjct: 575 TSSMKLSLRKSMLKYQSDNTKLDVLSWSKYQPCFMNRQIITLLSTLGVRDHVFEKKQREA 634
Query: 540 VNQLDSILTDPLKAYKALEI 599
V QLD IL DPLKA AL++
Sbjct: 635 VAQLDDILVDPLKAQDALDL 654
>gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
Length = 1107
Score = 280 bits (717), Expect = 2e-73
Identities = 145/198 (73%), Positives = 169/198 (85%), Gaps = 1/198 (0%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLR+NSAWMFA +TAA IR WMGDF IRNVAKYAARLGQSF SS ETL+V S+EIE
Sbjct: 459 QLRENSAWMFAPIDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIE 518
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGL-KCTPSAFQIRYGGYKGVVAVDP 359
I DVEI S GT Y FSDGIGKIS+EFA KVA KCGL + +PSAFQIRYGGYKGVVAVDP
Sbjct: 519 VIPDVEIISLGTRYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDP 578
Query: 360 RAVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEA 539
+ KKL LRKSM KF S+NTKLDVL+WSK+QPC++NRQ+I+LLSTLGV+D VF+KKQ+E
Sbjct: 579 NSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREV 638
Query: 540 VNQLDSILTDPLKAYKAL 593
V++LD+ILT PL+A++AL
Sbjct: 639 VDRLDAILTHPLEAHEAL 656
>ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
gi|75335341|sp|Q9LQV2.1|RDR1_ARATH RecName:
Full=RNA-dependent RNA polymerase 1; Short=AtRDRP1;
AltName: Full=RNA-directed RNA polymerase 1
gi|8778232|gb|AAF79241.1|AC006917_26 F10B6.19
[Arabidopsis thaliana] gi|110737376|dbj|BAF00633.1|
putative RNA-directed RNA polymerase [Arabidopsis
thaliana] gi|332191105|gb|AEE29226.1| RNA-dependent RNA
polymerase 1 [Arabidopsis thaliana]
Length = 1107
Score = 280 bits (717), Expect = 2e-73
Identities = 145/198 (73%), Positives = 169/198 (85%), Gaps = 1/198 (0%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLR+NSAWMFA +TAA IR WMGDF IRNVAKYAARLGQSF SS ETL+V S+EIE
Sbjct: 459 QLRENSAWMFAPIDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIE 518
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGL-KCTPSAFQIRYGGYKGVVAVDP 359
I DVEI S GT Y FSDGIGKIS+EFA KVA KCGL + +PSAFQIRYGGYKGVVAVDP
Sbjct: 519 VIPDVEIISLGTRYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDP 578
Query: 360 RAVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEA 539
+ KKL LRKSM KF S+NTKLDVL+WSK+QPC++NRQ+I+LLSTLGV+D VF+KKQ+E
Sbjct: 579 NSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREV 638
Query: 540 VNQLDSILTDPLKAYKAL 593
V++LD+ILT PL+A++AL
Sbjct: 639 VDRLDAILTHPLEAHEAL 656
>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
family protein [Populus trichocarpa]
Length = 1133
Score = 280 bits (717), Expect = 2e-73
Identities = 144/200 (72%), Positives = 170/200 (85%), Gaps = 1/200 (0%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLR+NS WMFAS+ LTAA IR WMG F +IRNVA+YAARLGQSFGSSTETLSV S+EIE
Sbjct: 462 QLRENSCWMFASRLGLTAADIRAWMGSFHKIRNVARYAARLGQSFGSSTETLSVSSHEIE 521
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGLK-CTPSAFQIRYGGYKGVVAVDP 359
I D+E+ GT Y FSDGIGKIS+EFA KVA KCG K TPSAFQIRY GYKGVVAVDP
Sbjct: 522 IIPDIEVSRGGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDP 581
Query: 360 RAVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEA 539
+ KKL LR+SM K+ S+NTKLDVL+ SK+QPCFLNRQ+I+LLSTLGV D+ F++KQ+EA
Sbjct: 582 TSSKKLSLRRSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREA 641
Query: 540 VNQLDSILTDPLKAYKALEI 599
V+QLD++LTDPL+A +ALE+
Sbjct: 642 VDQLDAMLTDPLRAQEALEL 661
>ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum]
gi|557094740|gb|ESQ35322.1| hypothetical protein
EUTSA_v10006629mg [Eutrema salsugineum]
Length = 1108
Score = 280 bits (716), Expect = 2e-73
Identities = 145/198 (73%), Positives = 167/198 (84%), Gaps = 1/198 (0%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLR+NSAWMFA L+A IR WMGDF IRNVAKYAARLGQSF SS ETL+V ++EIE
Sbjct: 459 QLRENSAWMFAPIDGLSAEIIRAWMGDFEHIRNVAKYAARLGQSFSSSRETLNVRTDEIE 518
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGL-KCTPSAFQIRYGGYKGVVAVDP 359
I DVEI GT Y FSDGIGKISSEFA +VA KCGL + TPSAFQIRYGGYKGVVAVD
Sbjct: 519 VIPDVEITYLGTRYVFSDGIGKISSEFARRVAKKCGLTEFTPSAFQIRYGGYKGVVAVDR 578
Query: 360 RAVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEA 539
+ KKL LRKSM KF S+NTKLDVL+WSK+QPC+LNRQ+I+LLSTLGV DYVF+KKQ+E
Sbjct: 579 NSYKKLSLRKSMSKFESKNTKLDVLAWSKYQPCYLNRQLITLLSTLGVKDYVFEKKQREV 638
Query: 540 VNQLDSILTDPLKAYKAL 593
V++LD+ILTDPL+A++AL
Sbjct: 639 VDKLDAILTDPLEAHEAL 656
>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
1a [Cucumis sativus]
Length = 1130
Score = 280 bits (716), Expect = 2e-73
Identities = 143/199 (71%), Positives = 161/199 (80%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLRDNS WMFAS + AA IR WMGDFR I+N AKYAARLGQSFGSSTE LSV SNE E
Sbjct: 461 QLRDNSLWMFASGPDIDAAYIRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNERE 520
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGLKCTPSAFQIRYGGYKGVVAVDPR 362
I D+E++ Y FSDGIGKISS+FA +VA KCG + PSAFQIRYGGYKGVVAVDP
Sbjct: 521 IIPDIEVQQGEIKYVFSDGIGKISSKFAKEVAAKCGFQAVPSAFQIRYGGYKGVVAVDPY 580
Query: 363 AVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEAV 542
+ KL LRKSMCKF S NTKLDVL SK+QPCFLNRQ+I+L+STLGV D +F+KKQ EAV
Sbjct: 581 STIKLSLRKSMCKFESDNTKLDVLGHSKYQPCFLNRQLITLMSTLGVRDEIFEKKQSEAV 640
Query: 543 NQLDSILTDPLKAYKALEI 599
QLD+ILTDPLKA +ALE+
Sbjct: 641 EQLDAILTDPLKAQEALEL 659
>gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tuberosum]
Length = 1050
Score = 280 bits (716), Expect = 2e-73
Identities = 143/199 (71%), Positives = 167/199 (83%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLRDNS WMFAS+ LTA IR WMGDF +I+NVAKYAARLGQSFGSSTETLSV +EIE
Sbjct: 299 QLRDNSVWMFASRPGLTANDIRTWMGDFSQIKNVAKYAARLGQSFGSSTETLSVLRHEIE 358
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGLKCTPSAFQIRYGGYKGVVAVDPR 362
I DV++ +GT Y FSDGIGKIS++FA +VA+KCGL+ TPSAFQIRYGGYKGVVAVDP
Sbjct: 359 VIPDVKV--HGTSYVFSDGIGKISADFARRVASKCGLQYTPSAFQIRYGGYKGVVAVDPY 416
Query: 363 AVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEAV 542
+ KL LRKSM K+ S N KLDVL WSK+QPCFLNRQ+I+LLSTLGV D + ++KQKEAV
Sbjct: 417 SSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCFLNRQLITLLSTLGVKDDILEQKQKEAV 476
Query: 543 NQLDSILTDPLKAYKALEI 599
+QLD+IL D LKA +ALE+
Sbjct: 477 DQLDAILHDSLKAQEALEL 495
>gb|EXB53890.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
Length = 885
Score = 280 bits (715), Expect = 3e-73
Identities = 141/200 (70%), Positives = 167/200 (83%), Gaps = 1/200 (0%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLR+ SAWMFAS+ LTAA IR WMGDFR I+NVAKYAARLGQSFGSS ET V +E+E
Sbjct: 267 QLREGSAWMFASRDGLTAADIRKWMGDFRCIKNVAKYAARLGQSFGSSHETFRVGRHEVE 326
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGL-KCTPSAFQIRYGGYKGVVAVDP 359
I D+++E +G Y FSDGIGKIS +FA +VA KCGL + TPSAFQIRYGGYKGVVAVDP
Sbjct: 327 LIPDIQVERDGKNYCFSDGIGKISEDFAREVAKKCGLNRFTPSAFQIRYGGYKGVVAVDP 386
Query: 360 RAVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEA 539
+ KL LRKSMCK+ S+N KLDVL+WSK+QPCFLNRQ+I+LLSTLGVSD+VF+KKQKE
Sbjct: 387 TSSMKLSLRKSMCKYESKNNKLDVLAWSKYQPCFLNRQLITLLSTLGVSDHVFEKKQKET 446
Query: 540 VNQLDSILTDPLKAYKALEI 599
VN+L+SILTD L+A L++
Sbjct: 447 VNRLESILTDSLRAQDELKM 466
>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
Length = 1110
Score = 279 bits (714), Expect = 4e-73
Identities = 143/200 (71%), Positives = 165/200 (82%), Gaps = 1/200 (0%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLRDNS WMFA L A IR+WMGDF IRNVAKYAARLGQSFGSSTETLSV EIE
Sbjct: 452 QLRDNSLWMFAPTDGLNADGIREWMGDFSSIRNVAKYAARLGQSFGSSTETLSVSKREIE 511
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGLKC-TPSAFQIRYGGYKGVVAVDP 359
I+DV+ NGT YTFSDGIGKIS +FA +VA KCG++ TPSAFQIRYGGYKGVVAVDP
Sbjct: 512 EIQDVK---NGTEYTFSDGIGKISEDFARQVAAKCGVRSSTPSAFQIRYGGYKGVVAVDP 568
Query: 360 RAVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEA 539
+ KKL LR SM K+ S NTKLDVL+WSK+QPCFLNRQII+LLSTLGV D+VF+K+Q+EA
Sbjct: 569 SSKKKLSLRPSMLKYQSDNTKLDVLAWSKYQPCFLNRQIITLLSTLGVKDHVFEKRQREA 628
Query: 540 VNQLDSILTDPLKAYKALEI 599
V QLD +L DP++A +AL++
Sbjct: 629 VAQLDDVLIDPMRAQEALDL 648
>ref|XP_004297427.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca subsp.
vesca]
Length = 1090
Score = 279 bits (714), Expect = 4e-73
Identities = 140/197 (71%), Positives = 161/197 (81%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLR+NSAWMFAS+ LTA IRDWMG+F I+NV+KY ARLGQSF SS ET SV S+EIE
Sbjct: 444 QLRENSAWMFASRRGLTAQGIRDWMGEFSHIKNVSKYGARLGQSFSSSRETFSVGSDEIE 503
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGLKCTPSAFQIRYGGYKGVVAVDPR 362
I DVEIE GT Y FSDGIGK+S++FA +VA KCG TPSAFQIRYGGYKGVVAVDP
Sbjct: 504 VIPDVEIERGGTKYCFSDGIGKMSADFAERVARKCGKSSTPSAFQIRYGGYKGVVAVDPT 563
Query: 363 AVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEAV 542
KKL LR SMCKF S NT LDV+SW+K+QPCFLNRQ+I+LLSTLGV D VF+KKQ +A+
Sbjct: 564 LSKKLALRNSMCKFKSLNTMLDVISWTKYQPCFLNRQLITLLSTLGVRDRVFEKKQNQAM 623
Query: 543 NQLDSILTDPLKAYKAL 593
+QL+ IL DPLKA +AL
Sbjct: 624 DQLEGILNDPLKAQEAL 640
>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 279 bits (714), Expect = 4e-73
Identities = 142/200 (71%), Positives = 168/200 (84%), Gaps = 1/200 (0%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLR+NSAWMFAS+ LTAA IR WMG+F +IRNVAKYAARLGQSF SSTETLSV +EI
Sbjct: 455 QLRENSAWMFASRKGLTAADIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSVSKDEIN 514
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGLK-CTPSAFQIRYGGYKGVVAVDP 359
I D+EI +G Y F DGIGKIS+EFA KVA KC LK CTPSAFQIR GG+KGVVA+DP
Sbjct: 515 LIPDIEIMKDGIKYVFPDGIGKISAEFAKKVAAKCRLKGCTPSAFQIRIGGFKGVVAIDP 574
Query: 360 RAVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEA 539
+ KL LRKSM K+ S+NTKLDVL+WSK+QPCFLNRQ+I+LLSTLGV DY F+KKQ+E
Sbjct: 575 TSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDYAFEKKQREV 634
Query: 540 VNQLDSILTDPLKAYKALEI 599
V+QL+++LTDPL+A +ALE+
Sbjct: 635 VDQLNALLTDPLEAQEALEL 654
>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
tuberosum]
Length = 1115
Score = 279 bits (713), Expect = 5e-73
Identities = 142/199 (71%), Positives = 167/199 (83%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLRDNS WMFAS+ LTA IR WMGDF +I+NVAKYAARLGQSFGSSTETLSV +EIE
Sbjct: 451 QLRDNSVWMFASRPGLTAIDIRTWMGDFSQIKNVAKYAARLGQSFGSSTETLSVLRHEIE 510
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGLKCTPSAFQIRYGGYKGVVAVDPR 362
I DV++ +GT Y FSDGIGKIS++FA +VA+KCGL+ TPSAFQIRYGGYKGVVAVDP
Sbjct: 511 VIPDVKV--HGTSYVFSDGIGKISADFARRVASKCGLQHTPSAFQIRYGGYKGVVAVDPY 568
Query: 363 AVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEAV 542
+ KL LRKSM K+ S N KLDVL WSK+QPC+LNRQ+++LLSTLGV D V ++KQKEAV
Sbjct: 569 SSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLVTLLSTLGVKDDVLEQKQKEAV 628
Query: 543 NQLDSILTDPLKAYKALEI 599
+QLD+IL D LKA +ALE+
Sbjct: 629 DQLDAILHDSLKAQEALEL 647
>ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Capsella rubella]
gi|482575337|gb|EOA39524.1| hypothetical protein
CARUB_v10008144mg [Capsella rubella]
Length = 1107
Score = 279 bits (713), Expect = 5e-73
Identities = 146/198 (73%), Positives = 166/198 (83%), Gaps = 1/198 (0%)
Frame = +3
Query: 3 QLRDNSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIE 182
QLR+NSAWMFA + LTAA IR WMGDF IRNVAKYAARLGQSF SS ETL+V S+EIE
Sbjct: 459 QLRENSAWMFAPRDRLTAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIE 518
Query: 183 RIRDVEIESNGTIYTFSDGIGKISSEFAHKVANKCGL-KCTPSAFQIRYGGYKGVVAVDP 359
I DVE T Y FSDGIGKIS+EFA KVA KCGL + +PSAFQIRYGGYKGVVAVDP
Sbjct: 519 VIPDVEAMYLDTRYVFSDGIGKISAEFARKVAKKCGLTEFSPSAFQIRYGGYKGVVAVDP 578
Query: 360 RAVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEA 539
+ KKL LRKSM KF S NTKLDVL+WSK+QPC+LNRQII+LLSTLGV D VF+KKQ+E
Sbjct: 579 NSSKKLSLRKSMSKFESGNTKLDVLAWSKYQPCYLNRQIITLLSTLGVKDNVFEKKQREV 638
Query: 540 VNQLDSILTDPLKAYKAL 593
V++LD+ILTDPL+A++AL
Sbjct: 639 VDRLDAILTDPLEAHEAL 656