BLASTX nr result

ID: Papaver25_contig00023436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00023436
         (1835 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like ...    66   6e-08
gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]               61   1e-06

>dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1197

 Score = 65.9 bits (159), Expect = 6e-08
 Identities = 33/88 (37%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
 Frame = -1

Query: 305 LTWNCQGLGKKDTQH*LLEILNKENPDILCLIKTKQQNKNMHKILKYVNIHHYWLVPPRG 126
           ++WNCQG+G   T   + EIL K +PD++ L++T  Q++ + K L ++  ++++LV P G
Sbjct: 1   MSWNCQGIGNPKTVRRVREILKKLSPDVIFLMETMNQDEVVLKKLDFLKRYNHFLVSPSG 60

Query: 125 QA-GGMAMI*KHNLSINIKSFTHNLINA 45
           Q  GG+A+  KH++ + I S   N I+A
Sbjct: 61  QGKGGLALFWKHDVEMAIVSSCDNFIDA 88


>gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]
          Length = 238

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 34/105 (32%), Positives = 57/105 (54%)
 Frame = -1

Query: 362 ETKGKEYPIISYFWEFIVVLTWNCQGLGKKDTQH*LLEILNKENPDILCLIKTKQQNKNM 183
           + KGKE       +   + L WNCQGLG   T   L EI  K  PD++CL +TKQ+N  +
Sbjct: 38  DLKGKETQHNQEHFIHGIALCWNCQGLGIDLTVRRLKEINRKYLPDVICLSETKQRNDYV 97

Query: 182 HKILKYVNIHHYWLVPPRGQAGGMAMI*KHNLSINIKSFTHNLIN 48
                 +   ++ +VP  G +GG+ ++ K ++ I++   + NL++
Sbjct: 98  RDTCCELGFSNFVMVPSMGLSGGLVVLWKPSVHISVSFNSPNLVD 142


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