BLASTX nr result

ID: Papaver25_contig00022903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00022903
         (583 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004300785.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    62   9e-08
ref|XP_004298549.1| PREDICTED: FBD-associated F-box protein At5g...    60   3e-07
ref|XP_006366040.1| PREDICTED: putative F-box protein At3g58860-...    42   4e-06
ref|XP_003636673.1| F-box family protein [Medicago truncatula] g...    57   5e-06

>ref|XP_004300785.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g16930-like [Fragaria
           vesca subsp. vesca]
          Length = 487

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 37/109 (33%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
 Frame = +1

Query: 256 NLQRLELRTHLSRDCLRPIFYVLKISPNLESVSMQISKQYNYDPEVYPYFDEVKFNPENI 435
           NL  LEL+ H  R CL+ +  VLKISP+LE + + + +++ Y  E   Y D+V  + + +
Sbjct: 341 NLNYLELQLHTCR-CLQSLATVLKISPHLEQLKILLKRKHMYANE-NNYSDDV--DEDEV 396

Query: 436 GDYWDAGLSLP-CMICHLKFVEINGLRGCVNELKFLEILLKHATVLEKV 579
              WDA  ++P C+I HLK + +   +GC ++++  + L++H   L +V
Sbjct: 397 EPEWDAPETVPVCLISHLKTICLWDFKGCPDDMEVAKYLVQHGKALNRV 445


>ref|XP_004298549.1| PREDICTED: FBD-associated F-box protein At5g22730-like [Fragaria
           vesca subsp. vesca]
          Length = 253

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
 Frame = +1

Query: 256 NLQRLELRTHLSRDCLRPIFYVLKISPNLESVSMQISKQYNYDPEVYPYFDEVKFNPENI 435
           NL  LEL+    R CL+ +  VLKISP+LE + +  +K+  Y  E   Y D+V  +    
Sbjct: 107 NLNYLELQLRTCR-CLQSLATVLKISPHLEHLKILPNKEQMYANE-NNYLDDVDVDELEH 164

Query: 436 GDYWDAGLSLP-CMICHLKFVEINGLRGCVNELKFLEILLKHATVLEKV 579
           G   DA  S+P C+I HLK + +  L+GC N+++  + L+KH   L +V
Sbjct: 165 G--LDAPESVPVCLISHLKTICLGDLKGCPNDMEVAKYLVKHGQALNRV 211


>ref|XP_006366040.1| PREDICTED: putative F-box protein At3g58860-like [Solanum
           tuberosum]
          Length = 474

 Score = 42.0 bits (97), Expect(2) = 4e-06
 Identities = 32/109 (29%), Positives = 48/109 (44%)
 Frame = +1

Query: 253 YNLQRLELRTHLSRDCLRPIFYVLKISPNLESVSMQISKQYNYDPEVYPYFDEVKFNPEN 432
           YNL  LEL   L    + P+  +L+  P L+S+          DP ++   D+       
Sbjct: 344 YNLTHLELSMELENHSIGPLKELLQCLPKLQSLHFS----EGLDPCMHLCEDD------- 392

Query: 433 IGDYWDAGLSLPCMICHLKFVEINGLRGCVNELKFLEILLKHATVLEKV 579
               W+     PC +  LK V+ +   G   E+ FL  LL+ A VLEK+
Sbjct: 393 ----WNLRSVPPCFLSSLKTVKYSNFHGNDTEISFLRNLLEIAIVLEKL 437



 Score = 34.7 bits (78), Expect(2) = 4e-06
 Identities = 19/71 (26%), Positives = 36/71 (50%)
 Frame = +3

Query: 3   APSLSSFIFNSHFSTTFTLENVSSLVTADVEIKVNEEYQLLSSYGQRFMRFFRGFHKVKV 182
           A SL+   ++ + S    L N+SS V A + I +   Y+  +    R ++ FRG HK+  
Sbjct: 262 AASLTFLKYSGYLSNEICLYNLSSSVNASIHIPIL--YEKRNQIAFRAVKLFRGLHKISA 319

Query: 183 LTLKHSFLKAL 215
             + +  +++L
Sbjct: 320 ARISNRAIESL 330


>ref|XP_003636673.1| F-box family protein [Medicago truncatula]
           gi|355502608|gb|AES83811.1| F-box family protein
           [Medicago truncatula]
          Length = 515

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
 Frame = +1

Query: 253 YNLQRLELRTHLSRDCLRPIFYVLKISPNLESVSMQISKQYNYDPEVY--PYFDEVKFNP 426
           YNL+ LEL T L++  ++ +  + +  P L + +++I   Y  + +++    +D      
Sbjct: 370 YNLKSLELHTSLNKSNVQALACLFRSCPTLHTFNLEIINDYKIERKLWNRDLWDMTSTEE 429

Query: 427 ENIGDYWDAGL-SLPCMICHLKFVEINGLRGCVNELKFLEILLKHATVLEKV 579
           E    YW++ + SL   + HLK V+I G   C NE+  ++ LLKH   LE++
Sbjct: 430 EQ---YWESQIPSLKSFLQHLKVVKIKGFLDCANEVTLVKFLLKHGKGLEEM 478


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