BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00022864
         (1261 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...   437   e-120
ref|XP_007041228.1| Pseudouridine synthase family protein isofor...   437   e-120
ref|XP_007041230.1| Pseudouridine synthase family protein isofor...   432   e-118
ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like ...   421   e-115
ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus ...   420   e-115
ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutr...   419   e-114
gb|EYU26478.1| hypothetical protein MIMGU_mgv1a018737mg [Mimulus...   419   e-114
ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like ...   418   e-114
ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   418   e-114
ref|NP_172451.2| pseudouridine synthase family protein [Arabidop...   416   e-113
dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana] g...   416   e-113
gb|AAT06466.1| At1g09800 [Arabidopsis thaliana]                       416   e-113
ref|XP_006305124.1| hypothetical protein CARUB_v10009493mg [Caps...   413   e-113
ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   412   e-112
ref|XP_002892526.1| hypothetical protein ARALYDRAFT_471082 [Arab...   412   e-112
gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]      410   e-112
ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Popu...   410   e-112
ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-lik...   410   e-112
ref|XP_002441964.1| hypothetical protein SORBIDRAFT_08g005650 [S...   410   e-112
ref|XP_007148561.1| hypothetical protein PHAVU_006G218900g [Phas...   408   e-111

>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
            gi|297739525|emb|CBI29707.3| unnamed protein product
            [Vitis vinifera]
          Length = 380

 Score =  437 bits (1125), Expect = e-120
 Identities = 222/329 (67%), Positives = 257/329 (78%)
 Frame = -3

Query: 1067 INNNPRMQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSSRTDAG 888
            +  NPR+QRYLVA EY G +F GSQQQ   RTV G LQEAF +FIGQPV I  SSRTDAG
Sbjct: 55   MTQNPRVQRYLVAVEYIGTRFSGSQQQLNCRTVAGALQEAFHKFIGQPVSIFCSSRTDAG 114

Query: 887  VHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCIPADFH 708
            VHALSNVCHVDVERISKR+PGEVLPP+EP VVR AVNH+L K EGDV V+DVRC+P DFH
Sbjct: 115  VHALSNVCHVDVERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDVMVIDVRCVPPDFH 174

Query: 707  ARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFSSFRGT 528
            AR++A ERTYFYR+LSGPEPLS+FE+ RAWHV E+LD++A+QKACRVLVG HDFSSFR  
Sbjct: 175  ARYKARERTYFYRLLSGPEPLSSFEKDRAWHVPEDLDLLAMQKACRVLVGCHDFSSFRAA 234

Query: 527  GCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGVDVTCKVPISI 348
            GCQAKSPI+TL EL V+EV  TPYFPS  ER Q N  E++P+  S+ +  +V      + 
Sbjct: 235  GCQAKSPIRTLDELCVSEVLPTPYFPSITERAQNNFTEENPLACSNNA--EVPDSPSTAN 292

Query: 347  KDKLXXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITTSDVER 168
             D+L            RR+ HRC+++TARARSFLYHQVRLLVGV+K  GTG++T SDVER
Sbjct: 293  HDRLDGFNGAGQGFGVRRR-HRCFLVTARARSFLYHQVRLLVGVIKCVGTGDLTVSDVER 351

Query: 167  ILNAKTVTATSAMAPAHGLYLGRVKYKLP 81
            ILNAKTVTA S MAPA GLYLG V Y LP
Sbjct: 352  ILNAKTVTAASPMAPACGLYLGNVNYDLP 380


>ref|XP_007041228.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
            gi|508705163|gb|EOX97059.1| Pseudouridine synthase family
            protein isoform 1 [Theobroma cacao]
          Length = 374

 Score =  437 bits (1124), Expect = e-120
 Identities = 221/334 (66%), Positives = 257/334 (76%)
 Frame = -3

Query: 1082 QKPQIINNNPRMQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSS 903
            Q+   ++ NPR+QRYLVA EY G +F GSQQQ   RTV+GVL+EAF +FIGQPV I  SS
Sbjct: 39   QQESSMSKNPRIQRYLVAIEYIGTRFSGSQQQPNCRTVVGVLEEAFLKFIGQPVSIFCSS 98

Query: 902  RTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCI 723
            RTDAGVHALSNVCHVDVERISKR+PGEVLPP+EP VVR AVNH+L K EGD+ V+DVRC+
Sbjct: 99   RTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKSEGDITVIDVRCV 158

Query: 722  PADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFS 543
            P DFHAR++A ERTYFYR+LSG EPLSTFE+ RAWHV E+LD+ A+Q+AC+VLVG HDFS
Sbjct: 159  PNDFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQEACKVLVGHHDFS 218

Query: 542  SFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGVDVTCK 363
            SFR  GCQAKSPI+TL EL V+E   TPYFPS  E+ Q N   +D    S    +D+   
Sbjct: 219  SFRAAGCQAKSPIRTLDELHVSEAPPTPYFPSISEKKQNNSSTEDSHACSREPEIDLPID 278

Query: 362  VPISIKDKLXXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITT 183
               +  D++            RR+ H CYV+TARARSFLYHQVRLLVGVLK  GTGE+TT
Sbjct: 279  SFSNSDDEVGSNGITDLGFGIRRR-HHCYVVTARARSFLYHQVRLLVGVLKCVGTGELTT 337

Query: 182  SDVERILNAKTVTATSAMAPAHGLYLGRVKYKLP 81
            SDVERILNAKTVTA S MAPA+GLYLG VKY LP
Sbjct: 338  SDVERILNAKTVTAASPMAPAYGLYLGCVKYDLP 371


>ref|XP_007041230.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
            gi|508705165|gb|EOX97061.1| Pseudouridine synthase family
            protein isoform 3 [Theobroma cacao]
          Length = 373

 Score =  432 bits (1110), Expect = e-118
 Identities = 220/334 (65%), Positives = 257/334 (76%)
 Frame = -3

Query: 1082 QKPQIINNNPRMQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSS 903
            Q+   ++ NPR+QRYLVA EY G +F GSQQQ   RTV+GVL+EAF +FIGQPV I  SS
Sbjct: 39   QQESSMSKNPRIQRYLVAIEYIGTRFSGSQQQPNCRTVVGVLEEAFLKFIGQPVSIFCSS 98

Query: 902  RTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCI 723
            RTDAGVHALSNVCHVDVERISKR+PGEVLPP+EP VVR AVNH+L + EGD+ V+DVRC+
Sbjct: 99   RTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFL-QSEGDITVIDVRCV 157

Query: 722  PADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFS 543
            P DFHAR++A ERTYFYR+LSG EPLSTFE+ RAWHV E+LD+ A+Q+AC+VLVG HDFS
Sbjct: 158  PNDFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQEACKVLVGHHDFS 217

Query: 542  SFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGVDVTCK 363
            SFR  GCQAKSPI+TL EL V+E   TPYFPS  E+ Q N   +D    S    +D+   
Sbjct: 218  SFRAAGCQAKSPIRTLDELHVSEAPPTPYFPSISEKKQNNSSTEDSHACSREPEIDLPID 277

Query: 362  VPISIKDKLXXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITT 183
               +  D++            RR+ H CYV+TARARSFLYHQVRLLVGVLK  GTGE+TT
Sbjct: 278  SFSNSDDEVGSNGITDLGFGIRRR-HHCYVVTARARSFLYHQVRLLVGVLKCVGTGELTT 336

Query: 182  SDVERILNAKTVTATSAMAPAHGLYLGRVKYKLP 81
            SDVERILNAKTVTA S MAPA+GLYLG VKY LP
Sbjct: 337  SDVERILNAKTVTAASPMAPAYGLYLGCVKYDLP 370


>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Glycine max]
          Length = 369

 Score =  421 bits (1081), Expect = e-115
 Identities = 216/331 (65%), Positives = 254/331 (76%), Gaps = 2/331 (0%)
 Frame = -3

Query: 1067 INNNPR--MQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSSRTD 894
            ++ NPR  +QRYLVA EY G  F GSQ+Q   RTV+G L+EAF +F+GQPV +  SSRTD
Sbjct: 40   MSQNPRNGIQRYLVAIEYIGTLFSGSQKQLNVRTVVGALEEAFSKFVGQPVSVSCSSRTD 99

Query: 893  AGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCIPAD 714
            AGVHALSNVCHVD++RISKRRPGEVLPP+EP VV  AVNH+L K++ D+ V+DVRC+P+D
Sbjct: 100  AGVHALSNVCHVDIQRISKRRPGEVLPPHEPAVVGRAVNHFLQKHDSDLMVIDVRCVPSD 159

Query: 713  FHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFSSFR 534
            FHAR +A ERTYFYR+LSGPEPLSTFE+ RAWHV EEL + A+Q+ACRVLVG HDFSSFR
Sbjct: 160  FHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGCHDFSSFR 219

Query: 533  GTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGVDVTCKVPI 354
              GCQAKSPI+TL ELSV EV  +PYFPS ++R+Q N +  D    S+ +  D+    PI
Sbjct: 220  AAGCQAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCSNNTETDIP---PI 276

Query: 353  SIKDKLXXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITTSDV 174
            S                G+R+ HRC V+TARARSFLYHQVRLLVGVLKAAGTG +T  DV
Sbjct: 277  SNPSIDKVITSSQDAGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAAGTGNLTIPDV 336

Query: 173  ERILNAKTVTATSAMAPAHGLYLGRVKYKLP 81
            ERILNAKTVTA S MAPA GLYLG VKY LP
Sbjct: 337  ERILNAKTVTAASPMAPACGLYLGEVKYDLP 367


>ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223534233|gb|EEF35948.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 372

 Score =  420 bits (1080), Expect = e-115
 Identities = 211/329 (64%), Positives = 256/329 (77%)
 Frame = -3

Query: 1067 INNNPRMQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSSRTDAG 888
            +++NP++QRYL+A EY G KF GSQ+Q   RTV+GVL+EAF +FIGQ V +  SSRTDAG
Sbjct: 47   MSSNPKLQRYLIAVEYIGTKFAGSQKQLNGRTVVGVLEEAFCKFIGQQVSVSLSSRTDAG 106

Query: 887  VHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCIPADFH 708
            VHALSNVCHVD+ERISKR+PGEVLPP+EP VVR AVNH+L K EGD+ V DVRC+P+DFH
Sbjct: 107  VHALSNVCHVDIERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDIMVTDVRCVPSDFH 166

Query: 707  ARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFSSFRGT 528
            AR +A ERTYFYR LSGPEPLSTFE+ RAWHV E+LDIVA+Q+AC+VLVG HDFSSFR +
Sbjct: 167  ARFKAQERTYFYRFLSGPEPLSTFEKDRAWHVLEDLDIVAMQEACKVLVGHHDFSSFRAS 226

Query: 527  GCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGVDVTCKVPISI 348
            GCQAKSPI+TL E+SV+EVAST YFPS  ER+Q     ++       + + +      ++
Sbjct: 227  GCQAKSPIRTLAEISVSEVASTLYFPSITEREQNCENGENSCCKKFKTDLPMGSHSNTNV 286

Query: 347  KDKLXXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITTSDVER 168
             +               R+ HRC+V+TARARSFLYHQVRLLVGVLK+ G G++TTSDVER
Sbjct: 287  AESSFGETDLGFGI---RRRHRCFVVTARARSFLYHQVRLLVGVLKSVGIGDLTTSDVER 343

Query: 167  ILNAKTVTATSAMAPAHGLYLGRVKYKLP 81
            IL+AK+VTA S MAPA GLYLG VKY LP
Sbjct: 344  ILSAKSVTAASPMAPARGLYLGHVKYDLP 372


>ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutrema salsugineum]
            gi|557095305|gb|ESQ35887.1| hypothetical protein
            EUTSA_v10007981mg [Eutrema salsugineum]
          Length = 368

 Score =  419 bits (1078), Expect = e-114
 Identities = 213/329 (64%), Positives = 251/329 (76%)
 Frame = -3

Query: 1067 INNNPRMQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSSRTDAG 888
            ++ NPR+QRYLVA EY G +F GSQQQA  RTV+GVLQEAF +FIGQPVKI  SSRTDAG
Sbjct: 52   LSMNPRVQRYLVAIEYIGTRFSGSQQQATDRTVVGVLQEAFHKFIGQPVKIFCSSRTDAG 111

Query: 887  VHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCIPADFH 708
            VHALSNVCHVDVERISKR+PGEVLPP+EP VV+ AVNH+L + +GDV V+DVRC+P+++H
Sbjct: 112  VHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRNDGDVMVIDVRCVPSNYH 171

Query: 707  ARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFSSFRGT 528
            AR++A ERTYFYR+LSG +PLS  E+ RAWHV EELD+ ++Q+ACRVLVG HDFSSFR  
Sbjct: 172  ARYKARERTYFYRLLSGSDPLSILEKDRAWHVPEELDLRSMQEACRVLVGTHDFSSFRAA 231

Query: 527  GCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGVDVTCKVPISI 348
            GCQAKSPI++L EL+VTEV STPYFPS  ER  +     DP+  SS +  + T  V    
Sbjct: 232  GCQAKSPIRSLDELNVTEVPSTPYFPSITERTPSYLNNGDPLACSSQAKTE-TAGVSTDG 290

Query: 347  KDKLXXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITTSDVER 168
             D               R+ HRCYV+TAR R+FLYHQVRLLV  LK  GTGE+T SDVER
Sbjct: 291  GDTFGV-----------RRRHRCYVVTARGRAFLYHQVRLLVAALKCVGTGELTVSDVER 339

Query: 167  ILNAKTVTATSAMAPAHGLYLGRVKYKLP 81
            IL AKTVTA   MAPA GLYL RVKY+ P
Sbjct: 340  ILKAKTVTAAKPMAPACGLYLARVKYEFP 368


>gb|EYU26478.1| hypothetical protein MIMGU_mgv1a018737mg [Mimulus guttatus]
          Length = 374

 Score =  419 bits (1076), Expect = e-114
 Identities = 211/326 (64%), Positives = 251/326 (76%)
 Frame = -3

Query: 1058 NPRMQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSSRTDAGVHA 879
            NPR+QRYLVA EY G +F G+QQQ   RTV+GVL++AF++FIGQPV I  SSRTDAGVHA
Sbjct: 56   NPRIQRYLVAIEYLGTRFSGAQQQPTGRTVVGVLEDAFQKFIGQPVSIFCSSRTDAGVHA 115

Query: 878  LSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCIPADFHARH 699
            LSNVCHVD+ER SKR+PGEVLPP+EP VV++AVNH+L K EGD+ V+DV+C+PADFH+R+
Sbjct: 116  LSNVCHVDIERTSKRKPGEVLPPHEPSVVKSAVNHFLQKNEGDMMVIDVKCVPADFHSRY 175

Query: 698  RALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFSSFRGTGCQ 519
            +A ERTYFYR+LSG EPLSTFE+ RAWHV EELDI+++QKAC+VL+G HDFSSFR + CQ
Sbjct: 176  KAQERTYFYRLLSGMEPLSTFEKNRAWHVPEELDILSMQKACQVLIGRHDFSSFRASACQ 235

Query: 518  AKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGVDVTCKVPISIKDK 339
            AKSPIKTL ELSVTEVAS  YFPS  ER Q+N   +  +  S+ S  D       S+   
Sbjct: 236  AKSPIKTLDELSVTEVASGTYFPSPAERKQSNYTTEGLVSISNKSETD-------SVNGN 288

Query: 338  LXXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITTSDVERILN 159
                          RK HRC V+TAR RSFLYHQVRLLVGVLK+ GTG++T SDVERIL 
Sbjct: 289  SVGEAIQGFGI---RKRHRCIVVTARGRSFLYHQVRLLVGVLKSVGTGDLTVSDVERILK 345

Query: 158  AKTVTATSAMAPAHGLYLGRVKYKLP 81
            AK +   S MAPA GLYLG+VKY LP
Sbjct: 346  AKDIRTASPMAPAGGLYLGQVKYDLP 371


>ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Solanum
            tuberosum]
          Length = 389

 Score =  418 bits (1074), Expect = e-114
 Identities = 208/331 (62%), Positives = 258/331 (77%), Gaps = 2/331 (0%)
 Frame = -3

Query: 1067 INNNPRMQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSSRTDAG 888
            +N NPR+QRYL+A EY G +F G+QQQ   RTV+GVLQEAF++F+GQPV +  SSRTDAG
Sbjct: 56   MNPNPRLQRYLIAIEYIGTRFAGAQQQPNCRTVVGVLQEAFQKFVGQPVSVFCSSRTDAG 115

Query: 887  VHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCIPADFH 708
            VHALSNVCHVDVERISKR+PG+VLPP+EP VV+ AVNH+L K EGD+ V+DVRC+PADFH
Sbjct: 116  VHALSNVCHVDVERISKRKPGDVLPPHEPLVVKRAVNHFLQKNEGDIMVIDVRCVPADFH 175

Query: 707  ARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFSSFRGT 528
            AR++A ERTYFYR+LSGPE +S+FER RAWHV E LD++A+QKAC +L+G HDFSSFR  
Sbjct: 176  ARYKAQERTYFYRLLSGPESVSSFERDRAWHVPENLDLLAMQKACNILIGRHDFSSFRAA 235

Query: 527  GCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVS--SSTSGVDVTCKVPI 354
             CQA SPI+TL EL+V EV STP+FPS  ER +++ + +DP VS  S T+   ++     
Sbjct: 236  ACQANSPIRTLDELNVIEVVSTPFFPSISERLKSSSVMEDPTVSLGSDTNHSQISLN--- 292

Query: 353  SIKDKLXXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITTSDV 174
            + ++KL           G R+ HRC+V+TARARSFLYHQVRLLVGVLK+ G G +T  DV
Sbjct: 293  TNEEKLEGSNGEACQEFGLRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGAGVLTDPDV 352

Query: 173  ERILNAKTVTATSAMAPAHGLYLGRVKYKLP 81
            +RIL AK++TA   MAPA GLYLG VKY LP
Sbjct: 353  KRILEAKSITAAPPMAPACGLYLGHVKYDLP 383


>ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-like isoform X1 [Cicer
            arietinum]
          Length = 374

 Score =  418 bits (1074), Expect = e-114
 Identities = 211/330 (63%), Positives = 253/330 (76%), Gaps = 1/330 (0%)
 Frame = -3

Query: 1067 INNNPRMQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSSRTDAG 888
            +N + R+QRYLVA EY G  F GSQ+Q   RTV+GVL+EAF +F+GQPV +I SSRTDAG
Sbjct: 48   MNQHRRIQRYLVAIEYIGTHFSGSQKQLTDRTVVGVLEEAFCKFVGQPVSVICSSRTDAG 107

Query: 887  VHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCIPADFH 708
            VHALSNVCHVD+ERISKR+PGEVLPP+EP VVR AVNH+L K  GD+ V+DVRC+P+DFH
Sbjct: 108  VHALSNVCHVDIERISKRKPGEVLPPHEPVVVRRAVNHFLQKQNGDLMVIDVRCVPSDFH 167

Query: 707  ARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFSSFRGT 528
            AR++A ERTYFYR+LSG EPLST E+ RAWHV EEL++ A+Q+ACRVLVG HDFSSFR  
Sbjct: 168  ARYKAQERTYFYRLLSGSEPLSTLEKDRAWHVPEELNLPAMQEACRVLVGHHDFSSFRAA 227

Query: 527  GCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGVDVTCKVPISI 348
            GCQAKSPI+TL ELSV EV  +PYFPS ++R++   +  D        G +    +P+S 
Sbjct: 228  GCQAKSPIRTLDELSVVEVIQSPYFPSVMDRERQIKVADD----LHGCGSNAEAVIPVSS 283

Query: 347  KDKL-XXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITTSDVE 171
              ++            G+R+ HRC V+TARAR+FLYHQVRLLVGVLKA GTG +T  DVE
Sbjct: 284  SARIDKVRASNEGVGFGKRRYHRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTIPDVE 343

Query: 170  RILNAKTVTATSAMAPAHGLYLGRVKYKLP 81
            RILNAKTVTA S MAPA GLYLG VKY LP
Sbjct: 344  RILNAKTVTAASPMAPACGLYLGEVKYDLP 373


>ref|NP_172451.2| pseudouridine synthase family protein [Arabidopsis thaliana]
            gi|332190374|gb|AEE28495.1| pseudouridine synthase family
            protein [Arabidopsis thaliana]
          Length = 372

 Score =  416 bits (1068), Expect = e-113
 Identities = 208/326 (63%), Positives = 252/326 (77%)
 Frame = -3

Query: 1058 NPRMQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSSRTDAGVHA 879
            NPR+QRYLVA EY G +F GSQQQA  RTV+GVLQEAF +FIGQPVKI  SSRTDAGVHA
Sbjct: 51   NPRVQRYLVAIEYIGTRFSGSQQQAKDRTVVGVLQEAFHKFIGQPVKIFCSSRTDAGVHA 110

Query: 878  LSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCIPADFHARH 699
            LSNVCHVDVERISKR+PGEVLPP+EP VV+ AVNH+L + +GDV V+DVRC+P+++HAR+
Sbjct: 111  LSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDVRCVPSNYHARY 170

Query: 698  RALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFSSFRGTGCQ 519
            +A ERTYFYR+LSG +PLS  E+ R WHV EEL++  +Q+ACRVLVG HDFSSFR  GCQ
Sbjct: 171  KAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRFMQEACRVLVGSHDFSSFRAAGCQ 230

Query: 518  AKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGVDVTCKVPISIKDK 339
            AKSP+++L EL++TEV STPYFPS  ER  +N    DP+  S+    + T  V  ++ + 
Sbjct: 231  AKSPMRSLDELNITEVPSTPYFPSITERTLSNLNNGDPLACSNQPKSE-TAGVTTNVGE- 288

Query: 338  LXXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITTSDVERILN 159
                        GRR+ HRCYV+TAR+R FLYHQVRL+VG LK  GTGE+T SDVERIL 
Sbjct: 289  --VEGSTEGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILE 346

Query: 158  AKTVTATSAMAPAHGLYLGRVKYKLP 81
            AKTV+A   MAPA GLYL RV+Y+ P
Sbjct: 347  AKTVSAAKPMAPASGLYLARVRYEFP 372


>dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana]
            gi|51971573|dbj|BAD44451.1| unnamed protein product
            [Arabidopsis thaliana]
          Length = 368

 Score =  416 bits (1068), Expect = e-113
 Identities = 208/326 (63%), Positives = 252/326 (77%)
 Frame = -3

Query: 1058 NPRMQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSSRTDAGVHA 879
            NPR+QRYLVA EY G +F GSQQQA  RTV+GVLQEAF +FIGQPVKI  SSRTDAGVHA
Sbjct: 47   NPRVQRYLVAIEYIGTRFSGSQQQAKDRTVVGVLQEAFHKFIGQPVKIFCSSRTDAGVHA 106

Query: 878  LSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCIPADFHARH 699
            LSNVCHVDVERISKR+PGEVLPP+EP VV+ AVNH+L + +GDV V+DVRC+P+++HAR+
Sbjct: 107  LSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDVRCVPSNYHARY 166

Query: 698  RALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFSSFRGTGCQ 519
            +A ERTYFYR+LSG +PLS  E+ R WHV EEL++  +Q+ACRVLVG HDFSSFR  GCQ
Sbjct: 167  KAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRFMQEACRVLVGSHDFSSFRAAGCQ 226

Query: 518  AKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGVDVTCKVPISIKDK 339
            AKSP+++L EL++TEV STPYFPS  ER  +N    DP+  S+    + T  V  ++ + 
Sbjct: 227  AKSPMRSLDELNITEVPSTPYFPSITERTLSNLNNGDPLACSNQPKSE-TAGVTTNVGE- 284

Query: 338  LXXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITTSDVERILN 159
                        GRR+ HRCYV+TAR+R FLYHQVRL+VG LK  GTGE+T SDVERIL 
Sbjct: 285  --VEGSTGGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILE 342

Query: 158  AKTVTATSAMAPAHGLYLGRVKYKLP 81
            AKTV+A   MAPA GLYL RV+Y+ P
Sbjct: 343  AKTVSAAKPMAPASGLYLARVRYEFP 368


>gb|AAT06466.1| At1g09800 [Arabidopsis thaliana]
          Length = 372

 Score =  416 bits (1068), Expect = e-113
 Identities = 208/326 (63%), Positives = 252/326 (77%)
 Frame = -3

Query: 1058 NPRMQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSSRTDAGVHA 879
            NPR+QRYLVA EY G +F GSQQQA  RTV+GVLQEAF +FIGQPVKI  SSRTDAGVHA
Sbjct: 51   NPRVQRYLVAIEYIGTRFSGSQQQAKDRTVVGVLQEAFHKFIGQPVKIFCSSRTDAGVHA 110

Query: 878  LSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCIPADFHARH 699
            LSNVCHVDVERISKR+PGEVLPP+EP VV+ AVNH+L + +GDV V+DVRC+P+++HAR+
Sbjct: 111  LSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDVRCVPSNYHARY 170

Query: 698  RALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFSSFRGTGCQ 519
            +A ERTYFYR+LSG +PLS  E+ R WHV EEL++  +Q+ACRVLVG HDFSSFR  GCQ
Sbjct: 171  KAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRFMQEACRVLVGSHDFSSFRAAGCQ 230

Query: 518  AKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGVDVTCKVPISIKDK 339
            AKSP+++L EL++TEV STPYFPS  ER  +N    DP+  S+    + T  V  ++ + 
Sbjct: 231  AKSPMRSLDELNITEVPSTPYFPSITERTLSNLNNGDPLACSNQPKSE-TAGVTTNVGE- 288

Query: 338  LXXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITTSDVERILN 159
                        GRR+ HRCYV+TAR+R FLYHQVRL+VG LK  GTGE+T SDVERIL 
Sbjct: 289  --VEGSTGGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILE 346

Query: 158  AKTVTATSAMAPAHGLYLGRVKYKLP 81
            AKTV+A   MAPA GLYL RV+Y+ P
Sbjct: 347  AKTVSAAKPMAPASGLYLARVRYEFP 372


>ref|XP_006305124.1| hypothetical protein CARUB_v10009493mg [Capsella rubella]
            gi|482573835|gb|EOA38022.1| hypothetical protein
            CARUB_v10009493mg [Capsella rubella]
          Length = 370

 Score =  413 bits (1062), Expect = e-113
 Identities = 211/326 (64%), Positives = 253/326 (77%)
 Frame = -3

Query: 1058 NPRMQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSSRTDAGVHA 879
            NPR+QRYLVA EY G +F GSQQQA  RTV+GVLQEAF +FIGQPVKI  SSRTDAGVHA
Sbjct: 50   NPRLQRYLVAIEYIGTRFSGSQQQATDRTVVGVLQEAFHKFIGQPVKIFCSSRTDAGVHA 109

Query: 878  LSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCIPADFHARH 699
            LSNVCHVDVERISKR+PGEVLPP+EP VV+ AVNH+L + +GDV V+DVRC+P+++HAR+
Sbjct: 110  LSNVCHVDVERISKRKPGEVLPPHEPGVVQKAVNHFLQRKDGDVMVIDVRCVPSNYHARY 169

Query: 698  RALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFSSFRGTGCQ 519
            +A ERTYFYRILSG +PLS  E+ R WHV EEL++ ++Q+AC+VLVG HDFSSFR  GCQ
Sbjct: 170  KARERTYFYRILSGSDPLSILEKDRCWHVPEELNLRSMQEACKVLVGTHDFSSFRAAGCQ 229

Query: 518  AKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGVDVTCKVPISIKDK 339
            AKS +++L ELSVTEV STPYFPS  ER  +N    DP   SS    + T  V  ++ + 
Sbjct: 230  AKSAMRSLDELSVTEVPSTPYFPSITER-ASNLNNGDPFACSSQHKTE-TAGVGTNVGE- 286

Query: 338  LXXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITTSDVERILN 159
                        G R+ HRCYV+TAR+R FLYHQVRLLVGVLK+ GTGE+T +DVERIL 
Sbjct: 287  --VEGSTDGDSFGARRRHRCYVVTARSRGFLYHQVRLLVGVLKSVGTGELTVADVERILE 344

Query: 158  AKTVTATSAMAPAHGLYLGRVKYKLP 81
            AKTV+A+  MAPA GLYL RVKY+ P
Sbjct: 345  AKTVSASKPMAPASGLYLARVKYEFP 370


>ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum lycopersicum]
          Length = 389

 Score =  412 bits (1060), Expect = e-112
 Identities = 206/331 (62%), Positives = 255/331 (77%), Gaps = 2/331 (0%)
 Frame = -3

Query: 1067 INNNPRMQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSSRTDAG 888
            +N NPR+QRYL+A EY G +F G+QQQ   RTV+GVLQEAF++FIGQPV +  SSRTDAG
Sbjct: 56   MNPNPRLQRYLLAIEYIGTRFAGAQQQPNCRTVVGVLQEAFQKFIGQPVSVFCSSRTDAG 115

Query: 887  VHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCIPADFH 708
            VHALSNVCHVDVERISKR+PG+VLPP+EP VV+ AVNH+L K  GD+ V+DVRC+P DFH
Sbjct: 116  VHALSNVCHVDVERISKRKPGDVLPPHEPLVVKRAVNHFLQKNAGDIMVIDVRCVPDDFH 175

Query: 707  ARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFSSFRGT 528
            AR++A ERTYFYR+LSGPEP+S+FER RAWHV E LD++A+QKAC +L+G HDFSSFR  
Sbjct: 176  ARYKAQERTYFYRLLSGPEPVSSFERDRAWHVPENLDLLAMQKACNILIGRHDFSSFRAA 235

Query: 527  GCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIV--SSSTSGVDVTCKVPI 354
             CQA SPI+TL EL+V EV STP+FPS  ER +++ + +DP V   S T+   ++     
Sbjct: 236  ACQANSPIRTLDELNVIEVVSTPFFPSISERLKSSSVMEDPTVYLGSDTNHSQISFN--- 292

Query: 353  SIKDKLXXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITTSDV 174
            + + KL           G R+ HRC+V+TARARSFLYHQVRLLVGVLK+ G G++T  DV
Sbjct: 293  TNEGKLEGSNGEACQEFGLRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGAGDLTDPDV 352

Query: 173  ERILNAKTVTATSAMAPAHGLYLGRVKYKLP 81
            +RIL AK++ A   MAPA GLYLG VKY LP
Sbjct: 353  KRILEAKSIAAAPPMAPACGLYLGHVKYDLP 383


>ref|XP_002892526.1| hypothetical protein ARALYDRAFT_471082 [Arabidopsis lyrata subsp.
            lyrata] gi|297338368|gb|EFH68785.1| hypothetical protein
            ARALYDRAFT_471082 [Arabidopsis lyrata subsp. lyrata]
          Length = 373

 Score =  412 bits (1059), Expect = e-112
 Identities = 208/326 (63%), Positives = 251/326 (76%)
 Frame = -3

Query: 1058 NPRMQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSSRTDAGVHA 879
            NPR+QRYLVA EY G +F GSQQQA  RTV+GVLQ+AF +FIGQPVKI  SSRTDAGVHA
Sbjct: 52   NPRVQRYLVAIEYIGTRFSGSQQQAKDRTVVGVLQDAFHKFIGQPVKIFCSSRTDAGVHA 111

Query: 878  LSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCIPADFHARH 699
            LSNVCHVDVERISKR+PGEVLPP+EP VV+ AVNH+L + +GDV V+DVRC+P+++HAR+
Sbjct: 112  LSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDVRCVPSNYHARY 171

Query: 698  RALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFSSFRGTGCQ 519
            +A ERTYFYR+L+G +PLS  E+ R WHV EEL+  ++Q+ACRVLVG HDFSSFR  GCQ
Sbjct: 172  KAQERTYFYRLLAGSDPLSILEKDRCWHVPEELNPRSMQEACRVLVGYHDFSSFRAAGCQ 231

Query: 518  AKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGVDVTCKVPISIKDK 339
            AKSP++ L EL++TEV STPYFPS  ER  +N    DP+  SS    + T  V  ++ + 
Sbjct: 232  AKSPMRYLDELNITEVPSTPYFPSITERAWSNLNNGDPLACSSQPKSE-TAGVTTNVGE- 289

Query: 338  LXXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITTSDVERILN 159
                        GRR+ HRCYV+TAR+R FLYHQVRL+VG LK  GTGE+T SDVERIL 
Sbjct: 290  --VEGSTDGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILE 347

Query: 158  AKTVTATSAMAPAHGLYLGRVKYKLP 81
            AKTV+A   MAPA GLYL RVKY+ P
Sbjct: 348  AKTVSAAKPMAPASGLYLARVKYEFP 373


>gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]
          Length = 361

 Score =  410 bits (1054), Expect = e-112
 Identities = 206/329 (62%), Positives = 256/329 (77%), Gaps = 1/329 (0%)
 Frame = -3

Query: 1064 NNNPRMQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSSRTDAGV 885
            +++ ++QRYLVA EY G +FFG Q+Q   RTV GVL++AF +F+GQPV ++ SSRTDAGV
Sbjct: 36   HHHRKIQRYLVAVEYIGTRFFGFQKQLTDRTVAGVLEDAFCKFVGQPVSVVCSSRTDAGV 95

Query: 884  HALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCIPADFHA 705
            HALSNVCHVD+ERISKR+PGEVL P+EP VVR AVNH+L K  GD+AV+DVRC+P+DFHA
Sbjct: 96   HALSNVCHVDIERISKRKPGEVLQPHEPAVVRRAVNHFLQKENGDLAVIDVRCVPSDFHA 155

Query: 704  RHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFSSFRGTG 525
            R++A ERTYFYR+LSGPE LSTFE+ RAWH+ EEL++ A+Q+AC+VLVG HDFSSFR +G
Sbjct: 156  RYKAQERTYFYRLLSGPETLSTFEKDRAWHIPEELNLPAMQEACKVLVGHHDFSSFRASG 215

Query: 524  CQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGVDVTCKVPISIK 345
            CQAKSPI++L ELSV EV  +PYFPS ++R+  NP+     +    S  +    +P+   
Sbjct: 216  CQAKSPIRSLDELSVVEVTRSPYFPSVMDRE--NPINVTDDLHCFHSNSETV--IPLGSS 271

Query: 344  DKL-XXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITTSDVER 168
             ++            G+R+ HRC V+TARAR+FLYHQVRLLVGVLK  GTG IT +DVER
Sbjct: 272  ARIDEVSASKEDVGFGKRRYHRCLVVTARARAFLYHQVRLLVGVLKDVGTGNITVTDVER 331

Query: 167  ILNAKTVTATSAMAPAHGLYLGRVKYKLP 81
            ILNAKTVTATS MAPA GLYLG VKY LP
Sbjct: 332  ILNAKTVTATSPMAPACGLYLGEVKYDLP 360


>ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Populus trichocarpa]
            gi|550312358|gb|ERP48449.1| hypothetical protein
            POPTR_0022s00690g [Populus trichocarpa]
          Length = 370

 Score =  410 bits (1053), Expect = e-112
 Identities = 214/325 (65%), Positives = 248/325 (76%), Gaps = 2/325 (0%)
 Frame = -3

Query: 1055 PRMQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSSRTDAGVHAL 876
            P +QRYLVA EY G +F GSQQQ   RTV+GVLQEAF +FIGQPV I  SSRTDAGVHAL
Sbjct: 47   PGLQRYLVAVEYIGTRFCGSQQQLNHRTVVGVLQEAFHKFIGQPVTICLSSRTDAGVHAL 106

Query: 875  SNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCIPADFHARHR 696
            SNVCHVDVERISKR+PGEVLPP+EP VVR AVNH+L K EGD+ V DVR +PA FHAR +
Sbjct: 107  SNVCHVDVERISKRKPGEVLPPHEPAVVRKAVNHFLQKKEGDIMVTDVRSVPAHFHARFK 166

Query: 695  ALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFSSFRGTGCQA 516
            A ERTYFYR+L GPE LSTFE+ RAWHV EELD+V++Q+AC+VLVG HDFSSFR +GCQA
Sbjct: 167  AQERTYFYRLLIGPELLSTFEKDRAWHVSEELDLVSMQEACKVLVGHHDFSSFRASGCQA 226

Query: 515  KSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDP--IVSSSTSGVDVTCKVPISIKD 342
            KSP +TL ELSV EV STPYFPS  ER+Q +   + P    +   +G+       IS   
Sbjct: 227  KSPFRTLEELSVLEVVSTPYFPSITEREQNSSNGEGPHSFHNKCKTGLPTG---SISNGF 283

Query: 341  KLXXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITTSDVERIL 162
                         G R+ HRCYVITAR+RSFLYHQVRLLVGVLK+ GTG++T SDVERIL
Sbjct: 284  MAGGSNSGTDLGFGIRRRHRCYVITARSRSFLYHQVRLLVGVLKSVGTGDLTVSDVERIL 343

Query: 161  NAKTVTATSAMAPAHGLYLGRVKYK 87
            NA+++TA S MAPA GLYLG VKY+
Sbjct: 344  NARSITAASPMAPACGLYLGHVKYE 368


>ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca subsp.
            vesca]
          Length = 350

 Score =  410 bits (1053), Expect = e-112
 Identities = 214/335 (63%), Positives = 254/335 (75%)
 Frame = -3

Query: 1085 LQKPQIINNNPRMQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISS 906
            + KPQ I      QRYL+A EY G +F GSQQQ+  RTV+GVL+EAFR+FIGQPV I  S
Sbjct: 35   MSKPQGI------QRYLIAIEYIGTRFSGSQQQSNCRTVVGVLEEAFRKFIGQPVSIFCS 88

Query: 905  SRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRC 726
            SRTDAGVHALSNVCHVD+ERISKR+PGEVLPP+EP VV+ AVNH+L K EGDV VVDVR 
Sbjct: 89   SRTDAGVHALSNVCHVDIERISKRKPGEVLPPHEPIVVQRAVNHFLQKNEGDVMVVDVRS 148

Query: 725  IPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDF 546
            +PADFHAR +A ERTYFYR+LSGPEPLSTFE+ RAWH+ EELD++A+Q+AC++LVG HDF
Sbjct: 149  VPADFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHIPEELDVLAMQEACKILVGHHDF 208

Query: 545  SSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGVDVTC 366
            SSFR  GCQAKSPI+TL EL+V+EV S+P FP+  ER + N +++D      T+  +  C
Sbjct: 209  SSFRAAGCQAKSPIRTLDELNVSEVVSSPNFPTIAERTR-NLVQKD---IQCTNNPEADC 264

Query: 365  KVPISIKDKLXXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEIT 186
                +                G RK HRC V+TARAR+FLYHQVRLLVGVLK  GTG++ 
Sbjct: 265  HSSFN---------GGTDQGFGLRKKHRCIVVTARARAFLYHQVRLLVGVLKCVGTGDLK 315

Query: 185  TSDVERILNAKTVTATSAMAPAHGLYLGRVKYKLP 81
              DVERILNAKTVTA S MAPA GLYLG V+Y LP
Sbjct: 316  IPDVERILNAKTVTAASPMAPACGLYLGHVRYDLP 350


>ref|XP_002441964.1| hypothetical protein SORBIDRAFT_08g005650 [Sorghum bicolor]
            gi|241942657|gb|EES15802.1| hypothetical protein
            SORBIDRAFT_08g005650 [Sorghum bicolor]
          Length = 387

 Score =  410 bits (1053), Expect = e-112
 Identities = 211/331 (63%), Positives = 248/331 (74%), Gaps = 6/331 (1%)
 Frame = -3

Query: 1058 NPRMQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSSRTDAGVHA 879
            NPR QRYLVA EY G +F GSQQQ  +RTV+GVL+EAF RFIGQPV I  SSRTDAGVHA
Sbjct: 62   NPRAQRYLVAVEYIGTRFSGSQQQPNQRTVVGVLEEAFHRFIGQPVSIFCSSRTDAGVHA 121

Query: 878  LSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCIPADFHARH 699
            LSNVCHVDVERISKR+PGEVL P+EP VV+ AVNH+LLK EGD+ V DVRC+  DFHAR+
Sbjct: 122  LSNVCHVDVERISKRKPGEVLTPHEPGVVKRAVNHFLLKNEGDIMVTDVRCVAPDFHARY 181

Query: 698  RALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFSSFRGTGCQ 519
            +ALERTY YR+LSGPE  S FE   AWH+ E+LDI A++KAC +LVG HDFSSFR  GCQ
Sbjct: 182  KALERTYHYRLLSGPESTSVFETNSAWHISEDLDIQAMKKACSILVGHHDFSSFRAAGCQ 241

Query: 518  AKSPIKTLTELSVTEVASTPYFPSKVERDQANP------MEQDPIVSSSTSGVDVTCKVP 357
            A SP++TL ELSVTEV    +FPS VER Q           + P + SS  G D+ C   
Sbjct: 242  ANSPMRTLDELSVTEVFPFMFFPSSVERSQLESSNGSLVYSRTPDIESSGKGSDLCC--T 299

Query: 356  ISIKDKLXXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITTSD 177
             S+K +L           G+R  HRC+V+TARARSFLYHQVRL+VG+LK+ GTG++TT+D
Sbjct: 300  SSVKSEL-----ENGEDFGKRSRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTAD 354

Query: 176  VERILNAKTVTATSAMAPAHGLYLGRVKYKL 84
            VERIL+AKTVTA   MAPA+GLYL  VKY L
Sbjct: 355  VERILDAKTVTAAPRMAPAYGLYLANVKYDL 385


>ref|XP_007148561.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
            gi|561021784|gb|ESW20555.1| hypothetical protein
            PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 373

 Score =  408 bits (1049), Expect = e-111
 Identities = 206/331 (62%), Positives = 251/331 (75%), Gaps = 2/331 (0%)
 Frame = -3

Query: 1067 INNNPR--MQRYLVAFEYHGGKFFGSQQQAVRRTVIGVLQEAFRRFIGQPVKIISSSRTD 894
            +  NPR  +QRY +A EY G +F GSQ+Q   RTV+G L+EAF +F+G PV +  SSRTD
Sbjct: 44   MTQNPRNGIQRYFLAIEYIGTRFSGSQKQLTCRTVVGALEEAFAKFVGHPVSVSCSSRTD 103

Query: 893  AGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVRCIPAD 714
            AGVHALSNVCHVD++R SKR+PGEVLPP+EP VV  AVNH+L K++ D+ V+DVRC+P+D
Sbjct: 104  AGVHALSNVCHVDIQRTSKRKPGEVLPPHEPAVVGRAVNHFLQKHDSDLTVIDVRCVPSD 163

Query: 713  FHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHDFSSFR 534
            FHAR++ALERTYFYR+LSGPEPLSTFE+ RAWHV EEL++ A+Q+ACRVLVG HDFSSFR
Sbjct: 164  FHARYKALERTYFYRLLSGPEPLSTFEKDRAWHVSEELNLPAMQEACRVLVGSHDFSSFR 223

Query: 533  GTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGVDVTCKVPI 354
              GCQAKSPI+TL EL+V+EV  + +FPS ++R+  + +  DP    S S  D+      
Sbjct: 224  AAGCQAKSPIRTLDELNVSEVIESLHFPSVMDREGHDKVSSDPRSYPSNSETDIPPSSSP 283

Query: 353  SIKDKLXXXXXXXXXXXGRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEITTSDV 174
             I DK+            RR  HRC V+TARARSFLYHQVRLLVGVLKA GTG +T  DV
Sbjct: 284  CI-DKVTTSSEDVGFGKRRR--HRCLVVTARARSFLYHQVRLLVGVLKAVGTGNLTIPDV 340

Query: 173  ERILNAKTVTATSAMAPAHGLYLGRVKYKLP 81
            ERILNAK+VT+ S MAPA GLYLG VKY LP
Sbjct: 341  ERILNAKSVTSASPMAPACGLYLGEVKYDLP 371