BLASTX nr result
ID: Papaver25_contig00022708
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00022708
(448 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCH50966.1| T4.5 [Malus x robusta] 116 4e-24
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [... 107 2e-21
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 104 1e-20
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc... 103 3e-20
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 103 3e-20
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 102 5e-20
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera] 100 2e-19
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja... 100 2e-19
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 100 4e-19
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group] 99 8e-19
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 98 1e-18
emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera] 96 5e-18
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] 96 7e-18
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group] 95 9e-18
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc... 95 9e-18
emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group] 95 9e-18
gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group... 95 1e-17
gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr... 95 1e-17
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 95 1e-17
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho... 95 1e-17
>emb|CCH50966.1| T4.5 [Malus x robusta]
Length = 1670
Score = 116 bits (290), Expect = 4e-24
Identities = 66/153 (43%), Positives = 88/153 (57%), Gaps = 11/153 (7%)
Frame = +3
Query: 21 SFCLNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHKHGLYP 200
+F LN++LLVP ASHNLLSV+KF DN C +TF GF VKDL +G+ L QGP + GLYP
Sbjct: 644 TFRLNDVLLVPQASHNLLSVYKFVYDNWCYLTFDPFGFYVKDLSTGKMLFQGPSEGGLYP 703
Query: 201 IKFTS---------SAKALSAHTPDITTLHRRLGHPSFQTIQKLKHQ--LNITNLSSQPF 347
+ + S AL DI T HRRLGHPS T+ + H+ L + +
Sbjct: 704 FYWNASNGVSGIAISPTALMIAKADIHTWHRRLGHPSGGTLHSVVHKNHLPVIGYVNNMS 763
Query: 348 FCNECKTCRSQKLPFQLSTNSTSTPLELLHMDL 446
C C+ +S +L F ++S PL+LLH D+
Sbjct: 764 VCTACQLGKSYRLSFSTLPCTSSRPLQLLHTDV 796
>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group] gi|31431217|gb|AAP53032.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1042
Score = 107 bits (267), Expect = 2e-21
Identities = 54/141 (38%), Positives = 84/141 (59%), Gaps = 2/141 (1%)
Frame = +3
Query: 30 LNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHKHGLYPIKF 209
LNN+L VP A+ NL+S K SDN+ + S F++KD + T+L+GP +HGLYP+
Sbjct: 275 LNNVLHVPQAAKNLISATKLASDNSVFVEIHSKYFLIKDRTTRSTVLKGPRRHGLYPLPS 334
Query: 210 TSSAKALSAHTPDITTLHRRLGHPSFQTIQKL--KHQLNITNLSSQPFFCNECKTCRSQK 383
TSS K A P + H RLGHPS + K+ ++L S++ C+ C+ +S +
Sbjct: 335 TSSTKQAFAVAPSLERWHSRLGHPSIPIVMKVISSNKLPCLRESNKESVCDACQKAKSHQ 394
Query: 384 LPFQLSTNSTSTPLELLHMDL 446
LP+ S + ++ PLEL++ D+
Sbjct: 395 LPYSNSMSVSNKPLELIYSDV 415
>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
Length = 1171
Score = 104 bits (259), Expect = 1e-20
Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 9/156 (5%)
Frame = +3
Query: 6 NANDQSFCLNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHK 185
N +F LN IL P A+ NL+S+++F DNNC ++ GF+VK+ ++GR LLQG +
Sbjct: 369 NFGQSNFHLNKILHCPQAATNLISINQFCLDNNCYFILTANGFVVKENLTGRILLQGVVE 428
Query: 186 HGLYPI----KFTSSAKALSAH---TPDITTLHRRLGHPSFQTIQKLKH--QLNITNLSS 338
+GLYP+ F S LS + T H RLGHPS L H +L++ S+
Sbjct: 429 NGLYPLAGCKTFHKSLTCLSTTIGVRANADTWHSRLGHPSSVIFNSLFHSNKLSVKGSST 488
Query: 339 QPFFCNECKTCRSQKLPFQLSTNSTSTPLELLHMDL 446
+ FC+ C+ ++++LPF S+ +S PL L+H D+
Sbjct: 489 KLEFCSACQLGKAKQLPFPESSRQSSVPLALIHSDV 524
>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 103 bits (256), Expect = 3e-20
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Frame = +3
Query: 30 LNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHKHGLYPIKF 209
L N+L VP A+ NL+SVHK +DN + F++KD + RT+L+GP + GLYP+
Sbjct: 378 LKNVLHVPEAAKNLVSVHKLVADNYAFLEIHGKYFLIKDKATRRTILEGPCRRGLYPLPA 437
Query: 210 TSSAKALSAHTPDITTLHRRLGHPSFQTIQKLKHQLNITNLSS--QPFFCNECKTCRSQK 383
SS + TP H RLGHPS + ++ Q + LS+ C+ C+ + +
Sbjct: 438 RSSLRQAFVATPSFVRWHGRLGHPSKPIVLRILSQNKLPCLSNSVNESVCDACQQAKCHQ 497
Query: 384 LPFQLSTNSTSTPLELLHMDL 446
LPF ST+ ++ PLEL+H D+
Sbjct: 498 LPFPRSTSVSNNPLELIHSDV 518
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 103 bits (256), Expect = 3e-20
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Frame = +3
Query: 30 LNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHKHGLYPIKF 209
L N+L VP A+ NL+SVHK +DN + F++KD + RT+L+GP + GLYP+
Sbjct: 369 LKNVLHVPEAAKNLVSVHKLVADNYAFLEIHGKYFLIKDKATRRTILEGPCRRGLYPLPA 428
Query: 210 TSSAKALSAHTPDITTLHRRLGHPSFQTIQKLKHQLNITNLSS--QPFFCNECKTCRSQK 383
SS + TP H RLGHPS + ++ Q + LS+ C+ C+ + +
Sbjct: 429 RSSLRQAFVATPSFVRWHGRLGHPSKPIVLRILSQNKLPCLSNSVNESVCDACQQAKCHQ 488
Query: 384 LPFQLSTNSTSTPLELLHMDL 446
LPF ST+ ++ PLEL+H D+
Sbjct: 489 LPFPRSTSVSNNPLELIHSDV 509
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 102 bits (254), Expect = 5e-20
Identities = 56/149 (37%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Frame = +3
Query: 6 NANDQSFCLNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHK 185
N N ++ L N+L VP A NL+SVH+ +DN+ + F +KD I+ +TLL+G
Sbjct: 369 NPNSRNIHLRNVLYVPQAKKNLVSVHRLVNDNSAFLELHRDYFFLKDQITRKTLLKGRSW 428
Query: 186 HGLYPIKFTSSAKALSAHTPDITTLHRRLGHPSFQTIQKL--KHQLNITNLSSQPFFCNE 359
LYP+ +S +A SA + H RLGHPS T++++ K L ++LSS+ CN
Sbjct: 429 RRLYPLPHSSLKQAYSAIKLSLDRWHHRLGHPSITTVKQVVNKFSLPCSDLSSES-VCNA 487
Query: 360 CKTCRSQKLPFQLSTNSTSTPLELLHMDL 446
C+ +S +LPF +S++ + PLEL+ D+
Sbjct: 488 CQQAKSHQLPFPISSSVSKHPLELVFSDV 516
>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
Length = 1172
Score = 100 bits (250), Expect = 2e-19
Identities = 59/152 (38%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Frame = +3
Query: 6 NANDQSFCLNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHK 185
+ ++ F L N+L VP NL+S+ K NN ITF + F+VKDL +G TLL+G K
Sbjct: 281 HTSNAQFSLTNVLCVPGMKKNLISISKLXISNNVSITFLPSSFLVKDLRTGATLLKGKTK 340
Query: 186 HGLYPIKFTSSAKALSAHTPDITTLHRRLGHPSFQTIQKLKHQLNITNL-----SSQPFF 350
G+Y +S A S+ + H RLGHP+F LKH ++ NL S F
Sbjct: 341 DGVYEWLVSSPLLAFSSVKTSSSEWHHRLGHPAFPI---LKHVISTNNLALSSSSLLHFS 397
Query: 351 CNECKTCRSQKLPFQLSTNSTSTPLELLHMDL 446
CN C +S KL F ST ++S PL++L+ D+
Sbjct: 398 CNTCHCNKSHKLSFSNSTINSSRPLQILYSDV 429
>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
Length = 1250
Score = 100 bits (249), Expect = 2e-19
Identities = 60/143 (41%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Frame = +3
Query: 24 FCLNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHKHGLYPI 203
F L NIL+ P+ NLLS+ +FT DNNC I F GF VK L + R +L+ + LY +
Sbjct: 412 FDLKNILVAPSLVRNLLSIRQFTRDNNCSIEFDEFGFSVKGLRTRRVILRCNSRGDLYTL 471
Query: 204 KFTSSAKALSAHTPDITTL-HRRLGHPSFQTIQKLKHQLNITNLSS-QPFFCNECKTCRS 377
+ A A + +TL HRRLGHPS IQ L H+L I + C+ CK +
Sbjct: 472 PIAAPAIAAHSFLAQSSTLWHRRLGHPSSAAIQTL-HKLAILPCTKIDHSLCHACKLGKH 530
Query: 378 QKLPFQLSTNSTSTPLELLHMDL 446
+LPF S +STS+P EL+H D+
Sbjct: 531 TRLPFSRSQSSTSSPFELVHCDV 553
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 99.8 bits (247), Expect = 4e-19
Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Frame = +3
Query: 30 LNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHKHGLYPI-- 203
L NIL VP NL+S H+ DN+ + F +KD I+ TLL+GP +GLYP+
Sbjct: 371 LRNILHVPRTKKNLISAHRLAVDNHAFVEVHPRFFAIKDQITKNTLLRGPCCNGLYPLPA 430
Query: 204 KFTSSAKALSAHTPDITTLHRRLGHPSFQTIQKLKHQLNITNL--SSQPFFCNECKTCRS 377
+SS + L A P ++ H RLGHPS+Q +QK+ N+ L S + C+ C+ +S
Sbjct: 431 STSSSKQVLGAIKPTVSIWHSRLGHPSWQIVQKVVSHNNLPCLGESKELGVCDACQKGKS 490
Query: 378 QKLPFQLSTNSTSTPLELLHMDL 446
+LPF ST++++ PLEL+ D+
Sbjct: 491 HQLPFLKSTSASNFPLELVFSDV 513
>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
Length = 1825
Score = 98.6 bits (244), Expect = 8e-19
Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 5/144 (3%)
Frame = +3
Query: 30 LNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHKHGLYPIKF 209
LNN+L VP A+ NL+S HK +DN+ + S F++KD + RT+L+G + GLYP+
Sbjct: 507 LNNVLHVPQANKNLISAHKLAADNSVFLEIHSKHFLIKDQATRRTVLKGRRQKGLYPVPS 566
Query: 210 T---SSAKALSAHTPDITTLHRRLGHPSFQTIQKL--KHQLNITNLSSQPFFCNECKTCR 374
SSAK + A TP H RLGH S I ++ K++L + S++ C+ C +
Sbjct: 567 ASPPSSAKVVCAVTPSFERWHSRLGHSSAPIISRVISKNKLPCLDESNKESVCDACLKAK 626
Query: 375 SQKLPFQLSTNSTSTPLELLHMDL 446
S +LP+ S + +S PLEL+ D+
Sbjct: 627 SHQLPYSKSLSISSHPLELVFSDV 650
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 97.8 bits (242), Expect = 1e-18
Identities = 58/161 (36%), Positives = 86/161 (53%), Gaps = 14/161 (8%)
Frame = +3
Query: 6 NANDQSFCLNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHK 185
+++ SF L + VP S NL+SV KF S+NN I F S F VKDL + L QG +
Sbjct: 393 HSHTHSFRLKKVFHVPFISANLISVAKFCSENNALIEFHSNAFFVKDLHTKMVLAQGKLE 452
Query: 186 HGLYPIKFTSSAKALSA-------HTPDITTL-------HRRLGHPSFQTIQKLKHQLNI 323
+GLY S+ K S+ H+ +T+ H RLGH SF + K+ + N+
Sbjct: 453 NGLYKFPVFSNLKPYSSINNASAFHSQFSSTVENKAELWHNRLGHASFDIVSKVMNTCNV 512
Query: 324 TNLSSQPFFCNECKTCRSQKLPFQLSTNSTSTPLELLHMDL 446
+ + F C++C+ +S +LP QLS S PLEL++ D+
Sbjct: 513 ASGKYKSFVCSDCQLAKSHRLPTQLSNFHASKPLELVYTDI 553
>emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]
Length = 590
Score = 95.9 bits (237), Expect = 5e-18
Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 4/148 (2%)
Frame = +3
Query: 15 DQSFCLNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHKHGL 194
++ F + + L VP + NL+SVH FT NN + F T F+VKD +G LLQGP ++G+
Sbjct: 348 NRKFQVEDTLCVPTINKNLISVHHFTKQNNVILEFHPTYFLVKDRRTGEILLQGPCENGV 407
Query: 195 YPIKFTSSAK--ALSAHTPDITTLHRRLGHPSFQTIQKL--KHQLNITNLSSQPFFCNEC 362
YP+ + +A A +T H+RLGHPSF+ + +L L T+ S C+ C
Sbjct: 408 YPMPSSPAATPIAFVHERTSVTGWHQRLGHPSFKVVTRLISSFSLPTTSCLSGSNNCHSC 467
Query: 363 KTCRSQKLPFQLSTNSTSTPLELLHMDL 446
++ +LPF +++TP +LL+ D+
Sbjct: 468 SINKAHQLPFHKHGLTSTTPFDLLYTDV 495
>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
Length = 1534
Score = 95.5 bits (236), Expect = 7e-18
Identities = 59/153 (38%), Positives = 83/153 (54%), Gaps = 6/153 (3%)
Frame = +3
Query: 6 NANDQSFCLNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHK 185
+ +S LNNIL VPN NL+SV+K + N + F F VKDL +G LLQG K
Sbjct: 472 STQSRSLALNNILYVPNLHKNLISVYKLCNANKVSVEFFPAHFQVKDLSTGARLLQGRTK 531
Query: 186 HGLY--PIKFTSSAKALSAHTPDIT--TLHRRLGHPSFQTIQKLKHQ--LNITNLSSQPF 347
LY P+ + ++ TP T + H RLGHPS ++ L Q L ++N S + F
Sbjct: 532 DELYEWPVPSNTPISLFASPTPKTTLPSWHSRLGHPSPPVLKSLVSQFSLPVSNSSQKHF 591
Query: 348 FCNECKTCRSQKLPFQLSTNSTSTPLELLHMDL 446
C+ C +S KLPF +T + TPLE ++ D+
Sbjct: 592 PCSHCLINKSHKLPFYSNTIISYTPLEYVYSDV 624
>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]
Length = 1087
Score = 95.1 bits (235), Expect = 9e-18
Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Frame = +3
Query: 15 DQSFCLNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHKHGL 194
+++ LNN+L +P A NL+S H+ DN+ + F VKD + TLLQG + GL
Sbjct: 361 NRNLALNNVLYIPKAKKNLVSAHRLAYDNHAFVEIHPKFFCVKDQTTKSTLLQGRSRGGL 420
Query: 195 YPIKFTSSA----KALSAHTPDITTLHRRLGHPSFQTIQKLKHQLNI-TNLSSQPFFCNE 359
YPI S+ +AL + + + H RLGHPSF + ++ + NI + S + C+
Sbjct: 421 YPIPLKSTTPQGRQALVSTSSAESRWHSRLGHPSFSVVSRVLRKHNIPVSESREERVCDA 480
Query: 360 CKTCRSQKLPFQLSTNSTSTPLELLHMDL 446
C+ +S +LP+ S + +S PLEL+ D+
Sbjct: 481 CQQAKSHQLPYSRSVSRSSAPLELVFSDV 509
>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2074
Score = 95.1 bits (235), Expect = 9e-18
Identities = 52/144 (36%), Positives = 81/144 (56%), Gaps = 5/144 (3%)
Frame = +3
Query: 30 LNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHKHGLYPIKF 209
L NIL VP A NL+S H+ DN+ + F +KD ++ LL+GP ++GLYP+
Sbjct: 1337 LKNILHVPKAEKNLISAHRLAVDNHAFVEVHPRFFAIKDQVTKNLLLRGPCRNGLYPLPT 1396
Query: 210 TS---SAKALSAHTPDITTLHRRLGHPSFQTIQKLKHQLNITNLS--SQPFFCNECKTCR 374
+S S + L A P ++ H RLGHPS +QK+ N+ L ++ CN C+ +
Sbjct: 1397 SSLATSKQVLGAIKPTMSRWHSRLGHPSLAIVQKVVSSNNLPCLGDVNESGVCNACQQAK 1456
Query: 375 SQKLPFQLSTNSTSTPLELLHMDL 446
S +LP+ S + ++ PLEL+ D+
Sbjct: 1457 SHQLPYPKSFSVSNNPLELVFSDV 1480
>emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]
Length = 1131
Score = 95.1 bits (235), Expect = 9e-18
Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Frame = +3
Query: 15 DQSFCLNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHKHGL 194
+++ LNN+L +P A NL+S H+ DN+ + F VKD + TLLQG + GL
Sbjct: 361 NRNLALNNVLYIPKAKKNLVSAHRLAYDNHAFVEIHPKFFCVKDQTTKSTLLQGRSRGGL 420
Query: 195 YPIKFTSSA----KALSAHTPDITTLHRRLGHPSFQTIQKLKHQLNI-TNLSSQPFFCNE 359
YPI S+ +AL + + + H RLGHPSF + ++ + NI + S + C+
Sbjct: 421 YPIPLKSTTPQGRQALVSTSSAESRWHSRLGHPSFSVVSRVLRKHNIPVSESREERVCDA 480
Query: 360 CKTCRSQKLPFQLSTNSTSTPLELLHMDL 446
C+ +S +LP+ S + +S PLEL+ D+
Sbjct: 481 CQQAKSHQLPYSRSVSRSSAPLELVFSDV 509
>gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108709048|gb|ABF96843.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 594
Score = 94.7 bits (234), Expect = 1e-17
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Frame = +3
Query: 24 FCLNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHKHGLYPI 203
F L ++L+ P+ NLLS+ +FT DN C I F GF +KD + R +L+ LY +
Sbjct: 404 FDLRHVLVAPSLVRNLLSIRQFTRDNKCSIEFDEFGFSIKDPQTRRVILRCNSHGELYTL 463
Query: 204 KFTSSAKALSAH---TPDITTLHRRLGHPSFQTIQKLKHQLNITNLSSQPFFCNECKTCR 374
++A +++AH T HRRLGHP + L+H I + C+ C+ +
Sbjct: 464 P--AAAPSIAAHYNLATSSTLWHRRLGHPGPTAVTTLQHLSAIPRSKTNNSLCHACQLGK 521
Query: 375 SQKLPFQLSTNSTSTPLELLHMDL 446
+LPF ST+STS+P EL+H D+
Sbjct: 522 HTRLPFNKSTSSTSSPFELVHCDV 545
>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
polyprotein from Arabidopsis arenosa [Arabidopsis
thaliana]
Length = 1194
Score = 94.7 bits (234), Expect = 1e-17
Identities = 55/149 (36%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Frame = +3
Query: 18 QSFCLNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHKHGLY 197
+S L ++L VPN NL+SV++ + N + F F VKDL +G LLQG K LY
Sbjct: 340 RSLALTDVLYVPNIHKNLISVYRMCNANKVSVEFFPAHFQVKDLKTGVQLLQGRTKDELY 399
Query: 198 --PIKFTSSAKALSAHTP--DITTLHRRLGHPSFQTIQKLKHQ--LNITNLSSQPFFCNE 359
P+ + + TP D+T+ H RLGHPS T++ + Q L ++N + F C++
Sbjct: 400 EWPVNPPKPSSHFTTTTPKTDLTSWHSRLGHPSLSTLKVVVSQFSLPVSNSLQKQFNCSD 459
Query: 360 CKTCRSQKLPFQLSTNSTSTPLELLHMDL 446
C ++ KLPF +T +++ PLE L++DL
Sbjct: 460 CLLNKTHKLPFHTNTITSTQPLEYLYIDL 488
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 94.7 bits (234), Expect = 1e-17
Identities = 55/158 (34%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Frame = +3
Query: 9 ANDQSFCLNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHKH 188
+N SF L + VP S NL+SV KF SDNN I F S GF +KDL + R L QG ++
Sbjct: 391 SNPHSFQLKKVFHVPFISANLISVAKFCSDNNALIEFHSNGFFLKDLHTKRVLAQGKLEN 450
Query: 189 GLYPIKFTSSAKALSAHTPDITTL------------HRRLGHPSFQTIQKLKHQLNITNL 332
GLY S+ K + +T H RLGH + + ++ H N++
Sbjct: 451 GLYKFPVISNKKTAYVGITNDSTFQCSNIENKRELWHHRLGHAATDIVTRIMHNCNVSCG 510
Query: 333 SSQPFFCNECKTCRSQKLPFQLSTNSTSTPLELLHMDL 446
+ C+ C+ +S +LP LS+ S PLEL++ D+
Sbjct: 511 KYKATVCSSCQLAKSHRLPTHLSSFHASKPLELVYTDI 548
>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
sativa Japonica Group]
gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
protein [Oryza sativa Japonica Group]
Length = 1219
Score = 94.7 bits (234), Expect = 1e-17
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Frame = +3
Query: 30 LNNILLVPNASHNLLSVHKFTSDNNCEITFSSTGFIVKDLISGRTLLQGPHKHGLYPIKF 209
L NIL VP AS NL+SVH+ +DN + F++KD ++ RT+L+GP + LYP+
Sbjct: 370 LKNILHVPKASKNLISVHRLVADNYAFLEIHQKYFLIKDKVTRRTILEGPCRRDLYPLPA 429
Query: 210 TSSAKALSAHTPDITTLHRRLGHPSFQTIQKL--KHQLNITNLSSQPFFCNECKTCRSQK 383
K + A P H RLGH S + ++ +++L +N S C+ C+ +S +
Sbjct: 430 GDPIKQVFAVMPSFERWHGRLGHASKPIVLRVINQNKLPCSNESPSESVCDACQQGKSHQ 489
Query: 384 LPFQLSTNSTSTPLELLHMDL 446
LPF + +S PLEL+H D+
Sbjct: 490 LPFPKFFSVSSNPLELIHSDV 510