BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00022379
         (1266 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006485879.1| PREDICTED: RNA pseudouridine synthase 5-like...   358   e-138
ref|XP_006485880.1| PREDICTED: RNA pseudouridine synthase 5-like...   358   e-137
ref|XP_007009784.1| Pseudouridine synthase family protein [Theob...   343   e-134
ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Popu...   347   e-133
ref|XP_004307403.1| PREDICTED: RNA pseudourine synthase 5-like [...   345   e-132
ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like...   343   e-130
ref|XP_004233537.1| PREDICTED: RNA pseudourine synthase 5-like [...   343   e-130
ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [...   354   e-130
emb|CBI31488.3| unnamed protein product [Vitis vinifera]              353   e-129
ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatul...   340   e-129
gb|EXB80105.1| RNA pseudourine synthase 5 [Morus notabilis]           337   e-128
ref|XP_007143685.1| hypothetical protein PHAVU_007G093000g [Phas...   330   e-128
ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like...   337   e-128
ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [...   335   e-128
ref|XP_004496322.1| PREDICTED: RNA pseudourine synthase 5-like [...   332   e-128
ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [...   335   e-128
ref|XP_006403820.1| hypothetical protein EUTSA_v10010446mg [Eutr...   341   e-124
ref|XP_006291291.1| hypothetical protein CARUB_v10017427mg [Caps...   336   e-123
ref|NP_974416.1| RNA pseudourine synthase 5 [Arabidopsis thalian...   337   e-121
emb|CAC07917.1| putative protein [Arabidopsis thaliana]               330   e-119

>ref|XP_006485879.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Citrus
           sinensis]
          Length = 390

 Score =  358 bits (920), Expect(2) = e-138
 Identities = 179/258 (69%), Positives = 205/258 (79%), Gaps = 4/258 (1%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNPD 182
           WP  N GL Y D V P+ S  TLI FYSTKH +SAP QGWLQRIQNGQIT+DG++  +P+
Sbjct: 17  WPQLNEGLLYNDVVSPSDSKLTLIEFYSTKHKNSAPLQGWLQRIQNGQITVDGRVVNDPN 76

Query: 183 TILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVLTQL 362
            IL  G ELVYHR+PWKEPD PYLL+V YED+ L+ALNKPSG+QVLPGGLFQQRTVL QL
Sbjct: 77  IILSAGSELVYHRLPWKEPDVPYLLEVFYEDDDLIALNKPSGLQVLPGGLFQQRTVLKQL 136

Query: 363 QWRGGKS----GDQEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVVHEKNT 530
           QWR  K       Q  HPVPVHRLGRGTSGILLCAK+KLAKT ++AYFAD T+VV   NT
Sbjct: 137 QWRASKQSSSLSSQASHPVPVHRLGRGTSGILLCAKTKLAKTCIAAYFADKTSVVDADNT 196

Query: 531 NTERSGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPALSKVKV 710
             E S RKI+K+YRAL  GI+D+D+V+I QPIG +RY GVAKGLY+AS SGKPALSKV V
Sbjct: 197 VMELSQRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLYVASPSGKPALSKVDV 256

Query: 711 LERDVQRNRSLVQVV*LQ 764
           LERDVQRN +LVQ V +Q
Sbjct: 257 LERDVQRNCTLVQQVEIQ 274



 Score =  162 bits (409), Expect(2) = e-138
 Identities = 73/109 (66%), Positives = 92/109 (84%)
 Frame = +2

Query: 755  LVTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDDSHAKDGGYQRPM 934
            LV  VEIQSGRPHQIRIHL+++GHPL GDPLY +GG P SFDSE  D + A+DGGY+RP+
Sbjct: 267  LVQQVEIQSGRPHQIRIHLAFLGHPLLGDPLYVAGGQPKSFDSEFADGTFAQDGGYERPV 326

Query: 935  RPLPGDCGYFLHAHQLVLHHPTTNEVIQITAPLPYMLQSQEEACKVKQT 1081
             P+PGDCGY+LHA+QL L HPTTNEVI+ITAPLP +L+++EE  +V ++
Sbjct: 327  NPVPGDCGYYLHAYQLFLSHPTTNEVIKITAPLPSVLKTREEGREVDKS 375


>ref|XP_006485880.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X2 [Citrus
           sinensis] gi|568865018|ref|XP_006485881.1| PREDICTED:
           RNA pseudouridine synthase 5-like isoform X3 [Citrus
           sinensis]
          Length = 389

 Score =  358 bits (919), Expect(2) = e-137
 Identities = 178/254 (70%), Positives = 203/254 (79%), Gaps = 4/254 (1%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNPD 182
           WP  N GL Y D V P+ S  TLI FYSTKH +SAP QGWLQRIQNGQIT+DG++  +P+
Sbjct: 17  WPQLNEGLLYNDVVSPSDSKLTLIEFYSTKHKNSAPLQGWLQRIQNGQITVDGRVVNDPN 76

Query: 183 TILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVLTQL 362
            IL  G ELVYHR+PWKEPD PYLL+V YED+ L+ALNKPSG+QVLPGGLFQQRTVL QL
Sbjct: 77  IILSAGSELVYHRLPWKEPDVPYLLEVFYEDDDLIALNKPSGLQVLPGGLFQQRTVLKQL 136

Query: 363 QWRGGKS----GDQEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVVHEKNT 530
           QWR  K       Q  HPVPVHRLGRGTSGILLCAK+KLAKT ++AYFAD T+VV   NT
Sbjct: 137 QWRASKQSSSLSSQASHPVPVHRLGRGTSGILLCAKTKLAKTCIAAYFADKTSVVDADNT 196

Query: 531 NTERSGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPALSKVKV 710
             E S RKI+K+YRAL  GI+D+D+V+I QPIG +RY GVAKGLY+AS SGKPALSKV V
Sbjct: 197 VMELSQRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLYVASPSGKPALSKVDV 256

Query: 711 LERDVQRNRSLVQV 752
           LERDVQRN +LVQV
Sbjct: 257 LERDVQRNCTLVQV 270



 Score =  159 bits (403), Expect(2) = e-137
 Identities = 71/108 (65%), Positives = 91/108 (84%)
 Frame = +2

Query: 758  VTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDDSHAKDGGYQRPMR 937
            +  VEIQSGRPHQIRIHL+++GHPL GDPLY +GG P SFDSE  D + A+DGGY+RP+ 
Sbjct: 267  LVQVEIQSGRPHQIRIHLAFLGHPLLGDPLYVAGGQPKSFDSEFADGTFAQDGGYERPVN 326

Query: 938  PLPGDCGYFLHAHQLVLHHPTTNEVIQITAPLPYMLQSQEEACKVKQT 1081
            P+PGDCGY+LHA+QL L HPTTNEVI+ITAPLP +L+++EE  +V ++
Sbjct: 327  PVPGDCGYYLHAYQLFLSHPTTNEVIKITAPLPSVLKTREEGREVDKS 374


>ref|XP_007009784.1| Pseudouridine synthase family protein [Theobroma cacao]
           gi|508726697|gb|EOY18594.1| Pseudouridine synthase
           family protein [Theobroma cacao]
          Length = 378

 Score =  343 bits (879), Expect(2) = e-134
 Identities = 169/256 (66%), Positives = 208/256 (81%), Gaps = 6/256 (2%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNPD 182
           WP+ N GL Y D +KP+ S  TLI FYS+K+ +SAP QGWLQRIQNGQI++DG++ ++P+
Sbjct: 16  WPELNDGLFYDDVIKPSDSELTLIEFYSSKYKNSAPSQGWLQRIQNGQISVDGRVVRDPN 75

Query: 183 TILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVLTQL 362
           TILR   ELVYHR+PWKEPDAP+ L+VLYED+ ++ALNKPSG+QVLPGGLFQQRTVLTQL
Sbjct: 76  TILRGSSELVYHRLPWKEPDAPHALEVLYEDDDMIALNKPSGLQVLPGGLFQQRTVLTQL 135

Query: 363 QWRGGKS----GDQEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVVHEKNT 530
            WR  K       QE HPVPVHRLGRGTSGILLCAK+K AKT L+AYFADGT+++   + 
Sbjct: 136 SWRMRKQTSSLASQESHPVPVHRLGRGTSGILLCAKTKAAKTCLAAYFADGTSLIGANSN 195

Query: 531 NTERSG--RKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPALSKV 704
              +    RKISK+YRAL TGI+ +D+VVI+QPIG ++Y GVAKGLY+AS SGKPALSKV
Sbjct: 196 RKMQPSCTRKISKIYRALVTGILGEDKVVINQPIGIVQYPGVAKGLYVASPSGKPALSKV 255

Query: 705 KVLERDVQRNRSLVQV 752
           +VLE+D Q+N +LVQV
Sbjct: 256 EVLEKDEQQNHTLVQV 271



 Score =  164 bits (414), Expect(2) = e-134
 Identities = 71/109 (65%), Positives = 94/109 (86%)
 Frame = +2

Query: 758  VTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDDSHAKDGGYQRPMR 937
            +  V+I+SGRPHQIRIHLS+IGHPL GDPLY +GG P  FDSE VD+++A+DGGYQRP+ 
Sbjct: 268  LVQVQIESGRPHQIRIHLSFIGHPLLGDPLYIAGGQPRCFDSEFVDENYAQDGGYQRPVN 327

Query: 938  PLPGDCGYFLHAHQLVLHHPTTNEVIQITAPLPYMLQSQEEACKVKQTQ 1084
            P+PGDCGY+LHAH+L+L HPTT+E+I ITAPLP +LQ+Q+E  + +++Q
Sbjct: 328  PVPGDCGYYLHAHRLLLSHPTTDEIINITAPLPPVLQTQDEVRRSRESQ 376


>ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Populus trichocarpa]
           gi|222851845|gb|EEE89392.1| hypothetical protein
           POPTR_0008s04160g [Populus trichocarpa]
          Length = 377

 Score =  347 bits (891), Expect(2) = e-133
 Identities = 175/257 (68%), Positives = 208/257 (80%), Gaps = 7/257 (2%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNT-SCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNP 179
           WPD N GL Y D V  ++ S  TLI FYS+K+ +SAP QGWLQRI NGQITIDG++ K P
Sbjct: 18  WPDLNEGLFYNDVVSTSSDSGLTLIHFYSSKYKNSAPLQGWLQRIHNGQITIDGEVVKEP 77

Query: 180 DTILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVLTQ 359
             ILR+G+ELVYHR+PW+EPDAPYLL VLYED+ +VALNKP G+QVLPGGLFQQRTVL Q
Sbjct: 78  KAILRDGMELVYHRLPWREPDAPYLLQVLYEDDDMVALNKPPGLQVLPGGLFQQRTVLMQ 137

Query: 360 LQWRGGKSGD----QEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVVHE-K 524
           LQWR  K       Q  HPVPVHRLGRGTSGILLCAK+K+AKT L+AYFADGT+++ +  
Sbjct: 138 LQWRASKGSSSLAIQGSHPVPVHRLGRGTSGILLCAKTKVAKTSLAAYFADGTSLIGDSS 197

Query: 525 NTNTERS-GRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPALSK 701
           N N E+S  RKISK+YRAL  GI+++D+++I QPIG MRY GVAKGLY+AS SGKPALSK
Sbjct: 198 NANMEQSKRRKISKIYRALVNGILNQDKIIIKQPIGTMRYPGVAKGLYVASPSGKPALSK 257

Query: 702 VKVLERDVQRNRSLVQV 752
           V+VLERD Q N++LVQV
Sbjct: 258 VEVLERDSQLNQTLVQV 274



 Score =  155 bits (392), Expect(2) = e-133
 Identities = 72/102 (70%), Positives = 86/102 (84%), Gaps = 1/102 (0%)
 Frame = +2

Query: 758  VTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDDSHAKDGGYQRPMR 937
            +  VEI+SGRPHQIRIHLS+IGHPL GDPLY  GG P+ FDSE  D+S A+DGGY+RP +
Sbjct: 271  LVQVEIESGRPHQIRIHLSFIGHPLLGDPLYDVGGQPMCFDSEHEDESFAEDGGYERPAK 330

Query: 938  PLPGDCGYFLHAHQLVLHHPTTNE-VIQITAPLPYMLQSQEE 1060
            P+PGDCGY+LHAHQLVL HPT NE VI+ITAPLP +L++Q E
Sbjct: 331  PVPGDCGYYLHAHQLVLSHPTKNEQVIKITAPLPSILRTQAE 372


>ref|XP_004307403.1| PREDICTED: RNA pseudourine synthase 5-like [Fragaria vesca subsp.
           vesca]
          Length = 375

 Score =  345 bits (886), Expect(2) = e-132
 Identities = 171/256 (66%), Positives = 211/256 (82%), Gaps = 6/256 (2%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNPD 182
           WPD N GL+Y D VK + S  TLI FYS+K+ SSAP QGWLQRI+NGQIT+DG++ ++ D
Sbjct: 17  WPDLNDGLSYNDVVKSSDSELTLIEFYSSKYKSSAPLQGWLQRIRNGQITVDGEVVRDSD 76

Query: 183 TILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVLTQL 362
           TILR G ELVYHR+PW EPDAPYLL+VLYED+ ++ALNKP G+QVLPGGLFQQRTVLTQL
Sbjct: 77  TILRVGSELVYHRLPWGEPDAPYLLEVLYEDDDMIALNKPGGLQVLPGGLFQQRTVLTQL 136

Query: 363 QWRGGKSGD----QEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTA-VVHEKN 527
            WR  +  D    Q+ H VPVHRLGRGTSGILLCAK+K AKT+L+AYFADGT+ +  +  
Sbjct: 137 LWRESQKFDHLACQKSHLVPVHRLGRGTSGILLCAKTKHAKTQLAAYFADGTSHIGDDST 196

Query: 528 TNTE-RSGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPALSKV 704
           TNT+  + RKI+K+YRAL TGII +DEV++ QPIG +RY GVAKGLY+AS +GKPALSKV
Sbjct: 197 TNTKLHTTRKITKIYRALVTGIICEDEVIVKQPIGTVRYPGVAKGLYIASPAGKPALSKV 256

Query: 705 KVLERDVQRNRSLVQV 752
           +VL+RD+Q+N ++VQV
Sbjct: 257 EVLDRDIQKNHTIVQV 272



 Score =  154 bits (388), Expect(2) = e-132
 Identities = 69/107 (64%), Positives = 89/107 (83%)
 Frame = +2

Query: 758  VTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDDSHAKDGGYQRPMR 937
            +  VEIQSGRPHQIRIHLS+IGHPL GDPLY +GG P    S+ VD+S A DGG++RP +
Sbjct: 269  IVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPKCLGSDLVDESFADDGGFKRPTK 328

Query: 938  PLPGDCGYFLHAHQLVLHHPTTNEVIQITAPLPYMLQSQEEACKVKQ 1078
            P+PGDCGY LHAHQ+VL HP++NEVI+ITAPLP +L+++EE  +++Q
Sbjct: 329  PVPGDCGYNLHAHQVVLSHPSSNEVIKITAPLPLVLRTREEIEELRQ 375


>ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X3 [Solanum
           tuberosum]
          Length = 374

 Score =  343 bits (881), Expect(2) = e-130
 Identities = 170/256 (66%), Positives = 207/256 (80%), Gaps = 6/256 (2%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNPD 182
           WP+ N GLTY D V+P  +   LI FY  K+ +SAP QGWLQRIQN QITIDG++   PD
Sbjct: 18  WPELNEGLTYHDIVRPTDAGLMLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVVILPD 77

Query: 183 TILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVLTQL 362
           T LR G ELVYHR+PW+EPDAPYLL+VL++D++L+ +NKPSG+QVLPGGL+QQRTVLTQL
Sbjct: 78  TELRAGAELVYHRLPWREPDAPYLLEVLFQDDYLIVVNKPSGLQVLPGGLYQQRTVLTQL 137

Query: 363 QWRGGK-----SGDQEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVVHEKN 527
           QW   K     SG Q+ HPVPVHRLGRGTSGILLCAK+KL K+RL+AYFA+GT+VV +K 
Sbjct: 138 QWHACKPTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVVEDKC 197

Query: 528 TNTE-RSGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPALSKV 704
           TN+E  + RKI K+YRAL +G++D DEVVI QPIG ++Y GVAKGLY+AS SGKPALS V
Sbjct: 198 TNSECNTMRKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVASPSGKPALSSV 257

Query: 705 KVLERDVQRNRSLVQV 752
           +VLERD + N +LVQV
Sbjct: 258 RVLERDSENNCTLVQV 273



 Score =  150 bits (380), Expect(2) = e-130
 Identities = 70/101 (69%), Positives = 82/101 (81%)
 Frame = +2

Query: 758  VTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDDSHAKDGGYQRPMR 937
            +  VEIQSGRPHQIRIHLS+IG+PL GDPLY SGG P  F  E +D+S  KDGGYQRP  
Sbjct: 270  LVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPELMDESFEKDGGYQRPEN 329

Query: 938  PLPGDCGYFLHAHQLVLHHPTTNEVIQITAPLPYMLQSQEE 1060
            P+PGDCGY LHAHQ+ L HP TNE+I+ITAPLP +LQ++EE
Sbjct: 330  PVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTREE 370


>ref|XP_004233537.1| PREDICTED: RNA pseudourine synthase 5-like [Solanum lycopersicum]
          Length = 402

 Score =  343 bits (879), Expect(2) = e-130
 Identities = 171/256 (66%), Positives = 206/256 (80%), Gaps = 6/256 (2%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNPD 182
           WP  N GL+Y D V+P  +  TLI FY  K+ +SAP QGWLQRIQN QITIDG++   PD
Sbjct: 41  WPQRNEGLSYHDIVRPTDAGLTLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVVILPD 100

Query: 183 TILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVLTQL 362
           T LR G ELVYHR+PW+EPDAPYLL+VL+ED++L+ +NKPSG+QVLPGGL+QQRTVLTQL
Sbjct: 101 TELRAGAELVYHRLPWREPDAPYLLEVLFEDDYLIVVNKPSGLQVLPGGLYQQRTVLTQL 160

Query: 363 QWRGGK-----SGDQEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVVHEKN 527
           QW   K     SG Q+ HPVPVHRLGRGTSGILLCAK+KL K+RL+AYFA+GT+VV EK 
Sbjct: 161 QWHACKLTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVVEEKC 220

Query: 528 TNTE-RSGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPALSKV 704
           TN+E  + RKI K+YRAL +G++D DE VI QPIG ++Y GVAKGLY+AS SGKPALS V
Sbjct: 221 TNSECNTMRKICKIYRALVSGVMDMDEAVIKQPIGTIKYPGVAKGLYVASPSGKPALSSV 280

Query: 705 KVLERDVQRNRSLVQV 752
           +VLERD + N +LVQV
Sbjct: 281 RVLERDSESNCTLVQV 296



 Score =  149 bits (377), Expect(2) = e-130
 Identities = 69/101 (68%), Positives = 82/101 (81%)
 Frame = +2

Query: 758  VTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDDSHAKDGGYQRPMR 937
            +  VEIQSGRPHQIRIHLS+IG+PL GDPLY SGG P  F  E +D+S  KDGGYQRP  
Sbjct: 293  LVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPELLDESFEKDGGYQRPEN 352

Query: 938  PLPGDCGYFLHAHQLVLHHPTTNEVIQITAPLPYMLQSQEE 1060
            P+PGDCGY LHAHQ+ L HP TNE+I+ITAPLP +LQ+++E
Sbjct: 353  PVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTRDE 393


>ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [Vitis vinifera]
          Length = 348

 Score =  354 bits (908), Expect(2) = e-130
 Identities = 175/257 (68%), Positives = 205/257 (79%), Gaps = 7/257 (2%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNPD 182
           WPDFN GLTY D V  + S  TLI +YS+KH +SAP QGWLQRI  GQIT+DG +   P 
Sbjct: 9   WPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGTVVTEPK 68

Query: 183 TILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVLTQL 362
           TILR G +LVYHR+PW+EPDAPYLL++LYED+ ++ALNKPSG+QVLPGGLFQQRTVLTQL
Sbjct: 69  TILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRTVLTQL 128

Query: 363 QWRGGKSGD----QEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVVHEKNT 530
           QWR  K       QE H VPVHRLGRGTSGILLCAK+KLAKTRL+AYFADGT+VV     
Sbjct: 129 QWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSVVGGNRL 188

Query: 531 NTE---RSGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPALSK 701
           + +   R+ RKISK+YRAL  GI+DKDE+VI QPIG ++Y GVAKGLY+AS SGKPALSK
Sbjct: 189 DADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGKPALSK 248

Query: 702 VKVLERDVQRNRSLVQV 752
           V +LERDVQ +  +VQV
Sbjct: 249 VSILERDVQGDHMIVQV 265



 Score =  138 bits (348), Expect(2) = e-130
 Identities = 61/85 (71%), Positives = 71/85 (83%)
 Frame = +2

Query: 755  LVTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDDSHAKDGGYQRPM 934
            ++  VEIQSGRPHQIRIHLS+IGHPL GDPLY  GG P   D+E  ++S+A DGGYQRP+
Sbjct: 261  MIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCDAEFTNESYALDGGYQRPV 320

Query: 935  RPLPGDCGYFLHAHQLVLHHPTTNE 1009
            +P+PGDCGY LHAHQLVL HPTTNE
Sbjct: 321  KPVPGDCGYHLHAHQLVLSHPTTNE 345


>emb|CBI31488.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  353 bits (905), Expect(2) = e-129
 Identities = 175/256 (68%), Positives = 204/256 (79%), Gaps = 6/256 (2%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNPD 182
           WPDFN GLTY D V  + S  TLI +YS+KH +SAP QGWLQRI  GQIT+DG +   P 
Sbjct: 9   WPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGTVVTEPK 68

Query: 183 TILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVLTQL 362
           TILR G +LVYHR+PW+EPDAPYLL++LYED+ ++ALNKPSG+QVLPGGLFQQRTVLTQL
Sbjct: 69  TILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRTVLTQL 128

Query: 363 QWRGGKSGD----QEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVV--HEK 524
           QWR  K       QE H VPVHRLGRGTSGILLCAK+KLAKTRL+AYFADGT+VV  +  
Sbjct: 129 QWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSVVGGNRD 188

Query: 525 NTNTERSGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPALSKV 704
                R+ RKISK+YRAL  GI+DKDE+VI QPIG ++Y GVAKGLY+AS SGKPALSKV
Sbjct: 189 ADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGKPALSKV 248

Query: 705 KVLERDVQRNRSLVQV 752
            +LERDVQ +  +VQV
Sbjct: 249 SILERDVQGDHMIVQV 264



 Score =  138 bits (348), Expect(2) = e-129
 Identities = 61/85 (71%), Positives = 71/85 (83%)
 Frame = +2

Query: 755  LVTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDDSHAKDGGYQRPM 934
            ++  VEIQSGRPHQIRIHLS+IGHPL GDPLY  GG P   D+E  ++S+A DGGYQRP+
Sbjct: 260  MIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCDAEFTNESYALDGGYQRPV 319

Query: 935  RPLPGDCGYFLHAHQLVLHHPTTNE 1009
            +P+PGDCGY LHAHQLVL HPTTNE
Sbjct: 320  KPVPGDCGYHLHAHQLVLSHPTTNE 344


>ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatula]
           gi|358349060|ref|XP_003638558.1| RNA pseudourine
           synthase [Medicago truncatula]
           gi|355481000|gb|AES62203.1| RNA pseudourine synthase
           [Medicago truncatula] gi|355504493|gb|AES85696.1| RNA
           pseudourine synthase [Medicago truncatula]
          Length = 371

 Score =  340 bits (871), Expect(2) = e-129
 Identities = 166/258 (64%), Positives = 208/258 (80%), Gaps = 4/258 (1%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNPD 182
           WP+FN GL+Y D V+P+ +  TLI FYSTK+ SSAP QGWLQRI++ QIT+D ++  +P+
Sbjct: 11  WPEFNDGLSYDDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITLDARVVTDPN 70

Query: 183 TILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVLTQL 362
           TILR G +LVYHRIPWKEPDAP+ ++VLYED+ ++ALNKPSG+QVLPGGLFQQRTVLTQL
Sbjct: 71  TILRVGSKLVYHRIPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQRTVLTQL 130

Query: 363 QWRGGK----SGDQEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVVHEKNT 530
           QW           Q+PHPVPVHRLGRGTSGILLCAK+KLA+ RL++YFADGT+ +  K  
Sbjct: 131 QWETNNKSTIEAHQKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSRIEGKGH 190

Query: 531 NTERSGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPALSKVKV 710
             +  G KI+K+YRAL +GII+ D+V I+QPIG ++Y GVAKGLY+AS SGKPALS V V
Sbjct: 191 TNQELG-KIAKIYRALVSGIINNDQVTINQPIGMVKYPGVAKGLYVASQSGKPALSVVHV 249

Query: 711 LERDVQRNRSLVQVV*LQ 764
           LER+V+ N +LVQVV +Q
Sbjct: 250 LERNVKENSTLVQVVKIQ 267



 Score =  150 bits (380), Expect(2) = e-129
 Identities = 69/103 (66%), Positives = 83/103 (80%)
 Frame = +2

Query: 755  LVTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDDSHAKDGGYQRPM 934
            LV  V+IQSGRPHQIRIHLS+IGHPL GDPLYA GG P   D + +D+S A+DGGY RP 
Sbjct: 260  LVQVVKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDCDFLDESFAEDGGYTRPS 319

Query: 935  RPLPGDCGYFLHAHQLVLHHPTTNEVIQITAPLPYMLQSQEEA 1063
            +P+PGDCGY LHAH+L L HP TNE+I++ APLP +LQ+ EEA
Sbjct: 320  KPVPGDCGYHLHAHRLFLSHPITNEIIEMIAPLPSILQTHEEA 362


>gb|EXB80105.1| RNA pseudourine synthase 5 [Morus notabilis]
          Length = 377

 Score =  337 bits (865), Expect(2) = e-128
 Identities = 165/256 (64%), Positives = 207/256 (80%), Gaps = 6/256 (2%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNPD 182
           WP+ N GL Y+D V+ + S  TLI FYS K+ +SAP QGWLQRI+NGQIT++G++ ++PD
Sbjct: 18  WPELNDGLFYSDVVRTSDSESTLIQFYSRKYKNSAPLQGWLQRIRNGQITVNGRVVRDPD 77

Query: 183 TILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVLTQL 362
           TIL  G ELVYHR+PWKEP APY+L++LYED  ++AL+KPS +QVLPGGLFQQRTVLTQL
Sbjct: 78  TILSIGSELVYHRLPWKEPGAPYILEILYEDGDMIALDKPSELQVLPGGLFQQRTVLTQL 137

Query: 363 QWRGGKSGDQ----EPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVV--HEK 524
           QWR  K        EP+PVPVHRLGRGTSGILLCAK+K AKT+L+AYFADGT+ V  + K
Sbjct: 138 QWRATKQSSSLVCCEPNPVPVHRLGRGTSGILLCAKTKFAKTQLAAYFADGTSYVGGNSK 197

Query: 525 NTNTERSGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPALSKV 704
           N     + RKI K+YRAL TGI+ +D+V++ QPIG ++Y GVAKGLY+AS SGKPALSKV
Sbjct: 198 NNLELNARRKILKIYRALVTGIVCEDKVIVEQPIGTVQYPGVAKGLYVASPSGKPALSKV 257

Query: 705 KVLERDVQRNRSLVQV 752
           +VLERDV++N +LV+V
Sbjct: 258 EVLERDVEKNCTLVKV 273



 Score =  151 bits (381), Expect(2) = e-128
 Identities = 70/102 (68%), Positives = 82/102 (80%)
 Frame = +2

Query: 758  VTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDDSHAKDGGYQRPMR 937
            +  VEIQSGRPHQIRIHLS+IGHPL GDPLY  GG P  FD E VD S A+DGG+ RP +
Sbjct: 270  LVKVEIQSGRPHQIRIHLSFIGHPLLGDPLYVVGGRPRCFDPEFVDGSFAQDGGFPRPAK 329

Query: 938  PLPGDCGYFLHAHQLVLHHPTTNEVIQITAPLPYMLQSQEEA 1063
            P+PGDCGY LHAH + L HPTTNEVI+ITAPLP +L +++EA
Sbjct: 330  PVPGDCGYTLHAHHVSLSHPTTNEVIEITAPLPPVLWTRQEA 371


>ref|XP_007143685.1| hypothetical protein PHAVU_007G093000g [Phaseolus vulgaris]
           gi|561016875|gb|ESW15679.1| hypothetical protein
           PHAVU_007G093000g [Phaseolus vulgaris]
          Length = 365

 Score =  330 bits (847), Expect(2) = e-128
 Identities = 160/250 (64%), Positives = 201/250 (80%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNPD 182
           WP+ N GL+Y D V+ + S  TLI FY TK+ SSAP QGWLQRI++GQIT DG++  +  
Sbjct: 11  WPECNDGLSYDDVVRSSDSGLTLIEFYFTKYKSSAPLQGWLQRIKSGQITFDGRVVTDSS 70

Query: 183 TILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVLTQL 362
           T+LR G +LVYHR+PWKEPDAP++++VLYED+ ++ALNKPSG+QVLPGGLFQQRTVLTQL
Sbjct: 71  TVLRVGSKLVYHRLPWKEPDAPHMIEVLYEDDEMIALNKPSGLQVLPGGLFQQRTVLTQL 130

Query: 363 QWRGGKSGDQEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVVHEKNTNTER 542
           QW       ++PHPVPVHRLGRGTSGILLCAK+KLA+ RL++YFADGT+ +  K      
Sbjct: 131 QWEANL--HKKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSHIGGKRDTNGE 188

Query: 543 SGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPALSKVKVLERD 722
            G KI+K+YR LA+GI++ DEV I+QPIG ++Y GVAKGLY+AS SGKPALS V +LER+
Sbjct: 189 IG-KIAKIYRGLASGIVENDEVTINQPIGVVKYPGVAKGLYVASQSGKPALSVVGILERN 247

Query: 723 VQRNRSLVQV 752
           VQ N +LVQV
Sbjct: 248 VQENSTLVQV 257



 Score =  158 bits (399), Expect(2) = e-128
 Identities = 71/105 (67%), Positives = 87/105 (82%)
 Frame = +2

Query: 758  VTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDDSHAKDGGYQRPMR 937
            +  V+IQSGRPHQIRIHLS+IGHPL GDPLY  GG P   D +S+D+S A+DGGYQRP +
Sbjct: 254  LVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYGDGGQPKCLDCDSIDESFAEDGGYQRPTK 313

Query: 938  PLPGDCGYFLHAHQLVLHHPTTNEVIQITAPLPYMLQSQEEACKV 1072
            P+PGDCGY LHAH+LVL HP TNE+I+ITAPLP +LQ+ EEA ++
Sbjct: 314  PVPGDCGYNLHAHKLVLSHPLTNELIEITAPLPSVLQTPEEAKEI 358


>ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Solanum
           tuberosum] gi|565360441|ref|XP_006346976.1| PREDICTED:
           RNA pseudouridine synthase 5-like isoform X2 [Solanum
           tuberosum]
          Length = 379

 Score =  337 bits (865), Expect(2) = e-128
 Identities = 170/261 (65%), Positives = 207/261 (79%), Gaps = 11/261 (4%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNPD 182
           WP+ N GLTY D V+P  +   LI FY  K+ +SAP QGWLQRIQN QITIDG++   PD
Sbjct: 18  WPELNEGLTYHDIVRPTDAGLMLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVVILPD 77

Query: 183 TIL-----REGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRT 347
           T L     R G ELVYHR+PW+EPDAPYLL+VL++D++L+ +NKPSG+QVLPGGL+QQRT
Sbjct: 78  TELSFWMCRAGAELVYHRLPWREPDAPYLLEVLFQDDYLIVVNKPSGLQVLPGGLYQQRT 137

Query: 348 VLTQLQWRGGK-----SGDQEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAV 512
           VLTQLQW   K     SG Q+ HPVPVHRLGRGTSGILLCAK+KL K+RL+AYFA+GT+V
Sbjct: 138 VLTQLQWHACKPTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSV 197

Query: 513 VHEKNTNTE-RSGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKP 689
           V +K TN+E  + RKI K+YRAL +G++D DEVVI QPIG ++Y GVAKGLY+AS SGKP
Sbjct: 198 VEDKCTNSECNTMRKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVASPSGKP 257

Query: 690 ALSKVKVLERDVQRNRSLVQV 752
           ALS V+VLERD + N +LVQV
Sbjct: 258 ALSSVRVLERDSENNCTLVQV 278



 Score =  150 bits (380), Expect(2) = e-128
 Identities = 70/101 (69%), Positives = 82/101 (81%)
 Frame = +2

Query: 758  VTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDDSHAKDGGYQRPMR 937
            +  VEIQSGRPHQIRIHLS+IG+PL GDPLY SGG P  F  E +D+S  KDGGYQRP  
Sbjct: 275  LVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPELMDESFEKDGGYQRPEN 334

Query: 938  PLPGDCGYFLHAHQLVLHHPTTNEVIQITAPLPYMLQSQEE 1060
            P+PGDCGY LHAHQ+ L HP TNE+I+ITAPLP +LQ++EE
Sbjct: 335  PVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTREE 375


>ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  335 bits (859), Expect(2) = e-128
 Identities = 168/255 (65%), Positives = 199/255 (78%), Gaps = 5/255 (1%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNPD 182
           WPD N GL Y D VKP  S  +LI FYS K+ SSAP +GWLQRI+N QITIDG++  +P+
Sbjct: 14  WPDLNDGLFYNDVVKPPDSGKSLIHFYSWKYKSSAPLEGWLQRIKNEQITIDGEVITDPE 73

Query: 183 TILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVLTQL 362
           TILR G +LVY R+PWKEPD PYLL++LYEDN ++ALNKPSG+QVLPGG+FQQRTVLTQL
Sbjct: 74  TILRIGSDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPSGLQVLPGGVFQQRTVLTQL 133

Query: 363 QWRGGK---SGDQEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVVHEKNTN 533
           QW   K   S  +E HPVPVHRLGRGTSGILLCAK+KLA+T+ +AYFA+GT+ V     +
Sbjct: 134 QWWSSKQSFSVSEELHPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSVRRNRNS 193

Query: 534 TERSG--RKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPALSKVK 707
           T   G  RKISK+YRAL TGII  DEV + QPIG M+Y GVA+GLY+A+ SGKPA SKV 
Sbjct: 194 TMEEGTKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPACSKVN 253

Query: 708 VLERDVQRNRSLVQV 752
           VLERD Q   +LVQV
Sbjct: 254 VLERDEQSKHTLVQV 268



 Score =  151 bits (381), Expect(2) = e-128
 Identities = 68/102 (66%), Positives = 84/102 (82%)
 Frame = +2

Query: 758  VTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDDSHAKDGGYQRPMR 937
            +  VEIQSGRPHQIRIHLS IGHPL GDPLY +GG P    SE V+ S A+DGGY+RP +
Sbjct: 265  LVQVEIQSGRPHQIRIHLSSIGHPLVGDPLYVAGGQPNCLHSEVVNQSFAEDGGYERPTK 324

Query: 938  PLPGDCGYFLHAHQLVLHHPTTNEVIQITAPLPYMLQSQEEA 1063
            P+PGDCGY+LHAHQL+L+HP TNEV++I APLP +L+++ EA
Sbjct: 325  PVPGDCGYYLHAHQLILYHPKTNEVVKIIAPLPPILRTRIEA 366


>ref|XP_004496322.1| PREDICTED: RNA pseudourine synthase 5-like [Cicer arietinum]
          Length = 368

 Score =  332 bits (850), Expect(2) = e-128
 Identities = 160/254 (62%), Positives = 201/254 (79%), Gaps = 4/254 (1%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNPD 182
           WP+ N GL+Y D V+P+ +  TLI FYSTK+ SSAP QGWLQRI++ QIT+D ++  +P+
Sbjct: 11  WPELNDGLSYNDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITVDAKVVTDPN 70

Query: 183 TILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVLTQL 362
           T+LR G +LVYHR+PWKEPDAP+ + VLYED+ ++ALNKPSG+QVLPGGLFQQRTVLTQL
Sbjct: 71  TLLRAGSKLVYHRLPWKEPDAPHTIQVLYEDDDIIALNKPSGLQVLPGGLFQQRTVLTQL 130

Query: 363 QWRGGK----SGDQEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVVHEKNT 530
           QW           Q+PHPVPVHRLGRGTSGILLCAK+KLA+  L++YFADGT+ +  K  
Sbjct: 131 QWETNNKCTFEAHQKPHPVPVHRLGRGTSGILLCAKTKLARVHLASYFADGTSRIGGKRD 190

Query: 531 NTERSGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPALSKVKV 710
             +  G KI+K+YRAL +GIID D+V I QPIG ++Y GVAKGLY+AS SGKPALS V +
Sbjct: 191 TNQELG-KIAKIYRALVSGIIDNDKVTIDQPIGMVKYPGVAKGLYVASQSGKPALSVVDI 249

Query: 711 LERDVQRNRSLVQV 752
           LER+V+ N +LVQV
Sbjct: 250 LERNVKENSTLVQV 263



 Score =  154 bits (390), Expect(2) = e-128
 Identities = 70/109 (64%), Positives = 87/109 (79%)
 Frame = +2

Query: 758  VTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDDSHAKDGGYQRPMR 937
            +  V+IQSGRPHQIRIHLS+IGHPL GDPLYA GG P   D + +DDS A+DGGY RP +
Sbjct: 260  LVQVKIQSGRPHQIRIHLSFIGHPLIGDPLYAVGGQPKCLDYDFLDDSFAEDGGYPRPPK 319

Query: 938  PLPGDCGYFLHAHQLVLHHPTTNEVIQITAPLPYMLQSQEEACKVKQTQ 1084
            P+PGDCGY+LHAH+L+L HP TNE+I+I APLP +LQ+ EEA ++   Q
Sbjct: 320  PVPGDCGYYLHAHELLLTHPITNEIIEIIAPLPSILQTHEEAKEIAIAQ 368


>ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  335 bits (859), Expect(2) = e-128
 Identities = 168/255 (65%), Positives = 199/255 (78%), Gaps = 5/255 (1%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNPD 182
           WPD N GL Y D VKP  S  +LI FYS K+ SSAP +GWLQRI+N QITIDG++  +P+
Sbjct: 14  WPDLNDGLFYNDVVKPPDSGKSLIHFYSWKYKSSAPLEGWLQRIKNEQITIDGEVITDPE 73

Query: 183 TILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVLTQL 362
           TILR G +LVY R+PWKEPD PYLL++LYEDN ++ALNKPSG+QVLPGG+FQQRTVLTQL
Sbjct: 74  TILRIGSDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPSGLQVLPGGVFQQRTVLTQL 133

Query: 363 QWRGGK---SGDQEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVVHEKNTN 533
           QW   K   S  +E HPVPVHRLGRGTSGILLCAK+KLA+T+ +AYFA+GT+ V     +
Sbjct: 134 QWWSSKQSFSVSEELHPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSVRRNRNS 193

Query: 534 TERSG--RKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPALSKVK 707
           T   G  RKISK+YRAL TGII  DEV + QPIG M+Y GVA+GLY+A+ SGKPA SKV 
Sbjct: 194 TMEEGTKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPACSKVN 253

Query: 708 VLERDVQRNRSLVQV 752
           VLERD Q   +LVQV
Sbjct: 254 VLERDEQSKHTLVQV 268



 Score =  150 bits (380), Expect(2) = e-128
 Identities = 68/102 (66%), Positives = 84/102 (82%)
 Frame = +2

Query: 758  VTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDDSHAKDGGYQRPMR 937
            +  VEIQSGRPHQIRIHLS IGHPL GDPLY +GG P    SE V+ S A+DGGY+RP +
Sbjct: 265  LVQVEIQSGRPHQIRIHLSSIGHPLLGDPLYVAGGQPNCLHSEVVNQSFAEDGGYERPTK 324

Query: 938  PLPGDCGYFLHAHQLVLHHPTTNEVIQITAPLPYMLQSQEEA 1063
            P+PGDCGY+LHAHQL+L+HP TNEV++I APLP +L+++ EA
Sbjct: 325  PVPGDCGYYLHAHQLILYHPKTNEVVKIIAPLPPILRTRIEA 366


>ref|XP_006403820.1| hypothetical protein EUTSA_v10010446mg [Eutrema salsugineum]
           gi|557104939|gb|ESQ45273.1| hypothetical protein
           EUTSA_v10010446mg [Eutrema salsugineum]
          Length = 382

 Score =  341 bits (875), Expect(2) = e-124
 Identities = 171/258 (66%), Positives = 209/258 (81%), Gaps = 8/258 (3%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCC---TLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQIEK 173
           WP+ N GL Y D V   +S     T+  FYSTK+ SSAP  GW+QRIQNGQI IDG++ K
Sbjct: 15  WPELNDGLAYKDVVSSFSSSSELTTVSDFYSTKYKSSAPLLGWIQRIQNGQIQIDGEVVK 74

Query: 174 NPDTILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVL 353
           + +T+LR G +LVYHR+PWKEPD PY L+VLYEDN L+ALNKPSG+QVLPGGLFQQRT+L
Sbjct: 75  DHNTLLRRGSKLVYHRLPWKEPDTPYSLEVLYEDNDLIALNKPSGLQVLPGGLFQQRTLL 134

Query: 354 TQLQW----RGGKSGDQEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVVHE 521
           TQLQW    +   +G +E HPVPVHRLGRGTSGILLCAK+KLAKT+L++YFA+GT++V  
Sbjct: 135 TQLQWCFSKKDSSTGARESHPVPVHRLGRGTSGILLCAKTKLAKTKLASYFAEGTSLVGF 194

Query: 522 KNTNTE-RSGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPALS 698
            N + E  +GRKISK+YRALA GI+++DEVVI QPIG +RY GVAKGLY+ASS GKPALS
Sbjct: 195 GNLDQECGTGRKISKIYRALADGIVEEDEVVIKQPIGVVRYPGVAKGLYVASSEGKPALS 254

Query: 699 KVKVLERDVQRNRSLVQV 752
           KV VLER++QRN +LV+V
Sbjct: 255 KVAVLERNMQRNCTLVKV 272



 Score =  133 bits (335), Expect(2) = e-124
 Identities = 61/103 (59%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
 Frame = +2

Query: 758  VTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDDSHAKDGGYQRPMR 937
            +  VEIQSGRPHQIRIHL+Y+GHPL GDPLY +GG P  FD ++VD + A+DGGY+RP +
Sbjct: 269  LVKVEIQSGRPHQIRIHLAYMGHPLVGDPLYVAGGKPKCFDPDAVDSAFAEDGGYRRPNQ 328

Query: 938  PLPGDCGYFLHAHQLVLHH-PTTNEVIQITAPLPYMLQSQEEA 1063
             +PGDCGY LHAHQ+ L +    N+V+++ APLP +LQ+  EA
Sbjct: 329  AVPGDCGYHLHAHQVELPNLLNLNKVVKVVAPLPPILQTSSEA 371


>ref|XP_006291291.1| hypothetical protein CARUB_v10017427mg [Capsella rubella]
           gi|482559998|gb|EOA24189.1| hypothetical protein
           CARUB_v10017427mg [Capsella rubella]
          Length = 382

 Score =  336 bits (862), Expect(2) = e-123
 Identities = 167/256 (65%), Positives = 206/256 (80%), Gaps = 6/256 (2%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCCTLIS-FYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNP 179
           WP+ N GL Y D V  + S  T +S FY TK+ SSAP  GW+QRIQNGQI IDG++ K+P
Sbjct: 15  WPEHNDGLEYKDVVSSSESELTTVSDFYFTKYKSSAPLLGWIQRIQNGQIQIDGEVVKDP 74

Query: 180 DTILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVLTQ 359
            T+LR G +LVYHR+PWKEPD PY L++LYED+ L+ALNKPSG+QVLPGGLFQQRT+LTQ
Sbjct: 75  KTVLRSGSKLVYHRLPWKEPDTPYSLEILYEDDDLIALNKPSGLQVLPGGLFQQRTLLTQ 134

Query: 360 LQWRGGK----SGDQEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVVHEKN 527
           LQW  GK    +G  E HPVPVHRLGRGTSGILLCAK+KLAKT+L+AYFA+GT++V   N
Sbjct: 135 LQWWFGKKDFSTGSPESHPVPVHRLGRGTSGILLCAKTKLAKTKLAAYFAEGTSLVGSGN 194

Query: 528 TNTE-RSGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPALSKV 704
            + +  +GRK+SK+YRALA GI+++DEVVI QPIG +RY GVAKGLY+AS  GKPA SKV
Sbjct: 195 LDQDCGTGRKLSKIYRALADGIVEEDEVVIQQPIGVVRYPGVAKGLYVASPEGKPAFSKV 254

Query: 705 KVLERDVQRNRSLVQV 752
            VLERD +++ +LV+V
Sbjct: 255 VVLERDREKSCTLVKV 270



 Score =  134 bits (338), Expect(2) = e-123
 Identities = 64/105 (60%), Positives = 84/105 (80%), Gaps = 3/105 (2%)
 Frame = +2

Query: 758  VTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESV--DDSHAKDGGYQRP 931
            +  VEIQSGRPHQIRIHL+YIGHPL GDPLY +GG P  FD++ V  D + A+DGGY+RP
Sbjct: 267  LVKVEIQSGRPHQIRIHLAYIGHPLIGDPLYVAGGQPKCFDTDLVADDAAFAEDGGYRRP 326

Query: 932  MRPLPGDCGYFLHAHQL-VLHHPTTNEVIQITAPLPYMLQSQEEA 1063
             +P+PGDCGY+LHAHQ+ +L+   T++V++I APLP +LQ+  EA
Sbjct: 327  NQPVPGDCGYYLHAHQVDLLNLLNTHQVVKIVAPLPPILQTSSEA 371


>ref|NP_974416.1| RNA pseudourine synthase 5 [Arabidopsis thaliana]
           gi|229891781|sp|Q5M721.2|PUS5_ARATH RecName: Full=RNA
           pseudouridine synthase 5; AltName: Full=RNA
           pseudouridylate synthase 5; AltName: Full=RNA-uridine
           isomerase 5 gi|332645400|gb|AEE78921.1| RNA pseudourine
           synthase 5 [Arabidopsis thaliana]
          Length = 369

 Score =  337 bits (863), Expect(2) = e-121
 Identities = 168/257 (65%), Positives = 206/257 (80%), Gaps = 7/257 (2%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCCTLIS-FYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNP 179
           WP+ N GL Y D +  + S  T +S FY TK+ SSAP  GW+QRIQNGQI IDG++ K+P
Sbjct: 12  WPELNDGLAYKDAISSSESELTTVSEFYFTKYKSSAPLLGWIQRIQNGQIQIDGEVVKDP 71

Query: 180 DTILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVLTQ 359
           +T+LR G +LVY R+PWKEPD PY L+VLYED+ L+ALNKPSG+QVLPGGLFQQRTVLTQ
Sbjct: 72  NTLLRSGSKLVYSRLPWKEPDTPYSLEVLYEDDDLIALNKPSGLQVLPGGLFQQRTVLTQ 131

Query: 360 LQWRGGKSGD-----QEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVVHEK 524
           LQW  GK+       + PHPVPVHRLGRGTSGILLCAK+KLAKT+L+AYFA+GT++V   
Sbjct: 132 LQWCFGKNDSYIGSRESPHPVPVHRLGRGTSGILLCAKTKLAKTKLAAYFAEGTSLVGSG 191

Query: 525 NTNTE-RSGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPALSK 701
           N + E  +GRK+SK+YRALA GI+++DEVVI QPIG +RY GVA+GLY+AS  GKPA SK
Sbjct: 192 NLDQECGTGRKLSKIYRALADGIVEEDEVVIKQPIGVVRYPGVAQGLYVASPEGKPAFSK 251

Query: 702 VKVLERDVQRNRSLVQV 752
           V VLERD ++N SLV+V
Sbjct: 252 VFVLERDREKNCSLVKV 268



 Score =  127 bits (320), Expect(2) = e-121
 Identities = 62/104 (59%), Positives = 81/104 (77%), Gaps = 3/104 (2%)
 Frame = +2

Query: 758  VTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDD--SHAKDGGYQRP 931
            +  VEIQSGRPHQIRIHL+Y+GHPL GDPLY +GG P  FD + VDD  + A+DGGY+RP
Sbjct: 265  LVKVEIQSGRPHQIRIHLAYMGHPLVGDPLYVAGGQPKCFDPDLVDDAAAFAEDGGYRRP 324

Query: 932  MRPLPGDCGYFLHAHQLVLHH-PTTNEVIQITAPLPYMLQSQEE 1060
             + +PGDCGY LHAHQ+ L +   T++V++I APLP +LQ++ E
Sbjct: 325  NQAVPGDCGYHLHAHQVELPNLLNTHKVVKIVAPLPPILQTRCE 368


>emb|CAC07917.1| putative protein [Arabidopsis thaliana]
          Length = 376

 Score =  330 bits (845), Expect(2) = e-119
 Identities = 168/264 (63%), Positives = 206/264 (78%), Gaps = 14/264 (5%)
 Frame = +3

Query: 3   WPDFNGGLTYADTVKPNTSCCTLIS-FYSTKHSSSAPFQGWLQRIQNGQITIDGQIEKNP 179
           WP+ N GL Y D +  + S  T +S FY TK+ SSAP  GW+QRIQNGQI IDG++ K+P
Sbjct: 12  WPELNDGLAYKDAISSSESELTTVSEFYFTKYKSSAPLLGWIQRIQNGQIQIDGEVVKDP 71

Query: 180 DTILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVLTQ 359
           +T+LR G +LVY R+PWKEPD PY L+VLYED+ L+ALNKPSG+QVLPGGLFQQRTVLTQ
Sbjct: 72  NTLLRSGSKLVYSRLPWKEPDTPYSLEVLYEDDDLIALNKPSGLQVLPGGLFQQRTVLTQ 131

Query: 360 LQWRGGKSGD-----QEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVVHEK 524
           LQW  GK+       + PHPVPVHRLGRGTSGILLCAK+KLAKT+L+AYFA+GT++V   
Sbjct: 132 LQWCFGKNDSYIGSRESPHPVPVHRLGRGTSGILLCAKTKLAKTKLAAYFAEGTSLVGSG 191

Query: 525 NTNTE-RSGRKISKLYRALATGIIDKDE-------VVISQPIGAMRYAGVAKGLYMASSS 680
           N + E  +GRK+SK+YRALA GI+++DE       VVI QPIG +RY GVA+GLY+AS  
Sbjct: 192 NLDQECGTGRKLSKIYRALADGIVEEDEARPFLLFVVIKQPIGVVRYPGVAQGLYVASPE 251

Query: 681 GKPALSKVKVLERDVQRNRSLVQV 752
           GKPA SKV VLERD ++N SLV+V
Sbjct: 252 GKPAFSKVFVLERDREKNCSLVKV 275



 Score =  127 bits (320), Expect(2) = e-119
 Identities = 62/104 (59%), Positives = 81/104 (77%), Gaps = 3/104 (2%)
 Frame = +2

Query: 758  VTNVEIQSGRPHQIRIHLSYIGHPLAGDPLYASGGVPISFDSESVDD--SHAKDGGYQRP 931
            +  VEIQSGRPHQIRIHL+Y+GHPL GDPLY +GG P  FD + VDD  + A+DGGY+RP
Sbjct: 272  LVKVEIQSGRPHQIRIHLAYMGHPLVGDPLYVAGGQPKCFDPDLVDDAAAFAEDGGYRRP 331

Query: 932  MRPLPGDCGYFLHAHQLVLHH-PTTNEVIQITAPLPYMLQSQEE 1060
             + +PGDCGY LHAHQ+ L +   T++V++I APLP +LQ++ E
Sbjct: 332  NQAVPGDCGYHLHAHQVELPNLLNTHKVVKIVAPLPPILQTRCE 375