BLASTX nr result
ID: Papaver25_contig00020778
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00020778
(830 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE61535.1| hypothetical protein OsJ_15844 [Oryza sativa Japo... 103 1e-19
gb|EEC77828.1| hypothetical protein OsI_17044 [Oryza sativa Indi... 103 1e-19
ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phas... 101 4e-19
ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phas... 101 4e-19
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin... 101 4e-19
gb|EMT22317.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 100 5e-19
gb|EMS66983.1| DNA-directed RNA polymerase D subunit 1 [Triticum... 100 5e-19
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun... 95 3e-17
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub... 94 6e-17
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub... 94 6e-17
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su... 87 8e-15
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 87 8e-15
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub... 85 3e-14
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope... 85 3e-14
gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus... 84 5e-14
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub... 83 1e-13
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 83 1e-13
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera] 83 1e-13
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-... 82 3e-13
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub... 81 4e-13
>gb|EEE61535.1| hypothetical protein OsJ_15844 [Oryza sativa Japonica Group]
Length = 1623
Score = 103 bits (256), Expect = 1e-19
Identities = 54/132 (40%), Positives = 79/132 (59%), Gaps = 26/132 (19%)
Frame = +3
Query: 351 EMCLRVSMAIKFKNFKFWSIIKNACLPIMDLIDWERSYPNSINDVSHAYGIEAAWE---- 518
E+ L+V M+ K+ KFW+ ++NAC+PIM+LIDWERS P + D +YGI++AW+
Sbjct: 1096 ELVLKVGMSEHCKSGKFWATLQNACIPIMELIDWERSRPERVYDNFCSYGIDSAWKFFVE 1155
Query: 519 ----------KNFR------------RPLFNFVQAAKDEAKDDLSGTLDAVAWGKKVPIG 632
+N RP +F+ AAK ++ D+LSGTLDA+AWGK+ G
Sbjct: 1156 SLRSTTDAIGRNIHRQHLLVVADCLSRPAHSFINAAKRDSVDNLSGTLDAIAWGKEPCAG 1215
Query: 633 TGGNFEIIYSQK 668
+ G F+I+YS K
Sbjct: 1216 SSGPFKILYSGK 1227
>gb|EEC77828.1| hypothetical protein OsI_17044 [Oryza sativa Indica Group]
Length = 1598
Score = 103 bits (256), Expect = 1e-19
Identities = 54/132 (40%), Positives = 79/132 (59%), Gaps = 26/132 (19%)
Frame = +3
Query: 351 EMCLRVSMAIKFKNFKFWSIIKNACLPIMDLIDWERSYPNSINDVSHAYGIEAAWE---- 518
E+ L+V M+ K+ KFW+ ++NAC+PIM+LIDWERS P + D +YGI++AW+
Sbjct: 1075 ELVLKVGMSEHCKSGKFWATLQNACIPIMELIDWERSRPERVYDNFCSYGIDSAWKFFVE 1134
Query: 519 ----------KNFR------------RPLFNFVQAAKDEAKDDLSGTLDAVAWGKKVPIG 632
+N RP +F+ AAK ++ D+LSGTLDA+AWGK+ G
Sbjct: 1135 SLRSTTDAIGRNIHRQHLLVVADCLSRPAHSFINAAKRDSVDNLSGTLDAIAWGKEPCTG 1194
Query: 633 TGGNFEIIYSQK 668
+ G F+I+YS K
Sbjct: 1195 SSGPFKILYSGK 1206
>ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
gi|561031869|gb|ESW30448.1| hypothetical protein
PHAVU_002G153700g [Phaseolus vulgaris]
Length = 1464
Score = 101 bits (251), Expect = 4e-19
Identities = 67/198 (33%), Positives = 98/198 (49%), Gaps = 62/198 (31%)
Frame = +3
Query: 261 FLGR--RKVVEVEKVDIVWNDLPRGSRT--SSSGEMCLRVSMAIKFKNFKFWSIIKNACL 428
FLG + ++++KVDI+WN+ +G+ + SSGE+ LRV++A +FW ++ N C
Sbjct: 1083 FLGTTIKGFMDIKKVDILWNNQSKGTNSYNGSSGELYLRVTVASSGNTGRFWGVLVNHCH 1142
Query: 429 PIMDLIDWERSYPNSINDVSHAYGIEAAWEKNFR------------------RPLFN--- 545
IM +IDW RS+P++IN +S AYGI+ AW+ ++ R L N
Sbjct: 1143 KIMQIIDWPRSHPDNINYLSSAYGIDVAWQYYYKSLASAISDTGKSILPKHLRLLANSMS 1202
Query: 546 -------------------------FVQA------------AKDEAKDDLSGTLDAVAWG 614
FVQA AK E D+L G+LDA+AWG
Sbjct: 1203 ASGEFVGLNAKGMAQQRQHASVSSPFVQACFSNPGRSFIKAAKSELTDNLQGSLDALAWG 1262
Query: 615 KKVPIGTGGNFEIIYSQK 668
+GT G F+IIYS+K
Sbjct: 1263 NCPSMGTSGLFDIIYSEK 1280
>ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
gi|561031868|gb|ESW30447.1| hypothetical protein
PHAVU_002G153700g [Phaseolus vulgaris]
Length = 1463
Score = 101 bits (251), Expect = 4e-19
Identities = 67/198 (33%), Positives = 98/198 (49%), Gaps = 62/198 (31%)
Frame = +3
Query: 261 FLGR--RKVVEVEKVDIVWNDLPRGSRT--SSSGEMCLRVSMAIKFKNFKFWSIIKNACL 428
FLG + ++++KVDI+WN+ +G+ + SSGE+ LRV++A +FW ++ N C
Sbjct: 1082 FLGTTIKGFMDIKKVDILWNNQSKGTNSYNGSSGELYLRVTVASSGNTGRFWGVLVNHCH 1141
Query: 429 PIMDLIDWERSYPNSINDVSHAYGIEAAWEKNFR------------------RPLFN--- 545
IM +IDW RS+P++IN +S AYGI+ AW+ ++ R L N
Sbjct: 1142 KIMQIIDWPRSHPDNINYLSSAYGIDVAWQYYYKSLASAISDTGKSILPKHLRLLANSMS 1201
Query: 546 -------------------------FVQA------------AKDEAKDDLSGTLDAVAWG 614
FVQA AK E D+L G+LDA+AWG
Sbjct: 1202 ASGEFVGLNAKGMAQQRQHASVSSPFVQACFSNPGRSFIKAAKSELTDNLQGSLDALAWG 1261
Query: 615 KKVPIGTGGNFEIIYSQK 668
+GT G F+IIYS+K
Sbjct: 1262 NCPSMGTSGLFDIIYSEK 1279
>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 1475
Score = 101 bits (251), Expect = 4e-19
Identities = 66/190 (34%), Positives = 94/190 (49%), Gaps = 60/190 (31%)
Frame = +3
Query: 279 VVEVEKVDIVWNDLPRGSRTSSS--GEMCLRVSMAIKFKNFKFWSIIKNACLPIMDLIDW 452
++E+ KVDI+W D PR S+T + GE+ LRVSM+ + + W+++ + CLPIMD+IDW
Sbjct: 1087 LMEINKVDILWKDWPRISKTHNQPYGELYLRVSMSADSEKTRLWNLLMDYCLPIMDMIDW 1146
Query: 453 ERSYPNSINDVSHAYGIEAAWE-------------------------------------- 518
S P+++ D S AYGI+A W+
Sbjct: 1147 TCSRPDNVRDFSLAYGIDAGWKFFLQRLESAISDVGKSVLPEHMLLVANCLSVTGEFVGL 1206
Query: 519 --KNFRRPLFN------FVQA------------AKDEAKDDLSGTLDAVAWGKKVPIGTG 638
K ++R + FVQA AK KDDL G+LDA+AWGK +GT
Sbjct: 1207 NAKGWKRQREDASVSSPFVQACFSSPGNCFIKAAKAGVKDDLQGSLDALAWGKVPSVGT- 1265
Query: 639 GNFEIIYSQK 668
G F+I+YS K
Sbjct: 1266 GQFDIVYSGK 1275
>gb|EMT22317.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
Length = 1334
Score = 100 bits (250), Expect = 5e-19
Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 27/160 (16%)
Frame = +3
Query: 282 VEVEKVDIVWNDLPRGSRTSSSGEMCLRVSMAIKF-KNFKFWSIIKNACLPIMDLIDWER 458
+E +KV+I + E+ ++V M+ + K+ KFW+ ++ +C+ IM+LIDWER
Sbjct: 1031 LEFKKVEI---------QCQEDSELVVKVVMSEEHCKSVKFWATLQKSCIAIMELIDWER 1081
Query: 459 SYPNSINDVSHAYGIEAAWE--------------KNFR------------RPLFNFVQAA 560
S P S+ D+ +YGI++AW+ +N R RP F+ AA
Sbjct: 1082 SRPGSVYDIFCSYGIDSAWKYFVESLRSKTDDIGRNIRREHLLVVANCLSRPAHTFINAA 1141
Query: 561 KDEAKDDLSGTLDAVAWGKKVPIGTGGNFEIIYSQKHRAP 680
K + D+L GT+DA+AWGK+ GT G F+IIYS K AP
Sbjct: 1142 KQSSVDNLCGTVDAMAWGKEPSTGTSGPFKIIYSGKAHAP 1181
>gb|EMS66983.1| DNA-directed RNA polymerase D subunit 1 [Triticum urartu]
Length = 1402
Score = 100 bits (250), Expect = 5e-19
Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 27/160 (16%)
Frame = +3
Query: 282 VEVEKVDIVWNDLPRGSRTSSSGEMCLRVSMAIKF-KNFKFWSIIKNACLPIMDLIDWER 458
+E +KV+I + E+ ++V M+ + K+ KFW+ ++ +C+ IM+LIDWER
Sbjct: 1091 LEFKKVEI---------QCQEDSELVVKVVMSEEHCKSVKFWATLQKSCIAIMELIDWER 1141
Query: 459 SYPNSINDVSHAYGIEAAWE--------------KNFR------------RPLFNFVQAA 560
S P S+ D+ +YGI++AW+ +N R RP F+ AA
Sbjct: 1142 SRPGSVYDIFCSYGIDSAWKYFVESLRSKTDDIGRNIRREHLLVVANCLSRPAHTFINAA 1201
Query: 561 KDEAKDDLSGTLDAVAWGKKVPIGTGGNFEIIYSQKHRAP 680
K + D+L GT+DA+AWGK+ GT G F+IIYS K AP
Sbjct: 1202 KQSSVDNLCGTVDAMAWGKEPSTGTSGPFKIIYSGKAHAP 1241
>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
gi|462406650|gb|EMJ12114.1| hypothetical protein
PRUPE_ppa000278mg [Prunus persica]
Length = 1356
Score = 95.1 bits (235), Expect = 3e-17
Identities = 56/111 (50%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
Frame = +3
Query: 282 VEVEKVDIVWNDLPRGSRT--SSSGEMCLRVSMAIKFKNFKFWSIIKNACLPIMDLIDWE 455
+EV+KVDI+WND PR S+ SSGE+ LRVSM+ K + WS++ + CL IMDLIDW
Sbjct: 996 LEVKKVDILWNDHPRESKKIHGSSGELYLRVSMSGKTGRRRLWSMLMDNCLQIMDLIDWS 1055
Query: 456 RSYPNSINDVSHAYGIEAAWEKNFRRPLFNFVQAAKDEAKDDLSGTLDAVA 608
RS+P++++D AYGI+A W K F L N AA D KD L L VA
Sbjct: 1056 RSHPDNVHDYCIAYGIDAGW-KYF---LNNLETAANDIGKDILPQHLILVA 1102
>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
[Cicer arietinum]
Length = 1474
Score = 94.0 bits (232), Expect = 6e-17
Identities = 59/190 (31%), Positives = 87/190 (45%), Gaps = 60/190 (31%)
Frame = +3
Query: 279 VVEVEKVDIVWNDLPRGSRT--SSSGEMCLRVSMAIKFKNFKFWSIIKNACLPIMDLIDW 452
+ E++KVDI+W DL +GS++ SSGE+ LRV+M+ FW + N C IM +IDW
Sbjct: 1100 IFEIKKVDILWKDLSKGSKSYNGSSGELYLRVTMSSDSDRGTFWGALINHCHRIMPMIDW 1159
Query: 453 ERSYPNSINDVSHAYGIEAAW--------------------------------------- 515
RS+P++I+ A+GI+A W
Sbjct: 1160 ARSHPDNIHHFCSAFGIDAGWQHFLHNLSSATSDTGTSILPKHLRLVANSLSASGEFVGL 1219
Query: 516 -------EKNFRRPLFNFVQA------------AKDEAKDDLSGTLDAVAWGKKVPIGTG 638
++N FVQA AK D+L GTLD +AWG + +GT
Sbjct: 1220 NSKGMARQRNHASVSSPFVQACFSNPGSTFLKAAKSGVVDNLQGTLDGLAWGNCLSMGTS 1279
Query: 639 GNFEIIYSQK 668
G F+++YS+K
Sbjct: 1280 GQFDVMYSEK 1289
>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
[Cicer arietinum] gi|502160026|ref|XP_004511608.1|
PREDICTED: DNA-directed RNA polymerase D subunit 1-like
isoform X2 [Cicer arietinum]
gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
RNA polymerase D subunit 1-like isoform X3 [Cicer
arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
DNA-directed RNA polymerase D subunit 1-like isoform X4
[Cicer arietinum]
Length = 1475
Score = 94.0 bits (232), Expect = 6e-17
Identities = 59/190 (31%), Positives = 87/190 (45%), Gaps = 60/190 (31%)
Frame = +3
Query: 279 VVEVEKVDIVWNDLPRGSRT--SSSGEMCLRVSMAIKFKNFKFWSIIKNACLPIMDLIDW 452
+ E++KVDI+W DL +GS++ SSGE+ LRV+M+ FW + N C IM +IDW
Sbjct: 1101 IFEIKKVDILWKDLSKGSKSYNGSSGELYLRVTMSSDSDRGTFWGALINHCHRIMPMIDW 1160
Query: 453 ERSYPNSINDVSHAYGIEAAW--------------------------------------- 515
RS+P++I+ A+GI+A W
Sbjct: 1161 ARSHPDNIHHFCSAFGIDAGWQHFLHNLSSATSDTGTSILPKHLRLVANSLSASGEFVGL 1220
Query: 516 -------EKNFRRPLFNFVQA------------AKDEAKDDLSGTLDAVAWGKKVPIGTG 638
++N FVQA AK D+L GTLD +AWG + +GT
Sbjct: 1221 NSKGMARQRNHASVSSPFVQACFSNPGSTFLKAAKSGVVDNLQGTLDGLAWGNCLSMGTS 1280
Query: 639 GNFEIIYSQK 668
G F+++YS+K
Sbjct: 1281 GQFDVMYSEK 1290
>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Solanum tuberosum]
Length = 1233
Score = 87.0 bits (214), Expect = 8e-15
Identities = 39/78 (50%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 291 EKVDIVWNDLPRGSRTS--SSGEMCLRVSMAIKFKNFKFWSIIKNACLPIMDLIDWERSY 464
+KVDI+W +LP S++S S+GE+ L+V M+ KFW+ + ++CL I DLIDWERSY
Sbjct: 870 KKVDILWKELPSPSKSSRGSTGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSY 929
Query: 465 PNSINDVSHAYGIEAAWE 518
P+ ++D++ AYGI+ AWE
Sbjct: 930 PDDVHDLTVAYGIDVAWE 947
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 87.0 bits (214), Expect = 8e-15
Identities = 39/78 (50%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 291 EKVDIVWNDLPRGSRTS--SSGEMCLRVSMAIKFKNFKFWSIIKNACLPIMDLIDWERSY 464
+KVDI+W +LP S++S S+GE+ L+V M+ KFW+ + ++CL I DLIDWERSY
Sbjct: 1083 KKVDILWKELPSPSKSSRGSTGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSY 1142
Query: 465 PNSINDVSHAYGIEAAWE 518
P+ ++D++ AYGI+ AWE
Sbjct: 1143 PDDVHDLTVAYGIDVAWE 1160
>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
lycopersicum]
Length = 1446
Score = 85.1 bits (209), Expect = 3e-14
Identities = 38/78 (48%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Frame = +3
Query: 291 EKVDIVWNDLPRGSRTSS--SGEMCLRVSMAIKFKNFKFWSIIKNACLPIMDLIDWERSY 464
+KVDI+W +LP S++S +GE+ L+V M+ KFW+ + ++CL I DLIDWERSY
Sbjct: 1083 KKVDILWKELPSPSKSSRGPTGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSY 1142
Query: 465 PNSINDVSHAYGIEAAWE 518
P+ ++D++ AYGI+ AWE
Sbjct: 1143 PDDVHDLTVAYGIDVAWE 1160
>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
Length = 1138
Score = 85.1 bits (209), Expect = 3e-14
Identities = 38/78 (48%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Frame = +3
Query: 291 EKVDIVWNDLPRGSRTSS--SGEMCLRVSMAIKFKNFKFWSIIKNACLPIMDLIDWERSY 464
+KVDI+W +LP S++S +GE+ L+V M+ KFW+ + ++CL I DLIDWERSY
Sbjct: 775 KKVDILWKELPSPSKSSRGPTGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSY 834
Query: 465 PNSINDVSHAYGIEAAWE 518
P+ ++D++ AYGI+ AWE
Sbjct: 835 PDDVHDLTVAYGIDVAWE 852
>gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus guttatus]
Length = 1379
Score = 84.3 bits (207), Expect = 5e-14
Identities = 39/80 (48%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
Frame = +3
Query: 285 EVEKVDIVWNDLPRGSRTSSS--GEMCLRVSMAIKFKNFKFWSIIKNACLPIMDLIDWER 458
E +KVDI+W D P+ + S S G+ LRV M+ + KFWSI+K+ CLPI ++IDW++
Sbjct: 1019 EFKKVDILWKDDPKHPKFSRSPPGKPFLRVVMSEYCERTKFWSILKDKCLPIRNIIDWKQ 1078
Query: 459 SYPNSINDVSHAYGIEAAWE 518
S+P+ I D+S AYG++AAW+
Sbjct: 1079 SHPDDILDISEAYGVDAAWQ 1098
>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1438
Score = 82.8 bits (203), Expect = 1e-13
Identities = 47/110 (42%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Frame = +3
Query: 282 VEVEKVDIVWNDLPRGSRTSSSGEMCLRVSMAIKF-KNFKFWSIIKNACLPIMDLIDWER 458
+E++KVDI+W D P SSGE+CLRVSM+ K K W+++ + C+P+MD+IDW R
Sbjct: 1081 LEIKKVDILWIDRP-----GSSGELCLRVSMSGKTRKGTTLWNMLMDDCIPVMDMIDWSR 1135
Query: 459 SYPNSINDVSHAYGIEAAWEKNFRRPLFNFVQAAKDEAKDDLSGTLDAVA 608
S+P++++D+ AYGI+ +K+F L A KD K L L VA
Sbjct: 1136 SHPDNVHDICTAYGIDVG-QKHF---LNKLESATKDVGKTILPQHLLLVA 1181
>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Vitis vinifera]
Length = 1560
Score = 82.8 bits (203), Expect = 1e-13
Identities = 38/81 (46%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Frame = +3
Query: 279 VVEVEKVDIVWNDLPRGS-RTSSSGEMCLRVSMAIKFKNFKFWSIIKNACLPIMDLIDWE 455
+++V+KVDI+WND P SSSG + LRV ++ FW ++ +ACL IMD+IDWE
Sbjct: 1121 LLDVKKVDILWNDNPDSDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWE 1180
Query: 456 RSYPNSINDVSHAYGIEAAWE 518
RS+P++I+D+ YGI+A W+
Sbjct: 1181 RSHPDNIHDIFVVYGIDAGWK 1201
>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
Length = 1393
Score = 82.8 bits (203), Expect = 1e-13
Identities = 38/81 (46%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Frame = +3
Query: 279 VVEVEKVDIVWNDLPRGS-RTSSSGEMCLRVSMAIKFKNFKFWSIIKNACLPIMDLIDWE 455
+++V+KVDI+WND P SSSG + LRV ++ FW ++ +ACL IMD+IDWE
Sbjct: 1236 LLDVKKVDILWNDNPDSDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWE 1295
Query: 456 RSYPNSINDVSHAYGIEAAWE 518
RS+P++I+D+ YGI+A W+
Sbjct: 1296 RSHPDNIHDIFVVYGIDAGWK 1316
>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
polymerase II subunit RPB1-B, putative [Theobroma cacao]
Length = 1484
Score = 81.6 bits (200), Expect = 3e-13
Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Frame = +3
Query: 285 EVEKVDIVWNDLPRGSRT--SSSGEMCLRVSMAIKFKNFKFWSIIKNACLPIMDLIDWER 458
E++KVDI+W D + S+ SS GE+ LRV ++ F K W ++ N CL IMD+IDW R
Sbjct: 1115 EIKKVDILWKDRLKVSKPHKSSCGELYLRVFVSGDFGITKLWGVLMNDCLQIMDMIDWTR 1174
Query: 459 SYPNSINDVSHAYGIEAAWEKNFRRPLFNFVQAAKDEAKDDLSGTLDAVA 608
S+P++IN + AYGI+A W K F L N A D K L+ L VA
Sbjct: 1175 SHPDNINQLCLAYGIDAGW-KFF---LNNLKSAISDTGKTILNEHLLVVA 1220
Score = 64.3 bits (155), Expect = 5e-08
Identities = 32/60 (53%), Positives = 39/60 (65%)
Frame = +3
Query: 489 HAYGIEAAWEKNFRRPLFNFVQAAKDEAKDDLSGTLDAVAWGKKVPIGTGGNFEIIYSQK 668
HAY + F P +FV+AAK A DDL GT+DA+AWG+ IGTGG F+IIYS K
Sbjct: 1243 HAYVSSPFMQACFSNPSASFVKAAKTGASDDLQGTIDALAWGRIPHIGTGGQFDIIYSVK 1302
>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Cucumis sativus]
Length = 1469
Score = 81.3 bits (199), Expect = 4e-13
Identities = 38/83 (45%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = +3
Query: 273 RKVVEVEKVDIVWNDLPRGSRTSSS-GEMCLRVSMAIKFKNFKFWSIIKNACLPIMDLID 449
R E+++VDI WND P+ + S GE+ LRV+M+ + N +FW+ + N CLPIMDLID
Sbjct: 1099 RGFTEIDRVDITWNDRPKVPKPRCSHGELYLRVTMSGE-GNSRFWATLMNNCLPIMDLID 1157
Query: 450 WERSYPNSINDVSHAYGIEAAWE 518
W RS+P++ + + AYGI++ W+
Sbjct: 1158 WTRSHPDNTHSLCLAYGIDSGWK 1180