BLASTX nr result

ID: Papaver25_contig00020584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00020584
         (500 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314023.1| basic helix-loop-helix family protein [Popul...    62   6e-08
ref|XP_002513187.1| DNA binding protein, putative [Ricinus commu...    57   2e-06
ref|XP_004308213.1| PREDICTED: transcription factor bHLH122-like...    56   5e-06

>ref|XP_002314023.1| basic helix-loop-helix family protein [Populus trichocarpa]
           gi|222850431|gb|EEE87978.1| basic helix-loop-helix
           family protein [Populus trichocarpa]
          Length = 421

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 51/150 (34%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
 Frame = +1

Query: 43  MNLLFPSSSTFKNSSEGGGGDNLQRNREASMDVNLXXXXXXXXXXXXXXXNSGLMRYRSA 222
           MNLL+  SS+FK S      D   R  +  MD+N                NSGLMRYRSA
Sbjct: 1   MNLLY--SSSFKYS------DGELRKSQEFMDLN---PYHYHQQQQQIQQNSGLMRYRSA 49

Query: 223 PSSLLEKLIN---GEDEGGCDNFIPPPTHSSPSEAESIFARFMSIAG----NDSSDLREI 381
           PSS+LE L+N   G D GG ++       SS  E +++ ARFMS       + S +L+E 
Sbjct: 50  PSSILESLVNGTSGHDGGGIESGDYRYLRSSSPEMDTMLARFMSSCNGSGDSSSQNLQEF 109

Query: 382 NEKSAVNNRNPPQFMEQETIEENNVFPPTS 471
            E+ A+        M  +++  +N+    S
Sbjct: 110 GERPAIKQEGGDSEMVYQSLPGHNLVTDNS 139


>ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
           gi|223547685|gb|EEF49178.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 432

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 54/158 (34%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
 Frame = +1

Query: 1   VVVMYSGSQTSAKDMNLLFPSSSTFKNSSEGGGGDNLQRNREASMDVNLXXXXXXXXXXX 180
           VV  + GS+   ++M+LL+  S++FK+  EG      ++N+E  MD+N            
Sbjct: 4   VVGGFQGSEEE-EEMSLLY--STSFKHQ-EG----EFRKNQEF-MDLN-----HHHCNQD 49

Query: 181 XXXXNSGLMRYRSAPSSLLEKLINGEDEGG---CDNFIPPPTHSSPSEAESIFARFMSIA 351
               NSGLMRYRSAP S L+ LING   GG   C ++      SS  E E+I +RFMS  
Sbjct: 50  PLHHNSGLMRYRSAPGSFLDSLINGTTSGGGNECQDY--RSFRSSSPEMETILSRFMSTC 107

Query: 352 G----NDSSDLREINEKSAVNNR-NPPQFMEQETIEEN 450
                ++S +L+E  E+  +      PQ + Q +   N
Sbjct: 108 NGSGDSNSQNLQEYGERPEMKQEMEDPQMVYQSSAVNN 145


>ref|XP_004308213.1| PREDICTED: transcription factor bHLH122-like [Fragaria vesca subsp.
           vesca]
          Length = 429

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
 Frame = +1

Query: 193 NSGLMRYRSAPSSLLEKLINGEDEGGCDNF--IPPPTHSSPSEAESIFARFMSIAGNDSS 366
           +SGLMRYRSAPSS+L  L++     GC++F     P  SSP E E++ ARF+S       
Sbjct: 41  SSGLMRYRSAPSSVLLDLVDNNGGAGCEDFRDFRYPRPSSP-EVETVLARFISSCNAPDG 99

Query: 367 DLREINEKSAVNNRNPPQFMEQETIEENNVFPPTSQMMFQNPSI 498
           D    +    +    P +    +++ + N +  + QMM+Q   +
Sbjct: 100 DNGSNHSAHNLFQERPVKQEAGDSVSKQNGYSNSPQMMYQTQQV 143


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