BLASTX nr result

ID: Papaver25_contig00019359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00019359
         (1577 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004306191.1| PREDICTED: putative ribonuclease H protein A...    63   4e-07
ref|XP_004308482.1| PREDICTED: putative ribonuclease H protein A...    59   6e-06

>ref|XP_004306191.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 755

 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 37/113 (32%), Positives = 56/113 (49%)
 Frame = +2

Query: 1223 KALDPEQAEAKSLLEAILWTKRKGIRKLHMEGDCFNVISALNGSSTSIKWTTKNLIFDCL 1402
            KA+  E AEA++LL+ +   K  G+    ME DC ++ISAL     S+ W   +      
Sbjct: 637  KAISAEAAEAQALLQGLKLAKSVGLISFSMEADCLSLISALKSPKGSVSWFPASWFQQIK 696

Query: 1403 SLLVSFDSWICNYVHRNINHVADSLAKYARNICNEEEWSTSMPSWLSLCLQED 1561
            SL  SF S   +++ R  N  AD+ A +A ++     W  + P +L   LQ D
Sbjct: 697  SLAGSFSSINWSWISREANAAADTAAHFASSLECSLNWVHNPPCFLLHVLQSD 749


>ref|XP_004308482.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 196

 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 38/123 (30%), Positives = 59/123 (47%)
 Frame = +2

Query: 1184 ESGNCDGSRCWRTKALDPEQAEAKSLLEAILWTKRKGIRKLHMEGDCFNVISALNGSSTS 1363
            E+G    + C+         AEA +L  ++++ K +G+ K+ +EGD   VI  +NG S S
Sbjct: 60   ETGKSLAAACFNLGTTTVPVAEAIALRNSLIYAKNQGLSKIEVEGDSKLVIDVVNGVS-S 118

Query: 1364 IKWTTKNLIFDCLSLLVSFDSWICNYVHRNINHVADSLAKYARNICNEEEWSTSMPSWLS 1543
              W    L+ D  +L  SF+     YV R  N VA++LA     + N   W   +P  +S
Sbjct: 119  PPWKLLKLVQDIKALSSSFEFVKFKYVFREANFVANALANLGHMVDNMNLWEECVPPEVS 178

Query: 1544 LCL 1552
              L
Sbjct: 179  SAL 181


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