BLASTX nr result
ID: Papaver25_contig00019050
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00019050
(631 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub... 206 6e-51
ref|XP_006601019.1| PREDICTED: probable DNA-directed RNA polymer... 204 2e-50
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer... 204 2e-50
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub... 201 1e-49
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub... 201 1e-49
ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I sub... 201 2e-49
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub... 201 2e-49
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro... 199 6e-49
ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phas... 197 3e-48
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer... 195 8e-48
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer... 194 1e-47
ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citr... 194 1e-47
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat... 193 4e-47
ref|XP_004486056.1| PREDICTED: DNA-directed RNA polymerase I sub... 192 9e-47
ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I sub... 191 2e-46
ref|XP_003609884.1| DNA-directed RNA polymerase [Medicago trunca... 191 2e-46
ref|XP_002297732.2| DNA-directed RNA polymerase family protein [... 190 3e-46
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub... 188 1e-45
ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Caps... 185 8e-45
gb|AAG10602.1|AC008030_2 Similar to DNA-directed RNA polymerase ... 185 1e-44
>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
vinifera]
Length = 1142
Score = 206 bits (523), Expect = 6e-51
Identities = 102/132 (77%), Positives = 110/132 (83%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
VDQ+TRQP FGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGS+L
Sbjct: 1012 VDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSIL 1071
Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
TT+ Q KR VRE G LPPGR PKKVTCHAC+TSKGMETV+MPY+FR+LAAELAAMNI
Sbjct: 1072 TTSIIQPQKRAVREIG-GLPPGRAPKKVTCHACQTSKGMETVSMPYIFRFLAAELAAMNI 1130
Query: 363 KMTLNLTNGAEA 398
KMTL L+NGA A
Sbjct: 1131 KMTLQLSNGAGA 1142
>ref|XP_006601019.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X2 [Glycine max]
Length = 1004
Score = 204 bits (519), Expect = 2e-50
Identities = 102/132 (77%), Positives = 110/132 (83%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
+DQ+TRQP FGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCSLCGS+L
Sbjct: 872 IDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSML 931
Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
TTT Q KR VRE G LPPGR PKKVTCHAC+TSKGMETVAMPYVFRYLAAELAAMNI
Sbjct: 932 TTTFTQPQKRPVREIG-GLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNI 990
Query: 363 KMTLNLTNGAEA 398
KMTL L++GA A
Sbjct: 991 KMTLKLSDGAGA 1002
>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Glycine max]
Length = 1175
Score = 204 bits (519), Expect = 2e-50
Identities = 102/132 (77%), Positives = 110/132 (83%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
+DQ+TRQP FGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCSLCGS+L
Sbjct: 1043 IDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSML 1102
Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
TTT Q KR VRE G LPPGR PKKVTCHAC+TSKGMETVAMPYVFRYLAAELAAMNI
Sbjct: 1103 TTTFTQPQKRPVREIG-GLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNI 1161
Query: 363 KMTLNLTNGAEA 398
KMTL L++GA A
Sbjct: 1162 KMTLKLSDGAGA 1173
>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X2
[Glycine max]
Length = 1151
Score = 201 bits (511), Expect = 1e-49
Identities = 100/130 (76%), Positives = 108/130 (83%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
+DQ+TRQP FGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCSLCGS+L
Sbjct: 1019 IDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSML 1078
Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
TT Q KR VRE G LPPGR PKKVTCHAC+TSKGMETVAMPYVFRYLAAELAAMNI
Sbjct: 1079 ATTFIQPQKRPVREIG-GLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNI 1137
Query: 363 KMTLNLTNGA 392
KMTL L++GA
Sbjct: 1138 KMTLKLSDGA 1147
>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
[Glycine max]
Length = 1175
Score = 201 bits (511), Expect = 1e-49
Identities = 100/130 (76%), Positives = 108/130 (83%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
+DQ+TRQP FGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCSLCGS+L
Sbjct: 1043 IDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSML 1102
Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
TT Q KR VRE G LPPGR PKKVTCHAC+TSKGMETVAMPYVFRYLAAELAAMNI
Sbjct: 1103 ATTFIQPQKRPVREIG-GLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNI 1161
Query: 363 KMTLNLTNGA 392
KMTL L++GA
Sbjct: 1162 KMTLKLSDGA 1171
>ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
sativus]
Length = 719
Score = 201 bits (510), Expect = 2e-49
Identities = 99/130 (76%), Positives = 109/130 (83%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
VDQ+TRQP FGEMERDSMLAHGA+YLLHDRLHTCSDHHIADVCSLCGS+L
Sbjct: 590 VDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSVL 649
Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
T++ Q KR VRE G LPPG+ PK+VTCHACKTSKGMETVAMPYVF+YLAAELAAMNI
Sbjct: 650 TSSFVQPPKRAVREIG-GLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNI 708
Query: 363 KMTLNLTNGA 392
KMTL L++GA
Sbjct: 709 KMTLQLSSGA 718
>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
sativus]
Length = 1173
Score = 201 bits (510), Expect = 2e-49
Identities = 99/130 (76%), Positives = 109/130 (83%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
VDQ+TRQP FGEMERDSMLAHGA+YLLHDRLHTCSDHHIADVCSLCGS+L
Sbjct: 1044 VDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSVL 1103
Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
T++ Q KR VRE G LPPG+ PK+VTCHACKTSKGMETVAMPYVF+YLAAELAAMNI
Sbjct: 1104 TSSFVQPPKRAVREIG-GLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNI 1162
Query: 363 KMTLNLTNGA 392
KMTL L++GA
Sbjct: 1163 KMTLQLSSGA 1172
>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
isoform 2 [Theobroma cacao]
Length = 1180
Score = 199 bits (506), Expect = 6e-49
Identities = 100/132 (75%), Positives = 108/132 (81%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
VDQITRQP FGEMERD+MLAHGAAYLLHDRLHTCSD+HIADVCSLCGS+L
Sbjct: 1050 VDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHTCSDYHIADVCSLCGSIL 1109
Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
TT+ Q KR+VRE G LPP R PKKVTCHAC+TSKGMETVAMPYVFRYLAAELAAMNI
Sbjct: 1110 TTSIVQPPKRVVREIG-GLPPARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNI 1168
Query: 363 KMTLNLTNGAEA 398
MT+ L +GA A
Sbjct: 1169 TMTIQLNSGAGA 1180
>ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
gi|561006696|gb|ESW05690.1| hypothetical protein
PHAVU_011G201300g [Phaseolus vulgaris]
Length = 1180
Score = 197 bits (500), Expect = 3e-48
Identities = 98/135 (72%), Positives = 109/135 (80%), Gaps = 4/135 (2%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
+DQ+TRQP FGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCSLCGS+L
Sbjct: 1043 IDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSML 1102
Query: 183 TTTSAQTHKRIVREQG----EKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELA 350
+TT Q KR VR+ G +LPPGR KKV+CHAC+TSKGMETVAMPYVFRYLAAELA
Sbjct: 1103 STTFIQPQKRPVRQIGGLPPGRLPPGRAAKKVSCHACQTSKGMETVAMPYVFRYLAAELA 1162
Query: 351 AMNIKMTLNLTNGAE 395
AMNIKMTL L +GAE
Sbjct: 1163 AMNIKMTLKLNDGAE 1177
>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Cicer arietinum]
gi|502078798|ref|XP_004486058.1| PREDICTED: probable
DNA-directed RNA polymerase I subunit RPA2-like isoform
X2 [Cicer arietinum]
Length = 1177
Score = 195 bits (496), Expect = 8e-48
Identities = 95/131 (72%), Positives = 107/131 (81%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
+DQ+TRQP FGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCS+CGS+L
Sbjct: 1047 IDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSICGSML 1106
Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
TTT Q KR VRE G LPP R P+KVTCHAC++SKGME VAMPY+FRYLAAELAAMNI
Sbjct: 1107 TTTFQQPRKRPVREIG-GLPPARAPRKVTCHACQSSKGMEKVAMPYIFRYLAAELAAMNI 1165
Query: 363 KMTLNLTNGAE 395
KMTL LT+G +
Sbjct: 1166 KMTLKLTDGVD 1176
>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Citrus sinensis]
Length = 1175
Score = 194 bits (494), Expect = 1e-47
Identities = 97/132 (73%), Positives = 106/132 (80%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
+DQITRQP FGEMERDS+LAHGAAYLLHDRLHTCSD+H+ADVCSLCGS+L
Sbjct: 1045 MDQITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHVADVCSLCGSVL 1104
Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
T T KR +RE G LPP R PKKVTCHAC+TSKGMETVAMPYVFRYLAAELAAMNI
Sbjct: 1105 TATFIHPQKRAIREIG-GLPPARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNI 1163
Query: 363 KMTLNLTNGAEA 398
K+TL L +GA A
Sbjct: 1164 KITLQLGDGATA 1175
>ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citrus clementina]
gi|557530116|gb|ESR41366.1| hypothetical protein
CICLE_v10024768mg [Citrus clementina]
Length = 1082
Score = 194 bits (494), Expect = 1e-47
Identities = 97/132 (73%), Positives = 106/132 (80%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
+DQITRQP FGEMERDS+LAHGAAYLLHDRLHTCSD+H+ADVCSLCGS+L
Sbjct: 952 MDQITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHVADVCSLCGSVL 1011
Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
T T KR +RE G LPP R PKKVTCHAC+TSKGMETVAMPYVFRYLAAELAAMNI
Sbjct: 1012 TATFIHPQKRAIREIG-GLPPARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNI 1070
Query: 363 KMTLNLTNGAEA 398
K+TL L +GA A
Sbjct: 1071 KITLQLGDGATA 1082
>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
subunit, putative [Ricinus communis]
Length = 1159
Score = 193 bits (490), Expect = 4e-47
Identities = 96/130 (73%), Positives = 106/130 (81%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
VDQITRQP FGEMERD+MLAHGAAYLLHDRLHTCSD+HIADVCSLCGS+L
Sbjct: 1029 VDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHTCSDYHIADVCSLCGSIL 1088
Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
TT+ QT KR+VR+ G LPP PKKV CH+C+TSKGMETVAMPYVFRYLAAELAAMNI
Sbjct: 1089 TTSFIQTQKRVVRDIG-GLPPVGAPKKVACHSCQTSKGMETVAMPYVFRYLAAELAAMNI 1147
Query: 363 KMTLNLTNGA 392
KM + L+ GA
Sbjct: 1148 KMNVQLSGGA 1157
>ref|XP_004486056.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cicer
arietinum]
Length = 336
Score = 192 bits (487), Expect = 9e-47
Identities = 94/131 (71%), Positives = 106/131 (80%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
+DQ+TRQP FGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCS+CGS+L
Sbjct: 206 IDQVTRQPIKGQKSGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSICGSML 265
Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
TTT Q KR VRE G L P R P+KVTCHAC++SKGME VAMPY+FRYLAAELAAMNI
Sbjct: 266 TTTFQQPRKRPVREIG-GLRPARAPRKVTCHACQSSKGMEKVAMPYIFRYLAAELAAMNI 324
Query: 363 KMTLNLTNGAE 395
KMTL LT+G +
Sbjct: 325 KMTLKLTDGVD 335
>ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
vesca subsp. vesca]
Length = 1171
Score = 191 bits (485), Expect = 2e-46
Identities = 95/132 (71%), Positives = 105/132 (79%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
VDQ+TRQP FGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCSLCGS+L
Sbjct: 1042 VDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSIL 1101
Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
TT+S Q R+ G +PP R PKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI
Sbjct: 1102 TTSSVQPPVRVCEIPG--MPPMRAPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 1159
Query: 363 KMTLNLTNGAEA 398
K+ L L+N + A
Sbjct: 1160 KLNLQLSNASGA 1171
>ref|XP_003609884.1| DNA-directed RNA polymerase [Medicago truncatula]
gi|355510939|gb|AES92081.1| DNA-directed RNA polymerase
[Medicago truncatula]
Length = 1341
Score = 191 bits (484), Expect = 2e-46
Identities = 95/135 (70%), Positives = 108/135 (80%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
VDQITRQP FGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCS+CGS+L
Sbjct: 1206 VDQITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSICGSML 1265
Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
+TT + KR VR+ +P R P+KVTCHAC+TSKGMETVAMPY+FRYLAAELAAMNI
Sbjct: 1266 STTFIEPQKRPVRDI-PGIPVRRAPRKVTCHACQTSKGMETVAMPYIFRYLAAELAAMNI 1324
Query: 363 KMTLNLTNGAEA*ET 407
KMTL L+NGA +T
Sbjct: 1325 KMTLKLSNGANVSDT 1339
>ref|XP_002297732.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550346693|gb|EEE82537.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1117
Score = 190 bits (482), Expect = 3e-46
Identities = 97/130 (74%), Positives = 107/130 (82%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
VDQITRQP FGEMERDSMLAHGAAYLLHDRLHTCSD+HIADVCS+CGS+L
Sbjct: 990 VDQITRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDYHIADVCSICGSIL 1049
Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
TT Q +RIVR+ G LPP + PKKV CHAC+TSKG+ETVAMPYVFRYLAAELAAMNI
Sbjct: 1050 -TTHYQPQRRIVRDIG-GLPPVKAPKKVVCHACQTSKGIETVAMPYVFRYLAAELAAMNI 1107
Query: 363 KMTLNLTNGA 392
KMTL+L +GA
Sbjct: 1108 KMTLHLNDGA 1117
>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
vesca subsp. vesca]
Length = 1169
Score = 188 bits (477), Expect = 1e-45
Identities = 94/132 (71%), Positives = 103/132 (78%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
VDQ+TRQP FGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCSLCGS+L
Sbjct: 1040 VDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSIL 1099
Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
TT+S Q + G +PP R PKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI
Sbjct: 1100 TTSSVQPQVPVREIPG--MPPMRAPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 1157
Query: 363 KMTLNLTNGAEA 398
K+ L L+N A
Sbjct: 1158 KLNLQLSNATGA 1169
>ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Capsella rubella]
gi|482575323|gb|EOA39510.1| hypothetical protein
CARUB_v10008127mg [Capsella rubella]
Length = 1171
Score = 185 bits (470), Expect = 8e-45
Identities = 90/128 (70%), Positives = 104/128 (81%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
VDQ+T QP FGEMERDS+LAHGA+YLLHDRLHT SDHHIADVCSLCGSLL
Sbjct: 1033 VDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGASYLLHDRLHTSSDHHIADVCSLCGSLL 1092
Query: 183 TTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 362
T++ A ++ + + KLPPGR PKKVTC++CKTSKGMETVAMPYVFRYLAAELA+MNI
Sbjct: 1093 TSSIANVQQKKLIQVTGKLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASMNI 1152
Query: 363 KMTLNLTN 386
KMTL L++
Sbjct: 1153 KMTLKLSD 1160
>gb|AAG10602.1|AC008030_2 Similar to DNA-directed RNA polymerase subunit [Arabidopsis thaliana]
Length = 1233
Score = 185 bits (469), Expect = 1e-44
Identities = 92/129 (71%), Positives = 106/129 (82%), Gaps = 1/129 (0%)
Frame = +3
Query: 3 VDQITRQPXXXXXXXXXXXFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLL 182
VDQ+T QP FGEMERDS+LAHGA+YLLHDRLHT SDHHIADVCSLCGSLL
Sbjct: 1100 VDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGASYLLHDRLHTSSDHHIADVCSLCGSLL 1159
Query: 183 TTTSAQT-HKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMN 359
T++ K++++E G KLPPGR PKKVTC++CKTSKGMETVAMPYVFRYLAAELA+MN
Sbjct: 1160 TSSVVNVQQKKLIQEIG-KLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASMN 1218
Query: 360 IKMTLNLTN 386
IKMTL L++
Sbjct: 1219 IKMTLQLSD 1227