BLASTX nr result

ID: Papaver25_contig00018912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00018912
         (793 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC08960.1| RNA polymerase II second largest subunit [Peperom...    51   6e-10
gb|AAW22886.1| RNA polymerase II second largest subunit [Isoetes...    49   2e-08
gb|AAY85216.1| RNA polymerase II second largest subunit [Hibbert...    53   5e-08
gb|AAY85204.1| RNA polymerase II second largest subunit [Dilleni...    53   5e-08
gb|AAY85208.1| RNA polymerase II second largest subunit [Euptele...    52   7e-08
gb|AAY85203.1| RNA polymerase II second largest subunit [Dicentr...    52   1e-07
gb|AAY89340.1| RNA polymerase II second largest subunit [Berberi...    51   2e-07
gb|AAY85190.1| RNA polymerase II second largest subunit [Aextoxi...    51   2e-07
gb|AAY85223.1| RNA polymerase II second largest subunit [Nelumbo...    51   2e-07
gb|AAY89339.1| RNA polymerase II second largest subunit [Berberi...    51   2e-07
gb|AAY85217.1| RNA polymerase II second largest subunit [Muehlen...    50   4e-07
gb|AFV74911.1| RNA polymerase II second largest subunit, partial...    55   5e-07
gb|AAY85200.1| RNA polymerase II second largest subunit [Coriari...    55   6e-07
gb|AAB94061.1| RPB140 [Magnolia virginiana]                            55   6e-07
emb|CAD89687.1| RNA polymerase II, second largest subunit [Ilex ...    55   6e-07
emb|CAD92460.1| RNA polymerase II [Escallonia sp. Oxelman 2340]        54   8e-07
emb|CAD89691.1| RNA polymerase II, second largest subunit [Escal...    54   8e-07
ref|XP_007214559.1| hypothetical protein PRUPE_ppa000425mg [Prun...    54   1e-06
gb|AAZ08462.1| RNA polymerase II second largest subunit [Platanu...    54   1e-06
gb|AAS86825.1| RNA polymerase II second largest subunit, partial...    54   1e-06

>gb|AAC08960.1| RNA polymerase II second largest subunit [Peperomia caperata]
          Length = 554

 Score = 51.2 bits (121), Expect(3) = 6e-10
 Identities = 37/98 (37%), Positives = 51/98 (52%)
 Frame = -2

Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
           KT P A+D  Q  AS   ++  H  + RHSES +  + ++                G+  
Sbjct: 366 KTSPIAQDESQGQASRYNRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 413

Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
            +  +RSV IP +  KFSSRHG+ GTVGMT  QED+ W
Sbjct: 414 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 451



 Score = 33.1 bits (74), Expect(3) = 6e-10
 Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = -3

Query: 395 ITPDIILNPHLFLLK-EIGQLTDCIMGRL 312
           ITPDII+N H    +  IGQL +CIMG++
Sbjct: 456 ITPDIIVNQHAIPSRMTIGQLIECIMGKV 484



 Score = 25.8 bits (55), Expect(3) = 6e-10
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 340 GSYDKLDDDGLAPPG 354


>gb|AAW22886.1| RNA polymerase II second largest subunit [Isoetes sp. JZ73]
          Length = 536

 Score = 48.5 bits (114), Expect(2) = 2e-08
 Identities = 22/42 (52%), Positives = 30/42 (71%)
 Frame = -2

Query: 534 GVGVDESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
           G+   ++ +RS+ IP +  KFSSRHG+ GTVGMT  QED+ W
Sbjct: 402 GLRFVKTRVRSIRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 443



 Score = 37.0 bits (84), Expect(2) = 2e-08
 Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
 Frame = -3

Query: 395 ITPDIILNPHLFLLK-EIGQLTDCIMGRL 312
           ITPDII+NPH    +  IGQL +CIMG++
Sbjct: 448 ITPDIIVNPHAIXSRMTIGQLIECIMGKV 476


>gb|AAY85216.1| RNA polymerase II second largest subunit [Hibbertia scandens]
          Length = 873

 Score = 52.8 bits (125), Expect(3) = 5e-08
 Identities = 37/98 (37%), Positives = 53/98 (54%)
 Frame = -2

Query: 702  KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
            KT P A+D+ Q V+S   ++  H  + RHSES +  + ++                G+  
Sbjct: 772  KTSPIAQDDAQGVSSRYTRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 819

Query: 522  DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
             +  +RSV IP +  KFSSRHG+ GTVGMT  QED+ W
Sbjct: 820  VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 857



 Score = 25.8 bits (55), Expect(3) = 5e-08
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 746 GSYDKLDDDGLAPPG 760



 Score = 24.6 bits (52), Expect(3) = 5e-08
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -3

Query: 395 ITPDIILNPH 366
           ITPDII+NPH
Sbjct: 862 ITPDIIVNPH 871


>gb|AAY85204.1| RNA polymerase II second largest subunit [Dillenia suffruticosa]
          Length = 868

 Score = 52.8 bits (125), Expect(3) = 5e-08
 Identities = 37/98 (37%), Positives = 53/98 (54%)
 Frame = -2

Query: 702  KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
            KT P A+D+ Q V+S   ++  H  + RHSES +  + ++                G+  
Sbjct: 767  KTSPIAQDDAQGVSSRYTRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 814

Query: 522  DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
             +  +RSV IP +  KFSSRHG+ GTVGMT  QED+ W
Sbjct: 815  VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 852



 Score = 25.8 bits (55), Expect(3) = 5e-08
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 741 GSYDKLDDDGLAPPG 755



 Score = 24.6 bits (52), Expect(3) = 5e-08
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -3

Query: 395 ITPDIILNPH 366
           ITPDII+NPH
Sbjct: 857 ITPDIIVNPH 866


>gb|AAY85208.1| RNA polymerase II second largest subunit [Euptelea polyandra]
          Length = 874

 Score = 52.4 bits (124), Expect(3) = 7e-08
 Identities = 36/98 (36%), Positives = 50/98 (51%)
 Frame = -2

Query: 702  KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
            KT P A++  Q  AS    +  H  + RHSES +  + ++                G+  
Sbjct: 772  KTTPIAQEESQGQASSRYTRRDHSTSLRHSESGMVDQVLLTTN-----------ADGLRF 820

Query: 522  DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
             +  +RSV IP +  KFSSRHG+ GTVGMT  QED+ W
Sbjct: 821  VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 858



 Score = 25.8 bits (55), Expect(3) = 7e-08
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 746 GSYDKLDDDGLAPPG 760



 Score = 24.6 bits (52), Expect(3) = 7e-08
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -3

Query: 395 ITPDIILNPH 366
           ITPDII+NPH
Sbjct: 863 ITPDIIVNPH 872


>gb|AAY85203.1| RNA polymerase II second largest subunit [Dicentra formosa]
          Length = 873

 Score = 51.6 bits (122), Expect(3) = 1e-07
 Identities = 37/98 (37%), Positives = 51/98 (52%)
 Frame = -2

Query: 702  KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
            KT P A+D  Q  AS   ++  H  + RHSES +  + ++                G+  
Sbjct: 772  KTTPIAQDESQGQASRYTRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 819

Query: 522  DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
             +  +RSV IP +  KFSSRHG+ GTVGMT  QED+ W
Sbjct: 820  VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 857



 Score = 25.8 bits (55), Expect(3) = 1e-07
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 746 GSYDKLDDDGLAPPG 760



 Score = 24.6 bits (52), Expect(3) = 1e-07
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -3

Query: 395 ITPDIILNPH 366
           ITPDII+NPH
Sbjct: 862 ITPDIIVNPH 871


>gb|AAY89340.1| RNA polymerase II second largest subunit [Berberidopsis beckleri]
          Length = 873

 Score = 50.8 bits (120), Expect(3) = 2e-07
 Identities = 36/98 (36%), Positives = 52/98 (53%)
 Frame = -2

Query: 702  KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
            KT P ++D+ Q  AS   ++  H  + RHSES +  + ++                G+  
Sbjct: 772  KTTPISQDDAQGQASRYTRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 819

Query: 522  DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
             +  +RSV IP +  KFSSRHG+ GTVGMT  QED+ W
Sbjct: 820  VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 857



 Score = 25.8 bits (55), Expect(3) = 2e-07
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 746 GSYDKLDDDGLAPPG 760



 Score = 24.6 bits (52), Expect(3) = 2e-07
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -3

Query: 395 ITPDIILNPH 366
           ITPDII+NPH
Sbjct: 862 ITPDIIVNPH 871


>gb|AAY85190.1| RNA polymerase II second largest subunit [Aextoxicon punctatum]
          Length = 873

 Score = 50.8 bits (120), Expect(3) = 2e-07
 Identities = 36/98 (36%), Positives = 52/98 (53%)
 Frame = -2

Query: 702  KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
            KT P ++D+ Q  AS   ++  H  + RHSES +  + ++                G+  
Sbjct: 772  KTTPISQDDAQGQASRYTRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 819

Query: 522  DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
             +  +RSV IP +  KFSSRHG+ GTVGMT  QED+ W
Sbjct: 820  VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 857



 Score = 25.8 bits (55), Expect(3) = 2e-07
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 746 GSYDKLDDDGLAPPG 760



 Score = 24.6 bits (52), Expect(3) = 2e-07
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -3

Query: 395 ITPDIILNPH 366
           ITPDII+NPH
Sbjct: 862 ITPDIIVNPH 871


>gb|AAY85223.1| RNA polymerase II second largest subunit [Nelumbo nucifera]
          Length = 865

 Score = 50.8 bits (120), Expect(3) = 2e-07
 Identities = 36/98 (36%), Positives = 52/98 (53%)
 Frame = -2

Query: 702  KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
            KT P A+D+ Q  +S   ++  H  + RHSES +  + ++                G+  
Sbjct: 764  KTTPIAQDDSQGQSSRYTRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 811

Query: 522  DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
             +  +RSV IP +  KFSSRHG+ GTVGMT  QED+ W
Sbjct: 812  VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 849



 Score = 25.8 bits (55), Expect(3) = 2e-07
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 738 GSYDKLDDDGLAPPG 752



 Score = 24.6 bits (52), Expect(3) = 2e-07
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -3

Query: 395 ITPDIILNPH 366
           ITPDII+NPH
Sbjct: 854 ITPDIIVNPH 863


>gb|AAY89339.1| RNA polymerase II second largest subunit [Berberidopsis corallina]
          Length = 853

 Score = 50.8 bits (120), Expect(3) = 2e-07
 Identities = 36/98 (36%), Positives = 52/98 (53%)
 Frame = -2

Query: 702  KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
            KT P ++D+ Q  AS   ++  H  + RHSES +  + ++                G+  
Sbjct: 752  KTTPISQDDAQGQASRYTRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 799

Query: 522  DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
             +  +RSV IP +  KFSSRHG+ GTVGMT  QED+ W
Sbjct: 800  VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 837



 Score = 25.8 bits (55), Expect(3) = 2e-07
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 726 GSYDKLDDDGLAPPG 740



 Score = 24.6 bits (52), Expect(3) = 2e-07
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -3

Query: 395 ITPDIILNPH 366
           ITPDII+NPH
Sbjct: 842 ITPDIIVNPH 851


>gb|AAY85217.1| RNA polymerase II second largest subunit [Muehlenbeckia platyclada]
          Length = 875

 Score = 49.7 bits (117), Expect(3) = 4e-07
 Identities = 35/98 (35%), Positives = 48/98 (48%)
 Frame = -2

Query: 702  KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
            KT P A D  Q   +    +  H  + RHSE+ I  + ++                G+  
Sbjct: 773  KTTPLAPDEAQGPNAARYTRRDHSISLRHSENGIVDQVLLTTN-----------ADGLRF 821

Query: 522  DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW 409
             +  +RSV IP +  KFSSRHG+ GTVGMT  QED+ W
Sbjct: 822  VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 859



 Score = 25.8 bits (55), Expect(3) = 4e-07
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 747 GSYDKLDDDGLAPPG 761



 Score = 24.6 bits (52), Expect(3) = 4e-07
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -3

Query: 395 ITPDIILNPH 366
           ITPDII+NPH
Sbjct: 864 ITPDIIVNPH 873


>gb|AFV74911.1| RNA polymerase II second largest subunit, partial [Loranthus kaoi]
          Length = 480

 Score = 54.7 bits (130), Expect(2) = 5e-07
 Identities = 41/115 (35%), Positives = 57/115 (49%)
 Frame = -2

Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
           KT P A+D  Q  AS   K+  H  + RHSE+ I  + ++                G+  
Sbjct: 296 KTSPIAQDESQGQASRFTKRD-HSTSLRHSETGIVDQVLLTTN-----------ADGLRF 343

Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW*RHRHHPGHHFEPTSIP 358
            +  +RSV IP +  KFSSRHG+ GT+GMT  QED+ W     +P     P +IP
Sbjct: 344 VKVRVRSVRIPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVEGINPDIIVNPHAIP 398



 Score = 26.2 bits (56), Expect(2) = 5e-07
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 270 GSYDKLDDDGLAPSG 284


>gb|AAY85200.1| RNA polymerase II second largest subunit [Coriaria sarmentosa]
          Length = 952

 Score = 54.7 bits (130), Expect(2) = 6e-07
 Identities = 40/115 (34%), Positives = 55/115 (47%)
 Frame = -2

Query: 702  KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
            KT P A+D  Q  A+    +  H  + RHSE+ I  + ++                G+  
Sbjct: 772  KTTPIAQDEAQGQAAARYTRSDHSISLRHSETGIVDQVLLTTN-----------ADGLRF 820

Query: 522  DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW*RHRHHPGHHFEPTSIP 358
             +  +RSV IP +  KFSSRHG+ GTVGMT  QED+ W      P     P +IP
Sbjct: 821  VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 875



 Score = 25.8 bits (55), Expect(2) = 6e-07
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 746 GSYDKLDDDGLAPPG 760


>gb|AAB94061.1| RPB140 [Magnolia virginiana]
          Length = 555

 Score = 54.7 bits (130), Expect(2) = 6e-07
 Identities = 42/116 (36%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
 Frame = -2

Query: 702 KTIPTARDNPQ-QVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVG 526
           KTIP A+D+ Q QV  +  +   H  + RHSES +  + ++                G+ 
Sbjct: 367 KTIPIAQDDVQGQVTRYTRRD--HSTSLRHSESGMVDQVLLTTN-----------ADGLR 413

Query: 525 VDESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW*RHRHHPGHHFEPTSIP 358
             +  +RSV IP +  KFSSRHG+ GTVGMT  QED+ W      P     P +IP
Sbjct: 414 FVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTPEGITPDIIVNPHAIP 469



 Score = 25.8 bits (55), Expect(2) = 6e-07
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 341 GSYDKLDDDGLAPPG 355


>emb|CAD89687.1| RNA polymerase II, second largest subunit [Ilex x meserveae]
          Length = 322

 Score = 54.7 bits (130), Expect(2) = 6e-07
 Identities = 42/115 (36%), Positives = 57/115 (49%)
 Frame = -2

Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
           KT P A+D+ Q  AS   K+  H  + RHSE+ I  + ++                G+  
Sbjct: 142 KTTPIAQDDAQGQASRYTKRD-HSTSLRHSETGIVDQVLLTTN-----------ADGLRF 189

Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW*RHRHHPGHHFEPTSIP 358
            +  +RSV IP +  KFSSRHG+ GTVGMT  QED+ W      P     P +IP
Sbjct: 190 VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGVTPDIIVNPHAIP 244



 Score = 25.8 bits (55), Expect(2) = 6e-07
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 116 GSYDKLDDDGLAPPG 130


>emb|CAD92460.1| RNA polymerase II [Escallonia sp. Oxelman 2340]
          Length = 543

 Score = 54.3 bits (129), Expect(2) = 8e-07
 Identities = 41/115 (35%), Positives = 57/115 (49%)
 Frame = -2

Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
           KT P A+D+ Q  AS   K+  H  + RHSE+ +  + ++                G+  
Sbjct: 355 KTTPIAQDDAQGQASRYSKRD-HSTSLRHSETGMVDQVLLTTN-----------ADGLRF 402

Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW*RHRHHPGHHFEPTSIP 358
            +  +RSV IP +  KFSSRHG+ GTVGMT  QED+ W      P     P +IP
Sbjct: 403 VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTAEGITPDIIVNPHAIP 457



 Score = 25.8 bits (55), Expect(2) = 8e-07
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 329 GSYDKLDDDGLAPPG 343


>emb|CAD89691.1| RNA polymerase II, second largest subunit [Escallonia sp. Oxelman
           2340]
          Length = 508

 Score = 54.3 bits (129), Expect(2) = 8e-07
 Identities = 41/115 (35%), Positives = 57/115 (49%)
 Frame = -2

Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
           KT P A+D+ Q  AS   K+  H  + RHSE+ +  + ++                G+  
Sbjct: 298 KTTPIAQDDAQGQASRYSKRD-HSTSLRHSETGMVDQVLLTTN-----------ADGLRF 345

Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW*RHRHHPGHHFEPTSIP 358
            +  +RSV IP +  KFSSRHG+ GTVGMT  QED+ W      P     P +IP
Sbjct: 346 VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTAEGITPDIIVNPHAIP 400



 Score = 25.8 bits (55), Expect(2) = 8e-07
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 272 GSYDKLDDDGLAPPG 286


>ref|XP_007214559.1| hypothetical protein PRUPE_ppa000425mg [Prunus persica]
            gi|462410424|gb|EMJ15758.1| hypothetical protein
            PRUPE_ppa000425mg [Prunus persica]
          Length = 1192

 Score = 53.9 bits (128), Expect(2) = 1e-06
 Identities = 40/115 (34%), Positives = 55/115 (47%)
 Frame = -2

Query: 702  KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
            KT P A+D  Q  A+    +  H  + RHSE+ I  + ++                G+  
Sbjct: 876  KTTPMAQDEAQGQAASRYTRRDHSISLRHSETGIVDQVLLTTN-----------ADGLRF 924

Query: 522  DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW*RHRHHPGHHFEPTSIP 358
             +  +RSV IP +  KFSSRHG+ GTVGMT  QED+ W      P     P +IP
Sbjct: 925  VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGVTPDIIVNPHAIP 979



 Score = 25.8 bits (55), Expect(2) = 1e-06
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 850 GSYDKLDDDGLAPPG 864


>gb|AAZ08462.1| RNA polymerase II second largest subunit [Platanus orientalis]
          Length = 923

 Score = 53.9 bits (128), Expect(2) = 1e-06
 Identities = 41/115 (35%), Positives = 57/115 (49%)
 Frame = -2

Query: 702  KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
            KT P A++ PQ  AS   ++  H  + RHSES +  + ++                G+  
Sbjct: 744  KTTPIAQEEPQGQASRYTRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 791

Query: 522  DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW*RHRHHPGHHFEPTSIP 358
             +  +RSV IP +  KFSSRHG+ GTVGMT  QED+ W      P     P +IP
Sbjct: 792  VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 846



 Score = 25.8 bits (55), Expect(2) = 1e-06
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 718 GSYDKLDDDGLAPPG 732


>gb|AAS86825.1| RNA polymerase II second largest subunit, partial [Platanus
           orientalis]
          Length = 536

 Score = 53.9 bits (128), Expect(2) = 1e-06
 Identities = 41/115 (35%), Positives = 57/115 (49%)
 Frame = -2

Query: 702 KTIPTARDNPQQVASFC*KQCVHGANTRHSESEIAFKYVVIHM**I*N*NN*C*WFGVGV 523
           KT P A++ PQ  AS   ++  H  + RHSES +  + ++                G+  
Sbjct: 357 KTTPIAQEEPQGQASRYTRRD-HSTSLRHSESGMVDQVLLTTN-----------ADGLRF 404

Query: 522 DESNIRSVGIP*VVFKFSSRHGKNGTVGMTCKQEDIQW*RHRHHPGHHFEPTSIP 358
            +  +RSV IP +  KFSSRHG+ GTVGMT  QED+ W      P     P +IP
Sbjct: 405 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 459



 Score = 25.8 bits (55), Expect(2) = 1e-06
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 778 GLTDKLDNDGLAPHG 734
           G  DKLD+DGLAP G
Sbjct: 331 GSYDKLDDDGLAPPG 345


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