BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00018650
         (1530 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29879.3| unnamed protein product [Vitis vinifera]              443   e-122
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   443   e-122
ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Popu...   422   e-115
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   421   e-115
ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prun...   409   e-111
ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobro...   400   e-109
ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobro...   400   e-109
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...   400   e-109
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...   397   e-108
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...   397   e-108
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas...   396   e-107
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...   394   e-107
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub...   387   e-105
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr...   387   e-105
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me...   387   e-105
ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I sub...   385   e-104
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   384   e-104
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   384   e-104
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab...   375   e-101
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps...   374   e-101

>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  443 bits (1140), Expect = e-122
 Identities = 244/500 (48%), Positives = 321/500 (64%), Gaps = 26/500 (5%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRLQEILM A+  I+TP+MTCPL+ G+++DDA+RLAAKLKKVTVADI E +EV++VPF+V
Sbjct: 1185 PRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTV 1244

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
               Q  +++KLK+K++ P  +PP+  I+LEDC +TL+ +FVRELED+I+NHL+++SK+SG
Sbjct: 1245 QDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISG 1304

Query: 362  ITNMGRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKRKE 541
            I N   +S ++              +                        LG+DAQKRK+
Sbjct: 1305 IKNFLPDSRSM------ASKETDEDASGDGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQ 1358

Query: 542  QATDEMDYGE-----DGMETETSLVENVDAEGSESEGDDVGNKENDQGTDGEPQILDAEE 706
            QA+DEMDYG+     D  E    L E +D    E E   + N E       E  I D ++
Sbjct: 1359 QASDEMDYGDSEGEPDEGEPSAGLTEEIDLVEDEVE---ISNNE-------EVGISDPKD 1408

Query: 707  EPKSVLASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLRFTDEPHI 886
            E   V  SKS   +   +               + DR   V+AKG  FEVH RFT+EPHI
Sbjct: 1409 EDSKV-PSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEPHI 1467

Query: 887  ILSKVVEKAAKNVYIKRSGNIERCSVIDYNRDA--------------------KLAALQT 1006
            +L+++ +KAA  VYI+ SG I+ C VID N+D                     KL ALQT
Sbjct: 1468 LLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKKRENIPGEEKKKLPALQT 1527

Query: 1007 AGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGIKVNIRH 1186
            AGVDF AFW M D+LD+ ++ SN++H +L T+GVEAARATII EV  VF+AYG+KVNIRH
Sbjct: 1528 AGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRH 1587

Query: 1187 LTLIADYMTHTGAIRPFSRH-GIASSTSPFSKMSFETAAKFIVDAAYHGEVDDLESPSAR 1363
            L+LIAD+MTH+G  RP +RH GIA S SPFSKM+FETA+KFIV+AA HG  D+LES SAR
Sbjct: 1588 LSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASAR 1647

Query: 1364 ICLGLPVKVGTGSFDLLQQV 1423
            ICLGLPVK+GTG FDL+Q++
Sbjct: 1648 ICLGLPVKMGTGCFDLMQKI 1667


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  443 bits (1140), Expect = e-122
 Identities = 244/500 (48%), Positives = 321/500 (64%), Gaps = 26/500 (5%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRLQEILM A+  I+TP+MTCPL+ G+++DDA+RLAAKLKKVTVADI E +EV++VPF+V
Sbjct: 1256 PRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTV 1315

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
               Q  +++KLK+K++ P  +PP+  I+LEDC +TL+ +FVRELED+I+NHL+++SK+SG
Sbjct: 1316 QDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISG 1375

Query: 362  ITNMGRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKRKE 541
            I N   +S ++              +                        LG+DAQKRK+
Sbjct: 1376 IKNFLPDSRSM------ASKETDEDASGDGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQ 1429

Query: 542  QATDEMDYGE-----DGMETETSLVENVDAEGSESEGDDVGNKENDQGTDGEPQILDAEE 706
            QA+DEMDYG+     D  E    L E +D    E E   + N E       E  I D ++
Sbjct: 1430 QASDEMDYGDSEGEPDEGEPSAGLTEEIDLVEDEVE---ISNNE-------EVGISDPKD 1479

Query: 707  EPKSVLASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLRFTDEPHI 886
            E   V  SKS   +   +               + DR   V+AKG  FEVH RFT+EPHI
Sbjct: 1480 EDSKV-PSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEPHI 1538

Query: 887  ILSKVVEKAAKNVYIKRSGNIERCSVIDYNRDA--------------------KLAALQT 1006
            +L+++ +KAA  VYI+ SG I+ C VID N+D                     KL ALQT
Sbjct: 1539 LLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKKRENIPGEEKKKLPALQT 1598

Query: 1007 AGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGIKVNIRH 1186
            AGVDF AFW M D+LD+ ++ SN++H +L T+GVEAARATII EV  VF+AYG+KVNIRH
Sbjct: 1599 AGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRH 1658

Query: 1187 LTLIADYMTHTGAIRPFSRH-GIASSTSPFSKMSFETAAKFIVDAAYHGEVDDLESPSAR 1363
            L+LIAD+MTH+G  RP +RH GIA S SPFSKM+FETA+KFIV+AA HG  D+LES SAR
Sbjct: 1659 LSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASAR 1718

Query: 1364 ICLGLPVKVGTGSFDLLQQV 1423
            ICLGLPVK+GTG FDL+Q++
Sbjct: 1719 ICLGLPVKMGTGCFDLMQKI 1738


>ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Populus trichocarpa]
            gi|550335519|gb|ERP58815.1| hypothetical protein
            POPTR_0006s05420g [Populus trichocarpa]
          Length = 1132

 Score =  422 bits (1086), Expect = e-115
 Identities = 237/518 (45%), Positives = 320/518 (61%), Gaps = 44/518 (8%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRLQEILM AS  I+TP+MTCPL +G+T++DA+RL+ KLKKVTVADI+E +EV+V+PF+V
Sbjct: 619  PRLQEILMTASADIKTPIMTCPLHEGRTKEDAERLSDKLKKVTVADIVESMEVSVMPFAV 678

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
                +  ++KLK+K++ P H+P + DI++E+  +TL+VLFVRELED+I+N+L+++SK+SG
Sbjct: 679  QNDDICRIYKLKMKLYTPAHYPQHADISVENWEETLEVLFVRELEDAIQNYLVLLSKISG 738

Query: 362  ITNMGRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKRKE 541
            I N  +ES +              S +  +                    LG+D QKRK+
Sbjct: 739  IKNFLKESHSGTPIEAEEDVSGNISREGENDDDSDDEEGEEADD------LGLDVQKRKQ 792

Query: 542  QATDEMDY--GEDGM--ETETSLVENVDAEGSESEGDDVGNKENDQGTD---------GE 682
            Q TDEMDY  G +G+  E E  L  +    GSES+ +    +     TD          +
Sbjct: 793  QVTDEMDYDDGSEGVLNEDEGDLSGSQAPSGSESDTEPADKESEISNTDMVDYDSEYFEK 852

Query: 683  PQILDAEEEPKSVLASKSSDKR----------EPGSXXXXXXXXXXXXXXXESDRVFFVE 832
            P  L    +PKS   +  S  +          E                  + DR  FVE
Sbjct: 853  PTHLGNYSKPKSRKKTSESSSQVEMHSKLKSTEKKKQKAKGKKVRSKLVKKDFDRSIFVE 912

Query: 833  AKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--------YNRDAK 988
            AKGL FE+HL+FT+EPHI+L+++ +K AK V I+  G ++RC V D        Y +D K
Sbjct: 913  AKGLHFEIHLKFTNEPHILLAEIAQKTAKKVCIQNPGKVQRCQVTDCKENQVIYYGKDPK 972

Query: 989  ------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATII 1132
                        + AL T GVDF  FW M D LD+ ++ SN +H +L+ YGVEAAR TII
Sbjct: 973  RRIDIEPGEKQKIPALHTIGVDFNTFWKMQDHLDVRYMYSNSIHGMLKAYGVEAARETII 1032

Query: 1133 NEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSR-HGIASSTSPFSKMSFETAAKFI 1309
             E+K VF++YGI VN RHL+LIADYMTHTG  RP SR  GI+ S SP SKMSFETA+KFI
Sbjct: 1033 REIKHVFNSYGISVNTRHLSLIADYMTHTGEYRPMSRIGGISESISPLSKMSFETASKFI 1092

Query: 1310 VDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 1423
            V+AA HGEVD+LE+PSAR+CLGLPVK+GTGSFDL+Q++
Sbjct: 1093 VEAALHGEVDNLEAPSARVCLGLPVKMGTGSFDLMQKL 1130


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  421 bits (1081), Expect = e-115
 Identities = 238/506 (47%), Positives = 318/506 (62%), Gaps = 32/506 (6%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRLQEILM AS  I+TP+MTCPL++G+T +DAD LA KL+KVTVADI+E +EV+VVPF++
Sbjct: 1186 PRLQEILMTASIDIKTPIMTCPLQEGRTNEDADHLADKLRKVTVADIVESMEVSVVPFAI 1245

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
                V  ++KLK+K++ P H+P Y +I++ED  +TL+V+F+RELED+I+NH+ ++S++SG
Sbjct: 1246 QDGGVCRIYKLKMKLYRPAHYPQYANISVEDWEETLEVVFLRELEDAIQNHMFLLSRISG 1305

Query: 362  ITNMGRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKRKE 541
            I +   ES +              S ++                      LG+DAQKRK 
Sbjct: 1306 IKDFLPESRSRASGEADEDVAGDMSHREER------DDDNDDDDGERADDLGLDAQKRKL 1359

Query: 542  QATDEMDYGEDGMETETSLVENVDAE---GSESE---GDDVGNKENDQGTDGE-----PQ 688
            QATDEMDY +DG E E +  E+  +E   G ESE   GD+     ND   D E     P 
Sbjct: 1360 QATDEMDY-DDGFEEELNEGESTASEEESGFESEIDQGDNETEISNDVMLDNEASETLPL 1418

Query: 689  ILDAEEEPKSVLASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLRF 868
               ++ + K   A   S   +                  + DR  FVEA+ + FEVH +F
Sbjct: 1419 RKPSKPKSKKKAAESPSHGEKSKDKKKKPKAKRKSRISKDFDRAIFVEARKMHFEVHFKF 1478

Query: 869  TDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--------YNRD------------AK 988
            T+EPHI+L+++ +K AK VYI+  G IE+C V D        Y +D             K
Sbjct: 1479 TNEPHILLAEIAQKTAKKVYIQNPGKIEQCRVTDCKESQVIYYGKDPKERVDLKPDVKEK 1538

Query: 989  LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGI 1168
            + AL   GVDF  FW M D LD+ +I SN++H +L+TYGVEAAR TII E+  VF +YGI
Sbjct: 1539 VPALHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKTYGVEAARETIIREINHVFKSYGI 1598

Query: 1169 KVNIRHLTLIADYMTHTGAIRPFSR-HGIASSTSPFSKMSFETAAKFIVDAAYHGEVDDL 1345
             V+ RHL+LIAD+MTHTG  RP SR  GIA S SPFSKMSFETA+KFIV+AA HGE+D+L
Sbjct: 1599 AVSNRHLSLIADFMTHTGGYRPMSRMGGIAESISPFSKMSFETASKFIVEAALHGEIDNL 1658

Query: 1346 ESPSARICLGLPVKVGTGSFDLLQQV 1423
            E+PSARICLGLPVK+GTGSFDL+Q++
Sbjct: 1659 ETPSARICLGLPVKMGTGSFDLMQKL 1684


>ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
            gi|462398594|gb|EMJ04262.1| hypothetical protein
            PRUPE_ppa000153mg [Prunus persica]
          Length = 1612

 Score =  409 bits (1052), Expect = e-111
 Identities = 235/506 (46%), Positives = 315/506 (62%), Gaps = 32/506 (6%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRLQEILM A+  I+TPVMTCPL+KG+++++A  LA KLKK+TVADIIE ++V  VPF +
Sbjct: 1107 PRLQEILMTAANDIKTPVMTCPLQKGRSKEEAQELADKLKKITVADIIESMKVTFVPFFI 1166

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
               Q   ++KL++ +  PEH    ++ + ED  + L+++FVRELED+I+NH++++SK+SG
Sbjct: 1167 QDGQTCRIYKLEMTLHVPEHLRTIIEYSSEDWEEILEIVFVRELEDAIQNHILLLSKISG 1226

Query: 362  ITNMGRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKRKE 541
            I N   +S+               S ++                       G+DA KRK 
Sbjct: 1227 IKNFTPDSQPKASNETDENLPEKRSQREEE--DDDNGGADDGEHGEGVEDFGLDAHKRKL 1284

Query: 542  QATDEMDYGEDGMETETSLVENVD-AEGSESEGDDVGNKENDQGTDGEPQILDAEEE-PK 715
            QATDEMDY EDG + E   V   D ++G ESE D+  N E + G DGE  ++DA +E P 
Sbjct: 1285 QATDEMDY-EDGCDDE---VREADLSDGDESEIDEEEN-EVEIGKDGEIGVIDANDEMPG 1339

Query: 716  SVLAS-------KSSDKR-EPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLRFT 871
            S L         KS +K+ + GS               E+DR  FV AKG  FEVH RF 
Sbjct: 1340 SPLEEAGDLAKPKSKEKKTKSGSQIRKKRKVRAEMVKKETDRAIFVSAKGFHFEVHFRFA 1399

Query: 872  D-EPHIILSKVVEKAAKNVYIKRSGNIERC--------SVIDYNRD------------AK 988
            D EPHI+LS++ +K A+ VYI+RSG +  C         V+ + +D             +
Sbjct: 1400 DNEPHILLSQIAQKTAQKVYIQRSGKVADCKQITCDENQVLCFGKDPENKQSFSSKEKKE 1459

Query: 989  LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGI 1168
            + ALQT G+DFG FW + D LD+ +I SN++H +L TYGVEAAR TII E+  VF +YGI
Sbjct: 1460 MPALQTTGIDFGTFWQLQDVLDVRYIYSNNIHAMLNTYGVEAARETIIREINNVFKSYGI 1519

Query: 1169 KVNIRHLTLIADYMTHTGAIRPFSRH-GIASSTSPFSKMSFETAAKFIVDAAYHGEVDDL 1345
             VNIRHLTLIAD+MTH G  RP +R  GI  S SPF+KM+FETA+KFIV+AAYHG+VD L
Sbjct: 1520 SVNIRHLTLIADFMTHAGGYRPLNRFGGIVESISPFNKMTFETASKFIVEAAYHGQVDRL 1579

Query: 1346 ESPSARICLGLPVKVGTGSFDLLQQV 1423
            E+PSARICLGLPV VGTG FDL+ ++
Sbjct: 1580 ETPSARICLGLPVNVGTGCFDLMHKM 1605


>ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
            gi|508717461|gb|EOY09358.1| Nuclear RNA polymerase A1
            isoform 4 [Theobroma cacao]
          Length = 1397

 Score =  400 bits (1028), Expect = e-109
 Identities = 230/496 (46%), Positives = 309/496 (62%), Gaps = 22/496 (4%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRLQEILM AS  I+TPVMTCPL KGKT++DA  LA K+KK+TVADI+E +EV+V PF+V
Sbjct: 905  PRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPFAV 964

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
                + +++KLK+ +  P+ +    DIT++DC   L V+F+RELED+I+NHL+++SK+SG
Sbjct: 965  DNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISG 1024

Query: 362  ITNMGRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKRKE 541
            I     +S+  N             S+++                     LG+DAQK+K+
Sbjct: 1025 IKKFMPDSQR-NASNEMDEDVSEGRSRET--KNDDDDDDDDADDEERAEDLGLDAQKQKQ 1081

Query: 542  QATDEMDYGEDG--METETSLVENVDAEGSESEGDDVGNKENDQGTD-GEPQILDAEEEP 712
            Q TDEMDY +D    + E + +  +++E   SE +    + N  G+D G+ +I  ++  P
Sbjct: 1082 QTTDEMDYEDDSEVEQNEGASLAALESEIDMSEDETGTIQINMIGSDNGKDEI--SQSSP 1139

Query: 713  KSVLASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLRFTDEPHIIL 892
                 S    + E                  ESDR  F   +GL FEVH +  +EPHI+L
Sbjct: 1140 NLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILL 1199

Query: 893  SKVVEKAAKNVYIKRSGNIERCSVID--------YNRD----------AKLAALQTAGVD 1018
            +++ EK AK VYI+  G I++C V D        Y  D           K+ AL T GVD
Sbjct: 1200 AQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEKIQALHTTGVD 1259

Query: 1019 FGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGIKVNIRHLTLI 1198
            FGAFW M D +D+ ++ SN +H +L TYGVEAAR TII E+  VF +YGI VNIRHLTLI
Sbjct: 1260 FGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLI 1319

Query: 1199 ADYMTHTGAIRPFSR-HGIASSTSPFSKMSFETAAKFIVDAAYHGEVDDLESPSARICLG 1375
            AD+MTH+G  RP SR  GIA S SPFSKMSFETA+KFIV+AA HG VD+LE+PS+RICLG
Sbjct: 1320 ADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLG 1379

Query: 1376 LPVKVGTGSFDLLQQV 1423
            LPVK+GTGSFDL+Q+V
Sbjct: 1380 LPVKMGTGSFDLMQKV 1395


>ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
            gi|508717460|gb|EOY09357.1| Nuclear RNA polymerase A1
            isoform 3 [Theobroma cacao]
          Length = 1400

 Score =  400 bits (1028), Expect = e-109
 Identities = 230/496 (46%), Positives = 309/496 (62%), Gaps = 22/496 (4%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRLQEILM AS  I+TPVMTCPL KGKT++DA  LA K+KK+TVADI+E +EV+V PF+V
Sbjct: 908  PRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPFAV 967

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
                + +++KLK+ +  P+ +    DIT++DC   L V+F+RELED+I+NHL+++SK+SG
Sbjct: 968  DNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISG 1027

Query: 362  ITNMGRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKRKE 541
            I     +S+  N             S+++                     LG+DAQK+K+
Sbjct: 1028 IKKFMPDSQR-NASNEMDEDVSEGRSRET--KNDDDDDDDDADDEERAEDLGLDAQKQKQ 1084

Query: 542  QATDEMDYGEDG--METETSLVENVDAEGSESEGDDVGNKENDQGTD-GEPQILDAEEEP 712
            Q TDEMDY +D    + E + +  +++E   SE +    + N  G+D G+ +I  ++  P
Sbjct: 1085 QTTDEMDYEDDSEVEQNEGASLAALESEIDMSEDETGTIQINMIGSDNGKDEI--SQSSP 1142

Query: 713  KSVLASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLRFTDEPHIIL 892
                 S    + E                  ESDR  F   +GL FEVH +  +EPHI+L
Sbjct: 1143 NLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILL 1202

Query: 893  SKVVEKAAKNVYIKRSGNIERCSVID--------YNRD----------AKLAALQTAGVD 1018
            +++ EK AK VYI+  G I++C V D        Y  D           K+ AL T GVD
Sbjct: 1203 AQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEKIQALHTTGVD 1262

Query: 1019 FGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGIKVNIRHLTLI 1198
            FGAFW M D +D+ ++ SN +H +L TYGVEAAR TII E+  VF +YGI VNIRHLTLI
Sbjct: 1263 FGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLI 1322

Query: 1199 ADYMTHTGAIRPFSR-HGIASSTSPFSKMSFETAAKFIVDAAYHGEVDDLESPSARICLG 1375
            AD+MTH+G  RP SR  GIA S SPFSKMSFETA+KFIV+AA HG VD+LE+PS+RICLG
Sbjct: 1323 ADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLG 1382

Query: 1376 LPVKVGTGSFDLLQQV 1423
            LPVK+GTGSFDL+Q+V
Sbjct: 1383 LPVKMGTGSFDLMQKV 1398


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
            gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
            putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  400 bits (1028), Expect = e-109
 Identities = 230/496 (46%), Positives = 309/496 (62%), Gaps = 22/496 (4%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRLQEILM AS  I+TPVMTCPL KGKT++DA  LA K+KK+TVADI+E +EV+V PF+V
Sbjct: 1197 PRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPFAV 1256

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
                + +++KLK+ +  P+ +    DIT++DC   L V+F+RELED+I+NHL+++SK+SG
Sbjct: 1257 DNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISG 1316

Query: 362  ITNMGRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKRKE 541
            I     +S+  N             S+++                     LG+DAQK+K+
Sbjct: 1317 IKKFMPDSQR-NASNEMDEDVSEGRSRET--KNDDDDDDDDADDEERAEDLGLDAQKQKQ 1373

Query: 542  QATDEMDYGEDG--METETSLVENVDAEGSESEGDDVGNKENDQGTD-GEPQILDAEEEP 712
            Q TDEMDY +D    + E + +  +++E   SE +    + N  G+D G+ +I  ++  P
Sbjct: 1374 QTTDEMDYEDDSEVEQNEGASLAALESEIDMSEDETGTIQINMIGSDNGKDEI--SQSSP 1431

Query: 713  KSVLASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLRFTDEPHIIL 892
                 S    + E                  ESDR  F   +GL FEVH +  +EPHI+L
Sbjct: 1432 NLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILL 1491

Query: 893  SKVVEKAAKNVYIKRSGNIERCSVID--------YNRD----------AKLAALQTAGVD 1018
            +++ EK AK VYI+  G I++C V D        Y  D           K+ AL T GVD
Sbjct: 1492 AQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEKIQALHTTGVD 1551

Query: 1019 FGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGIKVNIRHLTLI 1198
            FGAFW M D +D+ ++ SN +H +L TYGVEAAR TII E+  VF +YGI VNIRHLTLI
Sbjct: 1552 FGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLI 1611

Query: 1199 ADYMTHTGAIRPFSR-HGIASSTSPFSKMSFETAAKFIVDAAYHGEVDDLESPSARICLG 1375
            AD+MTH+G  RP SR  GIA S SPFSKMSFETA+KFIV+AA HG VD+LE+PS+RICLG
Sbjct: 1612 ADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLG 1671

Query: 1376 LPVKVGTGSFDLLQQV 1423
            LPVK+GTGSFDL+Q+V
Sbjct: 1672 LPVKMGTGSFDLMQKV 1687


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score =  397 bits (1020), Expect = e-108
 Identities = 215/495 (43%), Positives = 303/495 (61%), Gaps = 21/495 (4%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRLQEILM ASE I+TP++TCP    ++++DA  L AK+KK+TVAD+IE +EV ++P S+
Sbjct: 1194 PRLQEILMTASEAIKTPILTCPFLGWQSKNDAQSLLAKVKKITVADMIESMEVKLLPLSI 1253

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
            Y  QV+ ++KL +K+   +       ++ EDC  TL  +F+RELED+IE+HL ++SK++G
Sbjct: 1254 YNHQVSQLYKLTVKLKKHDF------VSSEDCEYTLKFVFLRELEDAIESHLALLSKING 1307

Query: 362  ITNMGRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKRKE 541
            I N    SE+V+            + + +                     L  DAQKRK+
Sbjct: 1308 IQNFKTSSESVDSDE---------TEENASSTRHEEEMLDDEDEDERTEDLSSDAQKRKQ 1358

Query: 542  QATDEMDYGEDGMETETSLVENVDAEGSESEGD-DVGNKENDQGTDGEPQILDAEEEPKS 718
            Q TDEMDY +D  E E      ++ E SE   + D G++E       E Q+   +     
Sbjct: 1359 QTTDEMDYDDDENEDEAETTAEIEDEKSEQTDEIDNGDEEEIGNRGNEEQMSKLQSTEDD 1418

Query: 719  VLASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLRFTDEPHIILSK 898
            +  +KSS  +                   +SDR  FV+ +GL FEVH RF +EPHI+L++
Sbjct: 1419 ISNTKSSKSKTKTKTTVKQNKKKERRSKKDSDRCVFVDVEGLHFEVHFRFVNEPHILLAQ 1478

Query: 899  VVEKAAKNVYIKRSGNIERCSVIDY-------------------NRDAKLAALQTAGVDF 1021
            V +K AK VYIK SG I++C ++ Y                   + D+   AL+ AGVDF
Sbjct: 1479 VAQKTAKKVYIKNSGKIDQCRMVKYEVTENTVMWDEYQTKQQSQDSDSAYWALKAAGVDF 1538

Query: 1022 GAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGIKVNIRHLTLIA 1201
            G FW+M DDLD+  I +N++  +L TYGVEAARA+I+ EVK VF  YG++++ RHL+LIA
Sbjct: 1539 GTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASILREVKTVFGIYGVEIDFRHLSLIA 1598

Query: 1202 DYMTHTGAIRPFSRHG-IASSTSPFSKMSFETAAKFIVDAAYHGEVDDLESPSARICLGL 1378
            D+MTHTG  +P SRHG I+ S SPF KMSFETA+KFIV+AA HG  D+LE+PS+RICLGL
Sbjct: 1599 DFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVEAAAHGLTDNLETPSSRICLGL 1658

Query: 1379 PVKVGTGSFDLLQQV 1423
            PVK+GTG FD++Q++
Sbjct: 1659 PVKMGTGCFDIMQKL 1673


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score =  397 bits (1019), Expect = e-108
 Identities = 230/497 (46%), Positives = 301/497 (60%), Gaps = 23/497 (4%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRLQEILM A+  I+TP MTCPLR  K+  DA  LA KLKK+TVADII+ ++V+VVP +V
Sbjct: 1163 PRLQEILMAAARDIKTPFMTCPLRHDKSMKDAICLADKLKKITVADIIKSMKVSVVPVTV 1222

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
               QV +++KL +K++  + +P Y DITL+D  +TL V FVRELED+I+NH+ ++SK+SG
Sbjct: 1223 LGGQVCSIYKLVMKLYKSKQYPEYTDITLDDWEETLRVNFVRELEDAIQNHMTLLSKISG 1282

Query: 362  ITNMGRESEA-VNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKRK 538
            I     + ++  +            S K+                      LG DAQKRK
Sbjct: 1283 IKKFKTDPQSNYSNSSEDAHSNGSESEKKGQNNDDDDEDGGGVEDTEGYEDLGSDAQKRK 1342

Query: 539  EQATDEMDYGEDGMETETSLVENVDAEGSESEGDDVGNKENDQGTDGEPQILDAEEEPKS 718
             Q TDE+DY EDG E ET   E  +    + +G DV   EN             E+  KS
Sbjct: 1343 LQGTDEVDY-EDGPEEETHDGELSEEIEGDEDGSDVDANENYNNVTDANNSEGLEKPSKS 1401

Query: 719  -VLASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLRFTDEPHIILS 895
              +  K + KRE                  + DR  FVEAKG  FE+H RFT EPHI+L+
Sbjct: 1402 KTIDEKQNLKRE---------KKKSEPTTKKYDRAIFVEAKGKHFEIHFRFTGEPHILLT 1452

Query: 896  KVVEKAAKNVYIKRSGNIERC--------SVIDYNRDAK------------LAALQTAGV 1015
            ++ ++ AK V I+  G +  C         VI Y +D +            + ALQT+GV
Sbjct: 1453 QIAQRTAKKVCIQNFGKVGECKAITCKESGVIYYGKDGRKRIEISASEKEQIPALQTSGV 1512

Query: 1016 DFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGIKVNIRHLTL 1195
             F  FW++ DDLD+ +I SN++H +L  YGVEAAR TII EV+ VF +YGI VNIRHLTL
Sbjct: 1513 HFKTFWELEDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLTL 1572

Query: 1196 IADYMTHTGAIRPFSRHG-IASSTSPFSKMSFETAAKFIVDAAYHGEVDDLESPSARICL 1372
            IAD+MTHTG+ RP +R G IA STSPF KM FETA  FIV+AAYHG+VD+LE+PSARICL
Sbjct: 1573 IADFMTHTGSYRPMNRTGSIADSTSPFIKMCFETAGNFIVEAAYHGQVDNLETPSARICL 1632

Query: 1373 GLPVKVGTGSFDLLQQV 1423
            GLPVK+GTG  DL+Q++
Sbjct: 1633 GLPVKMGTGCHDLIQKL 1649


>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
            gi|561018822|gb|ESW17626.1| hypothetical protein
            PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score =  396 bits (1018), Expect = e-107
 Identities = 229/495 (46%), Positives = 309/495 (62%), Gaps = 21/495 (4%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRLQEI+M A+  I+TP MTCPLR  K+ ++A  LA KLKK+TVADII+ ++V+VVP SV
Sbjct: 1157 PRLQEIVMAAARDIKTPFMTCPLRSNKSMEEAICLADKLKKITVADIIKSMKVSVVPVSV 1216

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
               QV +++KL +K++ P+ +P Y DITLED   TL + FVRELED+IENH+ ++SK+SG
Sbjct: 1217 LGGQVCSIYKLVMKLYKPKQYPKYSDITLEDWEDTLRISFVRELEDAIENHMALLSKISG 1276

Query: 362  ITNMGRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKRKE 541
            I     + ++ +             S+                       LG DAQKRK 
Sbjct: 1277 IKKFKTDPQS-HSNSSEDAHGNGSESETKGKSNDDDDDDDVVEDTEGYEDLGSDAQKRKR 1335

Query: 542  QATDEMDYGEDGMETETSLVENVDAEGSESEGDDVGNKENDQGTDGEPQILDAEEEPKSV 721
            Q TDE+DY EDG E ET   + V +E  E++ D+V +      +D E   LD   E KS+
Sbjct: 1336 QGTDEVDY-EDGPEEETH--DGVLSEEIENDEDNVDDNMTLDASDSEG--LDELSESKSI 1390

Query: 722  LASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLRFTDEPHIILSKV 901
               K S KRE                  + DR  FV+AKG+ F++H +FT EP I+L+++
Sbjct: 1391 F-EKDSLKRE---------KKKSRPTTRKYDRAVFVKAKGMHFQIHFKFTGEPDILLAEI 1440

Query: 902  VEKAAKNVYIKRSGNIERC--------SVIDYNRDA------------KLAALQTAGVDF 1021
              ++AK V I+ SG +  C         V+ Y  D+            K+ ALQT+GV F
Sbjct: 1441 ALRSAKKVCIQNSGRVGECKAVTCKESGVMYYGEDSRKRDDIPASVKEKIPALQTSGVHF 1500

Query: 1022 GAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGIKVNIRHLTLIA 1201
              FW++ DDLD+ +I SN++H +L  YGVEAAR TII EV+ VF +YGI VNIRHLTLIA
Sbjct: 1501 KTFWELQDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIA 1560

Query: 1202 DYMTHTGAIRPFSRHG-IASSTSPFSKMSFETAAKFIVDAAYHGEVDDLESPSARICLGL 1378
            D+MTH+G  RP +R+G IA  TSPF KM FETA+KFIV+AAYHG+VD+LE+PS+RICLGL
Sbjct: 1561 DFMTHSGGYRPMNRNGSIADCTSPFIKMCFETASKFIVEAAYHGQVDNLETPSSRICLGL 1620

Query: 1379 PVKVGTGSFDLLQQV 1423
            PVK+GTG  DL+Q++
Sbjct: 1621 PVKMGTGCHDLIQKL 1635


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            lycopersicum]
          Length = 1677

 Score =  394 bits (1013), Expect = e-107
 Identities = 218/500 (43%), Positives = 304/500 (60%), Gaps = 26/500 (5%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRLQEILM ASE I+TP+MTCP    K+++DA  L AK+KK+TVAD+IE +EV ++P S+
Sbjct: 1194 PRLQEILMTASEAIKTPIMTCPFLGWKSKNDAQSLLAKVKKITVADMIESMEVKLLPLSI 1253

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
            Y  QV+ ++KL +K+   +       ++ EDC  TL  +F+RELED+IE+HL ++SK++G
Sbjct: 1254 YNHQVSQLYKLTVKLKKHDF------VSSEDCEYTLKFVFLRELEDAIESHLALLSKING 1307

Query: 362  ITNMGRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKRKE 541
            I N    SE+V+             +  S                     L  DAQKRK+
Sbjct: 1308 IQNFKTSSESVDSDETE-------ENASSTRREEEMLDDDDDDEDERTEDLSSDAQKRKQ 1360

Query: 542  QATDEMDYGEDGMETETSLVENVDAEGSESEG-DDVGNKENDQGTDG-----EPQILDAE 703
            Q TDEMDY +D  E E       + E  +SE  D++ N + ++  D        ++   E
Sbjct: 1361 QTTDEMDYDDDEDEAEAEAEATAEIEDEKSEQTDEIDNGDEEENGDRGNEEHTSKLQSTE 1420

Query: 704  EEPKSVLASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLRFTDEPH 883
            E+  +   SKS  K                    +SDR  FV+ +GL FEVH RF +EPH
Sbjct: 1421 EDISNTKTSKSKTKTT-----VKQKKKKERRSKKDSDRCVFVDVEGLHFEVHFRFVNEPH 1475

Query: 884  IILSKVVEKAAKNVYIKRSGNIERCSVIDY-------------------NRDAKLAALQT 1006
            I+L++V +K AK VY+K SG I++C ++ Y                   + D+   AL+ 
Sbjct: 1476 ILLAQVAQKTAKKVYVKNSGKIDQCRMVKYEVTENTVMWDENQTKQQRQDSDSAYWALKA 1535

Query: 1007 AGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGIKVNIRH 1186
            AGVDFG FW+M DDLD+  I +N++  +L TYGVEAARA+I+ EVK VF  YG++++ RH
Sbjct: 1536 AGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASILREVKTVFGIYGVEIDFRH 1595

Query: 1187 LTLIADYMTHTGAIRPFSRHG-IASSTSPFSKMSFETAAKFIVDAAYHGEVDDLESPSAR 1363
            L+LIAD+MTHTG  +P SRHG I+ S SPF KMSFETA+KFIV+AA HG  D+LE+PS+R
Sbjct: 1596 LSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVEAAAHGLTDNLETPSSR 1655

Query: 1364 ICLGLPVKVGTGSFDLLQQV 1423
            ICLGLPVK+GTG FD++Q++
Sbjct: 1656 ICLGLPVKMGTGCFDIMQEL 1675


>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
            sinensis]
          Length = 1715

 Score =  387 bits (993), Expect = e-105
 Identities = 227/507 (44%), Positives = 309/507 (60%), Gaps = 33/507 (6%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRLQEIL  AS+ I+TPV+TCPL  GKT DDA RLA KLKK+TVADI++KI V V  F+ 
Sbjct: 1220 PRLQEILTIASKDIKTPVITCPLLVGKTEDDAKRLADKLKKITVADIVKKISVKVRAFTS 1279

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
            +  Q  +V+ L ++++ P+++P Y DITLED  + L+V+FVRELED+I+NHL+++SK++G
Sbjct: 1280 HDGQACSVYVLTMELYKPKNYPTYTDITLEDWEEILEVVFVRELEDTIQNHLLLLSKING 1339

Query: 362  ITNM--GRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKR 535
            I N+  G   +A N                +                     LG+DA K+
Sbjct: 1340 IKNVASGLTQKASNETDQ--------DGSGNVSQCRGDDDDADDADGEEAEDLGMDAHKQ 1391

Query: 536  KEQATDEMDYGEDGMETETSLVENVDAEGSESEGDDVGNK----------ENDQGTDGEP 685
            K++ATDE DY EDG E E +  + V A G  SE D   ++          E+D+ T+   
Sbjct: 1392 KQRATDEKDY-EDGSEEEMN--DGVSAAGFGSEIDQAESEIDDDQAETEIEDDRATNEIE 1448

Query: 686  QILDAEEEPKSVLASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLR 865
               D   E       KSS K+                   ++DR  +V A+G+ FE H +
Sbjct: 1449 TSQDQASENLKPFTPKSSKKKSKSKSKRKKARAKLVKK--DTDRAIYVAARGMHFEAHFK 1506

Query: 866  FTDEPHIILSKVVEKAAKNVYIKRSGNIERCSV--------IDYNRDAK----------- 988
            F +EP+I+L+++    AK VYI+ SG I++C V        I Y +D K           
Sbjct: 1507 FINEPNILLAQIARHVAKKVYIQSSGKIDQCQVTNCKESQVIYYGKDPKTREDIKPEEKE 1566

Query: 989  -LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYG 1165
             + AL T GVDF AFW + D +D+ +I SN++  +L TYGVEAAR TII E+K VF +YG
Sbjct: 1567 KVQALHTTGVDFHAFWRLQDFIDVRYIYSNNIQAMLETYGVEAARETIIREIKHVFGSYG 1626

Query: 1166 IKVNIRHLTLIADYMTHTGAIRPFSR-HGIASSTSPFSKMSFETAAKFIVDAAYHGEVDD 1342
            I VN RHL+LIAD+MTH+G  RP SR  GIA S SPFSKM+FETA+KFIV+AA +G+VD 
Sbjct: 1627 ISVNTRHLSLIADFMTHSGGYRPMSRLGGIAESVSPFSKMTFETASKFIVEAASYGQVDK 1686

Query: 1343 LESPSARICLGLPVKVGTGSFDLLQQV 1423
            L++PSARICLGLPVK+GTGSFDL+Q++
Sbjct: 1687 LDTPSARICLGLPVKMGTGSFDLMQKL 1713


>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
            gi|557523327|gb|ESR34694.1| hypothetical protein
            CICLE_v10004132mg [Citrus clementina]
          Length = 1715

 Score =  387 bits (993), Expect = e-105
 Identities = 227/507 (44%), Positives = 308/507 (60%), Gaps = 33/507 (6%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRLQEIL  AS+ I+TPV+TCPL  GKT DDA RLA KLKK+TVADI++KI V V  F+ 
Sbjct: 1220 PRLQEILTIASKDIKTPVITCPLLVGKTEDDAKRLADKLKKITVADIVKKISVKVRAFTS 1279

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
            +  Q  TV+ L ++++ P+++P Y DITLED  + L+V+FVRELED+I+NHL+++SK++G
Sbjct: 1280 HDGQACTVYVLTMELYKPKNYPTYTDITLEDWEEILEVVFVRELEDTIQNHLLLLSKING 1339

Query: 362  ITNM--GRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKR 535
            I N+  G   +A N                +                     LG+DA K+
Sbjct: 1340 IKNVASGLTQKASNETDQ--------EGSGNVSQCRGDDDDADDADGEEAEDLGMDAHKQ 1391

Query: 536  KEQATDEMDYGEDGMETETSLVENVDAEGSESEGDDVGNK----------ENDQGTDGEP 685
            K++ATDE DY EDG E E +  + V A G  SE D   ++          E+D+ T+   
Sbjct: 1392 KQRATDEKDY-EDGSEGEMN--DGVSAAGFGSEIDQAESEIDDDQAETEIEDDRATNEIE 1448

Query: 686  QILDAEEEPKSVLASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLR 865
               D   E       KSS K+                   ++DR  +V A+G+ FE H +
Sbjct: 1449 NSQDQASENLKPFTPKSSKKKSKSKTKRKKARAKLVKK--DTDRAIYVAARGMHFEAHFK 1506

Query: 866  FTDEPHIILSKVVEKAAKNVYIKRSGNIERCSV--------IDYNRDAK----------- 988
            F +EP+I+L+++    AK VYI+ SG I++C V        I Y +D K           
Sbjct: 1507 FINEPNILLAQIARHVAKKVYIQSSGKIDQCQVTNCKESQVIYYGKDPKKREDIKPEEKE 1566

Query: 989  -LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYG 1165
             + AL T GVDF AFW + D +D+ +I SN++  +L TYGVEAAR TII E+K VF +YG
Sbjct: 1567 KVQALHTTGVDFHAFWQLQDFIDVRYIYSNNIQAMLETYGVEAARETIIREIKHVFGSYG 1626

Query: 1166 IKVNIRHLTLIADYMTHTGAIRPFSR-HGIASSTSPFSKMSFETAAKFIVDAAYHGEVDD 1342
            I VN RHL+LIAD+MTH+G  RP SR  GIA S SPFSKM+FE A+KFIV+AA +G+VD 
Sbjct: 1627 ISVNTRHLSLIADFMTHSGGYRPMSRLGGIAESVSPFSKMTFEIASKFIVEAASYGQVDK 1686

Query: 1343 LESPSARICLGLPVKVGTGSFDLLQQV 1423
            L++PSARICLGLPVK+GTGSFDL+Q++
Sbjct: 1687 LDTPSARICLGLPVKMGTGSFDLMQKL 1713


>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1628

 Score =  387 bits (993), Expect = e-105
 Identities = 217/501 (43%), Positives = 313/501 (62%), Gaps = 27/501 (5%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRL EI++ AS+ I+TP MTCPLR  K+ +DA RLA K+KK+TVADIIE ++V+VVP +V
Sbjct: 1151 PRLHEIVVAASKNIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVAV 1210

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
             + ++ +++KL +K+  P+H+P Y D+TLED  +TL V FVRELED+IENH+ +++++SG
Sbjct: 1211 KEGRICSIYKLTMKLHKPKHYPKYTDVTLEDWEETLRVGFVRELEDAIENHISLLARISG 1270

Query: 362  ITNMGRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKRKE 541
            I +   +S + N            S++ +                      G DAQK K+
Sbjct: 1271 IKDFQGKSNSSNGLDNDH------SNESASNQNGQTDDDDEVGDTEDAEEDGFDAQKSKQ 1324

Query: 542  QATDEMDYGEDGMETETSLVE-NVDAEGSESEGDDVGNKENDQGTD--GEPQILDAEEEP 712
            +ATDE+DY +DG E ET   E + D E SE   DD    E+D G +  G+   ++  +  
Sbjct: 1325 RATDEVDY-DDGPEEETHDGEKSEDVEVSEDGKDD----EDDNGVEVNGDDSDIEVNDSD 1379

Query: 713  KSVLASKSSDKR----EPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLRFTDEP 880
            K+V   ++S  +    EP S               + DR  +V+A G+ FE+H +F  EP
Sbjct: 1380 KNVTLEETSKSKKRKFEPASK--------------KYDRRVYVKAGGMRFEIHFKFIGEP 1425

Query: 881  HIILSKVVEKAAKNVYIKRSGNIERCSVI-------------DYNRD-------AKLAAL 1000
            HI+L+++ ++ A+ V I+  G + +C  I             D  RD        K+ AL
Sbjct: 1426 HILLAQIAQRTAEKVCIQNFGKVGQCKAITCKESGVIYYGEDDSKRDDIPSSVKEKIPAL 1485

Query: 1001 QTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGIKVNI 1180
            QT+G+ F  FW+M DDL + ++ SND+H +L+ YGVEAA+  II EV+ VF +YGI VNI
Sbjct: 1486 QTSGIHFKTFWEMEDDLKVRYVYSNDVHAILKAYGVEAAKEVIIREVQNVFKSYGISVNI 1545

Query: 1181 RHLTLIADYMTHTGAIRPFSRHGIASSTSPFSKMSFETAAKFIVDAAYHGEVDDLESPSA 1360
            RHL LIAD+MTH+G+ RP +R GIA STSPF K+S+ETA+ FIV+AA HG+VD LE+PS+
Sbjct: 1546 RHLMLIADFMTHSGSYRPLTRSGIADSTSPFVKISYETASNFIVEAARHGQVDTLETPSS 1605

Query: 1361 RICLGLPVKVGTGSFDLLQQV 1423
            RICLGLPVK+GTG  DL+Q++
Sbjct: 1606 RICLGLPVKMGTGCIDLIQKL 1626


>ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Fragaria
            vesca subsp. vesca]
          Length = 1673

 Score =  385 bits (989), Expect = e-104
 Identities = 226/505 (44%), Positives = 296/505 (58%), Gaps = 31/505 (6%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRLQEILM AS  I+TPVMTCPLR GK  +DA  LA +LK++TVADIIE ++VN+ PF+ 
Sbjct: 1180 PRLQEILMTASNDIKTPVMTCPLRMGKA-EDAKSLAGRLKRITVADIIESMKVNIKPFTH 1238

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
               Q   V++L++  F PEH   +     ED  + L V FVR LED+I+NHL+++SK+SG
Sbjct: 1239 QDHQTCRVYELEMTFFIPEHLSKFS----EDWEELLKVKFVRALEDAIQNHLVLLSKISG 1294

Query: 362  ITNMGRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKRKE 541
            I    ++ +A +            S   S                      G+DAQK+K 
Sbjct: 1295 I----KDIKADSLPKASNETDEDISFNISQHEGEGGDDDNVDDSGEGVEDFGLDAQKQKR 1350

Query: 542  QATDEMDYGEDGMETETSLVENVDAEGSESEGDDVGNKENDQGTDGEPQILDAEEEPKSV 721
            Q TDEM+Y +D    E    E   ++  E+E D+ G  + +   DG   I DA ++ +  
Sbjct: 1351 QGTDEMEYDDDW---EDEFNEGRQSDEFENEIDN-GELDVEIDKDGVTGISDANDKMQES 1406

Query: 722  LASKSSDK-----REPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLRFTDEPHI 886
             ++    K     ++  S               E DR  FV AKG  FE+H +FT+EPHI
Sbjct: 1407 CSTGGISKPHSKGKKTKSRDKIKKKTSAKLVRKEYDRATFVSAKGFHFEIHFKFTNEPHI 1466

Query: 887  ILSKVVEKAAKNVYIKRSGNIERCSVIDY-------------------------NRDAKL 991
            +L ++ +K A+NVY+K SGNI  C  ID                            + K+
Sbjct: 1467 LLDQIAQKTARNVYVKSSGNILDCQDIDIYGNEDQVFCCWNDPRNKLSGEKNPSEEEKKM 1526

Query: 992  AALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGIK 1171
             ALQTAGVDF   W + DDLD+N+I SN++H +L TYGVEAAR TII E+  VF  YGI 
Sbjct: 1527 RALQTAGVDFATLWKLQDDLDVNYIYSNNIHAMLNTYGVEAARETIIKEISNVFKVYGIS 1586

Query: 1172 VNIRHLTLIADYMTHTGAIRPFSRH-GIASSTSPFSKMSFETAAKFIVDAAYHGEVDDLE 1348
            VNIRHL LIADYMT +G+ RP +R  GIA STSP +KMSFETA+KFI +AAYHGE DDLE
Sbjct: 1587 VNIRHLLLIADYMTRSGSYRPMNRFGGIAESTSPMNKMSFETASKFIQEAAYHGEKDDLE 1646

Query: 1349 SPSARICLGLPVKVGTGSFDLLQQV 1423
            +PSARICLGLPVKVGTG FDL+ ++
Sbjct: 1647 TPSARICLGLPVKVGTGCFDLMHKM 1671


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  384 bits (987), Expect = e-104
 Identities = 218/495 (44%), Positives = 300/495 (60%), Gaps = 21/495 (4%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRLQEILM AS+ I+TP+MTCPL++G + D A  LA KLKK+TVADIIE + V VVPFS 
Sbjct: 1167 PRLQEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQ 1226

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
             K+++ +++KL+I  +  E+   +  I+ ED   TL+ +F+ ELE  IE  ++++SK++G
Sbjct: 1227 RKREICSIYKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSKING 1286

Query: 362  ITNMGRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKRKE 541
            I     +S++              SS+Q                      LG D +K+K 
Sbjct: 1287 IKXFVPDSQSKGSSEGDEVS----SSRQEEMDDDDEGNDLDVAED-----LGSDXEKQKL 1337

Query: 542  QATDEMDYGEDGMETETSLVENVDAEGSESEGDDVGNKENDQGTDGEPQILDAEEEPKSV 721
            QA DEMDY +D  +   +   +   E    +GD+     ND     +     +E +P+ V
Sbjct: 1338 QANDEMDYEDDSEDDLNAKESSTGFESEVDQGDEAEITNNDMIEIVKDSA--SENQPEIV 1395

Query: 722  LASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLRFTDEPHIILSKV 901
              SKS  K +                  E+DR  FVEAK   FEVH +FT+EPH +LS++
Sbjct: 1396 DVSKSMSKEKTTETSKEKKKVKSELVRKETDRSIFVEAKENHFEVHFKFTNEPHTLLSQI 1455

Query: 902  VEKAAKNVYIKRSGNIERCSVIDYNRDA--------------------KLAALQTAGVDF 1021
            V++AA+ V I+RSG I +C  I                          K+ ALQT+GVDF
Sbjct: 1456 VQRAAQKVSIQRSGKIIQCQQITCKEGQVIYHGNNLKERKNLKPEEKEKIPALQTSGVDF 1515

Query: 1022 GAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGIKVNIRHLTLIA 1201
               W+M D+LD+ +I SND+H +L+TYGVEAARATII E++ +F +YGI VNIRHL+L+A
Sbjct: 1516 KTLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVA 1575

Query: 1202 DYMTHTGAIRPFSR-HGIASSTSPFSKMSFETAAKFIVDAAYHGEVDDLESPSARICLGL 1378
            DYMTH+G  RP SR  GI+ S SPFS+M+FETA KFIV AA HGEVD+LE+PS+RICLGL
Sbjct: 1576 DYMTHSGGYRPMSRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGL 1635

Query: 1379 PVKVGTGSFDLLQQV 1423
            PVK+GTGSFDL+Q++
Sbjct: 1636 PVKMGTGSFDLMQKI 1650


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score =  384 bits (986), Expect = e-104
 Identities = 218/494 (44%), Positives = 300/494 (60%), Gaps = 21/494 (4%)
 Frame = +2

Query: 5    RLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSVY 184
            RLQEILM AS+ I+TP+MTCPL++G + D A  LA KLKK+TVADIIE + V VVPFS  
Sbjct: 1165 RLQEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQR 1224

Query: 185  KQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSGI 364
            K+++ +++KL+I  +  E+   +  I+ ED   TL+ +F+ ELE  IE  ++++SK++GI
Sbjct: 1225 KREICSIYKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSKINGI 1284

Query: 365  TNMGRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKRKEQ 544
             N   +S++              SS+Q                      LG D +K+K Q
Sbjct: 1285 KNFVPDSQS----KGSSEGDEVSSSRQKE----NDDDDDEGNDLDVAEDLGSDMKKQKLQ 1336

Query: 545  ATDEMDYGEDGMETETSLVENVDAEGSESEGDDVGNKENDQGTDGEPQILDAEEEPKSVL 724
            A DEMDY +D  +   +   +   E    +GD+     ND     +     +E +P+ V 
Sbjct: 1337 ANDEMDYEDDSEDDLNAKESSTGFESEVDQGDEAEITNNDMIEIVKDSA--SENQPEIVD 1394

Query: 725  ASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLRFTDEPHIILSKVV 904
             SKS  K +                  E+DR  FVEAK   FEVH +FT+EPH +LS++V
Sbjct: 1395 VSKSMSKEKTTETSKEKKKVKSELVRKETDRSIFVEAKENHFEVHFKFTNEPHTLLSQIV 1454

Query: 905  EKAAKNVYIKRSGNIERCSVIDY--------------------NRDAKLAALQTAGVDFG 1024
            ++AA+ V I+RSG I +C  I                          K+ ALQT+GVDF 
Sbjct: 1455 QRAAQKVSIQRSGKIIQCQQITCKEGQVIYHGNNLKERKNLKPEEKEKIPALQTSGVDFK 1514

Query: 1025 AFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGIKVNIRHLTLIAD 1204
              W+M D+LD+ +I SND+H +L+TYGVEAARATII E++ +F +YGI VNIRHL+L+AD
Sbjct: 1515 TLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVAD 1574

Query: 1205 YMTHTGAIRPFSR-HGIASSTSPFSKMSFETAAKFIVDAAYHGEVDDLESPSARICLGLP 1381
            YMTH+G  RP SR  GI+ S SPFS+M+FETA KFIV AA HGEVD+LE+PS+RICLGLP
Sbjct: 1575 YMTHSGGYRPMSRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGLP 1634

Query: 1382 VKVGTGSFDLLQQV 1423
            VK+GTGSFDL+Q++
Sbjct: 1635 VKMGTGSFDLMQKI 1648


>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
            lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
            ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
          Length = 1678

 Score =  375 bits (964), Expect = e-101
 Identities = 219/504 (43%), Positives = 305/504 (60%), Gaps = 30/504 (5%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRLQEILM A+  I+TP+MTCPL KGKT++DA+ +  KL+K+TVADII+ ++++VVP++V
Sbjct: 1195 PRLQEILMTAAADIKTPIMTCPLLKGKTKEDANDITGKLRKITVADIIKSMDLSVVPYTV 1254

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
            YK +V ++ KLKI ++ PEH+P + DIT +D  +T+ V+F+R+LED+IE H+ M+ ++ G
Sbjct: 1255 YKNEVCSIHKLKINLYKPEHYPKHTDITEKDWEETMTVVFLRKLEDAIEIHMKMLHRIRG 1314

Query: 362  ITNMGRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKRKE 541
            I N  +  EA N            S KQ+                     LG DAQK+K+
Sbjct: 1315 ICN-DKGPEAGNETDNDDSV----SGKQNKDDGDDDGEGTEVDD------LGSDAQKQKK 1363

Query: 542  QATDEMDYGEDGME--TETSLVENVDAEGSESEGDDVGNKEND------QGTDGEPQILD 697
            Q TDEMDY E+  +   E S +  V+    +SE +D    + D      +    + + ++
Sbjct: 1364 QVTDEMDYEENSEDETNEPSSISGVEDPEMDSENEDAEVSKEDTPEPQEEADVSKEETME 1423

Query: 698  AEEEPKSVLASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLRF-TD 874
             ++E K+V   K   K++                   SDR  FV  +G  FEVH +F TD
Sbjct: 1424 PQKEVKAVKNVKEQSKKK-----------RRKFVGATSDRHIFVRGEGEKFEVHFQFATD 1472

Query: 875  EPHIILSKVVEKAAKNVYIKRSGNIERCSVI------------------DYNRDAKLA-- 994
            +PHI+L+++ +K A+ VYI+ SG IERC+V                   + + D K A  
Sbjct: 1473 DPHILLAQIAQKTAQKVYIQDSGKIERCTVANCGDPQVIYHGDNPKERREISNDEKKASP 1532

Query: 995  ALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGIKV 1174
            AL  +GVDF A W+  D LD+ ++ SN +H +L  +GVEAAR TII E+  VF +YGI V
Sbjct: 1533 ALHASGVDFPALWEFQDKLDVRYLYSNSIHDMLNVFGVEAARETIIREINHVFKSYGISV 1592

Query: 1175 NIRHLTLIADYMTHTGAIRPFSR-HGIASSTSPFSKMSFETAAKFIVDAAYHGEVDDLES 1351
            +IRHL LIADYMT +G  RP SR  GIA STSPF +M+FETA KFIV AA +GE D LE+
Sbjct: 1593 SIRHLNLIADYMTFSGGYRPMSRMGGIAESTSPFCRMTFETATKFIVQAATYGEKDTLET 1652

Query: 1352 PSARICLGLPVKVGTGSFDLLQQV 1423
            PSARICLGLP   GTG FDL+Q+V
Sbjct: 1653 PSARICLGLPALSGTGCFDLMQRV 1676


>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
            gi|482559195|gb|EOA23386.1| hypothetical protein
            CARUB_v10016563mg [Capsella rubella]
          Length = 1651

 Score =  374 bits (961), Expect = e-101
 Identities = 219/496 (44%), Positives = 300/496 (60%), Gaps = 22/496 (4%)
 Frame = +2

Query: 2    PRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRLAAKLKKVTVADIIEKIEVNVVPFSV 181
            PRLQEILM A+  I+TP+MTCPL KGKT++DA+ +  KL+K+TVADII+ +E++VVP+++
Sbjct: 1181 PRLQEILMTAAADIKTPIMTCPLLKGKTKEDANDITDKLRKITVADIIKDMELSVVPYTI 1240

Query: 182  YKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLDVLFVRELEDSIENHLIMVSKVSG 361
            +K  + ++ KLKI ++ PEH+P   DIT ED  +T+ V+F+R+LED+IE H+ M+ ++ G
Sbjct: 1241 HKNDICSIHKLKINLYKPEHYPKNTDITEEDWEETMKVVFLRKLEDAIEIHMKMLHRMRG 1300

Query: 362  ITNMGRESEAVNXXXXXXXXXXXXSSKQSHXXXXXXXXXXXXXXXXXXXXLGVDAQKRKE 541
            I N  +++                S KQ+                     LG DAQKRK+
Sbjct: 1301 IRNFVQDTSPT--AGNETDNDNSISGKQTE--------DDDDGEGTEVDDLGSDAQKRKK 1350

Query: 542  QATDEMDYGEDGMETETSLVENVDAEGSESEGDDVGNKENDQGTDGEPQILDAEEEPKSV 721
            QATDEMDY E+  E ET+  E     G E    D  N++ +   +G P   + ++E K V
Sbjct: 1351 QATDEMDY-EENSEDETN--EPSSISGVEDPEIDNENEDVEVSKEGTP---EQQKEVKKV 1404

Query: 722  LASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLDFEVHLRF-TDEPHIILSK 898
               K   K++                  + DR  FV+ +G  FEVH +F T EPHI+L++
Sbjct: 1405 KNVKQQSKKK-----------RRKYVGADEDRHIFVKGEGEKFEVHFKFPTSEPHILLAQ 1453

Query: 899  VVEKAAKNVYIKRSGNIERCSVI------------------DYNRDAKLA--ALQTAGVD 1018
            + +K A+ VYI+ SG IERC+V                   + + D K A  AL  +GVD
Sbjct: 1454 IAQKTAQKVYIQNSGKIERCTVANCGDPQVIYHGDDPKERREISNDEKKASPALHASGVD 1513

Query: 1019 FGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGIKVNIRHLTLI 1198
            F A W+  D LD+ ++ SN +H +L  +GVEAAR TII E+  VF +YGI V+IRHL LI
Sbjct: 1514 FPALWEFQDKLDVRYLYSNSIHDMLNIFGVEAARETIIREINHVFKSYGISVSIRHLNLI 1573

Query: 1199 ADYMTHTGAIRPFSR-HGIASSTSPFSKMSFETAAKFIVDAAYHGEVDDLESPSARICLG 1375
            ADYMT +G  RP SR  GIA STSPF +M+FETA KFIV AA +GE D LE+PSARICLG
Sbjct: 1574 ADYMTFSGGYRPMSRMGGIAESTSPFCRMTFETATKFIVQAATYGEKDTLETPSARICLG 1633

Query: 1376 LPVKVGTGSFDLLQQV 1423
            LP   GTG FDL+Q+V
Sbjct: 1634 LPALSGTGCFDLMQRV 1649