BLASTX nr result
ID: Papaver25_contig00018496
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00018496
(563 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACJ86068.1| unknown [Medicago truncatula] gi|388493280|gb|AFK... 66 7e-09
gb|ELT90598.1| hypothetical protein CAPTEDRAFT_145207, partial [... 45 2e-07
emb|CAP22860.2| Protein CBR-LSM-3 [Caenorhabditis briggsae] 43 3e-06
gb|EYU36853.1| hypothetical protein MIMGU_mgv1a017018mg [Mimulus... 57 3e-06
gb|EYU17441.1| hypothetical protein MIMGU_mgv1a015297mg [Mimulus... 57 3e-06
ref|XP_004513701.1| PREDICTED: U6 snRNA-associated Sm-like prote... 57 3e-06
gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK4380... 57 3e-06
ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycin... 57 3e-06
ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis... 57 3e-06
ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Me... 57 3e-06
ref|XP_006645076.1| PREDICTED: U6 snRNA-associated Sm-like prote... 57 4e-06
ref|XP_004970703.1| PREDICTED: U6 snRNA-associated Sm-like prote... 57 4e-06
ref|XP_002458821.1| hypothetical protein SORBIDRAFT_03g040930 [S... 57 4e-06
ref|NP_001044909.1| Os01g0866700 [Oryza sativa Japonica Group] g... 57 4e-06
ref|XP_005629100.1| PREDICTED: U6 snRNA-associated Sm-like prote... 43 7e-06
gb|EXC25394.1| hypothetical protein L484_016776 [Morus notabilis] 56 7e-06
ref|XP_006434453.1| hypothetical protein CICLE_v10002950mg [Citr... 56 7e-06
ref|XP_007019479.1| Small nuclear ribonucleoprotein family prote... 56 7e-06
ref|XP_004290522.1| PREDICTED: U6 snRNA-associated Sm-like prote... 56 7e-06
ref|XP_002307496.1| small nuclear ribonucleoprotein [Populus tri... 56 7e-06
>gb|ACJ86068.1| unknown [Medicago truncatula] gi|388493280|gb|AFK34706.1| unknown
[Medicago truncatula]
Length = 110
Score = 65.9 bits (159), Expect = 7e-09
Identities = 27/46 (58%), Positives = 32/46 (69%)
Frame = +1
Query: 256 LSCP*WWRN*NHTISPNKKKWNCSLGSPNYLLICFIINFNCSNDFF 393
L P WWRN H ISPNK++WNC L SP+ +C IINFN N+FF
Sbjct: 2 LCSPQWWRNQYHAISPNKQEWNCPLCSPDNFFVCLIINFNSCNNFF 47
>gb|ELT90598.1| hypothetical protein CAPTEDRAFT_145207, partial [Capitella teleta]
Length = 70
Score = 44.7 bits (104), Expect(2) = 2e-07
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -3
Query: 333 TKRTVPFLFVRGDGVILVSPPLRT 262
TKR +P LFVRGDGVILVSPP RT
Sbjct: 45 TKRIIPMLFVRGDGVILVSPPTRT 68
Score = 36.2 bits (82), Expect(2) = 2e-07
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -1
Query: 461 VKEPLDLIRLSLDERIYV 408
V+EPLDL+RLSLDERIYV
Sbjct: 8 VEEPLDLVRLSLDERIYV 25
>emb|CAP22860.2| Protein CBR-LSM-3 [Caenorhabditis briggsae]
Length = 84
Score = 42.7 bits (99), Expect(2) = 3e-06
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 339 RTTKRTVPFLFVRGDGVILVSPPLRTA 259
R +KR VP LFVRGD VILVSPP+R +
Sbjct: 58 RQSKRVVPMLFVRGDSVILVSPPIRAS 84
Score = 34.3 bits (77), Expect(2) = 3e-06
Identities = 14/18 (77%), Positives = 18/18 (100%)
Frame = -1
Query: 461 VKEPLDLIRLSLDERIYV 408
V+EPLDL+RLSLDE++YV
Sbjct: 14 VEEPLDLLRLSLDEKVYV 31
>gb|EYU36853.1| hypothetical protein MIMGU_mgv1a017018mg [Mimulus guttatus]
gi|604331996|gb|EYU36854.1| hypothetical protein
MIMGU_mgv1a017018mg [Mimulus guttatus]
Length = 97
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -3
Query: 339 RTTKRTVPFLFVRGDGVILVSPPLRTA 259
RTTKRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 71 RTTKRTVPFLFVRGDGVILVSPPLRTA 97
>gb|EYU17441.1| hypothetical protein MIMGU_mgv1a015297mg [Mimulus guttatus]
Length = 162
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -3
Query: 339 RTTKRTVPFLFVRGDGVILVSPPLRTA 259
RTTKRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 136 RTTKRTVPFLFVRGDGVILVSPPLRTA 162
>ref|XP_004513701.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Cicer
arietinum]
Length = 98
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -3
Query: 339 RTTKRTVPFLFVRGDGVILVSPPLRTA 259
RTTKRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 72 RTTKRTVPFLFVRGDGVILVSPPLRTA 98
>gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK43809.1| unknown
[Lotus japonicus]
Length = 97
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -3
Query: 339 RTTKRTVPFLFVRGDGVILVSPPLRTA 259
RTTKRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 71 RTTKRTVPFLFVRGDGVILVSPPLRTA 97
>ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycine max]
gi|255626487|gb|ACU13588.1| unknown [Glycine max]
Length = 97
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -3
Query: 339 RTTKRTVPFLFVRGDGVILVSPPLRTA 259
RTTKRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 71 RTTKRTVPFLFVRGDGVILVSPPLRTA 97
>ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis]
gi|593703255|ref|XP_007152030.1| hypothetical protein
PHAVU_004G095700g [Phaseolus vulgaris]
gi|223527852|gb|EEF29947.1| snrnp sm protein, putative
[Ricinus communis] gi|561025339|gb|ESW24024.1|
hypothetical protein PHAVU_004G095700g [Phaseolus
vulgaris]
Length = 97
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -3
Query: 339 RTTKRTVPFLFVRGDGVILVSPPLRTA 259
RTTKRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 71 RTTKRTVPFLFVRGDGVILVSPPLRTA 97
>ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Medicago truncatula]
gi|355508867|gb|AES90009.1| U6 snRNA-associated Sm-like
protein LSm3 [Medicago truncatula]
Length = 98
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -3
Query: 339 RTTKRTVPFLFVRGDGVILVSPPLRTA 259
RTTKRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 72 RTTKRTVPFLFVRGDGVILVSPPLRTA 98
>ref|XP_006645076.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Oryza
brachyantha]
Length = 105
Score = 56.6 bits (135), Expect = 4e-06
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = -3
Query: 339 RTTKRTVPFLFVRGDGVILVSPPLRTA 259
RTTKRT+PFLFVRGDGVILVSPPLRTA
Sbjct: 79 RTTKRTIPFLFVRGDGVILVSPPLRTA 105
>ref|XP_004970703.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Setaria
italica]
Length = 98
Score = 56.6 bits (135), Expect = 4e-06
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = -3
Query: 339 RTTKRTVPFLFVRGDGVILVSPPLRTA 259
RTTKRT+PFLFVRGDGVILVSPPLRTA
Sbjct: 72 RTTKRTIPFLFVRGDGVILVSPPLRTA 98
>ref|XP_002458821.1| hypothetical protein SORBIDRAFT_03g040930 [Sorghum bicolor]
gi|194699902|gb|ACF84035.1| unknown [Zea mays]
gi|195628156|gb|ACG35908.1| U6 snRNA-associated Sm-like
protein LSm3 [Zea mays] gi|195643108|gb|ACG41022.1| U6
snRNA-associated Sm-like protein LSm3 [Zea mays]
gi|241930796|gb|EES03941.1| hypothetical protein
SORBIDRAFT_03g040930 [Sorghum bicolor]
Length = 98
Score = 56.6 bits (135), Expect = 4e-06
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = -3
Query: 339 RTTKRTVPFLFVRGDGVILVSPPLRTA 259
RTTKRT+PFLFVRGDGVILVSPPLRTA
Sbjct: 72 RTTKRTIPFLFVRGDGVILVSPPLRTA 98
>ref|NP_001044909.1| Os01g0866700 [Oryza sativa Japonica Group]
gi|56785201|dbj|BAD81919.1| small nuclear
ribonucleoprotein-like [Oryza sativa Japonica Group]
gi|113534440|dbj|BAF06823.1| Os01g0866700 [Oryza sativa
Japonica Group] gi|125528497|gb|EAY76611.1| hypothetical
protein OsI_04561 [Oryza sativa Indica Group]
gi|125572761|gb|EAZ14276.1| hypothetical protein
OsJ_04201 [Oryza sativa Japonica Group]
gi|215708805|dbj|BAG94074.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215765758|dbj|BAG87455.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 104
Score = 56.6 bits (135), Expect = 4e-06
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = -3
Query: 339 RTTKRTVPFLFVRGDGVILVSPPLRTA 259
RTTKRT+PFLFVRGDGVILVSPPLRTA
Sbjct: 78 RTTKRTIPFLFVRGDGVILVSPPLRTA 104
>ref|XP_005629100.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Canis
lupus familiaris]
Length = 98
Score = 43.1 bits (100), Expect(2) = 7e-06
Identities = 17/25 (68%), Positives = 23/25 (92%)
Frame = -3
Query: 339 RTTKRTVPFLFVRGDGVILVSPPLR 265
++TKR +P LFV+GDGV+LV+PPLR
Sbjct: 72 KSTKRNIPMLFVQGDGVVLVAPPLR 96
Score = 32.7 bits (73), Expect(2) = 7e-06
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1
Query: 461 VKEPLDLIRLSLDERIYV 408
V+E LDLIRLSLDERIYV
Sbjct: 14 VEELLDLIRLSLDERIYV 31
>gb|EXC25394.1| hypothetical protein L484_016776 [Morus notabilis]
Length = 98
Score = 55.8 bits (133), Expect = 7e-06
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = -3
Query: 339 RTTKRTVPFLFVRGDGVILVSPPLRTA 259
RTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 72 RTTRRTVPFLFVRGDGVILVSPPLRTA 98
>ref|XP_006434453.1| hypothetical protein CICLE_v10002950mg [Citrus clementina]
gi|568838092|ref|XP_006473051.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm3-like [Citrus
sinensis] gi|557536575|gb|ESR47693.1| hypothetical
protein CICLE_v10002950mg [Citrus clementina]
Length = 97
Score = 55.8 bits (133), Expect = 7e-06
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = -3
Query: 339 RTTKRTVPFLFVRGDGVILVSPPLRTA 259
RTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 71 RTTRRTVPFLFVRGDGVILVSPPLRTA 97
>ref|XP_007019479.1| Small nuclear ribonucleoprotein family protein [Theobroma cacao]
gi|508724807|gb|EOY16704.1| Small nuclear
ribonucleoprotein family protein [Theobroma cacao]
Length = 97
Score = 55.8 bits (133), Expect = 7e-06
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = -3
Query: 339 RTTKRTVPFLFVRGDGVILVSPPLRTA 259
RTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 71 RTTRRTVPFLFVRGDGVILVSPPLRTA 97
>ref|XP_004290522.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Fragaria
vesca subsp. vesca]
Length = 97
Score = 55.8 bits (133), Expect = 7e-06
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = -3
Query: 339 RTTKRTVPFLFVRGDGVILVSPPLRTA 259
RTTKRTVP+LFVRGDGVILVSPPLRTA
Sbjct: 71 RTTKRTVPYLFVRGDGVILVSPPLRTA 97
>ref|XP_002307496.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|359493111|ref|XP_002266320.2| PREDICTED: U6
snRNA-associated Sm-like protein LSm3-like isoform 1
[Vitis vinifera] gi|222856945|gb|EEE94492.1| small
nuclear ribonucleoprotein [Populus trichocarpa]
Length = 97
Score = 55.8 bits (133), Expect = 7e-06
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = -3
Query: 339 RTTKRTVPFLFVRGDGVILVSPPLRTA 259
RTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 71 RTTRRTVPFLFVRGDGVILVSPPLRTA 97