BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00018492
         (1235 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40152.3| unnamed protein product [Vitis vinifera]              252   2e-64
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   252   2e-64
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...   229   1e-57
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   224   8e-56
gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus...   223   1e-55
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub...   223   1e-55
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   222   2e-55
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun...   214   5e-53
ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|3555218...   213   2e-52
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag...   213   2e-52
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub...   211   7e-52
ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phas...   206   2e-50
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no...   203   1e-49
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put...   202   2e-49
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...   201   7e-49
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...   200   9e-49
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub...   200   9e-49
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub...   199   2e-48
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac...   197   8e-48
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   192   3e-46

>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  252 bits (644), Expect = 2e-64
 Identities = 139/284 (48%), Positives = 185/284 (65%), Gaps = 3/284 (1%)
 Frame = -2

Query: 1228 KQPQDDPSDSWGGHVEKANTTGQNGKEENGQWNQWSEPPKNETVTANNKSAGTWGTSMAG 1049
            K+  + P+ + G   +     G N  EE  QWNQ     KN+     ++S+  WG S   
Sbjct: 1603 KEQSNQPASTHGW--DSPGAKGWNDVEEQSQWNQRGSAVKND----QSESSHGWGPS--- 1653

Query: 1048 EHVNQSADSQVWGS--SSVGDQAEKEVQWSQRKEPPAKPFAWNTNKSSRGWGSSNTGDWK 875
               NQ   SQ WGS  +  G ++E + QW Q     ++P      + SRGWGS+NT +WK
Sbjct: 1654 NEQNQLPSSQGWGSPNAGAGHESETQSQWGQPSGKKSRP------EGSRGWGSNNT-EWK 1706

Query: 874  NK-GRPNNPQGTPDDQSGWNASGLYTATRQRLDRFTSEEQSALSEVDTIILAIRKIMQQS 698
            NK  RPN PQG  +D   ++A G++TATRQR+D FTSEEQ  L +V+ I+ +IR+IM Q+
Sbjct: 1707 NKKNRPNKPQGPLNDD--YSAGGIFTATRQRVDIFTSEEQDILLDVEPIMQSIRRIMHQA 1764

Query: 697  RDKDGEPLSAEDQAYVLENVFKYHPDKDVKMGSGIDHVMVSTHSSFKDTRCFYVVSTDGC 518
               DG+PLSA+DQ+Y+L+ VF  HPDK VKMG+GID+VMVS HSSF ++RCFYVVSTDG 
Sbjct: 1765 GYNDGDPLSADDQSYILDKVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGH 1824

Query: 517  REDFSYRKCLENFVKEKHAAVAESFNEKYFKKPQPRDGGANRNR 386
            +EDFSYRKCLENF+KEK+   AE+F  KYF++P+    G NR R
Sbjct: 1825 KEDFSYRKCLENFIKEKYPDNAETFIGKYFRRPR---AGGNRER 1865


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  252 bits (644), Expect = 2e-64
 Identities = 139/284 (48%), Positives = 185/284 (65%), Gaps = 3/284 (1%)
 Frame = -2

Query: 1228 KQPQDDPSDSWGGHVEKANTTGQNGKEENGQWNQWSEPPKNETVTANNKSAGTWGTSMAG 1049
            K+  + P+ + G   +     G N  EE  QWNQ     KN+     ++S+  WG S   
Sbjct: 1543 KEQSNQPASTHGW--DSPGAKGWNDVEEQSQWNQRGSAVKND----QSESSHGWGPS--- 1593

Query: 1048 EHVNQSADSQVWGS--SSVGDQAEKEVQWSQRKEPPAKPFAWNTNKSSRGWGSSNTGDWK 875
               NQ   SQ WGS  +  G ++E + QW Q     ++P      + SRGWGS+NT +WK
Sbjct: 1594 NEQNQLPSSQGWGSPNAGAGHESETQSQWGQPSGKKSRP------EGSRGWGSNNT-EWK 1646

Query: 874  NK-GRPNNPQGTPDDQSGWNASGLYTATRQRLDRFTSEEQSALSEVDTIILAIRKIMQQS 698
            NK  RPN PQG  +D   ++A G++TATRQR+D FTSEEQ  L +V+ I+ +IR+IM Q+
Sbjct: 1647 NKKNRPNKPQGPLNDD--YSAGGIFTATRQRVDIFTSEEQDILLDVEPIMQSIRRIMHQA 1704

Query: 697  RDKDGEPLSAEDQAYVLENVFKYHPDKDVKMGSGIDHVMVSTHSSFKDTRCFYVVSTDGC 518
               DG+PLSA+DQ+Y+L+ VF  HPDK VKMG+GID+VMVS HSSF ++RCFYVVSTDG 
Sbjct: 1705 GYNDGDPLSADDQSYILDKVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGH 1764

Query: 517  REDFSYRKCLENFVKEKHAAVAESFNEKYFKKPQPRDGGANRNR 386
            +EDFSYRKCLENF+KEK+   AE+F  KYF++P+    G NR R
Sbjct: 1765 KEDFSYRKCLENFIKEKYPDNAETFIGKYFRRPR---AGGNRER 1805


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
            gi|550343552|gb|EEE78905.2| hypothetical protein
            POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score =  229 bits (585), Expect = 1e-57
 Identities = 135/312 (43%), Positives = 179/312 (57%), Gaps = 26/312 (8%)
 Frame = -2

Query: 1228 KQPQDDPSDSWGGHVEKA---------NTTGQNGKE-ENGQWNQWSEPPKNETVTANNKS 1079
            K    + S  WG   E           N+ G NG E  N   NQ       E+   N  S
Sbjct: 1617 KPKSSENSQGWGLSKESGKEVHEWGVPNSAGGNGSETNNNNENQSLVEQGKESGWDNKAS 1676

Query: 1078 AGTWGTSMAGEHVNQSADSQVWGS---------------SSVGDQAEKEVQWSQRKEPPA 944
            +   GT+         A S+ WGS               S  G+ + ++ QW Q+    +
Sbjct: 1677 SNQEGTASGWGKPKSPALSEGWGSPREPVKAVHGWGVPNSGGGNGSGRDQQWGQQ----S 1732

Query: 943  KPFAWNTNKSSRGWGSSNTGDWKNK-GRPNNPQGTPDDQSGWNASGLYTATRQRLDRFTS 767
            + F  +  + SRGWGS+N GDWKNK  RP+ P          NASG++T TRQRLD FTS
Sbjct: 1733 REFKKDRFEGSRGWGSNN-GDWKNKRNRPSKPH------EDLNASGIFTTTRQRLDVFTS 1785

Query: 766  EEQSALSEVDTIILAIRKIMQQSRDKDGEPLSAEDQAYVLENVFKYHPDKDVKMGSGIDH 587
            +EQ  LS+++ ++L+IR+IM Q+   DG+PLSA+DQ+YVL+NVF YHPDK VKMG+GIDH
Sbjct: 1786 QEQDILSDIEPLMLSIRRIMHQTGYNDGDPLSADDQSYVLDNVFHYHPDKAVKMGAGIDH 1845

Query: 586  VMVSTHSSFKDTRCFYVVSTDGCREDFSYRKCLENFVKEKHAAVAESFNEKYFKKPQPRD 407
            V VS HS+F+++RCFY+VSTDGC++DFSYRKCLENF+K K+  +A+ F  KYF     R 
Sbjct: 1846 VTVSRHSNFQESRCFYIVSTDGCKQDFSYRKCLENFIKGKYPDLADEFIAKYF----ARR 1901

Query: 406  GGANRNRMEVGT 371
            G   R     GT
Sbjct: 1902 GNRQRTPAPEGT 1913


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1-like [Cucumis sativus]
          Length = 2019

 Score =  224 bits (570), Expect = 8e-56
 Identities = 123/285 (43%), Positives = 173/285 (60%), Gaps = 19/285 (6%)
 Frame = -2

Query: 1183 EKANTTGQNGKEENGQ-WNQWSEPPKNETVTANNKSAGTWGTSM-AGEHVNQSADSQVWG 1010
            + ++T G + +E+  + W++      +++  + N S G+WG    A E  ++ +      
Sbjct: 1713 KSSDTRGWDSQEKTDKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASEECSRESQDDSST 1772

Query: 1009 SSSVGDQAEKEVQWSQRKEPPAKPFAWNTNKSS----------------RGWGSSNTGDW 878
              S     E  + W Q+K P      W +NK S                +GWG  N G+W
Sbjct: 1773 QFSQLKPPETSLGWEQQKSPEVS-HGWGSNKESSEQTSSHGWDKKNQGSKGWGG-NAGEW 1830

Query: 877  KN-KGRPNNPQGTPDDQSGWNASGLYTATRQRLDRFTSEEQSALSEVDTIILAIRKIMQQ 701
            KN K RP    G  +D +  N   LYTA+ QRLD FTSEEQ  L++++ I+ +IRK+M Q
Sbjct: 1831 KNRKNRPPKSPGMSNDDA--NLRALYTASGQRLDMFTSEEQDILADIEPIMQSIRKVMHQ 1888

Query: 700  SRDKDGEPLSAEDQAYVLENVFKYHPDKDVKMGSGIDHVMVSTHSSFKDTRCFYVVSTDG 521
            S   DG+PLSAEDQ++VL++VF +HPDK  KMG+GIDH MVS HSSF+++RCFYVV+TDG
Sbjct: 1889 SGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDG 1948

Query: 520  CREDFSYRKCLENFVKEKHAAVAESFNEKYFKKPQPRDGGANRNR 386
             +EDFSYRKCL+NF+K K+  +AE F  KYF+KP+P     NRNR
Sbjct: 1949 HKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRKPRP-----NRNR 1988


>gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus]
          Length = 2113

 Score =  223 bits (569), Expect = 1e-55
 Identities = 121/300 (40%), Positives = 172/300 (57%), Gaps = 7/300 (2%)
 Frame = -2

Query: 1228 KQPQDDPSDSWGGHVEKANTTGQNGKEENGQWNQWSEPPKNETVTANNKSAGTWGTSMAG 1049
            ++ QD   D+     + A           G  + W +P        N K+   W +S   
Sbjct: 1771 QKEQDGSKDNNPWQTKVAEQANSEPLSTWGSSSDWVKPDSQTPTGDNTKNESPWSSSQ-- 1828

Query: 1048 EHVNQSADSQVWGSSSV--GDQAEKEVQWSQRKEPPAKPFAWNTN-----KSSRGWGSSN 890
            + +N S DSQ WGSS V   +  +++ QW  R     +   W        + S+G G +N
Sbjct: 1829 KLLNDSTDSQGWGSSKVDTANDNDEQPQWG-RGRGRGRGRGWGRGVGRGREGSQGRGPTN 1887

Query: 889  TGDWKNKGRPNNPQGTPDDQSGWNASGLYTATRQRLDRFTSEEQSALSEVDTIILAIRKI 710
              DWKNK R   P   P      NA G++TA+RQRLD FT+EEQ  L E +TI+  IR++
Sbjct: 1888 DRDWKNK-RSGGPVDDP------NAPGIFTASRQRLDSFTAEEQEVLLETETIMKNIRRV 1940

Query: 709  MQQSRDKDGEPLSAEDQAYVLENVFKYHPDKDVKMGSGIDHVMVSTHSSFKDTRCFYVVS 530
            M Q+   DG+PLSA+DQ Y+++NV  +HP+K +K+G+G+DH+MV+ HS F+ +RC Y V+
Sbjct: 1941 MHQTGYNDGDPLSADDQKYIVDNVLNHHPEKSLKIGAGLDHIMVNKHSEFQMSRCLYAVT 2000

Query: 529  TDGCREDFSYRKCLENFVKEKHAAVAESFNEKYFKKPQPRDGGANRNRMEVGTPKADTPN 350
             DG + DFSYRKCL+NF++ K+  VAESF  KYFKKPQPR G  N ++      +A TPN
Sbjct: 2001 IDGSKADFSYRKCLDNFIRGKYPDVAESFIAKYFKKPQPRTGWNNNSKDRPPRSEAGTPN 2060


>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
            arietinum]
          Length = 2263

 Score =  223 bits (568), Expect = 1e-55
 Identities = 127/293 (43%), Positives = 169/293 (57%), Gaps = 4/293 (1%)
 Frame = -2

Query: 1234 TQKQPQDDPSDSWGGHVEKANTT-GQNGKEENGQWNQWSEPPKNETVTANNKSAGTWGTS 1058
            T +   DD  DSW   V  AN++ G+   +EN  W+      KNE+              
Sbjct: 1963 TWEHKSDDVKDSWDAKVPVANSSWGKPKSQENQPWDS-----KNES-------------- 2003

Query: 1057 MAGEHVNQSADSQVWGS--SSVGDQAEKEVQWSQRKEPPAKPFAWNTNKSSRGWGSSNTG 884
                  N +A S+ W S  +S    ++K  QW +      K   +  ++ S+GWGS N G
Sbjct: 2004 ------NPTASSRGWDSQVASANSDSDKNFQWGKPGRESFKKNRFEGSQGSQGWGS-NAG 2056

Query: 883  DWKNKGRPNNPQGTPDDQSGWNASGLYTATRQRLDRFTSEEQSALSEVDTIILAIRKIMQ 704
            DWKNK RP  P G                   RLD ++SEEQ  L +++ I+ +IR+IMQ
Sbjct: 2057 DWKNKNRPARPPGP------------------RLDLYSSEEQDILKDIEPIVQSIRRIMQ 2098

Query: 703  QSRDKDGEPLSAEDQAYVLENVFKYHPDKDVKMGSGIDHVMVSTHSSFKDTRCFYVVSTD 524
            Q    DG+PL+AEDQ YVLENVF++HPDK+ KMG GIDHVMVS HS+F+++RCFYVV  D
Sbjct: 2099 QQGYNDGDPLAAEDQQYVLENVFEHHPDKETKMGVGIDHVMVSRHSNFQESRCFYVVLKD 2158

Query: 523  GCREDFSYRKCLENFVKEKHAAVAESFNEKYFKKPQP-RDGGANRNRMEVGTP 368
            G +EDFSYRKCLE+FV++K+A  AESF  KYF+KP+P RD  AN    +   P
Sbjct: 2159 GKKEDFSYRKCLESFVRKKYADTAESFCGKYFRKPRPKRDQIANSGGEQTANP 2211


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  222 bits (566), Expect = 2e-55
 Identities = 122/285 (42%), Positives = 173/285 (60%), Gaps = 19/285 (6%)
 Frame = -2

Query: 1183 EKANTTGQNGKEENGQ-WNQWSEPPKNETVTANNKSAGTWGTSM-AGEHVNQSADSQVWG 1010
            + ++T G + +E+  + W++      +++  + N S G+WG    A E  ++ +      
Sbjct: 1653 KSSDTRGWDSQEKTDKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASEECSRESQDDSST 1712

Query: 1009 SSSVGDQAEKEVQWSQRKEPPAKPFAWNT----------------NKSSRGWGSSNTGDW 878
              S     E  + W Q+K P      W +                N+ S+GWG  N G+W
Sbjct: 1713 QFSQLKPPETSLGWEQQKSPEVS-HGWGSHKESSEQTSSHGWDKKNQGSKGWGG-NAGEW 1770

Query: 877  KN-KGRPNNPQGTPDDQSGWNASGLYTATRQRLDRFTSEEQSALSEVDTIILAIRKIMQQ 701
            KN K RP    G  +D +  N   LYTA+ QRLD FTSEEQ  L++++ I+ +IRK+M Q
Sbjct: 1771 KNRKNRPPKSPGMSNDDA--NLRALYTASGQRLDMFTSEEQDILADIEPIMQSIRKVMHQ 1828

Query: 700  SRDKDGEPLSAEDQAYVLENVFKYHPDKDVKMGSGIDHVMVSTHSSFKDTRCFYVVSTDG 521
            S   DG+PLSAEDQ++VL++VF +HPDK  KMG+GIDH MVS HSSF+++RCFYVV+TDG
Sbjct: 1829 SGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDG 1888

Query: 520  CREDFSYRKCLENFVKEKHAAVAESFNEKYFKKPQPRDGGANRNR 386
             +EDFSYRKCL+NF+K K+  +AE F  KYF+KP+P     NRNR
Sbjct: 1889 HKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRKPRP-----NRNR 1928


>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
            gi|462415343|gb|EMJ20080.1| hypothetical protein
            PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score =  214 bits (546), Expect = 5e-53
 Identities = 132/339 (38%), Positives = 174/339 (51%), Gaps = 55/339 (16%)
 Frame = -2

Query: 1219 QDDPSDSWGGHVEKANTT---GQNGKEENGQW------------------------NQWS 1121
            ++D + +WG H  K NTT   G     EN  W                        + W+
Sbjct: 1511 REDAASAWGKHPAKENTTSTWGTTTASEN-DWCGRGVGHDDSASLSGKKSSVLNTSSVWA 1569

Query: 1120 EPPKNETVT-------ANNKSAGTWGTSMAGEH--------------------VNQSADS 1022
                 E  T       A   +  TWGT+ A E+                     + SA  
Sbjct: 1570 TNTAREDATSAWGKNPAKENTTSTWGTTTASENDWCGREAGKVEPVDLQPTKPQDDSASL 1629

Query: 1021 QVWGS-SSVGDQAEKEVQWSQRKEPPAKPFAWNTNKSSRGWGSSNTGDWKNKGRPNNPQG 845
              W S +  G+  E+  QW Q +    K    N  + +R W SS  G+WKNK RP    G
Sbjct: 1630 SGWDSPTGDGNSGERNHQWGQHRGDQTKK---NRFEGARNWVSS-PGEWKNKNRPPKSPG 1685

Query: 844  TPDDQSGWNASGLYTATRQRLDRFTSEEQSALSEVDTIILAIRKIMQQSRDKDGEPLSAE 665
              +D S   A  LYT TRQRLD FTSEEQ  LS ++ ++ ++R+IM QS   DG+PLS +
Sbjct: 1686 MVNDNSTMGA--LYTVTRQRLDMFTSEEQDVLSNIEPVMRSLRRIMHQSGYNDGDPLSGD 1743

Query: 664  DQAYVLENVFKYHPDKDVKMGSGIDHVMVSTHSSFKDTRCFYVVSTDGCREDFSYRKCLE 485
            DQ++VL+NVF YHPDK  KMG GIDH+ V+ H SF+D+RCF+VVSTDG  EDFSYRKCL+
Sbjct: 1744 DQSFVLDNVFNYHPDKAAKMGCGIDHLTVNRHGSFQDSRCFFVVSTDGRTEDFSYRKCLD 1803

Query: 484  NFVKEKHAAVAESFNEKYFKKPQPRDGGANRNRMEVGTP 368
            N+++EK   +AE+F  KYF     R G   RN   + TP
Sbjct: 1804 NYIREKFPDLAETFIGKYFS----RRGNRERNPTLIQTP 1838


>ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|355521872|gb|AET02326.1| Protein
            DCL [Medicago truncatula]
          Length = 481

 Score =  213 bits (541), Expect = 2e-52
 Identities = 117/292 (40%), Positives = 165/292 (56%), Gaps = 19/292 (6%)
 Frame = -2

Query: 1228 KQPQDDPSDSWGGHVEKANTTGQNGKEENGQWNQ-------WSEPPKNETVT--ANNKSA 1076
            K P++ P   W    E  N+ G+   +EN  W+        W +P   E+    + N+S 
Sbjct: 144  KSPENRP---WDSKNEPNNSFGKPNSQENEPWDSKNESDSSWGKPKSQESQPWDSKNESN 200

Query: 1075 GTWGTSMAGEH--------VNQSADSQVWGS--SSVGDQAEKEVQWSQRKEPPAKPFAWN 926
             +WG   + E+         NQ+A S+ W S  +S   +++K  QW ++     K   + 
Sbjct: 201  SSWGKPKSQENHPWDSKNESNQTAGSRGWDSQVASANSESDKSFQWGKQGRDSFKKNRFE 260

Query: 925  TNKSSRGWGSSNTGDWKNKGRPNNPQGTPDDQSGWNASGLYTATRQRLDRFTSEEQSALS 746
             ++S    G  N GDWKN+ RP  P G                  QR + +T EEQ  + 
Sbjct: 261  GSQS----GGPNAGDWKNRSRPVRPPG------------------QRFELYTPEEQDIMK 298

Query: 745  EVDTIILAIRKIMQQSRDKDGEPLSAEDQAYVLENVFKYHPDKDVKMGSGIDHVMVSTHS 566
            +++ I+ +IR+IMQ     DG+PL+ EDQ YVLENVF++HPDK+ KMG G+DHVMVS HS
Sbjct: 299  DIEPIVQSIRRIMQLQGYNDGDPLANEDQKYVLENVFEHHPDKETKMGVGVDHVMVSKHS 358

Query: 565  SFKDTRCFYVVSTDGCREDFSYRKCLENFVKEKHAAVAESFNEKYFKKPQPR 410
            +F+D+RC YVV  DG +EDFSYRKCLEN V++K+   AESF  KYF+KPQPR
Sbjct: 359  NFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQPR 410


>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
            gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
            subunit [Medicago truncatula]
          Length = 2032

 Score =  213 bits (541), Expect = 2e-52
 Identities = 117/292 (40%), Positives = 165/292 (56%), Gaps = 19/292 (6%)
 Frame = -2

Query: 1228 KQPQDDPSDSWGGHVEKANTTGQNGKEENGQWNQ-------WSEPPKNETVT--ANNKSA 1076
            K P++ P   W    E  N+ G+   +EN  W+        W +P   E+    + N+S 
Sbjct: 1695 KSPENRP---WDSKNEPNNSFGKPNSQENEPWDSKNESDSSWGKPKSQESQPWDSKNESN 1751

Query: 1075 GTWGTSMAGEH--------VNQSADSQVWGS--SSVGDQAEKEVQWSQRKEPPAKPFAWN 926
             +WG   + E+         NQ+A S+ W S  +S   +++K  QW ++     K   + 
Sbjct: 1752 SSWGKPKSQENHPWDSKNESNQTAGSRGWDSQVASANSESDKSFQWGKQGRDSFKKNRFE 1811

Query: 925  TNKSSRGWGSSNTGDWKNKGRPNNPQGTPDDQSGWNASGLYTATRQRLDRFTSEEQSALS 746
             ++S    G  N GDWKN+ RP  P G                  QR + +T EEQ  + 
Sbjct: 1812 GSQS----GGPNAGDWKNRSRPVRPPG------------------QRFELYTPEEQDIMK 1849

Query: 745  EVDTIILAIRKIMQQSRDKDGEPLSAEDQAYVLENVFKYHPDKDVKMGSGIDHVMVSTHS 566
            +++ I+ +IR+IMQ     DG+PL+ EDQ YVLENVF++HPDK+ KMG G+DHVMVS HS
Sbjct: 1850 DIEPIVQSIRRIMQLQGYNDGDPLANEDQKYVLENVFEHHPDKETKMGVGVDHVMVSKHS 1909

Query: 565  SFKDTRCFYVVSTDGCREDFSYRKCLENFVKEKHAAVAESFNEKYFKKPQPR 410
            +F+D+RC YVV  DG +EDFSYRKCLEN V++K+   AESF  KYF+KPQPR
Sbjct: 1910 NFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQPR 1961


>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1991

 Score =  211 bits (536), Expect = 7e-52
 Identities = 119/288 (41%), Positives = 169/288 (58%), Gaps = 13/288 (4%)
 Frame = -2

Query: 1231 QKQPQDDPSDSWGGHVEK---ANTTGQNGKEEN-----GQWNQWSEPPKNETVTANNKSA 1076
            QK P D     WG  +EK    N+ G  G++++     G W Q + P  ++      KS 
Sbjct: 1700 QKSP-DVSQGVWG--LEKPASTNSQGSWGQQKSPEIPQGNWGQQTSPDISQGTWGQQKSP 1756

Query: 1075 ----GTWGTSMAGEHVNQSADSQVWGSSSVGDQAEKEVQWSQRKEPPAKPFAWNTNKSSR 908
                G+WG     +  +Q A    W S S     E+  QW    +   +       +  R
Sbjct: 1757 EMSQGSWGQQKPSD-TSQPATVNQWDSQSEA-AVERHQQWGHNGDSNKR----KRFEGGR 1810

Query: 907  GWGSSNTGDWKNKG-RPNNPQGTPDDQSGWNASGLYTATRQRLDRFTSEEQSALSEVDTI 731
             WG  N G+WK K  RP    G  +D S  + + +YTATRQRLD FTSEEQ  LS ++  
Sbjct: 1811 SWGP-NAGEWKGKNSRPAKSPGMVNDDS--SVAAIYTATRQRLDIFTSEEQDVLSHIEPT 1867

Query: 730  ILAIRKIMQQSRDKDGEPLSAEDQAYVLENVFKYHPDKDVKMGSGIDHVMVSTHSSFKDT 551
            +L+IR+IM QS   DG+ LSAED +++L+ VF +HP+K+ KMGSGID+  V  H SF+++
Sbjct: 1868 MLSIRRIMHQSGYNDGDQLSAEDHSFILDKVFNFHPEKEAKMGSGIDYFTVDRHGSFQES 1927

Query: 550  RCFYVVSTDGCREDFSYRKCLENFVKEKHAAVAESFNEKYFKKPQPRD 407
            RC +V+STDG +EDFSYRKCL+N +KEK+  +AE+FN+KYF +P+PR+
Sbjct: 1928 RCLFVISTDGRKEDFSYRKCLQNMIKEKYPELAEAFNDKYFSRPRPRN 1975


>ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
            gi|561006762|gb|ESW05756.1| hypothetical protein
            PHAVU_011G206900g [Phaseolus vulgaris]
          Length = 2052

 Score =  206 bits (524), Expect = 2e-50
 Identities = 122/288 (42%), Positives = 172/288 (59%), Gaps = 6/288 (2%)
 Frame = -2

Query: 1204 DSWGGH-VEKANTTGQNGKEENGQWNQWSEPPKNETVTANNKSAGTWGTSMAGEH--VNQ 1034
            D W  + VE A+  G + K +   WN  +   +++   A+     + G+     H   NQ
Sbjct: 1770 DEWARNKVETAD--GGSEKLQEDSWNSGNLKSESKVGNASWGKPNSSGSQSWDSHNQSNQ 1827

Query: 1033 SADSQVWGS--SSVGDQAEKEVQWSQRKEPPAKPFAWNTNKSSRGWGSSNTGDWKNKGRP 860
            ++ S+ W S  +S    +EK  QW ++     + F  N  + S+G GS N+GDWKN+ RP
Sbjct: 1828 NSSSRGWESHIASANSDSEKGFQWGKQGR---ESFKKNRFEGSQGRGS-NSGDWKNRNRP 1883

Query: 859  NNPQGTPDDQSGWNASGLYTATRQRLDRFTSEEQSALSEVDTIILAIRKIMQQSRDKDGE 680
                G                  QRLD ++SEEQ  L E++ I+ +IR+IMQQ    DG+
Sbjct: 1884 PRTPG------------------QRLDLYSSEEQDVLKEIEPIMQSIRRIMQQQGYNDGD 1925

Query: 679  PLSAEDQAYVLENVFKYHPDKDVKMGSGIDHVMVSTHSSFKDTRCFYVVSTDGCREDFSY 500
            PL+A+DQ +VLENVF++HPDKD KMG+GID+VMV+ HSSF+D+RCFYVV  DG REDFSY
Sbjct: 1926 PLAADDQLFVLENVFEHHPDKDTKMGAGIDYVMVNKHSSFQDSRCFYVVLKDGRREDFSY 1985

Query: 499  RKCLENFVKEKHAAVAESFNEKYFKKPQPRDGGANRNRME-VGTPKAD 359
            RKCL+N++++K+  +AESF  KYF+KP        RNR E   TP+ D
Sbjct: 1986 RKCLDNWIRKKYPELAESFFGKYFRKP--------RNRAEQTATPRGD 2025


>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
          Length = 2054

 Score =  203 bits (517), Expect = 1e-49
 Identities = 110/260 (42%), Positives = 163/260 (62%), Gaps = 4/260 (1%)
 Frame = -2

Query: 1135 WNQWSEPPKNETVTANNKSAGTWGTSMAGEHVNQSADSQVWGS----SSVGDQAEKEVQW 968
            W + +   + +  T +     +W    + E ++Q+ +S  + S    +  G + EK  +W
Sbjct: 1777 WTKDANSSERKEPTDSPVVYNSWEKRTSSE-ISQNVESASFNSWLPRAGDGGEVEKPNEW 1835

Query: 967  SQRKEPPAKPFAWNTNKSSRGWGSSNTGDWKNKGRPNNPQGTPDDQSGWNASGLYTATRQ 788
             ++    +  F  N  ++S GWGS ++GDWK K   N+P   P   +   +  L+T TRQ
Sbjct: 1836 VKK----SGSFKKNHGETSGGWGS-DSGDWKIK--KNHPGKFPRMNNDNTSVRLFTETRQ 1888

Query: 787  RLDRFTSEEQSALSEVDTIILAIRKIMQQSRDKDGEPLSAEDQAYVLENVFKYHPDKDVK 608
            RLD FTSEEQ ALS ++  + +IR+IM +S   DG+P+  EDQ+++++NVF YHPDK  K
Sbjct: 1889 RLDLFTSEEQDALSLIEPTMKSIRRIMHKSGYNDGDPIRPEDQSFIIDNVFNYHPDKAAK 1948

Query: 607  MGSGIDHVMVSTHSSFKDTRCFYVVSTDGCREDFSYRKCLENFVKEKHAAVAESFNEKYF 428
            MGSGIDH+M+S HSSF+D+RC YVVSTDG +EDFSYRKCL N +K +   VA+ F +KYF
Sbjct: 1949 MGSGIDHLMISRHSSFQDSRCLYVVSTDGRKEDFSYRKCLGNLIKSRFPDVADEFLDKYF 2008

Query: 427  KKPQPRDGGANRNRMEVGTP 368
            +KP+P   G N++R+    P
Sbjct: 2009 RKPKP---GGNQDRISTPEP 2025


>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|590569189|ref|XP_007011000.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score =  202 bits (514), Expect = 2e-49
 Identities = 118/281 (41%), Positives = 155/281 (55%), Gaps = 8/281 (2%)
 Frame = -2

Query: 1234 TQKQPQDDPSDSWGGHVEKANTTGQNGKEENGQ----WNQWSEPPKNETVTANNKSAGTW 1067
            T K    D   SWG       T G+  ++ +      W+ W       T T ++ S    
Sbjct: 1506 TFKSNGADTGTSWG-------TMGKESEKPDANDALPWSGWGTQDVIPTKTLDDSSK--- 1555

Query: 1066 GTSMAGEHVNQSADSQVWGSSSVGDQAEKEVQWSQRK----EPPAKPFAWNTNKSSRGWG 899
              S   E       SQ WGS    +Q      W            K   W  ++ SR W 
Sbjct: 1556 --SSGWEQQKSPECSQGWGSLDESNQPASSNGWDTPNGLGSTQSEKQHQWGQSRGSRRWA 1613

Query: 898  SSNTGDWKNKGRPNNPQGTPDDQSGWNASGLYTATRQRLDRFTSEEQSALSEVDTIILAI 719
            S    D   K  P       +D S   A  +YTATRQRLD FTSEEQ  LS+V+ ++ +I
Sbjct: 1614 S----DASKKNHPVKSARVMNDDSSMAA--MYTATRQRLDMFTSEEQDILSDVEPLMQSI 1667

Query: 718  RKIMQQSRDKDGEPLSAEDQAYVLENVFKYHPDKDVKMGSGIDHVMVSTHSSFKDTRCFY 539
            RKIM QS   DG+PLSA DQ+++LENVF +HPDK +KMG+G+D+VMVS HS+F D+RCFY
Sbjct: 1668 RKIMHQSGYNDGDPLSALDQSFILENVFTHHPDKAIKMGAGVDYVMVSKHSNFPDSRCFY 1727

Query: 538  VVSTDGCREDFSYRKCLENFVKEKHAAVAESFNEKYFKKPQ 416
            VVSTDG ++DFSYRKCL+NF+K K+  +A+ F  KYF+KP+
Sbjct: 1728 VVSTDGRKQDFSYRKCLDNFIKGKYPDMADVFIAKYFRKPR 1768


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
            gi|557522591|gb|ESR33958.1| hypothetical protein
            CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score =  201 bits (510), Expect = 7e-49
 Identities = 111/252 (44%), Positives = 151/252 (59%), Gaps = 3/252 (1%)
 Frame = -2

Query: 1102 TVTANNKSAGTWGTSMAGEHVN-QSADSQVWGSSSVGDQAEKEVQ-WSQRKEPPAKPFAW 929
            T  A      +WG     E+ + Q A S  W        +E E+Q W Q ++ P K    
Sbjct: 1626 TENAKGTDDSSWGKQKHTENESSQPASSNAWDLPDATGGSETEMQVWGQSRKEPFK---- 1681

Query: 928  NTNKSSRGWGSSNTGDWKNK-GRPNNPQGTPDDQSGWNASGLYTATRQRLDRFTSEEQSA 752
                 +RGW SS+ G+WK K  RP    G  +D S  NA  +YT TRQRLD FTSEEQ  
Sbjct: 1682 ----KNRGWASSS-GEWKGKKNRPPRSPGVVNDDSTVNA--MYTVTRQRLDMFTSEEQDI 1734

Query: 751  LSEVDTIILAIRKIMQQSRDKDGEPLSAEDQAYVLENVFKYHPDKDVKMGSGIDHVMVST 572
            LS+V+ I+ +IR+IM QS   DG+ LSA+D++++ +NVF YHPDK +KMG+GIDH  V  
Sbjct: 1735 LSDVEPIMRSIRRIMHQSGYNDGDRLSADDKSFIFDNVFNYHPDKAMKMGAGIDHFKVDK 1794

Query: 571  HSSFKDTRCFYVVSTDGCREDFSYRKCLENFVKEKHAAVAESFNEKYFKKPQPRDGGANR 392
            H SF+D+RC +VVSTDG ++DFSYRKCLE+F++ K+    + F  KYF++P+    G NR
Sbjct: 1795 HGSFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPEFVDEFIGKYFRRPR---SGGNR 1851

Query: 391  NRMEVGTPKADT 356
                   P+  T
Sbjct: 1852 EPSLPPVPEEKT 1863


>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
            sinensis]
          Length = 1865

 Score =  200 bits (509), Expect = 9e-49
 Identities = 111/252 (44%), Positives = 151/252 (59%), Gaps = 3/252 (1%)
 Frame = -2

Query: 1102 TVTANNKSAGTWGTSMAGEHVN-QSADSQVWGSSSVGDQAEKEVQ-WSQRKEPPAKPFAW 929
            T  A      +WG     E+ + Q A S  W        +E E+Q W Q ++ P K    
Sbjct: 1624 TENAKGTDDSSWGKQKHTENESPQPASSNAWDLPDATGGSETEMQVWGQSRKEPFK---- 1679

Query: 928  NTNKSSRGWGSSNTGDWKNK-GRPNNPQGTPDDQSGWNASGLYTATRQRLDRFTSEEQSA 752
                 +RGW SS+ G+WK K  RP    G  +D S  NA  +YT TRQRLD FTSEEQ  
Sbjct: 1680 ----KNRGWASSS-GEWKGKKNRPPRSPGVVNDDSTVNA--MYTVTRQRLDMFTSEEQDI 1732

Query: 751  LSEVDTIILAIRKIMQQSRDKDGEPLSAEDQAYVLENVFKYHPDKDVKMGSGIDHVMVST 572
            LS V+ I+ +IR+IM QS   DG+ LSA+D++++ +NVF YHPDK +KMG+GIDH  V  
Sbjct: 1733 LSHVEPIMRSIRRIMHQSGYNDGDRLSADDKSFIFDNVFNYHPDKAMKMGAGIDHFKVDK 1792

Query: 571  HSSFKDTRCFYVVSTDGCREDFSYRKCLENFVKEKHAAVAESFNEKYFKKPQPRDGGANR 392
            H SF+D+RC +VVSTDG ++DFSYRKCLE+F++ K+  + + F  KYF++P+    G NR
Sbjct: 1793 HGSFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPDLVDEFIGKYFRRPR---SGGNR 1849

Query: 391  NRMEVGTPKADT 356
                   P+  T
Sbjct: 1850 EPSLPPVPEEKT 1861


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2020

 Score =  200 bits (509), Expect = 9e-49
 Identities = 124/313 (39%), Positives = 172/313 (54%), Gaps = 30/313 (9%)
 Frame = -2

Query: 1207 SDSWG----GHVEKANT-TGQNGKEENGQW--------NQWSEPPKNETVTANNKSAG-- 1073
            +DSWG       +K N+  G  G+     W        +  SE P+ +   + N  A   
Sbjct: 1724 NDSWGLGKLNDTQKDNSGCGAWGENSGSAWVRNKAETIDGGSEKPQEDAWNSGNWKAESK 1783

Query: 1072 ----TWGTSMAGE--------HVNQSADSQVWGS--SSVGDQAEKEVQWSQRKEPPAKPF 935
                TWG   + E          NQ++ SQ W S  +S   + EK  QW + ++     F
Sbjct: 1784 VGNTTWGKPKSSESHAWDSHNQSNQNSSSQGWESHIASANSENEKGFQWGKGRDS----F 1839

Query: 934  AWNTNKSSRGWGSSNTGDWKNKGRPNNPQGTPDDQSGWNASGLYTATRQRLDRFTSEEQS 755
              N  + S+G GS N GDWKN+ RP    G                  QRLD ++SEEQ 
Sbjct: 1840 KKNRFEGSQGRGS-NAGDWKNRNRPPRAPG------------------QRLDIYSSEEQD 1880

Query: 754  ALSEVDTIILAIRKIMQQSRDKDGEPLSAEDQAYVLENVFKYHPDKDVKMGSGIDHVMVS 575
             L +++ I+ +IR+IMQQ    DG+PL+AEDQ +VLENVF++HPDK+ KMG+GID+VMV+
Sbjct: 1881 VLKDIEPIMQSIRRIMQQQGYSDGDPLAAEDQLFVLENVFEHHPDKETKMGAGIDYVMVN 1940

Query: 574  THSSFKDTRCFYVVSTDGCREDFSYRKCLENFVKEKHAAVAESFNEKYFKKPQPR-DGGA 398
             HSSF+++RCFYVV  DG  +DFSYRKCL N++ +K+  +AESF  KYF+KP+ R D  A
Sbjct: 1941 KHSSFQESRCFYVVCKDGQSKDFSYRKCLANYISKKYPDLAESFLGKYFRKPRARGDQTA 2000

Query: 397  NRNRMEVGTPKAD 359
                 +  TP  D
Sbjct: 2001 TLGGDQTATPAQD 2013


>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2082

 Score =  199 bits (507), Expect = 2e-48
 Identities = 121/306 (39%), Positives = 171/306 (55%), Gaps = 22/306 (7%)
 Frame = -2

Query: 1207 SDSWGGHVEKANTTGQNG-----KEENGQWNQWSEPPKNETVTANNKSA------GTWGT 1061
            +DSWG    + +T  +N      + +    +  SE P+ +   + N  A       +WG 
Sbjct: 1774 NDSWGSGKLEDDTQKENSGSAWVRNKAETIDGGSEKPQEDAWNSGNWKAESKVGNASWGK 1833

Query: 1060 SMAGE--------HVNQSADSQVWGS--SSVGDQAEKEVQWSQRKEPPAKPFAWNTNKSS 911
              + E          NQ++ SQ W S  +S   ++EK  QW ++     K    N  + S
Sbjct: 1834 PKSSESQAWDSHNQSNQNSSSQGWESHIASANSESEKGFQWGKQGRDSFKK---NRFEGS 1890

Query: 910  RGWGSSNTGDWKNKGRPNNPQGTPDDQSGWNASGLYTATRQRLDRFTSEEQSALSEVDTI 731
            +G GS N GDWKN+ RP    G                  QRLD ++S EQ  L +++ I
Sbjct: 1891 QGRGS-NAGDWKNRNRPPRAPG------------------QRLDIYSSGEQDVLKDIEPI 1931

Query: 730  ILAIRKIMQQSRDKDGEPLSAEDQAYVLENVFKYHPDKDVKMGSGIDHVMVSTHSSFKDT 551
            + +IR+IMQQ    DG+PL+AEDQ +VLENVF++HPDK+ KMG+GID+VMV+ HSSF+++
Sbjct: 1932 MQSIRRIMQQQGYNDGDPLAAEDQLFVLENVFEHHPDKETKMGTGIDYVMVNKHSSFQES 1991

Query: 550  RCFYVVSTDGCREDFSYRKCLENFVKEKHAAVAESFNEKYFKKPQPR-DGGANRNRMEVG 374
            RCFYVV  DG  +DFSYRKCL N++ +K+  +AESF  KYF+KP+ R D  A   R E  
Sbjct: 1992 RCFYVVCKDGESKDFSYRKCLANYISKKYPDLAESFLGKYFRKPRARGDQTATPGRDEAA 2051

Query: 373  TPKADT 356
            TP   T
Sbjct: 2052 TPGEQT 2057


>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
          Length = 1902

 Score =  197 bits (501), Expect = 8e-48
 Identities = 127/333 (38%), Positives = 177/333 (53%), Gaps = 59/333 (17%)
 Frame = -2

Query: 1234 TQKQPQDDPSDSWGGHVE-----KANTTG-------QNGKEEN-GQWN----------QW 1124
            T K   D  S SWG   E     K+N          ++ KEE    W+           W
Sbjct: 1550 TGKALVDGVSSSWGSQKEDRPQPKSNDRSVGDGNFDKDAKEEGLSSWDAKKVERKTQSSW 1609

Query: 1123 SEPPKNETVTANNKSAGTWGTSMAGEHVNQSADSQVWGS--SSVGDQAEKEVQWSQ---- 962
             +P  +E+  +   SA  WG+  +    NQ   S  WGS  ++ G  +EK+  W +    
Sbjct: 1610 GQP--SESKNSAQSSADHWGSDKS----NQPGKSSGWGSEDTNAGKDSEKQDSWGKSNVS 1663

Query: 961  --RKEPPAK---------PFA------WNTNK--SSRGWGSSNTGDWKNKGRPNNPQGT- 842
              +KE   K         P+       WN  +    RGWGSSNTG+WK++   N  Q   
Sbjct: 1664 TWKKESGEKLHGSDDSQSPWGQPGGSGWNKKQPEGGRGWGSSNTGEWKSRKNQNQNQNQN 1723

Query: 841  -------PDDQSGWNASGLYTATRQRLDRFTSEEQSALSEVDTIILAIRKIMQQSRDKDG 683
                   P+D S   A    TATR+R+D F +EE+  LSEV++++ +IR+IM QS   DG
Sbjct: 1724 QNRPPRGPNDDSPRVA---LTATRKRMDEFPTEEKDVLSEVESLMQSIRRIMHQSGCVDG 1780

Query: 682  EPLSAEDQAYVLENVFKYHPDKDVKMGSGIDHVMVSTHSSFKDTRCFYVVSTDGCREDFS 503
            EPL  +DQ Y+++N+  YHPDK  K+G+G+D + V  HS+F+++RCFYVVSTDG   DFS
Sbjct: 1781 EPLLPDDQTYLIDNILNYHPDKAAKIGAGVDFITVKKHSNFQESRCFYVVSTDGKDTDFS 1840

Query: 502  YRKCLENFVKEKHAAVAESFNEKYFK---KPQP 413
            Y KC+E FVK K+ +VAESF  KYF+   +PQP
Sbjct: 1841 YIKCIETFVKGKYPSVAESFTSKYFRRSQRPQP 1873


>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1 [Solanum lycopersicum]
          Length = 1632

 Score =  192 bits (487), Expect = 3e-46
 Identities = 116/285 (40%), Positives = 157/285 (55%), Gaps = 16/285 (5%)
 Frame = -2

Query: 1219 QDDPSDSWGGHV-EKANTTGQNGK-EENGQWNQWS-----------EPPKNETVTANNKS 1079
            Q D   +WG  V E  N   Q+G  E++G W+ W            EP +  + ++  K+
Sbjct: 1352 QSDSWSAWGKKVDEPENNRQQSGSGEQSGSWSSWGKKVEKDGGSWDEPKQLNSESSWGKA 1411

Query: 1078 AGTWGTSMAGEHVNQSADSQV--WGSSSVGDQAEKEVQWSQRKEPPAKPFAWNTNKSSRG 905
                G   A    N+  D  V  W SSSV    +K        +       W      R 
Sbjct: 1412 PNGGGLGSATAEGNKRLDQSVNDW-SSSVSRDGQKXTNTXXLYKK------WWLEFFKRW 1464

Query: 904  WGSSNTG-DWKNKGRPNNPQGTPDDQSGWNASGLYTATRQRLDRFTSEEQSALSEVDTII 728
            W   + G  WKN    N P  + DD    N  G +TATRQ++D FT+EEQ  +S+VD I+
Sbjct: 1465 WLELSEGWQWKN----NRPARSADDS---NRGGHFTATRQKIDLFTAEEQEIISDVDPIM 1517

Query: 727  LAIRKIMQQSRDKDGEPLSAEDQAYVLENVFKYHPDKDVKMGSGIDHVMVSTHSSFKDTR 548
            L +R           +PLSA+DQ+Y+++ V  YHPDK VKMG+G+D++ VS H++F+DTR
Sbjct: 1518 LKVRS----------DPLSADDQSYIIDTVLNYHPDKAVKMGAGLDYITVSKHTNFQDTR 1567

Query: 547  CFYVVSTDGCREDFSYRKCLENFVKEKHAAVAESFNEKYFKKPQP 413
            CFYVVSTDG ++DFS RKCLENFV+ K+   AE+FNEKYFKKP P
Sbjct: 1568 CFYVVSTDGAKQDFSTRKCLENFVRSKYPDKAETFNEKYFKKPPP 1612