BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00018427
         (1284 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007041032.1| Plastid transcriptionally active 9, putative...   257   9e-66
ref|XP_006468403.1| PREDICTED: protein OSB2, chloroplastic-like ...   244   5e-62
ref|XP_006468402.1| PREDICTED: protein OSB2, chloroplastic-like ...   244   6e-62
ref|XP_006468401.1| PREDICTED: protein OSB2, chloroplastic-like ...   243   1e-61
ref|XP_006448788.1| hypothetical protein CICLE_v10015693mg [Citr...   243   2e-61
ref|XP_006448787.1| hypothetical protein CICLE_v10015693mg [Citr...   241   4e-61
ref|NP_567593.1| plastid transcriptionally active 9 [Arabidopsis...   222   2e-55
ref|NP_001031674.1| plastid transcriptionally active 9 [Arabidop...   222   3e-55
dbj|BAC42861.1| unknown protein [Arabidopsis thaliana]                221   7e-55
ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arab...   218   5e-54
ref|XP_006282647.1| hypothetical protein CARUB_v10004988mg, part...   215   4e-53
ref|XP_006413910.1| hypothetical protein EUTSA_v10025547mg [Eutr...   214   5e-53
gb|AAM61481.1| unknown [Arabidopsis thaliana]                         204   5e-50
ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|33200777...   204   9e-50
ref|NP_564370.1| protein OSB4 [Arabidopsis thaliana] gi|75334520...   204   9e-50
gb|AAM63642.1| unknown [Arabidopsis thaliana]                         202   2e-49
ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana] gi|75328911...   202   3e-49
gb|AAC79142.1| hypothetical protein [Arabidopsis thaliana]            202   3e-49
ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arab...   201   6e-49
ref|XP_002893671.1| single-stranded DNA binding protein [Arabido...   199   2e-48

>ref|XP_007041032.1| Plastid transcriptionally active 9, putative [Theobroma cacao]
            gi|508704967|gb|EOX96863.1| Plastid transcriptionally
            active 9, putative [Theobroma cacao]
          Length = 344

 Score =  257 bits (656), Expect = 9e-66
 Identities = 145/339 (42%), Positives = 196/339 (57%), Gaps = 28/339 (8%)
 Frame = -1

Query: 1110 MNHLTKPFIKTLSSQSTINRILNRVLVLQKSQHYSTSPK--DPESVSKSR-----DWPRP 952
            MN LT+   K  +S++   +  +R  +LQ     +TS +   PE+ S S+     +WPRP
Sbjct: 1    MNSLTRTLAKIATSEA---QQASRRWILQSFSTSTTSKRLTQPENPSDSKHSAPKEWPRP 57

Query: 951  NTIPWQSKVANLVNLVGSVARPIKFQESDDGKFWAGTTISQGEADGSTAIEIPIIFEGHL 772
              IP+QSKVAN V+L G +  P++F+ + DGKFWAGT I+Q  +  S  + IPIIFEG L
Sbjct: 58   GEIPYQSKVANSVSLSGYIHMPVQFEAASDGKFWAGTVIAQNPSSDSPPLWIPIIFEGDL 117

Query: 771  AQTAACHLKERDLIHIAGHFSEDPPQISLHCGHCIGQVMVHQISFIEETPQAKERYYSRL 592
            A  AACHLKE D ++I G  S DPP  +        QVMV  I+F++E+P   +   S  
Sbjct: 118  AHIAACHLKENDHVYIDGQLSADPPSSNATHAQANVQVMVRTINFVDESPPMTKGIASHK 177

Query: 591  K--------------QVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPL 454
            +              +   N WRDL  NP +W DYR++KLNGLVKPK+PDFK KDSG  L
Sbjct: 178  QEGTLSHSAGTKQGTETAPNPWRDLLDNPKEWQDYRENKLNGLVKPKYPDFKHKDSGLAL 237

Query: 453  WLNTAPKWAISELPTTSELSIASEEEGSSLSNAQKRPEGSCWRKESEEASWKNLTQNPDK 274
            WL++APKW +SEL            EG       ++P+     +   + SWK+L +NP+K
Sbjct: 238  WLDSAPKWVLSEL------------EGLQFDVPIQKPKQ--LNRHKGDGSWKDLVENPNK 283

Query: 273  WWDVRSDKLFN-------HDFEHKDTGKALWLSSSPDWV 178
            WWD R DK FN        DF+HK+TG+ALWL+ SP WV
Sbjct: 284  WWDNRLDK-FNGKINERYPDFKHKETGEALWLTDSPVWV 321



 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -1

Query: 630 ETPQAKERYYSRLKQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLW 451
           + P  K +  +R K   D  W+DL  NP++W D R DK NG +  ++PDFK K++G+ LW
Sbjct: 256 DVPIQKPKQLNRHKG--DGSWKDLVENPNKWWDNRLDKFNGKINERYPDFKHKETGEALW 313

Query: 450 LNTAPKWAISELPT-TSELSIASEEEG 373
           L  +P W   +LP+ TS+   A+ E G
Sbjct: 314 LTDSPVWVEPKLPSLTSKNGTANHERG 340


>ref|XP_006468403.1| PREDICTED: protein OSB2, chloroplastic-like isoform X3 [Citrus
            sinensis]
          Length = 339

 Score =  244 bits (624), Expect = 5e-62
 Identities = 137/323 (42%), Positives = 181/323 (56%), Gaps = 25/323 (7%)
 Frame = -1

Query: 1071 SQSTINRIL-----NRVLVLQKSQHYSTSPKDPESVSKSRDWPRPNTIPWQSKVANLVNL 907
            SQ+T+ RI+     +         H  T      + SK   WP+P+ IP+Q KVAN VNL
Sbjct: 15   SQTTVKRIILYSPAHFTRPFSSRAHQFTKATTKTTTSKDVVWPKPSEIPFQVKVANSVNL 74

Query: 906  VGSVARPIKFQESDDGKFWAGTTISQGEADGSTAIEIPIIFEGHLAQTAACHLKERDLIH 727
            +G V  P++FQ S DGK WAGT I Q  A  S ++ IPI+FEG LA  A+ HLK+ D +H
Sbjct: 75   IGHVDAPVQFQTSSDGKHWAGTVIVQHAA--SHSLWIPILFEGDLAHIASSHLKKDDHVH 132

Query: 726  IAGHFSEDPPQISLHCGHCIGQVMVHQISFIEETPQAKERYYSRLKQVLD---------- 577
            IAG  + DPP I    G    QVMVH ++ IE T Q +  + S+ ++             
Sbjct: 133  IAGQLTADPPAIE---GQANVQVMVHSLNLIEPTSQKRMFFVSKKQEAATVDHSVKISSS 189

Query: 576  --------NFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAIS 421
                    + WRDL  NP QW DYR DKL GLVKP++PDFKRKD   PLWLN+AP W +S
Sbjct: 190  KKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLS 249

Query: 420  ELPTTSELSIASEEEGSSLSNAQKRPEGSCWRKESEEASWKNLTQNPDKWWDVRSDKLFN 241
            EL       +  ++    L +  ++   +  +K   +  WK+L +NPDKWWD R DK   
Sbjct: 250  ELE-----GVVFDKSKPVLDDQTRK--SNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSE 302

Query: 240  H--DFEHKDTGKALWLSSSPDWV 178
               DF+HK+TGK LWL+ SP WV
Sbjct: 303  KGPDFKHKETGKPLWLNYSPAWV 325



 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 29/60 (48%), Positives = 39/60 (65%)
 Frame = -1

Query: 591 KQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAISELP 412
           K  +D+ W+DL  NP +W D R DK +     K PDFK K++G+PLWLN +P W  S+LP
Sbjct: 275 KSKVDDLWKDLVENPDKWWDNRLDKKS----EKGPDFKHKETGKPLWLNYSPAWVTSQLP 330


>ref|XP_006468402.1| PREDICTED: protein OSB2, chloroplastic-like isoform X2 [Citrus
            sinensis]
          Length = 339

 Score =  244 bits (623), Expect = 6e-62
 Identities = 137/323 (42%), Positives = 181/323 (56%), Gaps = 25/323 (7%)
 Frame = -1

Query: 1071 SQSTINRIL-----NRVLVLQKSQHYSTSPKDPESVSKSRDWPRPNTIPWQSKVANLVNL 907
            SQ+T+ RI+     +         H  T      + SK   WP+P+ IP+Q KVAN VNL
Sbjct: 15   SQTTVKRIILYSPAHFTRPFSSRAHQFTKATTKTTTSKDVVWPKPSEIPFQVKVANSVNL 74

Query: 906  VGSVARPIKFQESDDGKFWAGTTISQGEADGSTAIEIPIIFEGHLAQTAACHLKERDLIH 727
            +G V  P++FQ S DGK WAGT I Q  A  S ++ IPI+FEG LA  A+ HLK+ D +H
Sbjct: 75   IGHVDAPVQFQTSSDGKHWAGTVIVQHAA--SHSLWIPILFEGDLAHIASSHLKKDDHVH 132

Query: 726  IAGHFSEDPPQISLHCGHCIGQVMVHQISFIEETPQAKERYYSRLKQVLD---------- 577
            IAG  + DPP I    G    QVMVH ++ IE T Q +  + S+ ++             
Sbjct: 133  IAGQLTADPPAIE---GQANVQVMVHSLNLIEPTSQKRMFFVSKKQEAATVDHSVKISSS 189

Query: 576  --------NFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAIS 421
                    + WRDL  NP QW DYR DKL GLVKP++PDFKRKD   PLWLN+AP W +S
Sbjct: 190  KKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLS 249

Query: 420  ELPTTSELSIASEEEGSSLSNAQKRPEGSCWRKESEEASWKNLTQNPDKWWDVRSDKLFN 241
            EL       +  ++    L +  ++   +  +K   +  WK+L +NPDKWWD R DK   
Sbjct: 250  ELE-----GVVFDKSKPVLDDQTQK--SNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSE 302

Query: 240  H--DFEHKDTGKALWLSSSPDWV 178
               DF+HK+TGK LWL+ SP WV
Sbjct: 303  KGPDFKHKETGKPLWLNYSPAWV 325



 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 29/60 (48%), Positives = 39/60 (65%)
 Frame = -1

Query: 591 KQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAISELP 412
           K  +D+ W+DL  NP +W D R DK +     K PDFK K++G+PLWLN +P W  S+LP
Sbjct: 275 KSKVDDLWKDLVENPDKWWDNRLDKKS----EKGPDFKHKETGKPLWLNYSPAWVTSQLP 330


>ref|XP_006468401.1| PREDICTED: protein OSB2, chloroplastic-like isoform X1 [Citrus
            sinensis]
          Length = 364

 Score =  243 bits (621), Expect = 1e-61
 Identities = 141/341 (41%), Positives = 185/341 (54%), Gaps = 43/341 (12%)
 Frame = -1

Query: 1071 SQSTINRIL-----NRVLVLQKSQHYSTSPKDPESVSKSRDWPRPNTIPWQSKVANLVNL 907
            SQ+T+ RI+     +         H  T      + SK   WP+P+ IP+Q KVAN VNL
Sbjct: 15   SQTTVKRIILYSPAHFTRPFSSRAHQFTKATTKTTTSKDVVWPKPSEIPFQVKVANSVNL 74

Query: 906  VGSVARPIKFQESDDGKFWAGTTISQGEADGSTAIEIPIIFEGHLAQTAACHLKERDLIH 727
            +G V  P++FQ S DGK WAGT I Q  A  S ++ IPI+FEG LA  A+ HLK+ D +H
Sbjct: 75   IGHVDAPVQFQTSSDGKHWAGTVIVQHAA--SHSLWIPILFEGDLAHIASSHLKKDDHVH 132

Query: 726  IAGHFSEDPPQISLHCGHCIGQVMVHQISFIEETPQAKERYYSRLKQVLD---------- 577
            IAG  + DPP I    G    QVMVH ++ IE T Q +  + S+ ++             
Sbjct: 133  IAGQLTADPPAIE---GQANVQVMVHSLNLIEPTSQKRMFFVSKKQEAATVDHSVKISSS 189

Query: 576  --------NFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAIS 421
                    + WRDL  NP QW DYR DKL GLVKP++PDFKRKD   PLWLN+AP W +S
Sbjct: 190  KKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLS 249

Query: 420  ELP-TTSELSIASEEEGSSLSNAQKRPEGSCW-----------------RKESEEASWKN 295
            EL     + S    ++ +  SN  K+ +G  +                 +K   +  WK+
Sbjct: 250  ELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKD 309

Query: 294  LTQNPDKWWDVRSDKLFNH--DFEHKDTGKALWLSSSPDWV 178
            L +NPDKWWD R DK      DF+HK+TGK LWL+ SP WV
Sbjct: 310  LVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNYSPAWV 350



 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 29/60 (48%), Positives = 39/60 (65%)
 Frame = -1

Query: 591 KQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAISELP 412
           K  +D+ W+DL  NP +W D R DK +     K PDFK K++G+PLWLN +P W  S+LP
Sbjct: 300 KSKVDDLWKDLVENPDKWWDNRLDKKS----EKGPDFKHKETGKPLWLNYSPAWVTSQLP 355


>ref|XP_006448788.1| hypothetical protein CICLE_v10015693mg [Citrus clementina]
            gi|557551399|gb|ESR62028.1| hypothetical protein
            CICLE_v10015693mg [Citrus clementina]
          Length = 339

 Score =  243 bits (619), Expect = 2e-61
 Identities = 136/323 (42%), Positives = 179/323 (55%), Gaps = 25/323 (7%)
 Frame = -1

Query: 1071 SQSTINRIL-----NRVLVLQKSQHYSTSPKDPESVSKSRDWPRPNTIPWQSKVANLVNL 907
            SQ+T+ RI+               H  T      + SK   WP+P+ IP+Q KVAN VNL
Sbjct: 15   SQTTVKRIILYSPARFTRPFSSRAHQFTKATTKTTTSKDVVWPKPSEIPFQVKVANSVNL 74

Query: 906  VGSVARPIKFQESDDGKFWAGTTISQGEADGSTAIEIPIIFEGHLAQTAACHLKERDLIH 727
            +G V  P++FQ S DGK WAGT I Q  A  S ++ IPI+FEG LA  A+ HLK+ D +H
Sbjct: 75   IGHVDAPVQFQTSSDGKHWAGTVIVQHAA--SHSLWIPILFEGDLAHIASSHLKKDDHVH 132

Query: 726  IAGHFSEDPPQISLHCGHCIGQVMVHQISFIEETPQAKERYYSRLKQVLD---------- 577
            IAG  + DPP I    G    QVMVH ++ IE T Q +  + S+ ++             
Sbjct: 133  IAGQLTADPPAIE---GQANVQVMVHSLNLIEPTSQKRMFFVSKKQEAATVDHSVKISSS 189

Query: 576  --------NFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAIS 421
                    + WRDL  NP QW DYR DKL GL KP++PDFKRKD   PLWLN+AP W +S
Sbjct: 190  KKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLAKPRYPDFKRKDGTLPLWLNSAPDWVLS 249

Query: 420  ELPTTSELSIASEEEGSSLSNAQKRPEGSCWRKESEEASWKNLTQNPDKWWDVRSDKLFN 241
            EL       +  ++    L +  ++   +  +K   +  WK+L +NPDKWWD R DK   
Sbjct: 250  ELE-----GVVFDKSKPVLDDQTRK--SNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSE 302

Query: 240  H--DFEHKDTGKALWLSSSPDWV 178
               DF+HK+TGK LWL+ SP WV
Sbjct: 303  KGPDFKHKETGKPLWLNYSPAWV 325



 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 29/60 (48%), Positives = 39/60 (65%)
 Frame = -1

Query: 591 KQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAISELP 412
           K  +D+ W+DL  NP +W D R DK +     K PDFK K++G+PLWLN +P W  S+LP
Sbjct: 275 KSKVDDLWKDLVENPDKWWDNRLDKKS----EKGPDFKHKETGKPLWLNYSPAWVRSQLP 330


>ref|XP_006448787.1| hypothetical protein CICLE_v10015693mg [Citrus clementina]
            gi|557551398|gb|ESR62027.1| hypothetical protein
            CICLE_v10015693mg [Citrus clementina]
          Length = 364

 Score =  241 bits (616), Expect = 4e-61
 Identities = 140/341 (41%), Positives = 183/341 (53%), Gaps = 43/341 (12%)
 Frame = -1

Query: 1071 SQSTINRIL-----NRVLVLQKSQHYSTSPKDPESVSKSRDWPRPNTIPWQSKVANLVNL 907
            SQ+T+ RI+               H  T      + SK   WP+P+ IP+Q KVAN VNL
Sbjct: 15   SQTTVKRIILYSPARFTRPFSSRAHQFTKATTKTTTSKDVVWPKPSEIPFQVKVANSVNL 74

Query: 906  VGSVARPIKFQESDDGKFWAGTTISQGEADGSTAIEIPIIFEGHLAQTAACHLKERDLIH 727
            +G V  P++FQ S DGK WAGT I Q  A  S ++ IPI+FEG LA  A+ HLK+ D +H
Sbjct: 75   IGHVDAPVQFQTSSDGKHWAGTVIVQHAA--SHSLWIPILFEGDLAHIASSHLKKDDHVH 132

Query: 726  IAGHFSEDPPQISLHCGHCIGQVMVHQISFIEETPQAKERYYSRLKQVLD---------- 577
            IAG  + DPP I    G    QVMVH ++ IE T Q +  + S+ ++             
Sbjct: 133  IAGQLTADPPAIE---GQANVQVMVHSLNLIEPTSQKRMFFVSKKQEAATVDHSVKISSS 189

Query: 576  --------NFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAIS 421
                    + WRDL  NP QW DYR DKL GL KP++PDFKRKD   PLWLN+AP W +S
Sbjct: 190  KKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLAKPRYPDFKRKDGTLPLWLNSAPDWVLS 249

Query: 420  ELP-TTSELSIASEEEGSSLSNAQKRPEGSCW-----------------RKESEEASWKN 295
            EL     + S    ++ +  SN  K+ +G  +                 +K   +  WK+
Sbjct: 250  ELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKD 309

Query: 294  LTQNPDKWWDVRSDKLFNH--DFEHKDTGKALWLSSSPDWV 178
            L +NPDKWWD R DK      DF+HK+TGK LWL+ SP WV
Sbjct: 310  LVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNYSPAWV 350



 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 29/60 (48%), Positives = 39/60 (65%)
 Frame = -1

Query: 591 KQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAISELP 412
           K  +D+ W+DL  NP +W D R DK +     K PDFK K++G+PLWLN +P W  S+LP
Sbjct: 300 KSKVDDLWKDLVENPDKWWDNRLDKKS----EKGPDFKHKETGKPLWLNYSPAWVRSQLP 355


>ref|NP_567593.1| plastid transcriptionally active 9 [Arabidopsis thaliana]
            gi|259517764|sp|Q8GXH3.2|OSB2_ARATH RecName: Full=Protein
            OSB2, chloroplastic; AltName: Full=Organellar
            single-stranded DNA-binding protein 2; AltName:
            Full=Protein FLORAL ABSCISSION ASSOCIATED; AltName:
            Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 9; Flags:
            Precursor gi|2827655|emb|CAA16609.1| hypothetical protein
            [Arabidopsis thaliana] gi|7268796|emb|CAB79001.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|111074390|gb|ABH04568.1| At4g20010 [Arabidopsis
            thaliana] gi|332658860|gb|AEE84260.1| plastid
            transcriptionally active 9 [Arabidopsis thaliana]
          Length = 371

 Score =  222 bits (566), Expect = 2e-55
 Identities = 134/355 (37%), Positives = 188/355 (52%), Gaps = 36/355 (10%)
 Frame = -1

Query: 1134 PRQVTQTTMNHLTKPFIKTLSSQSTINRILNRVLVLQKSQHYSTSPKDPESVSKSR---- 967
            PR    TT   +T P I+  ++ +   +  N     ++ Q      K PE+V+  +    
Sbjct: 19   PRASEITTGKRITSPQIRLYTAAAVGGKTGNG----ERKQRAKAPAKTPEAVTPVKPLEI 74

Query: 966  ---------DWPRPNTIPWQSKVANLVNLVGSVARPIKFQESDDGKFWAGTTISQGEADG 814
                     + PRPN I ++S+VAN VNL+G V +P++F+ S DGKFWAGT ISQ  A  
Sbjct: 75   ASVTATTENELPRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASD 134

Query: 813  STAIEIPIIFEGHLAQTAACHLKERDLIHIAGHFSEDPPQISLHCGHCIGQVMVHQISFI 634
            S+   IPIIFEG LA+TAA ++ + D IH++G    D P  ++       QV+V  ++FI
Sbjct: 135  SSGFWIPIIFEGDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFI 194

Query: 633  ----------------EETPQAKERYYSRLKQ--VLD---NFWRDLCGNPSQWTDYRKDK 517
                            E+     ++  +R KQ  V+D   + W  L  NP +W D+R++K
Sbjct: 195  QPMSPSPSPFMVMSSSEKEESGIKKQPARAKQDIVIDEASDSWNHLIENPKEWWDHRENK 254

Query: 516  LNGLVKPKHPDFKRKDSGQPLWLNTAPKWAISELPTTSELSIASEEEGSSLSNAQKRPEG 337
            +NGLVKP+HPDFK KDS   LWLN AP W + +L                L      P+ 
Sbjct: 255  VNGLVKPRHPDFKSKDSSFSLWLNKAPNWVLPKL--------------EGLEFDVLVPKA 300

Query: 336  SCWRKESEEASWKNLTQNPDKWWDVRSDK--LFNHDFEHKDTGKALWLSSSPDWV 178
               ++   E SWK+L QNPDKWWD R DK      DF+HK+TG+ALWL+ SP WV
Sbjct: 301  RVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNESPTWV 355



 Score = 61.6 bits (148), Expect = 7e-07
 Identities = 30/68 (44%), Positives = 40/68 (58%)
 Frame = -1

Query: 615 KERYYSRLKQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAP 436
           K R   +LK   +  W+DL  NP +W D R DK N     K PDFK K++G+ LWLN +P
Sbjct: 299 KARVVKQLKG--EESWKDLVQNPDKWWDNRIDKRNA----KAPDFKHKETGEALWLNESP 352

Query: 435 KWAISELP 412
            W + +LP
Sbjct: 353 TWVLPKLP 360


>ref|NP_001031674.1| plastid transcriptionally active 9 [Arabidopsis thaliana]
            gi|332658861|gb|AEE84261.1| plastid transcriptionally
            active 9 [Arabidopsis thaliana]
          Length = 371

 Score =  222 bits (565), Expect = 3e-55
 Identities = 133/355 (37%), Positives = 187/355 (52%), Gaps = 36/355 (10%)
 Frame = -1

Query: 1134 PRQVTQTTMNHLTKPFIKTLSSQSTINRILNRVLVLQKSQHYSTSPKDPESVSKSR---- 967
            PR    TT   +T P I+  ++ +   +  N     ++ Q      K PE+V+  +    
Sbjct: 19   PRASEITTGKRITSPQIRLYTAAAVGGKTGNG----ERKQRAKAPAKTPEAVTPVKPLEI 74

Query: 966  ---------DWPRPNTIPWQSKVANLVNLVGSVARPIKFQESDDGKFWAGTTISQGEADG 814
                     + PRPN I ++S+VAN VNL+G V +P++F+ S DGKFWAGT ISQ  A  
Sbjct: 75   ASVTATTENELPRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASD 134

Query: 813  STAIEIPIIFEGHLAQTAACHLKERDLIHIAGHFSEDPPQISLHCGHCIGQVMVHQISFI 634
            S+   IPIIFEG LA+TAA ++ + D IH++G    D P  ++       QV+V  ++FI
Sbjct: 135  SSGFWIPIIFEGDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFI 194

Query: 633  ------------------EETPQAKERYYSRLKQVLD---NFWRDLCGNPSQWTDYRKDK 517
                              EE+   K+   ++   V+D   + W  L  NP +W D+R++K
Sbjct: 195  QPMSPSPSPFMVMSSSEKEESGIKKQPGIAKQDIVIDEASDSWNHLIENPKEWWDHRENK 254

Query: 516  LNGLVKPKHPDFKRKDSGQPLWLNTAPKWAISELPTTSELSIASEEEGSSLSNAQKRPEG 337
            +NGLVKP+HPDFK KDS   LWLN AP W + +L                L      P+ 
Sbjct: 255  VNGLVKPRHPDFKSKDSSFSLWLNKAPNWVLPKL--------------EGLEFDVLVPKA 300

Query: 336  SCWRKESEEASWKNLTQNPDKWWDVRSDK--LFNHDFEHKDTGKALWLSSSPDWV 178
               ++   E SWK+L QNPDKWWD R DK      DF+HK+TG+ALWL+ SP WV
Sbjct: 301  RVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNESPTWV 355



 Score = 61.6 bits (148), Expect = 7e-07
 Identities = 30/68 (44%), Positives = 40/68 (58%)
 Frame = -1

Query: 615 KERYYSRLKQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAP 436
           K R   +LK   +  W+DL  NP +W D R DK N     K PDFK K++G+ LWLN +P
Sbjct: 299 KARVVKQLKG--EESWKDLVQNPDKWWDNRIDKRNA----KAPDFKHKETGEALWLNESP 352

Query: 435 KWAISELP 412
            W + +LP
Sbjct: 353 TWVLPKLP 360


>dbj|BAC42861.1| unknown protein [Arabidopsis thaliana]
          Length = 371

 Score =  221 bits (562), Expect = 7e-55
 Identities = 133/355 (37%), Positives = 187/355 (52%), Gaps = 36/355 (10%)
 Frame = -1

Query: 1134 PRQVTQTTMNHLTKPFIKTLSSQSTINRILNRVLVLQKSQHYSTSPKDPESVSKSR---- 967
            PR    TT   +T P I+  ++ +   +  N     ++ Q      K PE+V+  +    
Sbjct: 19   PRASEITTGKRITSPQIRLYTAAAVGGKTGNG----ERKQRAKAPAKTPEAVTPVKPLEI 74

Query: 966  ---------DWPRPNTIPWQSKVANLVNLVGSVARPIKFQESDDGKFWAGTTISQGEADG 814
                     + PRPN I ++S+ AN VNL+G V +P++F+ S DGKFWAGT ISQ  A  
Sbjct: 75   ASVTATTENELPRPNEIAYESEAANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASD 134

Query: 813  STAIEIPIIFEGHLAQTAACHLKERDLIHIAGHFSEDPPQISLHCGHCIGQVMVHQISFI 634
            S+   IPIIFEG LA+TAA ++ + D IH++G    D P  ++       QV+V  ++FI
Sbjct: 135  SSGFWIPIIFEGDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFI 194

Query: 633  ----------------EETPQAKERYYSRLKQ--VLD---NFWRDLCGNPSQWTDYRKDK 517
                            E+     ++  +R KQ  V+D   + W  L  NP +W D+R++K
Sbjct: 195  QPMSPSPSPFMVMSSSEKEESGIKKQPARAKQDIVIDEASDSWNHLIENPKEWWDHRENK 254

Query: 516  LNGLVKPKHPDFKRKDSGQPLWLNTAPKWAISELPTTSELSIASEEEGSSLSNAQKRPEG 337
            +NGLVKP+HPDFK KDS   LWLN AP W + +L                L      P+ 
Sbjct: 255  VNGLVKPRHPDFKSKDSSFSLWLNKAPNWVLPKL--------------EGLEFDVLVPKA 300

Query: 336  SCWRKESEEASWKNLTQNPDKWWDVRSDK--LFNHDFEHKDTGKALWLSSSPDWV 178
               ++   E SWK+L QNPDKWWD R DK      DF+HK+TG+ALWL+ SP WV
Sbjct: 301  RVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNESPTWV 355



 Score = 61.6 bits (148), Expect = 7e-07
 Identities = 30/68 (44%), Positives = 40/68 (58%)
 Frame = -1

Query: 615 KERYYSRLKQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAP 436
           K R   +LK   +  W+DL  NP +W D R DK N     K PDFK K++G+ LWLN +P
Sbjct: 299 KARVVKQLKG--EESWKDLVQNPDKWWDNRIDKRNA----KAPDFKHKETGEALWLNESP 352

Query: 435 KWAISELP 412
            W + +LP
Sbjct: 353 TWVLPKLP 360


>ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arabidopsis lyrata subsp.
            lyrata] gi|297315788|gb|EFH46211.1| hypothetical protein
            ARALYDRAFT_492872 [Arabidopsis lyrata subsp. lyrata]
          Length = 365

 Score =  218 bits (555), Expect = 5e-54
 Identities = 129/340 (37%), Positives = 182/340 (53%), Gaps = 27/340 (7%)
 Frame = -1

Query: 1116 TTMNHLTKPFIKTLSSQ----STINRILNRVLVLQKSQHYSTSPKDPESVSKSRDWPRPN 949
            TT   +T P I+  ++     ST N +  +     K    + +P     ++      RPN
Sbjct: 25   TTGKRITSPQIRFYTAAAGGGSTGNGVKKQRAKPPKKTPEALTPVKTPEIAPVTATKRPN 84

Query: 948  TIPWQSKVANLVNLVGSVARPIKFQESDDGKFWAGTTISQGEADGSTAIEIPIIFEGHLA 769
             I ++++VAN VNL+G V +P++F+ S DGKFWAGT ISQ  A  S+   IPIIFEG LA
Sbjct: 85   EIAYETEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFEGDLA 144

Query: 768  QTAACHLKERDLIHIAGHFSEDPPQISLHCGHCIGQVMVHQISFI--------------- 634
            +TAA ++ + D IH++G    D P  ++       QV+V  ++FI               
Sbjct: 145  KTAAQNINKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPLMVMSS 204

Query: 633  ---EETPQAKERYYSRLKQVLD---NFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRK 472
               EE+   K+   ++   V+D   + W  L  NP +W D+R++K+NGLVKP+HPDFK K
Sbjct: 205  SEKEESGIKKQPGIAKKDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSK 264

Query: 471  DSGQPLWLNTAPKWAISELPTTSELSIASEEEGSSLSNAQKRPEGSCWRKESEEASWKNL 292
            DS   LWLN AP W + +L                L      P+G   ++   E SWK+L
Sbjct: 265  DSSLSLWLNKAPNWVLPKL--------------EGLKFDVLVPKGRVVKQLKGEESWKDL 310

Query: 291  TQNPDKWWDVRSDK--LFNHDFEHKDTGKALWLSSSPDWV 178
             QNPDKWWD R DK      DF+HK+TG+ALWL+ SP WV
Sbjct: 311  VQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNESPTWV 350



 Score = 61.2 bits (147), Expect = 9e-07
 Identities = 30/68 (44%), Positives = 40/68 (58%)
 Frame = -1

Query: 615 KERYYSRLKQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAP 436
           K R   +LK   +  W+DL  NP +W D R DK N     K PDFK K++G+ LWLN +P
Sbjct: 294 KGRVVKQLKG--EESWKDLVQNPDKWWDNRIDKRNA----KAPDFKHKETGEALWLNESP 347

Query: 435 KWAISELP 412
            W + +LP
Sbjct: 348 TWVLPKLP 355


>ref|XP_006282647.1| hypothetical protein CARUB_v10004988mg, partial [Capsella rubella]
            gi|482551352|gb|EOA15545.1| hypothetical protein
            CARUB_v10004988mg, partial [Capsella rubella]
          Length = 394

 Score =  215 bits (547), Expect = 4e-53
 Identities = 122/305 (40%), Positives = 171/305 (56%), Gaps = 23/305 (7%)
 Frame = -1

Query: 1023 KSQHYSTSPKDPE----SVSKSRDWPRPNTIPWQSKVANLVNLVGSVARPIKFQESDDGK 856
            K+    T  K PE    + +   +  RPN I ++++VAN VNL+G V +P++F+ S DGK
Sbjct: 88   KTPEVVTPVKTPEIATVTATTENELGRPNEIAFENEVANWVNLIGFVNQPVQFEASSDGK 147

Query: 855  FWAGTTISQGEADGSTAIEIPIIFEGHLAQTAACHLKERDLIHIAGHFSEDPPQISLHCG 676
            FWAGT ISQ     S A  IPIIFEG LA+TAA ++ + D IH++G    D P  ++   
Sbjct: 148  FWAGTVISQRSGSDSAAFWIPIIFEGDLAKTAARYINKDDQIHVSGKLFIDSPPPNMTYA 207

Query: 675  HCIGQVMVHQISFIEETP-----QAKERYYSRLKQ---------VLD---NFWRDLCGNP 547
                QV+V  ++F++ T       + E+  S +K+         V+D   + W  L  NP
Sbjct: 208  QANVQVLVQNLNFLKPTSPSIVISSSEKEESVIKKHPARAKKDVVMDEASDSWNRLIENP 267

Query: 546  SQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAISELPTTSELSIASEEEGSS 367
             +W D+R++K+NGLVKP+HPDFK KDS   LWLN AP W + +L                
Sbjct: 268  KEWWDHRENKVNGLVKPRHPDFKSKDSSLSLWLNKAPNWVLPKL--------------EG 313

Query: 366  LSNAQKRPEGSCWRKESEEASWKNLTQNPDKWWDVRSDK--LFNHDFEHKDTGKALWLSS 193
            L      P+    ++   E SWK+L QNPDKWWD R DK      DF+HK+TG+ALWL+ 
Sbjct: 314  LEFDVLVPKARIVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNE 373

Query: 192  SPDWV 178
            SP W+
Sbjct: 374  SPTWL 378



 Score = 61.2 bits (147), Expect = 9e-07
 Identities = 30/68 (44%), Positives = 40/68 (58%)
 Frame = -1

Query: 615 KERYYSRLKQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAP 436
           K R   +LK   +  W+DL  NP +W D R DK N     K PDFK K++G+ LWLN +P
Sbjct: 322 KARIVKQLKG--EESWKDLVQNPDKWWDNRIDKRNA----KAPDFKHKETGEALWLNESP 375

Query: 435 KWAISELP 412
            W + +LP
Sbjct: 376 TWLLPKLP 383


>ref|XP_006413910.1| hypothetical protein EUTSA_v10025547mg [Eutrema salsugineum]
           gi|557115080|gb|ESQ55363.1| hypothetical protein
           EUTSA_v10025547mg [Eutrema salsugineum]
          Length = 360

 Score =  214 bits (546), Expect = 5e-53
 Identities = 120/290 (41%), Positives = 160/290 (55%), Gaps = 19/290 (6%)
 Frame = -1

Query: 990 PESVSKSRDWPRPNTIPWQSKVANLVNLVGSVARPIKFQESDDGKFWAGTTISQGEADGS 811
           P +  K     RPN I +QS+VAN VNLVG V +P++F+ S DGKFWAGT ISQ     S
Sbjct: 68  PATAKKENGLARPNEIAYQSEVANWVNLVGFVDQPVQFEASSDGKFWAGTVISQRSGSDS 127

Query: 810 TAIEIPIIFEGHLAQTAACHLKERDLIHIAGHFSEDPPQISLHCGHCIGQVMVHQISFIE 631
           +A  IPIIFEG LA+ AA ++ + D IH++G    D P  ++       QV+V  + F++
Sbjct: 128 SAFWIPIIFEGDLAKIAARYISKDDRIHVSGKLFIDSPPPNMTYAQSNVQVLVQNLDFVQ 187

Query: 630 -------------ETPQAKERYYSRLKQVL----DNFWRDLCGNPSQWTDYRKDKLNGLV 502
                        E    K+R     K ++     + W  L  NP +W D+R++K NGLV
Sbjct: 188 PYSPPMVISSSEKEESAIKKRPARAKKDIVMEEAFDSWNHLIENPKEWWDHRENKANGLV 247

Query: 501 KPKHPDFKRKDSGQPLWLNTAPKWAISELPTTSELSIASEEEGSSLSNAQKRPEGSCWRK 322
           KP+HPDFK KD+   LWLN AP W + +L            EG        +  G   ++
Sbjct: 248 KPRHPDFKNKDTSVSLWLNKAPDWVLPKL------------EGLEFDVLVPKSRGV--KQ 293

Query: 321 ESEEASWKNLTQNPDKWWDVRSDK--LFNHDFEHKDTGKALWLSSSPDWV 178
              E SWK+L QNPDKWWD R DK      DF+HK+TG+ALWL+ SP WV
Sbjct: 294 LKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNESPTWV 343



 Score = 61.2 bits (147), Expect = 9e-07
 Identities = 30/68 (44%), Positives = 40/68 (58%)
 Frame = -1

Query: 615 KERYYSRLKQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAP 436
           K R   +LK   +  W+DL  NP +W D R DK N     K PDFK K++G+ LWLN +P
Sbjct: 287 KSRGVKQLKG--EESWKDLVQNPDKWWDNRIDKRNA----KAPDFKHKETGEALWLNESP 340

Query: 435 KWAISELP 412
            W + +LP
Sbjct: 341 TWVLPKLP 348


>gb|AAM61481.1| unknown [Arabidopsis thaliana]
          Length = 440

 Score =  204 bits (520), Expect = 5e-50
 Identities = 118/297 (39%), Positives = 166/297 (55%), Gaps = 22/297 (7%)
 Frame = -1

Query: 1002 SPKDPESVSKSRDWPRPNTIPWQSKVANLVNLVGSVARPIKFQESDDGKFWAGTTISQGE 823
            S K P +V+  ++   P TI ++ +++N +NL+G V +P++F    DGKFWAGT ISQ  
Sbjct: 55   SVKPPLNVATEKESTPPKTIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRS 114

Query: 822  ADGSTAIEIPIIFEGHLAQTAACHLKERDLIHIAGHFSEDPPQISLHCGHCIGQVMVHQI 643
               S+   IPIIFEG LA+ A  H+K+ D IH++G    D P  ++       QVMV  +
Sbjct: 115  GSKSSNFWIPIIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNL 174

Query: 642  SFI---------------EETPQAKERYYSRLKQVLD----NFWRDLCGNPSQWTDYRKD 520
            +F+               E T   K+   S+  +V+D    N W+ L  NP +W D+R +
Sbjct: 175  NFVQAATSTTKTISPPEKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGN 234

Query: 519  KLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAISELPTTSELSIASEEEGSSLSNAQKRPE 340
            K NGLVKP HPDFK K  G  LWL+TAP WA+ +L                L      P+
Sbjct: 235  KANGLVKPGHPDFKMKVGGLSLWLSTAPDWALLKL--------------EELKFDVLVPK 280

Query: 339  GSCWRKESE-EASWKNLTQNPDKWWDVRSDK--LFNHDFEHKDTGKALWLSSSPDWV 178
            G+    + + E SWK+L QNPDKW D RSDK  +   DF+HK+TG+ALW+++SP WV
Sbjct: 281  GNIKLNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWMTNSPIWV 337



 Score =  112 bits (281), Expect = 3e-22
 Identities = 58/135 (42%), Positives = 80/135 (59%), Gaps = 5/135 (3%)
 Frame = -1

Query: 570 WRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAISELP---TTSE 400
           W+DL  NP +W D R DK N     K+PDFK K++G+ LW+  +P W +S+LP      E
Sbjct: 294 WKDLVQNPDKWLDNRSDKTN----VKYPDFKHKETGEALWMTNSPIWVLSKLPPLKKNQE 349

Query: 399 LSIASEEEGSSLSNAQKRPEGSCWRKESEEASWKNLTQNPDKWWDVRSDKL--FNHDFEH 226
             + S +  S L    + P+G+  + + EE  WKNL +NP KWWD R DK      DF+H
Sbjct: 350 RPLMSNKV-SQLELDVEVPKGNLKQLKREEI-WKNLVENPSKWWDNRLDKRNPKGPDFKH 407

Query: 225 KDTGKALWLSSSPDW 181
           K+TG+ALW+  SP W
Sbjct: 408 KETGEALWIGDSPTW 422



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 32/83 (38%), Positives = 52/83 (62%)
 Frame = -1

Query: 660 VMVHQISFIEETPQAKERYYSRLKQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDF 481
           +M +++S +E   +  +    +LK+  +  W++L  NPS+W D R DK N    PK PDF
Sbjct: 352 LMSNKVSQLELDVEVPKGNLKQLKR--EEIWKNLVENPSKWWDNRLDKRN----PKGPDF 405

Query: 480 KRKDSGQPLWLNTAPKWAISELP 412
           K K++G+ LW+  +P WA+S+LP
Sbjct: 406 KHKETGEALWIGDSPTWALSKLP 428


>ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|332007778|gb|AED95161.1|
            protein OSB3 [Arabidopsis thaliana]
          Length = 442

 Score =  204 bits (518), Expect = 9e-50
 Identities = 118/296 (39%), Positives = 165/296 (55%), Gaps = 21/296 (7%)
 Frame = -1

Query: 1002 SPKDPESVSKSRDWPRPNTIPWQSKVANLVNLVGSVARPIKFQESDDGKFWAGTTISQGE 823
            S K P +V+  ++   P  I ++ +++N +NL+G V +P++F    DGKFWAGT ISQ  
Sbjct: 55   SVKPPLNVATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRS 114

Query: 822  ADGSTAIEIPIIFEGHLAQTAACHLKERDLIHIAGHFSEDPPQISLHCGHCIGQVMVHQI 643
               S+   IPIIFEG LA+ A  H+K+ D IH++G    D P  ++       QVMV  +
Sbjct: 115  GSKSSNFWIPIIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNL 174

Query: 642  SFI---------------EETPQAKERYYSRLKQVLD----NFWRDLCGNPSQWTDYRKD 520
            +F+               E T   K+   S+  +V+D    N W+ L  NP +W D+R +
Sbjct: 175  NFVQAATSTTKTISPPEKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGN 234

Query: 519  KLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAISELPTTSELSIASEEEGSSLSNAQKRPE 340
            K NGLVKP HPDFK K  G  LWL+TAP WA+ +L    EL         ++   Q +  
Sbjct: 235  KANGLVKPGHPDFKMKVGGLSLWLSTAPDWALLKL---EELKFDVLVPKGNIKLNQLKDI 291

Query: 339  GSCWRKESEEASWKNLTQNPDKWWDVRSDK--LFNHDFEHKDTGKALWLSSSPDWV 178
            G        E SWK+L QNPDKW D RSDK  +   DF+HK+TG+ALW+++SP WV
Sbjct: 292  G--------EESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWMTNSPIWV 339



 Score =  116 bits (291), Expect = 2e-23
 Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 9/149 (6%)
 Frame = -1

Query: 600 SRLKQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAIS 421
           ++LK + +  W+DL  NP +W D R DK N     K+PDFK K++G+ LW+  +P W +S
Sbjct: 286 NQLKDIGEESWKDLVQNPDKWLDNRSDKTN----VKYPDFKHKETGEALWMTNSPIWVLS 341

Query: 420 ELPTTSELSIASEEEGSSLSNAQKR-------PEGSCWRKESEEASWKNLTQNPDKWWDV 262
           +LP      +   +E   +SN   +       P+G+  + + EE  WKNL +NP KWWD 
Sbjct: 342 KLP-----PLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEI-WKNLVENPSKWWDN 395

Query: 261 RSDKL--FNHDFEHKDTGKALWLSSSPDW 181
           R DK      DF+HK+TG+ALW+  SP W
Sbjct: 396 RLDKRNPKGPDFKHKETGEALWIGDSPTW 424



 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 32/82 (39%), Positives = 51/82 (62%)
 Frame = -1

Query: 657 MVHQISFIEETPQAKERYYSRLKQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFK 478
           M +++S +E   +  +    +LK+  +  W++L  NPS+W D R DK N    PK PDFK
Sbjct: 355 MSNKVSQLELDVEVPKGNLKQLKR--EEIWKNLVENPSKWWDNRLDKRN----PKGPDFK 408

Query: 477 RKDSGQPLWLNTAPKWAISELP 412
            K++G+ LW+  +P WA+S+LP
Sbjct: 409 HKETGEALWIGDSPTWALSKLP 430


>ref|NP_564370.1| protein OSB4 [Arabidopsis thaliana]
            gi|75334520|sp|Q9FYJ2.1|OSB4_ARATH RecName: Full=Protein
            OSB4, chloroplastic; AltName: Full=Organellar
            single-stranded DNA-binding protein 4; Flags: Precursor
            gi|9755375|gb|AAF98182.1|AC000107_5 F17F8.7 [Arabidopsis
            thaliana] gi|332193185|gb|AEE31306.1| protein OSB4
            [Arabidopsis thaliana]
          Length = 360

 Score =  204 bits (518), Expect = 9e-50
 Identities = 125/348 (35%), Positives = 171/348 (49%), Gaps = 47/348 (13%)
 Frame = -1

Query: 1074 SSQSTINRILNRVLVLQKSQHYSTSPKDPESVSK-----------SRDWPRPNTIPWQSK 928
            S + ++N    +  VL   Q  STS  +  S ++           S +WPRP  +P+Q K
Sbjct: 11   SIRPSLNSTARKSWVLSSQQFLSTSSTESSSRTRGGGGGNRAEKSSEEWPRPMEVPYQPK 70

Query: 927  VANLVNLVGSVARPIKFQESDDGKFWAGTTIS-------QGEADGSTAIEIPIIFEGHLA 769
            +AN ++L+G V +P++F  + DGKFWAGT IS       + E+D S+   IP++FEG LA
Sbjct: 71   IANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSESDSSSNFWIPVLFEGDLA 130

Query: 768  QTAACHLKERDLIHIAGHFSEDPPQISLHC------------GHCIGQVMVHQISFIE-- 631
             TA  +LK+ D +HI G    D  Q   +             G    QVMV  + +IE  
Sbjct: 131  HTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGSFSHQVMVRDLHYIEGS 190

Query: 630  -------------ETPQAKERYYSRLKQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKH 490
                         E          R ++   N W DL   P++W DYR+ K NG V PKH
Sbjct: 191  KAMPKVLPTLDQNEGVLKHSASVQRGREFGTNLWFDLVDKPNEWCDYREMKQNGSVNPKH 250

Query: 489  PDFKRKDSGQPLWLNTAPKWAISELPTTSELSIASEEEGSSLSNAQKRPEGSCWRKESEE 310
            PDFK+KD  Q LWLN AP   +SEL          ++    +    K+P+         E
Sbjct: 251  PDFKKKDGSQALWLNNAPTEILSEL----------KDVKFDIPKYAKQPKAG-------E 293

Query: 309  ASWKNLTQNPDKWWDVRSDKLF--NHDFEHKDTGKALWLSSSPDWVFE 172
             SWK+L  N +KWWD R DK    + DF+HK+TG  LWLS SP WV E
Sbjct: 294  ESWKDLVDNMNKWWDNRVDKRTPKSPDFKHKETGVGLWLSDSPSWVLE 341


>gb|AAM63642.1| unknown [Arabidopsis thaliana]
          Length = 360

 Score =  202 bits (515), Expect = 2e-49
 Identities = 125/348 (35%), Positives = 170/348 (48%), Gaps = 47/348 (13%)
 Frame = -1

Query: 1074 SSQSTINRILNRVLVLQKSQHYSTSPKDPESVSK-----------SRDWPRPNTIPWQSK 928
            S + ++N    +  VL   Q  STS  +  S ++           S +WPRP  +P+Q K
Sbjct: 11   SIRPSLNSTARKSWVLSSQQFLSTSSTESSSRTRGGGGGNRAEKSSEEWPRPMEVPYQPK 70

Query: 927  VANLVNLVGSVARPIKFQESDDGKFWAGTTIS-------QGEADGSTAIEIPIIFEGHLA 769
            +AN ++L+G V +P++F  + DGKFWAGT IS       + E+D S+   IP++FEG LA
Sbjct: 71   IANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSESDSSSNFWIPVLFEGDLA 130

Query: 768  QTAACHLKERDLIHIAGHFSEDPPQISLHC------------GHCIGQVMVHQISFIE-- 631
             TA  +LK+ D +HI G    D  Q   +             G    QVMV  + +IE  
Sbjct: 131  HTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGSFSHQVMVRDLHYIEGS 190

Query: 630  -------------ETPQAKERYYSRLKQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKH 490
                         E          R ++   N W DL   P++W DYR+ K NG V PKH
Sbjct: 191  KAMPKVLPTLDQNEGVLKHSASVQRGREFGTNLWFDLVDKPNEWCDYREMKQNGSVNPKH 250

Query: 489  PDFKRKDSGQPLWLNTAPKWAISELPTTSELSIASEEEGSSLSNAQKRPEGSCWRKESEE 310
            PDFK KD  Q LWLN AP   +SEL          ++    +    K+P+         E
Sbjct: 251  PDFKMKDGSQALWLNNAPTEILSEL----------KDVKFDIPKYAKQPKAG-------E 293

Query: 309  ASWKNLTQNPDKWWDVRSDKLF--NHDFEHKDTGKALWLSSSPDWVFE 172
             SWK+L  N +KWWD R DK    + DF+HK+TG  LWLS SP WV E
Sbjct: 294  ESWKDLVDNMNKWWDNRVDKRTPKSPDFKHKETGVGLWLSDSPSWVLE 341


>ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana]
            gi|75328911|sp|Q8GWJ4.1|OSB3_ARATH RecName: Full=Protein
            OSB3, chloroplastic/mitochondrial; AltName:
            Full=Organellar single-stranded DNA-binding protein 3;
            Flags: Precursor gi|26452626|dbj|BAC43396.1| unknown
            protein [Arabidopsis thaliana] gi|28973013|gb|AAO63831.1|
            unknown protein [Arabidopsis thaliana]
            gi|30102734|gb|AAP21285.1| At5g44785 [Arabidopsis
            thaliana] gi|110743279|dbj|BAE99530.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|332007779|gb|AED95162.1| protein OSB3 [Arabidopsis
            thaliana]
          Length = 440

 Score =  202 bits (514), Expect = 3e-49
 Identities = 117/297 (39%), Positives = 165/297 (55%), Gaps = 22/297 (7%)
 Frame = -1

Query: 1002 SPKDPESVSKSRDWPRPNTIPWQSKVANLVNLVGSVARPIKFQESDDGKFWAGTTISQGE 823
            S K P +V+  ++   P  I ++ +++N +NL+G V +P++F    DGKFWAGT ISQ  
Sbjct: 55   SVKPPLNVATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRS 114

Query: 822  ADGSTAIEIPIIFEGHLAQTAACHLKERDLIHIAGHFSEDPPQISLHCGHCIGQVMVHQI 643
               S+   IPIIFEG LA+ A  H+K+ D IH++G    D P  ++       QVMV  +
Sbjct: 115  GSKSSNFWIPIIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNL 174

Query: 642  SFI---------------EETPQAKERYYSRLKQVLD----NFWRDLCGNPSQWTDYRKD 520
            +F+               E T   K+   S+  +V+D    N W+ L  NP +W D+R +
Sbjct: 175  NFVQAATSTTKTISPPEKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGN 234

Query: 519  KLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAISELPTTSELSIASEEEGSSLSNAQKRPE 340
            K NGLVKP HPDFK K  G  LWL+TAP WA+ +L                L      P+
Sbjct: 235  KANGLVKPGHPDFKMKVGGLSLWLSTAPDWALLKL--------------EELKFDVLVPK 280

Query: 339  GSCWRKESE-EASWKNLTQNPDKWWDVRSDK--LFNHDFEHKDTGKALWLSSSPDWV 178
            G+    + + E SWK+L QNPDKW D RSDK  +   DF+HK+TG+ALW+++SP WV
Sbjct: 281  GNIKLNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWMTNSPIWV 337



 Score =  112 bits (281), Expect = 3e-22
 Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 9/139 (6%)
 Frame = -1

Query: 570 WRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAISELPTTSELSI 391
           W+DL  NP +W D R DK N     K+PDFK K++G+ LW+  +P W +S+LP      +
Sbjct: 294 WKDLVQNPDKWLDNRSDKTN----VKYPDFKHKETGEALWMTNSPIWVLSKLP-----PL 344

Query: 390 ASEEEGSSLSNAQKR-------PEGSCWRKESEEASWKNLTQNPDKWWDVRSDKL--FNH 238
              +E   +SN   +       P+G+  + + EE  WKNL +NP KWWD R DK      
Sbjct: 345 KKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEI-WKNLVENPSKWWDNRLDKRNPKGP 403

Query: 237 DFEHKDTGKALWLSSSPDW 181
           DF+HK+TG+ALW+  SP W
Sbjct: 404 DFKHKETGEALWIGDSPTW 422



 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 32/82 (39%), Positives = 51/82 (62%)
 Frame = -1

Query: 657 MVHQISFIEETPQAKERYYSRLKQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKHPDFK 478
           M +++S +E   +  +    +LK+  +  W++L  NPS+W D R DK N    PK PDFK
Sbjct: 353 MSNKVSQLELDVEVPKGNLKQLKR--EEIWKNLVENPSKWWDNRLDKRN----PKGPDFK 406

Query: 477 RKDSGQPLWLNTAPKWAISELP 412
            K++G+ LW+  +P WA+S+LP
Sbjct: 407 HKETGEALWIGDSPTWALSKLP 428


>gb|AAC79142.1| hypothetical protein [Arabidopsis thaliana]
          Length = 395

 Score =  202 bits (514), Expect = 3e-49
 Identities = 117/297 (39%), Positives = 165/297 (55%), Gaps = 22/297 (7%)
 Frame = -1

Query: 1002 SPKDPESVSKSRDWPRPNTIPWQSKVANLVNLVGSVARPIKFQESDDGKFWAGTTISQGE 823
            S K P +V+  ++   P  I ++ +++N +NL+G V +P++F    DGKFWAGT ISQ  
Sbjct: 55   SVKPPLNVATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRS 114

Query: 822  ADGSTAIEIPIIFEGHLAQTAACHLKERDLIHIAGHFSEDPPQISLHCGHCIGQVMVHQI 643
               S+   IPIIFEG LA+ A  H+K+ D IH++G    D P  ++       QVMV  +
Sbjct: 115  GSKSSNFWIPIIFEGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNL 174

Query: 642  SFI---------------EETPQAKERYYSRLKQVLD----NFWRDLCGNPSQWTDYRKD 520
            +F+               E T   K+   S+  +V+D    N W+ L  NP +W D+R +
Sbjct: 175  NFVQAATSTTKTISPPEKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGN 234

Query: 519  KLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAISELPTTSELSIASEEEGSSLSNAQKRPE 340
            K NGLVKP HPDFK K  G  LWL+TAP WA+ +L                L      P+
Sbjct: 235  KANGLVKPGHPDFKMKVGGLSLWLSTAPDWALLKL--------------EELKFDVLVPK 280

Query: 339  GSCWRKESE-EASWKNLTQNPDKWWDVRSDK--LFNHDFEHKDTGKALWLSSSPDWV 178
            G+    + + E SWK+L QNPDKW D RSDK  +   DF+HK+TG+ALW+++SP WV
Sbjct: 281  GNIKLNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWMTNSPIWV 337



 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = -1

Query: 570 WRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAISELP 412
           W+DL  NP +W D R DK N     K+PDFK K++G+ LW+  +P W +S+LP
Sbjct: 294 WKDLVQNPDKWLDNRSDKTN----VKYPDFKHKETGEALWMTNSPIWVLSKLP 342


>ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arabidopsis lyrata subsp.
            lyrata] gi|297309381|gb|EFH39805.1| hypothetical protein
            ARALYDRAFT_494502 [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score =  201 bits (511), Expect = 6e-49
 Identities = 129/343 (37%), Positives = 179/343 (52%), Gaps = 28/343 (8%)
 Frame = -1

Query: 1002 SPKDPESVSKSRDWPRPNTIPWQSKVANLVNLVGSVARPIKFQESDDGKFWAGTTISQGE 823
            S K P + +  ++   P  I ++ +++N +NL+G V +P++F    DGKFWAGT ISQ  
Sbjct: 55   SVKPPVNAAAEKESTPPKRIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRS 114

Query: 822  ADGSTAIEIPIIFEGHLAQTAACHLKERDLIHIAGHFSEDPPQISLHCGHCIGQVMVHQI 643
               S+   IPIIFEG LAQ A  H+K+ D IH++G    D P  ++       QVMV  +
Sbjct: 115  GSKSSNFWIPIIFEGDLAQIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNL 174

Query: 642  SFIEE--------TPQAKERYYSRLKQV-----------LDNFWRDLCGNPSQWTDYRKD 520
            +F++         +P  KE   ++ + V             N W+ L  NP +W D+R +
Sbjct: 175  NFVQAATSLTKTISPPEKEVISTKKRPVRSKKVKVIDEETSNSWKHLIENPKEWLDHRGN 234

Query: 519  KLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAISELPTTSELSI-ASEEEGSSLSNAQKRP 343
            K NGLVKP HPDFK K  G  LWL+TAP WA   LP   EL       +G+   N  K  
Sbjct: 235  KANGLVKPGHPDFKMKVGGLSLWLSTAPDWA---LPKLKELEFDVLVPKGNIKLNQLK-- 289

Query: 342  EGSCWRKESEEASWKNLTQNPDKWWDVRSDK--LFNHDFEHKDTGKALWLSSSPDWVF-E 172
                      E SWK+L QNPDKW D R DK  +   DF+HK+TG+ALW+++SP WV  +
Sbjct: 290  ---------GEESWKDLVQNPDKWLDNRLDKTNVKYPDFKHKETGEALWMTNSPIWVLSK 340

Query: 171  XXXXXXXX*R*L---EMPNAGLDNYLKND--TNLKQNESLQSL 58
                     R L    +P   LD  + N   T LK+ ES ++L
Sbjct: 341  LPPLKKNQERPLMSNTVPQLELDVVVPNGNLTQLKREESWKNL 383



 Score =  108 bits (269), Expect = 7e-21
 Identities = 57/140 (40%), Positives = 81/140 (57%), Gaps = 10/140 (7%)
 Frame = -1

Query: 570 WRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNTAPKWAISELPTTSELSI 391
           W+DL  NP +W D R DK N     K+PDFK K++G+ LW+  +P W +S+LP      +
Sbjct: 294 WKDLVQNPDKWLDNRLDKTN----VKYPDFKHKETGEALWMTNSPIWVLSKLPP-----L 344

Query: 390 ASEEEGSSLSNAQKR-------PEGSCWRKESEEASWKNLTQNPDKWWDVRSDKLFNH-- 238
              +E   +SN   +       P G+  + + EE SWKNL +NP KWWD R DK      
Sbjct: 345 KKNQERPLMSNTVPQLELDVVVPNGNLTQLKREE-SWKNLVENPSKWWDNRLDKRNPKAP 403

Query: 237 DFEHKDTGKALWL-SSSPDW 181
           DF+HK+TG+ LW+ ++SP W
Sbjct: 404 DFKHKETGEVLWINNNSPTW 423



 Score = 61.6 bits (148), Expect = 7e-07
 Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
 Frame = -1

Query: 570 WRDLCGNPSQWTDYRKDKLNGLVKPKHPDFKRKDSGQPLWLNT-APKWAISELP 412
           W++L  NPS+W D R DK N    PK PDFK K++G+ LW+N  +P WA+S+LP
Sbjct: 380 WKNLVENPSKWWDNRLDKRN----PKAPDFKHKETGEVLWINNNSPTWALSKLP 429


>ref|XP_002893671.1| single-stranded DNA binding protein [Arabidopsis lyrata subsp.
            lyrata] gi|297339513|gb|EFH69930.1| single-stranded DNA
            binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 357

 Score =  199 bits (506), Expect = 2e-48
 Identities = 124/348 (35%), Positives = 174/348 (50%), Gaps = 38/348 (10%)
 Frame = -1

Query: 1101 LTKPFIKTLSSQSTINRILNRVLVLQKSQHYSTSPKDPESVSK--SRDWPRPNTIPWQSK 928
            L+K    +L+S S  + +L+   +   S   S+  +   S ++  + +WPRP  +P+Q K
Sbjct: 8    LSKSIRPSLNSASKQSWVLSHQYLSTFSAESSSRTRGGGSRAEKSTEEWPRPTEVPYQPK 67

Query: 927  VANLVNLVGSVARPIKFQESDDGKFWAGTTIS-------QGEADGSTAIEIPIIFEGHLA 769
            +AN ++L+G V +P++F  + DGKFWAGT IS       +  +D S+   IP++FEG LA
Sbjct: 68   IANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSVSDSSSNFWIPVLFEGDLA 127

Query: 768  QTAACHLKERDLIHIAGHFSEDPPQISLHC------------GHCIGQVMVHQISFIEET 625
             TA  +LK+ D +HI G    D  Q   +             G    QVMV  + +IE +
Sbjct: 128  HTANSYLKKNDRVHITGQILGDVIQSGANSDQACVQLFKSFHGSFSHQVMVRDLHYIEGS 187

Query: 624  -------PQAKERY--------YSRLKQVLDNFWRDLCGNPSQWTDYRKDKLNGLVKPKH 490
                   P   +            R + V  N W DL   P +W DYR+ K NG V PKH
Sbjct: 188  KALPKVMPTVNQNEGVLKHSASVQRGRDVGTNLWFDLVDKPDEWCDYRESKQNGSVNPKH 247

Query: 489  PDFKRKDSGQPLWLNTAPKWAISELPTTSELSIASEEEGSSLSNAQKRPEGSCWRKESEE 310
            PDFK+KD  Q LWLN AP   +SEL          E+    +     +P+         E
Sbjct: 248  PDFKKKDGSQALWLNKAPTEILSEL----------EDVKFDIPKYAPKPKAG-------E 290

Query: 309  ASWKNLTQNPDKWWDVRSDKLFNH--DFEHKDTGKALWLSSSPDWVFE 172
             SWK+L +N +KWWD R DK      DF+HK+TG  LWLS SP WV E
Sbjct: 291  ESWKDLVENMNKWWDNRLDKRHPKAPDFKHKETGVGLWLSDSPSWVLE 338