BLASTX nr result

ID: Papaver25_contig00017758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00017758
         (2840 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...   779   0.0  
emb|CBI34982.3| unnamed protein product [Vitis vinifera]              749   0.0  
ref|XP_007217083.1| hypothetical protein PRUPE_ppa000515mg [Prun...   736   0.0  
ref|XP_007031356.1| CRM family member 2, putative isoform 2 [The...   729   0.0  
ref|XP_007031355.1| CRM family member 2, putative isoform 1 [The...   729   0.0  
ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron sp...   716   0.0  
ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron sp...   716   0.0  
ref|XP_006849108.1| hypothetical protein AMTR_s00028p00245370 [A...   712   0.0  
ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|2...   705   0.0  
gb|EYU44699.1| hypothetical protein MIMGU_mgv1a000630mg [Mimulus...   704   0.0  
ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron sp...   703   0.0  
ref|XP_006296749.1| hypothetical protein CARUB_v10015149mg [Caps...   700   0.0  
gb|AAF24608.1|AC010870_1 unknown protein [Arabidopsis thaliana]       697   0.0  
ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron sp...   696   0.0  
ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   690   0.0  
ref|XP_004489340.1| PREDICTED: chloroplastic group IIA intron sp...   686   0.0  
ref|XP_004489339.1| PREDICTED: chloroplastic group IIA intron sp...   686   0.0  
ref|XP_007151134.1| hypothetical protein PHAVU_004G020800g [Phas...   661   0.0  
ref|XP_007151135.1| hypothetical protein PHAVU_004G020800g [Phas...   658   0.0  
ref|XP_003618343.1| Chloroplastic group IIA intron splicing faci...   640   0.0  

>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1044

 Score =  779 bits (2011), Expect = 0.0
 Identities = 442/839 (52%), Positives = 549/839 (65%), Gaps = 7/839 (0%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGDELISESNGNDGVTADKETNLVCTDSVKSGL 182
            SGS IILYRGANY YPYFL+ N   + S  +  S+S  N+     KE        VKS  
Sbjct: 261  SGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCSSGKGDVKSAG 320

Query: 183  PTVSGREAGTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEPLPIDA 362
            P  + + A  +L++GVG P +VRF LPGEAQ+ EEADR+LDGLGPRF DWWG +PLPIDA
Sbjct: 321  PMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWGYDPLPIDA 380

Query: 363  DLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIV 542
            DLLPA+VPGYRRPFRLLPYG+KPKLT+DEMT+LRRLGRPLPCHFALGRN+ LQGLAAS++
Sbjct: 381  DLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKLQGLAASMI 440

Query: 543  KLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVST 722
            KLWEKCEIAKIAVKRGVQNTNS MMAEELK LTGGTLLSRD+EFI  YRGKDFLPPAVS+
Sbjct: 441  KLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKDFLPPAVSS 500

Query: 723  AIEDRRKPRIHRDKHTMH------ESSSTEISPSLDSEAVNSTAAGEFHEKIVRKERKPK 884
            AIE RRK  IHR K  +        +  +E+  S  +   +     +     + K R  +
Sbjct: 501  AIEARRKYGIHRGKQKIDHHRLAINAEESELGTSEHASDKDCDGTDDQKTNSLSKRRMLR 560

Query: 885  STNAVMENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEERYMLKKVGLK 1064
            S  AV+E  + KL M                       PE+D+EGITEEERYML+KVGL+
Sbjct: 561  SAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLR 620

Query: 1065 MKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVHGVAKTLEAESGGILVAV 1244
            MKPFLLLGRRG+FDGT+ENMHLHWKYRELVKI+++ R  ED+HGVA+TLEAESGGILVAV
Sbjct: 621  MKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAV 680

Query: 1245 ERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDE 1424
            ERV +GYAII+YRGKNY+RPA LRPQTLLNK++A+KRSLEAQR ESLKLHVL+L +NIDE
Sbjct: 681  ERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKLHVLRLTRNIDE 740

Query: 1425 LKDKLVEEESENCKINHEPLTERQRERTQFEVTQVKEESEDLEINHVPSTEKQRETTQLE 1604
            LK +LV    +  + N + L ++ R      + + +  ++ + I+     +  R++  L+
Sbjct: 741  LKHQLVSRIKDK-ETNSKQLVDKSR----LHLARERYGADVILIHSSDGMDSSRDS--LQ 793

Query: 1605 TSDNLGAVGKPQSQKNAGSLEFTDSPKATEAHVSYLTSSPLDHSMDDHEEDTHLEKLMNY 1784
            TS N   +  P                           S  D   D+   +   E ++  
Sbjct: 794  TSHNDKRIDFP---------------------------SMCDSDTDEANPEPSSESVLK- 825

Query: 1785 TPEYEEFDNTELESKPEEVVHSVNFQEKLERIHEDSFPGDVRLQGDAAC-AVTDKAEGHA 1961
                      E+E+    V+  +N + +     E     D+  QG+ +C A+ +  E   
Sbjct: 826  ----------EIET---NVLTDMNEEGECTTCSE-----DLVSQGETSCYAIVNHEE--- 864

Query: 1962 XXXXXXXXXXXXRKNQLDSSVHGDQEQRGSKGVRFRAQPLSNRERLILRKQALTMKRRPV 2141
                         KN+    V    + R S  + FRA PLSNRERL+LRKQAL MK+RPV
Sbjct: 865  ----TMESSVKSSKNEFKPPVQRPVDTR-SNEMPFRAAPLSNRERLLLRKQALRMKKRPV 919

Query: 2142 LAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPN 2321
            +A+GRSN+VTGVAK IK HFQK+ LAIVNVKGRAKGTS+QE++FKLE+ATGAV+VSQEP+
Sbjct: 920  IAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPS 979

Query: 2322 KVILYRGWEEGGEDPRGGVTKGKAYSKKSSGRFVGNKNVVSPELMAAIRLECGLASSKE 2498
            KVILYRGW    E+ R          K S+GR  G +  VSPEL AAIRLECGL S+++
Sbjct: 980  KVILYRGWGAREENGRSYRMNRSDARKTSAGREGGPRPTVSPELRAAIRLECGLKSNQD 1038


>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score =  749 bits (1934), Expect = 0.0
 Identities = 424/799 (53%), Positives = 525/799 (65%), Gaps = 10/799 (1%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGDELISESNGNDGVTADKETNLVCTDSVKSGL 182
            SGS IILYRGANY YPYFL+ N   + S  +  S+S  N+     KE        VKS  
Sbjct: 261  SGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCSSGKGDVKSAG 320

Query: 183  PTVSGREAGTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEPLPIDA 362
            P  + + A  +L++GVG P +VRF LPGEAQ+ EEADR+LDGLGPRF DWWG +PLPIDA
Sbjct: 321  PMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWGYDPLPIDA 380

Query: 363  DLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIV 542
            DLLPA+VPGYRRPFRLLPYG+KPKLT+DEMT+LRRLGRPLPCHFALGRN+ LQGLAAS++
Sbjct: 381  DLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKLQGLAASMI 440

Query: 543  KLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVST 722
            KLWEKCEIAKIAVKRGVQNTNS MMAEELK LTGGTLLSRD+EFI  YRGKDFLPPAVS+
Sbjct: 441  KLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKDFLPPAVSS 500

Query: 723  AIEDRRKPRIHRDKHTMH------ESSSTEISPSLDSEAVNSTAAGEFHEKIVRKERKPK 884
            AIE RRK  IHR K  +        +  +E+  S  +   +     +     + K R  +
Sbjct: 501  AIEARRKYGIHRGKQKIDHHRLAINAEESELGTSEHASDKDCDGTDDQKTNSLSKRRMLR 560

Query: 885  STNAVMENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEERYMLKKVGLK 1064
            S  AV+E  + KL M                       PE+D+EGITEEERYML+KVGL+
Sbjct: 561  SAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLR 620

Query: 1065 MKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVHGVAKTLEAESGGILVAV 1244
            MKPFLLLGRRG+FDGT+ENMHLHWKYRELVKI+++ R  ED+HGVA+TLEAESGGILVAV
Sbjct: 621  MKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAV 680

Query: 1245 ERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDE 1424
            ERV +GYAII+YRGKNY+RPA LRPQTLLNK++A+KRSLEAQR ESLKLHVL+L +NIDE
Sbjct: 681  ERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKLHVLRLTRNIDE 740

Query: 1425 LKDKLVEEESENCKINHEPLTERQRERTQFEVTQVKEESEDLEINHVPSTEKQRETTQLE 1604
            LK +LV    +  + N + L ++ R      + + +  ++ + I+     +  R++  L+
Sbjct: 741  LKHQLVSRIKDK-ETNSKQLVDKSR----LHLARERYGADVILIHSSDGMDSSRDS--LQ 793

Query: 1605 TSDNLGAVGKPQSQKNAGSLEFTDSPKATEAHVSYLTSSPLDHSMDDHEEDTHLEKLMNY 1784
            TS N   +  P                           S  D   D+   +   E ++  
Sbjct: 794  TSHNDKRIDFP---------------------------SMCDSDTDEANPEPSSESVLK- 825

Query: 1785 TPEYEEFDNTELESKPEEVVHSVNFQEKLERIHEDSFPGDVRLQGDAAC-AVTDKAEGHA 1961
                      E+E+    V+  +N + +     E     D+  QG+ +C A+ +  E   
Sbjct: 826  ----------EIET---NVLTDMNEEGECTTCSE-----DLVSQGETSCYAIVNHEE--- 864

Query: 1962 XXXXXXXXXXXXRKNQLDSSVHGDQEQRGSKGVRFRAQPLSNRERLILRKQALTMKRRPV 2141
                         KN+    V    + R S  + FRA PLSNRERL+LRKQAL MK+RPV
Sbjct: 865  ----TMESSVKSSKNEFKPPVQRPVDTR-SNEMPFRAAPLSNRERLLLRKQALRMKKRPV 919

Query: 2142 LAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPN 2321
            +A+GRSN+VTGVAK IK HFQK+ LAIVNVKGRAKGTS+QE++FKLE+ATGAV+VSQEP+
Sbjct: 920  IAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPS 979

Query: 2322 KVILYRGW---EEGGEDPR 2369
            KVILYRGW   EE G   R
Sbjct: 980  KVILYRGWGAREENGRSYR 998


>ref|XP_007217083.1| hypothetical protein PRUPE_ppa000515mg [Prunus persica]
            gi|462413233|gb|EMJ18282.1| hypothetical protein
            PRUPE_ppa000515mg [Prunus persica]
          Length = 1117

 Score =  736 bits (1901), Expect = 0.0
 Identities = 446/905 (49%), Positives = 554/905 (61%), Gaps = 76/905 (8%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGD---ELISESNGNDGVTADKETNLVCTDSVK 173
            SGS I+LYRG NY YPYFL     +D++ D     + +++ NDG+      N +  +   
Sbjct: 238  SGSKIVLYRGVNYKYPYFLRDKVDEDSTIDTSHNALPDAHINDGI------NEISNEVNS 291

Query: 174  SGLPTVSGREAGTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEPLP 353
            + +P+ +   A   LVKGVG  ++VRF LPGEAQ+ EEAD ML+GLGPRF DWWG EPLP
Sbjct: 292  AIIPSTTNERAQPMLVKGVGLQDRVRFQLPGEAQLTEEADHMLEGLGPRFTDWWGYEPLP 351

Query: 354  IDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAA 533
            +DADLLPAIVPGYR+PFRLLPYG+KPKLTDDEMT +RRLGRPLPCHFALGRN+NLQGLA+
Sbjct: 352  VDADLLPAIVPGYRKPFRLLPYGLKPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLAS 411

Query: 534  SIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPA 713
            SIVKLWEKCEIAKIAVKRGVQNTN+ +MAEELKRLTGGTLL+RD+EFI LYRGKDFLPPA
Sbjct: 412  SIVKLWEKCEIAKIAVKRGVQNTNTEIMAEELKRLTGGTLLARDREFIVLYRGKDFLPPA 471

Query: 714  VSTAIEDRRKPRIHRDKHTMHESSSTEISPSLD--SEAVNSTAAGEFHEK-IVRKERKPK 884
            VS+AIE+RRK  IH +K      +S      L+  +E  N       H+  +   +RK K
Sbjct: 472  VSSAIEERRKYAIHAEKQIAEHGTSVTTRQELEPRTEPENKHEWTNDHKMGLPSAKRKLK 531

Query: 885  STNAVMENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEERYMLKKVGLK 1064
            S   V+   S KL M                       PE+D+EGIT+EERYML+KVGL+
Sbjct: 532  SAEVVVNRTSIKLSMALEKKAKAEKLLAELENAAIPQQPEIDKEGITKEERYMLRKVGLR 591

Query: 1065 MKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVHGVAKTLEAESGGILVAV 1244
            MKPFLL+GRRGVFDGTIENMHLHWKYRELVKI+ + +  E V  VA+TLEAESGGILVAV
Sbjct: 592  MKPFLLMGRRGVFDGTIENMHLHWKYRELVKIICNEKSIEAVQQVAQTLEAESGGILVAV 651

Query: 1245 ERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDE 1424
            ERV +GYAIIVYRGKNY RPA LRPQTLLNK++AMKRS+EAQR ESLKLHVL+L +NIDE
Sbjct: 652  ERVSKGYAIIVYRGKNYSRPASLRPQTLLNKREAMKRSIEAQRRESLKLHVLRLNENIDE 711

Query: 1425 LKDKLV-EEESENCKINHEPLTERQRERTQFEVTQV------------------------ 1529
            LK  LV ++E++N +   E   E  R++ +  VT V                        
Sbjct: 712  LKLLLVKDKEADNLQSVGESRNELARDKQEAHVTPVNLNDGMGAVVNGQLATQQDEVISF 771

Query: 1530 ----------------------KEESEDLEINHVPSTEK-QRETTQLETSDNLGAVGK-- 1634
                                   EE E  ++   PS E    ET      D  G VG   
Sbjct: 772  SSTWDEDEIGKFKPGSSNESVTNEEDEIGKVEPGPSNESVTNETPANFLKDTNGEVGDFV 831

Query: 1635 ----PQSQKNAGSLE------FTDSPKATEAHVSYLTSSPLDHSMDDHEEDTHLEKLMNY 1784
                P+    AG +       F       EAHV+ +  +    ++ + +  T  +K++ +
Sbjct: 832  STCFPEDVMPAGVISEIVHVLFFKGRGKQEAHVTPMKLNDGMGTIVNGQLATQQDKVITF 891

Query: 1785 TPEYEEFDNTELE--SKPEEVVH--------SVNFQEKLERIHEDSFPGDVRLQGDAACA 1934
            +    E +N E+E  S  E V +         VN +E +      SFP D   +  +   
Sbjct: 892  SSICCEDENGEVEPISSSEPVTNETHANLFRDVNGEEGVS--ISTSFPEDAMAKDSSGRF 949

Query: 1935 VTDKAEGHAXXXXXXXXXXXXRKNQLDSSVHGDQEQRGSKGVRFRAQPLSNRERLILRKQ 2114
               ++E                   +   V  D  +R  K V      LSN ERL+LRKQ
Sbjct: 950  GNSESE-----------------PSVPVMVRKDFNERPLKSVH-----LSNGERLLLRKQ 987

Query: 2115 ALTMKRRPVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATG 2294
            AL MK+RPVLA+GR+N+V+GVAK IK HF+K+ LAIVNVKGRAKGTS++E+V KLE+ATG
Sbjct: 988  ALKMKKRPVLAVGRNNIVSGVAKTIKAHFEKHPLAIVNVKGRAKGTSVREVVLKLEQATG 1047

Query: 2295 AVMVSQEPNKVILYRGWEEGGEDPRGGVTKGKAYSKKSSGRFVGNKNVVSPELMAAIRLE 2474
             V+VSQEP+KVILYRGW   G++ R    K     KK     V  +  VSPEL+AAIRLE
Sbjct: 1048 GVLVSQEPSKVILYRGWGAAGDNDR----KASNTRKK-----VSTQGAVSPELLAAIRLE 1098

Query: 2475 CGLAS 2489
            CG  S
Sbjct: 1099 CGFKS 1103


>ref|XP_007031356.1| CRM family member 2, putative isoform 2 [Theobroma cacao]
            gi|508710385|gb|EOY02282.1| CRM family member 2, putative
            isoform 2 [Theobroma cacao]
          Length = 1045

 Score =  729 bits (1882), Expect = 0.0
 Identities = 418/844 (49%), Positives = 530/844 (62%), Gaps = 12/844 (1%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGDELISESNGNDGVTADKETNLVCTDSVKSGL 182
            SGS IILYRGANY YPYFL      D +      ++N ++    + E+     +S K+ +
Sbjct: 241  SGSKIILYRGANYRYPYFLADKIATDDTSSNASPDTNMDNVELHETESCSSEINSAKTAI 300

Query: 183  PTVSGREAGTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEPLPIDA 362
            P  + +     +V+GVGSP++VRF LPGEA++VEEA+ +LDGLGPRF DWWG EPLP+D 
Sbjct: 301  PNATNKMTKPMIVQGVGSPSRVRFQLPGEAELVEEANHLLDGLGPRFTDWWGYEPLPVDG 360

Query: 363  DLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIV 542
            DLLPAI+PGYRRPFRLLPYG+KP LT+DEMT LRRLGRPLPCHF LGRN+ LQGLAASIV
Sbjct: 361  DLLPAIIPGYRRPFRLLPYGVKPILTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAASIV 420

Query: 543  KLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVST 722
            K WEKCEIAK+AVKRGVQNTNS +MAEELK LTGGTLLSRDK+FI LYRGKDFLP AVS+
Sbjct: 421  KHWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFLPSAVSS 480

Query: 723  AIEDRRKPRIHRDKHTMHESSSTEISPSLDSEAVNS------TAAGEFHEKIVRKERKPK 884
            AIE+RR+  IH +K     S S + +  +  E   S       +A +         +  K
Sbjct: 481  AIEERRRHVIHVEKQGAECSKSKKTAQEVIVEDTKSGSESKINSAKDQRSNFFGDPKNMK 540

Query: 885  STNAVMENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEERYMLKKVGLK 1064
            S  A +     KL M                        E+D+EGIT+EERYML+KVGL+
Sbjct: 541  SAEAAIRKTDVKLSMALEKKAKAEKLLAELEQAEIPQQSEIDKEGITQEERYMLRKVGLR 600

Query: 1065 MKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVHGVAKTLEAESGGILVAV 1244
            MKPFLLLGRRGVFDGT+ENMHLHWKYRELVKI++     E VH +A+ LEAESGGILVAV
Sbjct: 601  MKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKETNVEAVHQLARMLEAESGGILVAV 660

Query: 1245 ERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDE 1424
            ERV +GYAIIVYRGKNY+RP  LRPQTLL K+QAMKRSLE QR +SLKLH+L L +N+++
Sbjct: 661  ERVSKGYAIIVYRGKNYERPTSLRPQTLLTKRQAMKRSLEEQRRKSLKLHILNLTRNVND 720

Query: 1425 LKDKLVEEESENCKINHE----PLTERQRERTQ-FEVTQVKEESEDLEINHVPSTEKQ-R 1586
            L+ +LV ++  N     E    PL + + E  Q  E T    E       HV S +K   
Sbjct: 721  LEHQLVVDKEANSMQTVEQSSLPLVQEELETLQSVEYTGSVIECPASSGGHVESRDKDGS 780

Query: 1587 ETTQLETSDNLGAVGKPQSQKNAGSLEFTDSPKATEAHVSYLTSSPLDHSMDDHEEDTHL 1766
            E+T ++    +  +   Q  K     EF +     +   ++ T S  + S +     +H 
Sbjct: 781  ESTSMKNDKMVATISIRQPSKQ----EFMEPSSIHDGFENHKTES--EFSAESVNRKSHA 834

Query: 1767 EKLMNYTPEYEEFDNTELESKPEEVVHSVNFQEKLERIHEDSFPGDVRLQGDAACAVTDK 1946
             +L     + E  D     S P+ ++  ++    +   H  S  G +    ++A      
Sbjct: 835  TELRALHTQVEMVDT----SYPDNLMEEIDDSGAINAEHGVSNNGPMESLVESA------ 884

Query: 1947 AEGHAXXXXXXXXXXXXRKNQLDSSVHGDQEQRGSKGVRFRAQPLSNRERLILRKQALTM 2126
                               + LD S+    E   +K +   A  LSN++RL+LRKQAL M
Sbjct: 885  -------------------SMLDVSISSAVENVSNK-MASTANFLSNKDRLLLRKQALKM 924

Query: 2127 KRRPVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMV 2306
            K+RPVLA+GRSN+VTGVAKAI+ HFQK+ LAIVNVKGRAKGTS+QE+V KL++ATGAV+V
Sbjct: 925  KKRPVLAVGRSNIVTGVAKAIRAHFQKHPLAIVNVKGRAKGTSVQEVVLKLQEATGAVLV 984

Query: 2307 SQEPNKVILYRGWEEGGEDPRGGVTKGKAYSKKSSGRFVGNKNVVSPELMAAIRLECGLA 2486
            SQEP+KVILYRGW  G E  RG        ++ +      N+  VSPEL+AAIRLECGL 
Sbjct: 985  SQEPSKVILYRGWGAGDELGRGD-------NRNAKDSLAQNRPAVSPELIAAIRLECGLQ 1037

Query: 2487 SSKE 2498
              +E
Sbjct: 1038 LQQE 1041


>ref|XP_007031355.1| CRM family member 2, putative isoform 1 [Theobroma cacao]
            gi|508710384|gb|EOY02281.1| CRM family member 2, putative
            isoform 1 [Theobroma cacao]
          Length = 1087

 Score =  729 bits (1882), Expect = 0.0
 Identities = 418/844 (49%), Positives = 530/844 (62%), Gaps = 12/844 (1%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGDELISESNGNDGVTADKETNLVCTDSVKSGL 182
            SGS IILYRGANY YPYFL      D +      ++N ++    + E+     +S K+ +
Sbjct: 283  SGSKIILYRGANYRYPYFLADKIATDDTSSNASPDTNMDNVELHETESCSSEINSAKTAI 342

Query: 183  PTVSGREAGTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEPLPIDA 362
            P  + +     +V+GVGSP++VRF LPGEA++VEEA+ +LDGLGPRF DWWG EPLP+D 
Sbjct: 343  PNATNKMTKPMIVQGVGSPSRVRFQLPGEAELVEEANHLLDGLGPRFTDWWGYEPLPVDG 402

Query: 363  DLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIV 542
            DLLPAI+PGYRRPFRLLPYG+KP LT+DEMT LRRLGRPLPCHF LGRN+ LQGLAASIV
Sbjct: 403  DLLPAIIPGYRRPFRLLPYGVKPILTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAASIV 462

Query: 543  KLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVST 722
            K WEKCEIAK+AVKRGVQNTNS +MAEELK LTGGTLLSRDK+FI LYRGKDFLP AVS+
Sbjct: 463  KHWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFLPSAVSS 522

Query: 723  AIEDRRKPRIHRDKHTMHESSSTEISPSLDSEAVNS------TAAGEFHEKIVRKERKPK 884
            AIE+RR+  IH +K     S S + +  +  E   S       +A +         +  K
Sbjct: 523  AIEERRRHVIHVEKQGAECSKSKKTAQEVIVEDTKSGSESKINSAKDQRSNFFGDPKNMK 582

Query: 885  STNAVMENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEERYMLKKVGLK 1064
            S  A +     KL M                        E+D+EGIT+EERYML+KVGL+
Sbjct: 583  SAEAAIRKTDVKLSMALEKKAKAEKLLAELEQAEIPQQSEIDKEGITQEERYMLRKVGLR 642

Query: 1065 MKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVHGVAKTLEAESGGILVAV 1244
            MKPFLLLGRRGVFDGT+ENMHLHWKYRELVKI++     E VH +A+ LEAESGGILVAV
Sbjct: 643  MKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKETNVEAVHQLARMLEAESGGILVAV 702

Query: 1245 ERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDE 1424
            ERV +GYAIIVYRGKNY+RP  LRPQTLL K+QAMKRSLE QR +SLKLH+L L +N+++
Sbjct: 703  ERVSKGYAIIVYRGKNYERPTSLRPQTLLTKRQAMKRSLEEQRRKSLKLHILNLTRNVND 762

Query: 1425 LKDKLVEEESENCKINHE----PLTERQRERTQ-FEVTQVKEESEDLEINHVPSTEKQ-R 1586
            L+ +LV ++  N     E    PL + + E  Q  E T    E       HV S +K   
Sbjct: 763  LEHQLVVDKEANSMQTVEQSSLPLVQEELETLQSVEYTGSVIECPASSGGHVESRDKDGS 822

Query: 1587 ETTQLETSDNLGAVGKPQSQKNAGSLEFTDSPKATEAHVSYLTSSPLDHSMDDHEEDTHL 1766
            E+T ++    +  +   Q  K     EF +     +   ++ T S  + S +     +H 
Sbjct: 823  ESTSMKNDKMVATISIRQPSKQ----EFMEPSSIHDGFENHKTES--EFSAESVNRKSHA 876

Query: 1767 EKLMNYTPEYEEFDNTELESKPEEVVHSVNFQEKLERIHEDSFPGDVRLQGDAACAVTDK 1946
             +L     + E  D     S P+ ++  ++    +   H  S  G +    ++A      
Sbjct: 877  TELRALHTQVEMVDT----SYPDNLMEEIDDSGAINAEHGVSNNGPMESLVESA------ 926

Query: 1947 AEGHAXXXXXXXXXXXXRKNQLDSSVHGDQEQRGSKGVRFRAQPLSNRERLILRKQALTM 2126
                               + LD S+    E   +K +   A  LSN++RL+LRKQAL M
Sbjct: 927  -------------------SMLDVSISSAVENVSNK-MASTANFLSNKDRLLLRKQALKM 966

Query: 2127 KRRPVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMV 2306
            K+RPVLA+GRSN+VTGVAKAI+ HFQK+ LAIVNVKGRAKGTS+QE+V KL++ATGAV+V
Sbjct: 967  KKRPVLAVGRSNIVTGVAKAIRAHFQKHPLAIVNVKGRAKGTSVQEVVLKLQEATGAVLV 1026

Query: 2307 SQEPNKVILYRGWEEGGEDPRGGVTKGKAYSKKSSGRFVGNKNVVSPELMAAIRLECGLA 2486
            SQEP+KVILYRGW  G E  RG        ++ +      N+  VSPEL+AAIRLECGL 
Sbjct: 1027 SQEPSKVILYRGWGAGDELGRGD-------NRNAKDSLAQNRPAVSPELIAAIRLECGLQ 1079

Query: 2487 SSKE 2498
              +E
Sbjct: 1080 LQQE 1083


>ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 1049

 Score =  716 bits (1849), Expect = 0.0
 Identities = 418/848 (49%), Positives = 536/848 (63%), Gaps = 16/848 (1%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGDELISESNGNDGVTADKETNLVCTDSVKSGL 182
            SGS IILYRGA+Y YPYF   +  ++++ D       G    T +  TN   TD VK   
Sbjct: 248  SGSNIILYRGADYKYPYFSEISFENNSAQDATPDLFMG----TEEHMTNSSGTDVVK--- 300

Query: 183  PTVSGREAGTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEPLPIDA 362
            P  S R++   +++GVGSP++VRF LPGEA+  EEAD++L+GLGPRF DWWG EPLPIDA
Sbjct: 301  PDASDRKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEGLGPRFTDWWGCEPLPIDA 360

Query: 363  DLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIV 542
            DLLPAIVPGY+RPFRLLPYG+KPKLT+DEMT LRRLGRPLPCHF LGRN+ LQGLAA+IV
Sbjct: 361  DLLPAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAAAIV 420

Query: 543  KLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVST 722
            KLWEKCEIAK+AVKRGVQNTNS +MAEELK LTGGTLLSRD+EFI  YRGKDFLP AVS+
Sbjct: 421  KLWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDREFIVFYRGKDFLPSAVSS 480

Query: 723  AIEDRRKPRIHRDKHTMHESS---STEISPSLDSEAVNSTAAGEFHEKIVRKERKPKSTN 893
            AIE+RRK     +K     SS   + E   S      +   A   ++K V++++K  S  
Sbjct: 481  AIEERRKQVFEEEKRNGFNSSVANAKERKQSTTGSVSDDGHARRNNQKGVQEKKKLTSME 540

Query: 894  AVMENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEERYMLKKVGLKMKP 1073
            A ++  + KL                          ++D+EGITEEER+ML+K+GL+MKP
Sbjct: 541  AAIKRTADKLTTALEKKAEAENLLLELEEDEVPQQSDMDKEGITEEERFMLRKIGLRMKP 600

Query: 1074 FLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVHGVAKTLEAESGGILVAVERV 1253
            FLLLGRRGVFDGT+ENMHLHWKYRELVK++   +  E+VH +A+ LEAESGGILVAVE V
Sbjct: 601  FLLLGRRGVFDGTVENMHLHWKYRELVKVITGRKTIEEVHQIARMLEAESGGILVAVELV 660

Query: 1254 DRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDELKD 1433
            ++G+AIIVYRGKNY+RPA LRPQTLL+K++AMKRS+EAQR +SLKLHVLKL QNI+ L+ 
Sbjct: 661  NKGHAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALQS 720

Query: 1434 KLVEEESENCKINHEPLTERQRERTQFEVTQVKEESEDLEINHVPSTEKQRETTQLETSD 1613
            +L + E E   I    + +R     Q  VT + + +         ++  +      E +D
Sbjct: 721  RLAKNE-EMVHIQSPDIVDR-----QVPVTGISDAAGGTNYQSSSASPTEDSGDAAEDTD 774

Query: 1614 NLGAVGKPQSQKNAGSLEFTDSPKATEAHVSYLTSSPLDHSMDDHEEDTHLEKLMNYTPE 1793
                   P SQK   S                  SS  DH   + +++  ++    Y  +
Sbjct: 775  -------PSSQKELSS-----------------DSSDTDH---NSQQEFPIDPFFQYEGK 807

Query: 1794 YEEFDNTELESKPE-EVVHSVNFQEKLERIHEDSFPGDVRLQGDAACAVTDKAEGHAXXX 1970
             E   +T    +PE + + S+   + +  ++ D      +  G A      K+       
Sbjct: 808  VEAVGDT---IQPEHQSISSIKESKSMFNVNVDQ-----KTFGSAVSESVSKSSRGEVKI 859

Query: 1971 XXXXXXXXXRKNQLDS--------SVHGDQEQRG----SKGVRFRAQPLSNRERLILRKQ 2114
                     +  ++D         SV   Q  R     S+G+  R   LSNRERL+LRKQ
Sbjct: 860  HFSETRSFNKPREVDDKKEVSQLPSVKPQQALRSTRSRSEGMPTRKVQLSNRERLLLRKQ 919

Query: 2115 ALTMKRRPVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATG 2294
            AL MK++PVLA+GRSN+VTGVAK IK HF+K  LAIVNVKGRAKGTS++E+VFKLE+ATG
Sbjct: 920  ALKMKKQPVLAVGRSNIVTGVAKNIKEHFKKYPLAIVNVKGRAKGTSVREVVFKLEQATG 979

Query: 2295 AVMVSQEPNKVILYRGWEEGGEDPRGGVTKGKAYSKKSSGRFVGNKNVVSPELMAAIRLE 2474
            AV+VSQEP+KVILYRGW  GGE    G + G       + R       +SPEL++AIRLE
Sbjct: 980  AVLVSQEPSKVILYRGWGPGGE---RGASNGNDTRNSRNSREQKELMSISPELISAIRLE 1036

Query: 2475 CGLASSKE 2498
            CGL S+ +
Sbjct: 1037 CGLQSNHD 1044


>ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 1049

 Score =  716 bits (1847), Expect = 0.0
 Identities = 413/848 (48%), Positives = 538/848 (63%), Gaps = 16/848 (1%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGDELISESNGNDGVTADKE-TNLVCTDSVKSG 179
            SGS IILYRGA+Y YPYF   +  ++++ D     +N +  + A++  TN    D+VKS 
Sbjct: 248  SGSNIILYRGADYKYPYFSENSFENNSAQD-----ANPDLFMGAEEHMTNSSGIDAVKSD 302

Query: 180  LPTVSGREAGTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEPLPID 359
                S R++   +++GVGSP++VRF LPGEA+  EEAD++L+GLGPRF DWWG EPLPID
Sbjct: 303  ---ASDRKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEGLGPRFTDWWGCEPLPID 359

Query: 360  ADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASI 539
            ADLLPAIVPGY+RPFRLLPYG+KPKLT+DEMT LRRLGRPLPCHF LGRN+ LQGLAA+I
Sbjct: 360  ADLLPAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAAAI 419

Query: 540  VKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVS 719
            VKLWEKCEIAK+AVKRGVQNTNS +M EELK LTGGTLLSRD+EFI  YRGKDFLP AVS
Sbjct: 420  VKLWEKCEIAKVAVKRGVQNTNSELMVEELKWLTGGTLLSRDREFIVFYRGKDFLPSAVS 479

Query: 720  TAIEDRRKPRIHRDKHTMHESSSTEISPSLDSEAVNSTAAGEFH---EKIVRKERKPKST 890
            +AIE+RRK     +K     SS         S   + +  G  H   +K V++++K  S 
Sbjct: 480  SAIEERRKQVFEEEKRNGFNSSVANAKERKQSTTESVSDDGHAHRNNQKGVQEKKKLTSM 539

Query: 891  NAVMENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEERYMLKKVGLKMK 1070
             A ++  + KL                          ++D+EGITEEER+ML+K+GL+MK
Sbjct: 540  EAAIKRTADKLTTALEKKAEAEKLLLELEEDEVPQQSDMDKEGITEEERFMLRKIGLRMK 599

Query: 1071 PFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVHGVAKTLEAESGGILVAVER 1250
            PFLLLGRRGVFDGT+ENMHLHWKYRELVK++   +  E+VH +A+ LEAESGGILVAVER
Sbjct: 600  PFLLLGRRGVFDGTVENMHLHWKYRELVKVITGRKNIEEVHQIARMLEAESGGILVAVER 659

Query: 1251 VDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDELK 1430
            V++GYAIIVYRGKNY+RPA LRPQTLL+K++AMKRS+EAQR +SLKLHVLKL QNI+ L+
Sbjct: 660  VNKGYAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALQ 719

Query: 1431 DKLVEEESENCKINHEPLTERQRERTQFEVTQVKEESEDLEINHVPSTEKQRETTQLETS 1610
             +L + E E   I    + +R     Q  V  + + +       + ++  +      E +
Sbjct: 720  SRLAKNE-EISHIQSPDIVDR-----QVPVMGISDAAGGTNYQSIVASPIEDSGDAAEDT 773

Query: 1611 DNLGAVGKPQSQKNAGSLEFTDSPKATEAHVSYLTSSPLDHSMDDHEEDTHLEKLMNYTP 1790
            D       P SQK   S +F+D+                DH   D +++  +     Y  
Sbjct: 774  D-------PSSQKEL-SNDFSDT----------------DH---DSQQEFPINPFFQYEG 806

Query: 1791 EYEEFDNTELESKPEEVVHSVNFQEKLERIHEDSFPGDVRLQGDAACAVTDKAEGHAXXX 1970
            + E   +T       + + S+   + +  ++ D         G A      K+       
Sbjct: 807  KVEAMGDT--IQPQHQSISSIKESKSMFNVNVDQ-----ETFGSAVSESVSKSSRGEVKI 859

Query: 1971 XXXXXXXXXRKNQLDSSVHGDQ------------EQRGSKGVRFRAQPLSNRERLILRKQ 2114
                     +  ++++ +   Q             +  S+G+  R   LSNRERL+LRKQ
Sbjct: 860  HFSETRSFNKPREVNNKMEVSQPPPVKPQQTLRSTRSRSEGMSTRRVQLSNRERLLLRKQ 919

Query: 2115 ALTMKRRPVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATG 2294
            AL MK++PVLA+GRSN+VTGVAK IK HF+K  LAIVNVKGRAKGTS++E+VFKLE+ATG
Sbjct: 920  ALKMKKQPVLAVGRSNIVTGVAKNIKEHFKKYPLAIVNVKGRAKGTSVREVVFKLEQATG 979

Query: 2295 AVMVSQEPNKVILYRGWEEGGEDPRGGVTKGKAYSKKSSGRFVGNKNVVSPELMAAIRLE 2474
            AV+VSQEP+KVILYRGW  GGE    G + G   S   + R       +SPEL++AIRLE
Sbjct: 980  AVLVSQEPSKVILYRGWGPGGE---RGASNGNDTSNSKNSREQKELMSISPELISAIRLE 1036

Query: 2475 CGLASSKE 2498
            CGL S+ +
Sbjct: 1037 CGLQSNND 1044


>ref|XP_006849108.1| hypothetical protein AMTR_s00028p00245370 [Amborella trichopoda]
            gi|548852581|gb|ERN10689.1| hypothetical protein
            AMTR_s00028p00245370 [Amborella trichopoda]
          Length = 1042

 Score =  712 bits (1838), Expect = 0.0
 Identities = 432/861 (50%), Positives = 533/861 (61%), Gaps = 29/861 (3%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGDELISESNGNDGVTADKETNLVCTDSVKSGL 182
            SGSIIILYRGANY YPYF+     +D S +E I E +    V     +N    ++  + L
Sbjct: 238  SGSIIILYRGANYTYPYFVAG---EDLSENEDIHEVSFKSSVVYGSGSN---EENKTNSL 291

Query: 183  PTVSGREA-------GTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGV 341
            P V G  A       G ++V GVGSPNKVRF LPGE Q+ +EADR+LDGLGPRF DWWG 
Sbjct: 292  PRVGGISAVEATQITGRSIVLGVGSPNKVRFQLPGERQLDKEADRLLDGLGPRFTDWWGY 351

Query: 342  EPLPIDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQ 521
             PLP+DADLLPA V GYR+PFRLLPYG+KPKLTD EMT LRRLGRPLPCHFALGRN+NLQ
Sbjct: 352  GPLPVDADLLPATVSGYRKPFRLLPYGVKPKLTDSEMTTLRRLGRPLPCHFALGRNRNLQ 411

Query: 522  GLAASIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDF 701
            GLA SIV+LWEKCEIAKIAVKRGVQNTNS +MAEELKRLTGGTLLSRD+EFI  YRGKDF
Sbjct: 412  GLATSIVRLWEKCEIAKIAVKRGVQNTNSELMAEELKRLTGGTLLSRDREFIVFYRGKDF 471

Query: 702  LPPAVSTAIEDRRKPRIHRD--KHTMHESSSTEISPSLDSEAVNSTAAGEF-------HE 854
            LPPAVS+AIE+RR   + R   K   +   S++ S   D   V +T+  E         E
Sbjct: 472  LPPAVSSAIEERRTVDVLRKQLKGNRNLDLSSQASLGYDVRLVKTTSDAELQDLNNQDEE 531

Query: 855  KIVRKERKPKSTNAVMENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEE 1034
            K+ + + KP   N  M+ +  KL                         P++D+EGITEEE
Sbjct: 532  KLSKDQLKPMKVNVAMKRLDWKLSEALEKKQMAERKLAELESKAELSKPDIDKEGITEEE 591

Query: 1035 RYMLKKVGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVHGVAKTLE 1214
            RYML+KVGL+MK FLLLGRRGVFDGTIENMHLHWKYREL+KI++  R   +VH  A+TLE
Sbjct: 592  RYMLRKVGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELIKIISKDRSIAEVHHAARTLE 651

Query: 1215 AESGGILVAVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLH 1394
            AESGGILV+VE V++G+AIIVYRGKNYQRP +LRPQ LLNK++AMK SLEAQR E+    
Sbjct: 652  AESGGILVSVETVNKGHAIIVYRGKNYQRPDNLRPQNLLNKREAMKHSLEAQRREAKDDR 711

Query: 1395 VLKLAQNIDELKDKLVEEESENCKINHEPLTERQRERTQFEVTQ--VKEESEDLEINHVP 1568
            V+    +   L     E  +    +     +   ++    + +Q  +   S D E    P
Sbjct: 712  VVASPHSTRYLGSSNCELGNTEHTLGSLDYSNHFKDMENGDASQGPLHSSSSDDEDVVTP 771

Query: 1569 STEKQRETTQLETSDNLGAVGKPQSQKNAGSLEFTDSPKATEAHVSYLTSSPLDHSMDDH 1748
            S   +  T+  + +  +         K     +F  SPK   +  + ++ S    S D+ 
Sbjct: 772  SNGVRWSTSYADDAQQVVV-------KRRFPRDFEKSPKDVSSSKTVVSRSCSCVSQDEA 824

Query: 1749 EEDTHLEKLMNYTPEYEEFDNTELESKPEEVVHSVNFQEKLERIHEDSFPGDVRLQGDAA 1928
            EE   LE      P++    +TE                            D+ L    A
Sbjct: 825  EERLELE------PDF----HTE----------------------------DIMLHNKPA 846

Query: 1929 CAVTDKAEGHAXXXXXXXXXXXXRKNQL--DSSVHGDQEQRGSKGVR--FRAQPLSNRER 2096
             A T   EG               K  L   SS     ++  S GV   F+AQ LSN+ER
Sbjct: 847  LATT---EGEPLLPPMIEPTGLSSKAPLGNTSSSKPLDKRVSSIGVETSFKAQSLSNKER 903

Query: 2097 LILRKQALTMKRRPVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFK 2276
            LILRKQALTMK+RPVLAIGR+N+VTGVA+AIKTHF+KN LAIVNVKGRAKGTS+QE+VFK
Sbjct: 904  LILRKQALTMKKRPVLAIGRNNIVTGVAEAIKTHFKKNPLAIVNVKGRAKGTSVQEVVFK 963

Query: 2277 LEKATGAVMVSQEPNKVILYRGWEEGGED-------PRGGVTKGKAYSKKSSGRFVGNKN 2435
            LE+ATGAV+VSQEPNKVILYRGW  G ++        +  +  GKA  +  +G FVG K+
Sbjct: 964  LEQATGAVLVSQEPNKVILYRGWGLGDQNSGTVSKTSKRSINGGKALGRSGNG-FVGVKD 1022

Query: 2436 VVSPELMAAIRLECGLASSKE 2498
              SP+L+AA+RLECGL S++E
Sbjct: 1023 -ASPQLLAAMRLECGLISNEE 1042


>ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|22531018|gb|AAM97013.1|
            unknown protein [Arabidopsis thaliana]
            gi|37202002|gb|AAQ89616.1| At3g01370 [Arabidopsis
            thaliana] gi|332640136|gb|AEE73657.1| CRM family member 2
            [Arabidopsis thaliana]
          Length = 1011

 Score =  705 bits (1819), Expect = 0.0
 Identities = 410/839 (48%), Positives = 522/839 (62%), Gaps = 12/839 (1%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGDELISESNGNDGVTADKETNLVCTDSVKSGL 182
            SGS I+LYRG NY YPYF++     D + +     S+ + GV   +E   +     +S  
Sbjct: 241  SGSKILLYRGVNYQYPYFVSDR---DLAHEAASGASSMDQGVVDSREKQSIA----ESSA 293

Query: 183  PTVSGREAGTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEPLPIDA 362
            P+++ +     L +GVGSP+KVRF LPGE Q+VEEADR+L+GLGPRF DWW  +PLP+D 
Sbjct: 294  PSITNKMVKPMLTQGVGSPDKVRFQLPGEVQLVEEADRLLEGLGPRFTDWWAYDPLPVDG 353

Query: 363  DLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIV 542
            DLLPA+VP YRRPFRLLPYG+ PKLTDDEMT +RRLGRPLPCHFALGRN+NLQGLA +IV
Sbjct: 354  DLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLAVAIV 413

Query: 543  KLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVST 722
            KLWEKCE+AKIAVKRGVQNTNS +MAEELK LTGGTL+SRDK+FI LYRGKDFLP AVS+
Sbjct: 414  KLWEKCELAKIAVKRGVQNTNSELMAEELKWLTGGTLISRDKDFIVLYRGKDFLPSAVSS 473

Query: 723  AIEDRRKPRIHRDKHTMHESSSTEISPSLDSEAVNSTAAGEFHEK------IVRKERKPK 884
            AIE+RR+  +  +  ++H +  TE    +   AV      E  ++         K R+  
Sbjct: 474  AIEERRRQTMIMENSSVHGNKLTENEEEIKPRAVKEDIELEAKDQKDHIQTHQMKSRQRN 533

Query: 885  STNAVMENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEERYMLKKVGLK 1064
            S  A++E  S KL M                        ++D+EGIT +E+YML+K+GLK
Sbjct: 534  SPEAILEKTSMKLSMALEKKANAEKVLADLENRESPQLSDIDKEGITNDEKYMLRKIGLK 593

Query: 1065 MKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVHGVAKTLEAESGGILVAV 1244
            MKPFLLLGRRGVFDGTIENMHLHWKYRELVKI+ +    E  H VA+ LEAESGGILVAV
Sbjct: 594  MKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAV 653

Query: 1245 ERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDE 1424
            E V +GYAIIVYRGKNY+RP  LRPQTLL+K++A+KRS+EAQR +SLKLHVLKL+ NI+E
Sbjct: 654  EMVSKGYAIIVYRGKNYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEE 713

Query: 1425 LKDKLVEEESENCKINHEPLTERQRERTQFEVTQVKEESEDLEINHVPSTEKQRETTQLE 1604
            L  +LVE+ + N     E  ++ +          V+EE+E    N     EK RE  +L 
Sbjct: 714  LNRQLVEDSATN-----ETWSDGESSN-----MMVEEETE----NQHTEPEKAREKIELG 759

Query: 1605 TSDNLGAVGKPQSQKNAGSLEFTDSPKATEAHVSYLTSSPLDHSMDDHEEDTHLEKLMNY 1784
             S +L       S  ++G   + D    +E  V  LT+S  ++  D+ E           
Sbjct: 760  YSSDL-------SVPSSGEENWEDD---SEGEVDPLTTSSQEYQEDESE----------- 798

Query: 1785 TPEYEEFDNTELESKPEEVVHSVNFQEKLERIHEDSFPGDVRLQGDAACAVTDKAEGHAX 1964
            +   +  +   L+S     V +          H+ S P +  L  +       K  G + 
Sbjct: 799  SASSQRHEGNSLDSTANLSVFAETGSANASSFHDRSLPHNSFLNANR------KLPGSST 852

Query: 1965 XXXXXXXXXXXRKNQLDSSVHGDQEQRGSKGVRFRAQPLSNRERLILRKQALTMKRRPVL 2144
                       RK++ D  V                  LSNRERLILRKQAL MK+RP  
Sbjct: 853  GSGSQISALRERKSENDGLV----------------TDLSNRERLILRKQALKMKKRPPF 896

Query: 2145 AIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPNK 2324
            A+GRSNVVTG+A+ +K HFQKN LAIVNVKGRA GTS+QE++ KL++ TGA++VSQEP+K
Sbjct: 897  AVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSVQEVIAKLKEETGALLVSQEPSK 956

Query: 2325 VILYRGWEEGGED------PRGGVTKGKAYSKKSSGRFVGNKNVVSPELMAAIRLECGL 2483
            VILYRGW  G E+      P   V    + +  S+  FV +   VSP L+ AIRLECGL
Sbjct: 957  VILYRGW--GAEEEMKSFYPNNNVK--SSINLPSTRSFVDDPPHVSPALIEAIRLECGL 1011


>gb|EYU44699.1| hypothetical protein MIMGU_mgv1a000630mg [Mimulus guttatus]
          Length = 1040

 Score =  704 bits (1818), Expect = 0.0
 Identities = 419/846 (49%), Positives = 530/846 (62%), Gaps = 19/846 (2%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGDELISESNGNDGVTADKETNLVCTDSVKSGL 182
            SGS IILYRG++Y YPYF+  N+++D+S +E  S    ND  +   E++    +S   G 
Sbjct: 247  SGSNIILYRGSDYKYPYFMADNSSNDSSSEE--SPDMDNDQHSNALESS---EESPDLGS 301

Query: 183  PTVSGREAGT-----ALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEP 347
            P  +  E+ T     +LV+GVG P++VRF LPGEA+IV EAD +L+GLGPRF DWWG +P
Sbjct: 302  PRTNALESNTQISHPSLVQGVGLPDRVRFQLPGEAEIVAEADSLLEGLGPRFTDWWGNDP 361

Query: 348  LPIDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGL 527
            LP+DADLLPA+VPGY+RPFRLLPYG+  KLT+DEMT LRRLGRPLP HFALGRN+  QGL
Sbjct: 362  LPVDADLLPAVVPGYKRPFRLLPYGVNHKLTNDEMTTLRRLGRPLPIHFALGRNRKHQGL 421

Query: 528  AASIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLP 707
            AA IVKLWEKCEIAKIAVKRGVQNTNS++MAEELK LTGGTLLSRD+EFI LYRGKDFLP
Sbjct: 422  AACIVKLWEKCEIAKIAVKRGVQNTNSVLMAEELKWLTGGTLLSRDREFIVLYRGKDFLP 481

Query: 708  PAVSTAIEDRRKPRIHRDKHTMHESSSTEISPSLDSEAVNSTAAGEFHEK----IVRKER 875
             AVS+AI++RRK  I   K      S+             +T A + +E      VR++R
Sbjct: 482  AAVSSAIQERRKYEIDASKTRAGNLSNLNEKEHRHGTKEYATEAEQHNEADQNLQVREKR 541

Query: 876  KPKSTNAVMENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEERYMLKKV 1055
            + + + + ME  S+KL M                       PE D+EGITEEERYML+KV
Sbjct: 542  RVRFSESAMERTSTKLSMALEKKARAEKLLEELAKEESPQPPETDKEGITEEERYMLRKV 601

Query: 1056 GLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVHGVAKTLEAESGGIL 1235
            GL+MK FLLLGRRGVFDGT+ENMHLHWKYRELVK+    R  E+VHGVA+TLEAESGGIL
Sbjct: 602  GLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVCIGNRSIEEVHGVARTLEAESGGIL 661

Query: 1236 VAVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQN 1415
            VAVERV +G+ IIVYRGKNY RPA LRPQTLL+K++AMKRSLEAQR ESLKLHVLKL++N
Sbjct: 662  VAVERVSKGFDIIVYRGKNYTRPASLRPQTLLSKREAMKRSLEAQRRESLKLHVLKLSKN 721

Query: 1416 IDELKDKLVEEESENCKINHEPLTERQRERTQFEVTQVKEESEDLEINHVPSTEK--QRE 1589
            IDELK K+ ++E+     N   LTE        E+  V+E  E    N  P        +
Sbjct: 722  IDELKLKMAKDEN----TNRPHLTE------DLELGFVRESHETDATNKDPEEPMHISED 771

Query: 1590 TTQLETSDNLGAVGKPQSQKNAGSLEFTDSPKATEAHVSYLTSSPLDHSMDDHEEDTHLE 1769
            T  +   D  G V          SL+       +E  V+YL                   
Sbjct: 772  TVHIAQKDLPGDV----------SLQ-------SEVKVNYL------------------- 795

Query: 1770 KLMNYTPEYEEFDNTELESKPEEVVHSVN-FQEKLERIHEDSFPGDVRLQGDAACAVTDK 1946
                       F+ TE E +P  + +  N F +K  +I    F    R Q          
Sbjct: 796  -----------FETTEAEVQPTSLSNEGNSFSDKNNQIGNMEFVRSPRSQD--------- 835

Query: 1947 AEGHAXXXXXXXXXXXXRKNQLDSSVHGDQEQRGSKGVR-------FRAQPLSNRERLIL 2105
               ++            RK+      + D E  G K ++        R+  LSN+ERL+L
Sbjct: 836  -RRNSSPSTYIRPQTGRRKSDGGGYRNVDIEPSGQKPMKERPSLMPSRSVQLSNKERLLL 894

Query: 2106 RKQALTMKRRPVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEK 2285
            RKQAL MK+ P+LA+G+ NVVTGV K IK HF+K+ LAIVN+KGRAKGTS QE+++ LE+
Sbjct: 895  RKQALRMKKIPILAVGKRNVVTGVTKTIKEHFEKHPLAIVNIKGRAKGTSAQEVIYNLEQ 954

Query: 2286 ATGAVMVSQEPNKVILYRGWEEGGEDPRGGVTKGKAYSKKSSGRFVGNKNVVSPELMAAI 2465
            +TGAV+VSQEP+KVILYRGW     D    + + + +   S+ + V  + ++SPEL++A+
Sbjct: 955  STGAVLVSQEPSKVILYRGW-GFDTDSESNMRQNQDFKYDSTNKEVKTRPLISPELISAM 1013

Query: 2466 RLECGL 2483
            RLECGL
Sbjct: 1014 RLECGL 1019


>ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 1027

 Score =  703 bits (1814), Expect = 0.0
 Identities = 414/843 (49%), Positives = 535/843 (63%), Gaps = 16/843 (1%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTT-DDTSGDELISESNGNDGVTADK-ETNLVCTDSVKS 176
            SGS IILYRG +Y YPYFL+   + DD +GD +  +    D    DK E++    +SV  
Sbjct: 205  SGSKIILYRGTDYKYPYFLSDKVSRDDNTGDAM--QHMDEDAKNFDKRESHSSEKNSVTY 262

Query: 177  GLPTVSGREAGTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEPLPI 356
               + + + A  AL++GVGSPNKVRF LPGEA++ ++AD +L G+GPRFIDWWG +PLP+
Sbjct: 263  AGKSSNVKTAKPALIQGVGSPNKVRFQLPGEAELAKDADSLLTGIGPRFIDWWGYDPLPV 322

Query: 357  DADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAAS 536
            DADLLPA++PGYR+PFRLLPYG+KPKLTDDEMT +RRLG+ LPCHFALGRNK L GLAA+
Sbjct: 323  DADLLPAVIPGYRKPFRLLPYGVKPKLTDDEMTTMRRLGKHLPCHFALGRNKKLHGLAAA 382

Query: 537  IVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAV 716
            I+KLWE+CEI KIA+KRGV NTN  +MAEE+K LTGGTL++RDKEFI  YRGKDFLP AV
Sbjct: 383  IIKLWERCEIVKIAIKRGVLNTNGELMAEEIKYLTGGTLIARDKEFIVFYRGKDFLPTAV 442

Query: 717  STAIEDRRKPRIHRDKHTMHESSSTEISPSLDSEAVNSTAAGEFHEKIVRKERKPKSTNA 896
            S+AIE RR   +++ K T +  S T+     D      +     + K   K+       A
Sbjct: 443  SSAIEQRRSIGMYKLK-TRNSLSVTDDPDLKDGTIECDSEVKGMNFKKDTKQGMLTEAEA 501

Query: 897  VMENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEERYMLKKVGLKMKPF 1076
             +++ S KL M                        E+++EGITEEE+YML+++GLKM PF
Sbjct: 502  AIKSTSIKLSMALEEKAKAEKLLSELENAESPQEEEINKEGITEEEKYMLRRIGLKMSPF 561

Query: 1077 LLLGRRGVFDGTIENMHLHWKYRELVKIMASAR-GREDVHGVAKTLEAESGGILVAVERV 1253
            LLLGRRGVFDGT+ENMHLHWKYRELVKI+ + +   EDV  +A+TLEAESGGIL+AVERV
Sbjct: 562  LLLGRRGVFDGTVENMHLHWKYRELVKIICNKQMSLEDVQQIAQTLEAESGGILIAVERV 621

Query: 1254 DRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDELKD 1433
            ++ YAIIVYRGKNY RPA LRP+TLLNKKQA+KRS+EAQRCESLKLHVLKL +NI+ELK 
Sbjct: 622  NKSYAIIVYRGKNYSRPASLRPRTLLNKKQALKRSIEAQRCESLKLHVLKLDRNINELKH 681

Query: 1434 KLVEEESENCK----INHEPLTERQRERTQFEVTQVKEESEDLEINHVPSTEKQRETTQL 1601
            ++ ++   N K     N + + E+  E          E    +  N+        + T  
Sbjct: 682  QMAKDMEANSKQTSVDNQQAIQEQPVELIDSGGAHQAEPGNSINWNYPKEASVDYQQTMQ 741

Query: 1602 ETS----DNLGAV-GKPQSQKNAGSLE--FTDSPKATEAHVSYLTSSPLDHSMDDHEEDT 1760
            E S    D  GAV  +PQ+  N  S +    D+ +A +     L    +D S   H E  
Sbjct: 742  EQSVELFDGGGAVQSEPQNSINWNSPKEASVDNQQAIQGQSFEL----IDRSEAHHGEP- 796

Query: 1761 HLEKLMNY-TPEYEEFDNTE-LESKPEEVVHSVNFQEKLERIHEDSFPGDVRLQGDAACA 1934
              E  +++ +PE    DN + ++ +P E++      +          P + +L  D+   
Sbjct: 797  --ENSIDWNSPEEASVDNQQAIQGQPVELIDGGGAHQDEPESWSGLIPKETKLDRDSDSV 854

Query: 1935 VTDKAEGHAXXXXXXXXXXXXRKNQLDSSVHGDQEQRGSKGVRFRAQPLSNRERLILRKQ 2114
            V  +   H               ++ D  +        S  +  R+  LSNRERL+LRKQ
Sbjct: 855  VDTQ---HCVSISKVMESSIV-ASESDPDLSALVRDMSSNELPSRSVYLSNRERLLLRKQ 910

Query: 2115 ALTMKRRPVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATG 2294
            AL MK+RPVL++G+SN+VTG+AKAIK HFQK+ LAIVNVKGRAKGTSIQE+V KLE+ TG
Sbjct: 911  ALKMKKRPVLSVGKSNIVTGLAKAIKAHFQKHPLAIVNVKGRAKGTSIQEVVSKLEQETG 970

Query: 2295 AVMVSQEPNKVILYRGWEEGGEDPRGGVTKGKAYSKKSSGRFVGNKNVVSPELMAAIRLE 2474
            AV+VSQE NKVILYRGW E GE P   +   K       G+ V  K  VSPEL+ AIR+E
Sbjct: 971  AVLVSQELNKVILYRGWGE-GEKPSTAINFDKV------GKEVAAKPGVSPELLEAIRVE 1023

Query: 2475 CGL 2483
            CGL
Sbjct: 1024 CGL 1026


>ref|XP_006296749.1| hypothetical protein CARUB_v10015149mg [Capsella rubella]
            gi|482565458|gb|EOA29647.1| hypothetical protein
            CARUB_v10015149mg [Capsella rubella]
          Length = 1021

 Score =  700 bits (1806), Expect = 0.0
 Identities = 409/840 (48%), Positives = 518/840 (61%), Gaps = 13/840 (1%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGDELISESNGNDGVTADKETNLVCTDSVKSGL 182
            SGS I+LYRG NY YPYF++       S  E  S  +  D    D         + +S  
Sbjct: 244  SGSKILLYRGVNYQYPYFVSDRDLGHDSSVETASGGSSMDQEVVDSRDK---QSTAESSS 300

Query: 183  PTVSGREAGTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEPLPIDA 362
             +V+ +     L++GVGSP+KVRF LPGE Q+VEEAD++L+GLGPRF DWW  +PLP+D 
Sbjct: 301  LSVTSKTVKPLLIQGVGSPDKVRFQLPGEVQLVEEADQLLEGLGPRFTDWWAYDPLPVDG 360

Query: 363  DLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIV 542
            DLLPA+VP YRRPFRLLPYG+ PKLTDDEMT +RRLGRPLPCHFALGRN+NLQGLA +IV
Sbjct: 361  DLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLAVAIV 420

Query: 543  KLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVST 722
            KLWEKCE+AKIAVKRGVQNTNS +MAEELK LTGGTL+SRDK+FI LYRGKDFLP AVS+
Sbjct: 421  KLWEKCELAKIAVKRGVQNTNSELMAEELKWLTGGTLISRDKDFIVLYRGKDFLPFAVSS 480

Query: 723  AIEDRRKPRIHRDKHTMHESSSTEISPSLDSEAVNSTA---AGEFHEKIVR----KERKP 881
            AIE+RR+  +  +  + H +  T+    +  +A          E+ +  V+    K R+ 
Sbjct: 481  AIEERRRQTMIMENSSAHGNKMTKNEDVIKPQAATDDTELEEAEYKKDHVQTHHMKSRQR 540

Query: 882  KSTNAVMENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEERYMLKKVGL 1061
            KS  A++E  S KL M                         +D+EGIT++E+YML+K+GL
Sbjct: 541  KSPEAILEKTSIKLSMALEKKANAEKILAELESRESPQQSNIDKEGITDDEKYMLRKIGL 600

Query: 1062 KMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVHGVAKTLEAESGGILVA 1241
            KMKPFLLLGRRGVFDGTIENMHLHWKYRELVKI+ +    E  H VA+ LEAESGGILVA
Sbjct: 601  KMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEHSIEAAHEVAEILEAESGGILVA 660

Query: 1242 VERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNID 1421
            VE V +GYAIIVYRGKNY+RP+ LRPQTLL+K++A+KRS+EAQR +SLKLHVLKL+ NID
Sbjct: 661  VEMVSKGYAIIVYRGKNYERPSCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNID 720

Query: 1422 ELKDKLVEEESENCKINHEPLTERQRERTQFEVTQVKEESEDLEINHVPSTEKQRETTQL 1601
            EL  +LVE+   N   +    + R  E T+ ++ + +  SE++E+ +           + 
Sbjct: 721  ELNRQLVEDSVTNETRSDGESSMRMVEETENQLIEPENSSEEIELGYSSELSVSSSGEEN 780

Query: 1602 ETSDNLGAVGKPQSQKNAGSLEFTDSPKATEAHVSYLTSSPLDHSMDDHEEDTHLEKLMN 1781
               DN G V                         S+ TSS       +H+ED   E  ++
Sbjct: 781  WEDDNEGEVD------------------------SFTTSS------HEHQED---EPGLS 807

Query: 1782 YTPEYEEFDNTELESKPEEVVHSVNFQEKLERIHEDSFPGDVRLQGDAACAVTDKAEGHA 1961
               E    D+T   S   E   +     K    H+ S P    L  +    V  +  G +
Sbjct: 808  QRHEGNALDSTANISVLVETGSA-----KASSFHDRSMPQKSFLHTER--KVPKQELGSS 860

Query: 1962 XXXXXXXXXXXXRKNQLDSSVHGDQEQRGSKGVRFRAQPLSNRERLILRKQALTMKRRPV 2141
                        RK++ D  V                  LSNRERLILRKQAL MK+RP 
Sbjct: 861  TGSGSRVSALTERKSKNDGLV----------------ADLSNRERLILRKQALKMKKRPP 904

Query: 2142 LAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPN 2321
             A+GRSNVVTG+A+ +K HFQKN LAIVNVKGRA+GTS+QE++ KL++ TGA++VSQEP+
Sbjct: 905  FAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRAEGTSVQEVIAKLKEETGALLVSQEPS 964

Query: 2322 KVILYRGWEEGGED------PRGGVTKGKAYSKKSSGRFVGNKNVVSPELMAAIRLECGL 2483
            KVILYRGW  G E+      P   V    + +  SS  FV +   VSP L+ AIRLECGL
Sbjct: 965  KVILYRGW--GAEEEMKSFYPNSNVK--NSINLTSSKSFVDDPPPVSPALIEAIRLECGL 1020


>gb|AAF24608.1|AC010870_1 unknown protein [Arabidopsis thaliana]
          Length = 1020

 Score =  697 bits (1799), Expect = 0.0
 Identities = 410/848 (48%), Positives = 522/848 (61%), Gaps = 21/848 (2%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGDELISESNGNDGVTADKETNLVCTDSVKSGL 182
            SGS I+LYRG NY YPYF++     D + +     S+ + GV   +E   +     +S  
Sbjct: 241  SGSKILLYRGVNYQYPYFVSDR---DLAHEAASGASSMDQGVVDSREKQSIA----ESSA 293

Query: 183  PTVSGREAGTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEPLPIDA 362
            P+++ +     L +GVGSP+KVRF LPGE Q+VEEADR+L+GLGPRF DWW  +PLP+D 
Sbjct: 294  PSITNKMVKPMLTQGVGSPDKVRFQLPGEVQLVEEADRLLEGLGPRFTDWWAYDPLPVDG 353

Query: 363  DLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIV 542
            DLLPA+VP YRRPFRLLPYG+ PKLTDDEMT +RRLGRPLPCHFALGRN+NLQGLA +IV
Sbjct: 354  DLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLAVAIV 413

Query: 543  KLWEKCEIAKIAVKRGVQNTNSLMMAEEL---------KRLTGGTLLSRDKEFIALYRGK 695
            KLWEKCE+AKIAVKRGVQNTNS +MAEEL         K LTGGTL+SRDK+FI LYRGK
Sbjct: 414  KLWEKCELAKIAVKRGVQNTNSELMAEELKVVGLLLVIKWLTGGTLISRDKDFIVLYRGK 473

Query: 696  DFLPPAVSTAIEDRRKPRIHRDKHTMHESSSTEISPSLDSEAVNSTAAGEFHEK------ 857
            DFLP AVS+AIE+RR+  +  +  ++H +  TE    +   AV      E  ++      
Sbjct: 474  DFLPSAVSSAIEERRRQTMIMENSSVHGNKLTENEEEIKPRAVKEDIELEAKDQKDHIQT 533

Query: 858  IVRKERKPKSTNAVMENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEER 1037
               K R+  S  A++E  S KL M                        ++D+EGIT +E+
Sbjct: 534  HQMKSRQRNSPEAILEKTSMKLSMALEKKANAEKVLADLENRESPQLSDIDKEGITNDEK 593

Query: 1038 YMLKKVGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVHGVAKTLEA 1217
            YML+K+GLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKI+ +    E  H VA+ LEA
Sbjct: 594  YMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEA 653

Query: 1218 ESGGILVAVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHV 1397
            ESGGILVAVE V +GYAIIVYRGKNY+RP  LRPQTLL+K++A+KRS+EAQR +SLKLHV
Sbjct: 654  ESGGILVAVEMVSKGYAIIVYRGKNYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHV 713

Query: 1398 LKLAQNIDELKDKLVEEESENCKINHEPLTERQRERTQFEVTQVKEESEDLEINHVPSTE 1577
            LKL+ NI+EL  +LVE+ + N     E  ++ +          V+EE+E    N     E
Sbjct: 714  LKLSNNIEELNRQLVEDSATN-----ETWSDGESSN-----MMVEEETE----NQHTEPE 759

Query: 1578 KQRETTQLETSDNLGAVGKPQSQKNAGSLEFTDSPKATEAHVSYLTSSPLDHSMDDHEED 1757
            K RE  +L  S +L       S  ++G   + D    +E  V  LT+S  ++  D+ E  
Sbjct: 760  KAREKIELGYSSDL-------SVPSSGEENWEDD---SEGEVDPLTTSSQEYQEDESE-- 807

Query: 1758 THLEKLMNYTPEYEEFDNTELESKPEEVVHSVNFQEKLERIHEDSFPGDVRLQGDAACAV 1937
                     +   +  +   L+S     V +          H+ S P +  L  +     
Sbjct: 808  ---------SASSQRHEGNSLDSTANLSVFAETGSANASSFHDRSLPHNSFLNANR---- 854

Query: 1938 TDKAEGHAXXXXXXXXXXXXRKNQLDSSVHGDQEQRGSKGVRFRAQPLSNRERLILRKQA 2117
              K  G +            RK++ D  V                  LSNRERLILRKQA
Sbjct: 855  --KLPGSSTGSGSQISALRERKSENDGLV----------------TDLSNRERLILRKQA 896

Query: 2118 LTMKRRPVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGA 2297
            L MK+RP  A+GRSNVVTG+A+ +K HFQKN LAIVNVKGRA GTS+QE++ KL++ TGA
Sbjct: 897  LKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSVQEVIAKLKEETGA 956

Query: 2298 VMVSQEPNKVILYRGWEEGGED------PRGGVTKGKAYSKKSSGRFVGNKNVVSPELMA 2459
            ++VSQEP+KVILYRGW  G E+      P   V    + +  S+  FV +   VSP L+ 
Sbjct: 957  LLVSQEPSKVILYRGW--GAEEEMKSFYPNNNVK--SSINLPSTRSFVDDPPHVSPALIE 1012

Query: 2460 AIRLECGL 2483
            AIRLECGL
Sbjct: 1013 AIRLECGL 1020


>ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 1032

 Score =  696 bits (1796), Expect = 0.0
 Identities = 414/858 (48%), Positives = 536/858 (62%), Gaps = 31/858 (3%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGDELISESNGNDGVTADKETNLVCTDSVKSGL 182
            SGS IILYRG NY+YPYF      D+ S D L + S+ +DG  ++ E+ L C +  +S  
Sbjct: 239  SGSKIILYRGPNYIYPYFSHEILEDEGSQDALPA-SHSDDGGNSETESTLSCINDERSAG 297

Query: 183  PTVSGREAGTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEPLPIDA 362
            PT S +     L++GVG+PN+VRF LPGEA++ E+A+ +L+GLGPRF DWWG +PLP+DA
Sbjct: 298  PTSSVKMPSPTLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDPLPVDA 357

Query: 363  DLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIV 542
            DLLPAIVPGYR+PFRLLPYG+KPKLT+DEMT LRRL RPLPCHFALGRN+ LQGLAASI+
Sbjct: 358  DLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGLAASII 417

Query: 543  KLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVST 722
            +LWEKCEIAKIAVKRGVQNTN+ +MAEEL+ LTGGTLLSRD+EFI LYRGKDFLP AVS+
Sbjct: 418  QLWEKCEIAKIAVKRGVQNTNNKLMAEELQLLTGGTLLSRDREFIVLYRGKDFLPFAVSS 477

Query: 723  AIEDRRKPRIHRDKHTMHESSST---------EISPSLDSEAVNSTAAGEFHEKIVRKER 875
            A+E +R  R+H  K T +  ++T         E  P+ +S+++         +KIV + R
Sbjct: 478  AMEQKRHMRLHEMKQTDNSPATTGQGLKLEINENGPTNESQSITG------WKKIVSERR 531

Query: 876  KPKSTNAVMENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEERYMLKKV 1055
            K  S+   M   S KL +                       PE+D+EGIT EERYMLKKV
Sbjct: 532  KLMSSETSMRKTSIKLSIALEKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLKKV 591

Query: 1056 GLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVHGVAKTLEAESGGIL 1235
            GL+MKPFLLLGRRGVFDGT+ENMHLHWKYRELVKI+ + R  + VH VA+TLEAESGGIL
Sbjct: 592  GLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGIL 651

Query: 1236 VAVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQN 1415
            VAVERV R +AII++RGKNY+RP+ LRP++LLNKK+A+KRS+EAQR +SLKLHVLKL QN
Sbjct: 652  VAVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKRSIEAQRRKSLKLHVLKLTQN 711

Query: 1416 IDELKDKLVEEESENCKINHEPLTERQRERTQFEVTQV--------------KEESEDLE 1553
            ++ELK KL E++      + +  T +Q +    E+                  E S  LE
Sbjct: 712  VEELKLKLDEDKRAIGMESIKTSTFQQGKEGIDEIQTTGSLKLVADSACLTHAENSTCLE 771

Query: 1554 INHVPSTEKQRETTQLETSDNLGAVGKPQSQKNAGSLEFTDSPKATEAHVSYLTSSPLDH 1733
             N V   +K   T    T     +V + Q+  +   +   D   AT           +  
Sbjct: 772  ENEVAKVKKGHGTHSSGTICLDTSVNRLQTTNDVFLIHNGDQSNAT-----------VRP 820

Query: 1734 SMDDHEEDTHLEKLMNYTPEYEEFD--------NTELESKPEEVVHSVNFQEKLERIHED 1889
            S +   +  H +  M+   E+   +        + E  S   + VH V        +++D
Sbjct: 821  SFESVRQGNHAKVPMDTNAEFGTIEPQSGANSLSGESNSGTSDAVHHV-------AMNKD 873

Query: 1890 SFPGDVRLQGDAACAVTDKAEGHAXXXXXXXXXXXXRKNQLDSSVHGDQEQRGSKGVRFR 2069
            + P  VRL+ + +  +      +              K +L                   
Sbjct: 874  TKP-SVRLEEEKSPPLLSSTRINQPGYFPANVPQLSNKERL------------------- 913

Query: 2070 AQPLSNRERLILRKQALTMKRRPVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKG 2249
               L  R+ L ++K        PVL++G+SNV+TGVAKAIK HF+K++LAIVNVKGRAKG
Sbjct: 914  ---LLRRQALKMKK-------LPVLSVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKG 963

Query: 2250 TSIQELVFKLEKATGAVMVSQEPNKVILYRGWEEGGEDPRGGVTKGKAYSKKSSGRFVGN 2429
            TS+QE+VFKLE+ATGAV+VSQEP+KVILYRGWEE  ED      K KA   K+SG    +
Sbjct: 964  TSVQEIVFKLEQATGAVLVSQEPSKVILYRGWEE--ED-----RKQKATMMKNSGE---D 1013

Query: 2430 KNVVSPELMAAIRLECGL 2483
            +  +S ELMAAIR+ECGL
Sbjct: 1014 RLSMSSELMAAIRIECGL 1031



 Score = 60.8 bits (146), Expect = 3e-06
 Identities = 34/102 (33%), Positives = 56/102 (54%)
 Frame = +3

Query: 999  PEVDREGITEEERYMLKKVGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARG 1178
            P +    +TEEE   L+ +G+++K  L +G+ G+ +G +  +H +W+  E+VKI      
Sbjct: 157  PSLAELSLTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEYWRRSEVVKIACEDLC 216

Query: 1179 REDVHGVAKTLEAESGGILVAVERVDRGYAIIVYRGKNYQRP 1304
            R ++      LE ++GGI+V       G  II+YRG NY  P
Sbjct: 217  RLNMKRTHDLLERKTGGIVV----WRSGSKIILYRGPNYIYP 254


>ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic-like [Cucumis
            sativus]
          Length = 1053

 Score =  690 bits (1781), Expect = 0.0
 Identities = 417/859 (48%), Positives = 538/859 (62%), Gaps = 32/859 (3%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGDELISESNGNDGVTADKETNLVCTDSVKSGL 182
            SGS IILYRG NY+YPYF      D+ S D L + S+ +DG  ++ E+ L C +  +S  
Sbjct: 259  SGSKIILYRGPNYIYPYFSHEILEDEGSQDALPA-SHSDDGGNSETESTLSCINDERSAG 317

Query: 183  PTVSGREAGTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEPLPIDA 362
            PT   +     L++GVG+PN+VRF LPGEA++ E+A+ +L+GLGPRF DWWG +PLP+DA
Sbjct: 318  PTSYVKMPSPTLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDPLPVDA 377

Query: 363  DLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIV 542
            DLLPAIVPGYR+PFRLLPYG+KPKLT+DEMT LRRL RPLPCHFALGRN+ LQGLAASI+
Sbjct: 378  DLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGLAASII 437

Query: 543  KLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVST 722
            +LWEKCEIAKIAVKRGVQNTN+ +MAEEL+ LTGGTLLSRD+EFI LYRGKDFLP AVS+
Sbjct: 438  QLWEKCEIAKIAVKRGVQNTNNKLMAEELQLLTGGTLLSRDREFIVLYRGKDFLPFAVSS 497

Query: 723  AIEDRRKPRIHRDKHTMHESSST---------EISPSLDSEAVNSTAAGEFHEKIVRKER 875
            A+E +R  R+H  K T +  ++T         E  P+ +S+++         +KIV + R
Sbjct: 498  AMEQKRHMRLHEMKQTDNSPATTGQGLKLEINENGPTNESQSITG------WKKIVSERR 551

Query: 876  KPKSTNAVMENISSKLFMV-XXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEERYMLKK 1052
            K  S+   M   S KL +V                       PE+D+EGIT EERYMLKK
Sbjct: 552  KLMSSETSMRKTSIKLSIVCIRKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLKK 611

Query: 1053 VGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVHGVAKTLEAESGGI 1232
            VGL+MKPFLLLGRRGVFDGT+ENMHLHWKYRELVKI+ + R  + VH VA+TLEAESGGI
Sbjct: 612  VGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGI 671

Query: 1233 LVAVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQ 1412
            LVAVERV R +AII++RGKNY+RP+ LRP++LLNKK+A+KRS+EAQR +SLKLHVLKL Q
Sbjct: 672  LVAVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKRSIEAQRRKSLKLHVLKLTQ 731

Query: 1413 NIDELKDKLVEEE----SENCKIN-----HEPLTERQRERTQFEVTQV-----KEESEDL 1550
            N++ELK KL E++     E+ K +      E + E Q   +   V         E S  L
Sbjct: 732  NVEELKLKLDEDKRAIGMESIKTSTFQPGKEGIDEIQTTGSLKLVADSACLTHAENSTCL 791

Query: 1551 EINHVPSTEKQRETTQLETSDNLGAVGKPQSQKNAGSLEFTDSPKATEAHVSYLTSSPLD 1730
            E N V   +K   T    T     +V + Q+  +   +   D   AT           + 
Sbjct: 792  EENEVAKVKKGHGTHSSGTICLDTSVNRLQTTNDVFLIHNGDQSNAT-----------VR 840

Query: 1731 HSMDDHEEDTHLEKLMNYTPEYEEFD--------NTELESKPEEVVHSVNFQEKLERIHE 1886
             S +   +  H +  M+   E+   +        + E  S   + VH V        +++
Sbjct: 841  PSFESVRQGNHAKVPMDTNAEFGTIEPQSGANSLSGESNSGTSDAVHHV-------AMNK 893

Query: 1887 DSFPGDVRLQGDAACAVTDKAEGHAXXXXXXXXXXXXRKNQLDSSVHGDQEQRGSKGVRF 2066
            D+ P  VRL+ + +  +      +              K +L                  
Sbjct: 894  DTKP-SVRLEEEKSPPLLSSTRINQPGYFPANVPQLSNKERL------------------ 934

Query: 2067 RAQPLSNRERLILRKQALTMKRRPVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAK 2246
                L  R+ L ++K        PVL++G+SNV+TGVAKAIK HF+K++LAIVNVKGRAK
Sbjct: 935  ----LLRRQALKMKK-------LPVLSVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAK 983

Query: 2247 GTSIQELVFKLEKATGAVMVSQEPNKVILYRGWEEGGEDPRGGVTKGKAYSKKSSGRFVG 2426
            GTS+QE+VFKLE+ATGAV+VSQEP+KVILYRGWEE  ED      K KA   K+SG    
Sbjct: 984  GTSVQEIVFKLEQATGAVLVSQEPSKVILYRGWEE--ED-----RKQKATMMKNSGE--- 1033

Query: 2427 NKNVVSPELMAAIRLECGL 2483
            ++  +S ELMAAIR+ECGL
Sbjct: 1034 DRLSMSSELMAAIRIECGL 1052



 Score = 59.7 bits (143), Expect = 7e-06
 Identities = 34/102 (33%), Positives = 55/102 (53%)
 Frame = +3

Query: 999  PEVDREGITEEERYMLKKVGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARG 1178
            P +    +TEEE   L+ +G+++K  L +G+ G+ +G +  +H  W+  E+VKI      
Sbjct: 177  PSLAELSLTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEFWRRSEVVKIACEDLC 236

Query: 1179 REDVHGVAKTLEAESGGILVAVERVDRGYAIIVYRGKNYQRP 1304
            R ++      LE ++GGI+V       G  II+YRG NY  P
Sbjct: 237  RLNMKRTHDLLERKTGGIVV----WRSGSKIILYRGPNYIYP 274


>ref|XP_004489340.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Cicer arietinum]
          Length = 834

 Score =  686 bits (1770), Expect = 0.0
 Identities = 395/831 (47%), Positives = 525/831 (63%), Gaps = 4/831 (0%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGDELISESNGNDGVTADKETNLVCTDSVKSGL 182
            SGS IILYRG +Y YPYFL+     D   D+ +   +G+D    ++E+     +S     
Sbjct: 43   SGSKIILYRGIDYKYPYFLSDKVLRDDKIDDALQHMDGDDKNCDERESYSSEMNSTTHAS 102

Query: 183  PTVSGREAGTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEPLPIDA 362
             + + R    ALV+GVG+PNKVRF LPGEA+++EE D +L+GLGPRF DWWG +P+P+DA
Sbjct: 103  HSSNIRTVKPALVQGVGTPNKVRFQLPGEAELLEEVDSLLEGLGPRFTDWWGYDPVPVDA 162

Query: 363  DLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIV 542
            DLLPA++PG+R+PFRLLPYG+K  LTDDE+T L+RLGRPLPCHFALGRN+ LQGLAA+I+
Sbjct: 163  DLLPAVIPGFRQPFRLLPYGVKSNLTDDELTTLKRLGRPLPCHFALGRNRKLQGLAAAII 222

Query: 543  KLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVST 722
            KLWE+CEIAKIAVKRGVQNT++ +MAEE+K LTGGTLLSRDK+ I +YRGKDFLP A S+
Sbjct: 223  KLWERCEIAKIAVKRGVQNTSNKIMAEEIKHLTGGTLLSRDKDVIVIYRGKDFLPAAASS 282

Query: 723  AIEDRRKPRIHRDKHTMHESSSTEISPSLDSEAVNSTAAGEFHEKIVRKERKPKSTNAVM 902
            AI+ RR   I++ K     SSS  +SP  +++ +      E  EK +  + K     A +
Sbjct: 283  AIQQRRNVLINKVK--AENSSSVTVSPHSEAKDMAFLKDTEIIEKRIMTKAK-----AAI 335

Query: 903  ENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEERYMLKKVGLKMKPFLL 1082
            +  S KL                          E+D+EGITEEERYML+++GLKMKPFLL
Sbjct: 336  KRTSIKLSQALEKKAKAEKLLAILEKVESPQEQEIDKEGITEEERYMLRRIGLKMKPFLL 395

Query: 1083 LGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVHGVAKTLEAESGGILVAVERVDRG 1262
            LGRRGVFDGT+ENMHLHWKYRELVKI+ +    E VH  A TLEAESGGILVAVERV +G
Sbjct: 396  LGRRGVFDGTVENMHLHWKYRELVKIICNQGSLESVHQTALTLEAESGGILVAVERVSKG 455

Query: 1263 YAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDELKDKLV 1442
            +AIIVYRGKNY RP+ LRP+TLLNKKQA+KRS+EAQR E+LKLHVLKL +NI+ELK ++V
Sbjct: 456  HAIIVYRGKNYSRPSCLRPRTLLNKKQALKRSIEAQRREALKLHVLKLDKNINELKLQMV 515

Query: 1443 EEESENCKINHEPLTERQRERTQFEVTQVKEES-EDLEINHVPSTEKQRETTQLETSDNL 1619
            ++E+ + +I     ++   ++       +   S ++  +++  + E+Q     +E  D +
Sbjct: 516  KDEASSKQIAETLRSDLAIDKHGGSSNSINCNSPKEASVHNQQAIEEQ----HIELIDGV 571

Query: 1620 GAVGKPQSQKNAGSLEFTDSPKATEAHVSYLTSSPLDHSMDDHEEDTHLEKLMNYTPEYE 1799
             +     +     S++        E H+  +  +    ++    E+  +        +Y 
Sbjct: 572  SSNSLNCNSSKEASVD-NQQQAIEEQHIELIDGA--SSNLISSPEEASVGNQRAIQEQYI 628

Query: 1800 EFDNT--ELESKPEEVVHSVNFQEKLERIHEDSFPGDVRLQGDAACAVTDKAEGHAXXXX 1973
            E  +T    + +PE     V+ + +L+    DS      +     C   +KA        
Sbjct: 629  ELIDTGGARQGEPESSAGLVHQERQLDE-ESDS------VVDTGHCVSNNKA-------- 673

Query: 1974 XXXXXXXXRKNQLDSSVHGDQEQRGSKGVRFRAQPLSNRERLILRKQALTMKRRPVLAIG 2153
                       + D         + S  +  R+  LSNRERL+LR+QAL MK+RP+LAIG
Sbjct: 674  ---MEASVASLKSDPEPSAPVINKSSIELPSRSLYLSNRERLLLRRQALNMKKRPLLAIG 730

Query: 2154 RSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPNKVIL 2333
            +SN VTG+AKAIK HF+K+   IVNVKGRAKGTS+ ELV KLE ATGAV+VSQEP+K+IL
Sbjct: 731  KSNTVTGLAKAIKDHFRKHPFVIVNVKGRAKGTSVHELVSKLEHATGAVLVSQEPSKIIL 790

Query: 2334 YRGWEEGGEDPRGGVTKGKAYSKKSS-GRFVGNKNVVSPELMAAIRLECGL 2483
            YRGW        G  TK   Y   S  G+  G K  VSPEL+ AIR+ECGL
Sbjct: 791  YRGW--------GAGTKPGTYLNDSKLGKDGGAKPTVSPELLEAIRIECGL 833


>ref|XP_004489339.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Cicer arietinum]
          Length = 1019

 Score =  686 bits (1770), Expect = 0.0
 Identities = 395/831 (47%), Positives = 525/831 (63%), Gaps = 4/831 (0%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGDELISESNGNDGVTADKETNLVCTDSVKSGL 182
            SGS IILYRG +Y YPYFL+     D   D+ +   +G+D    ++E+     +S     
Sbjct: 228  SGSKIILYRGIDYKYPYFLSDKVLRDDKIDDALQHMDGDDKNCDERESYSSEMNSTTHAS 287

Query: 183  PTVSGREAGTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEPLPIDA 362
             + + R    ALV+GVG+PNKVRF LPGEA+++EE D +L+GLGPRF DWWG +P+P+DA
Sbjct: 288  HSSNIRTVKPALVQGVGTPNKVRFQLPGEAELLEEVDSLLEGLGPRFTDWWGYDPVPVDA 347

Query: 363  DLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIV 542
            DLLPA++PG+R+PFRLLPYG+K  LTDDE+T L+RLGRPLPCHFALGRN+ LQGLAA+I+
Sbjct: 348  DLLPAVIPGFRQPFRLLPYGVKSNLTDDELTTLKRLGRPLPCHFALGRNRKLQGLAAAII 407

Query: 543  KLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVST 722
            KLWE+CEIAKIAVKRGVQNT++ +MAEE+K LTGGTLLSRDK+ I +YRGKDFLP A S+
Sbjct: 408  KLWERCEIAKIAVKRGVQNTSNKIMAEEIKHLTGGTLLSRDKDVIVIYRGKDFLPAAASS 467

Query: 723  AIEDRRKPRIHRDKHTMHESSSTEISPSLDSEAVNSTAAGEFHEKIVRKERKPKSTNAVM 902
            AI+ RR   I++ K     SSS  +SP  +++ +      E  EK +  + K     A +
Sbjct: 468  AIQQRRNVLINKVK--AENSSSVTVSPHSEAKDMAFLKDTEIIEKRIMTKAK-----AAI 520

Query: 903  ENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEERYMLKKVGLKMKPFLL 1082
            +  S KL                          E+D+EGITEEERYML+++GLKMKPFLL
Sbjct: 521  KRTSIKLSQALEKKAKAEKLLAILEKVESPQEQEIDKEGITEEERYMLRRIGLKMKPFLL 580

Query: 1083 LGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVHGVAKTLEAESGGILVAVERVDRG 1262
            LGRRGVFDGT+ENMHLHWKYRELVKI+ +    E VH  A TLEAESGGILVAVERV +G
Sbjct: 581  LGRRGVFDGTVENMHLHWKYRELVKIICNQGSLESVHQTALTLEAESGGILVAVERVSKG 640

Query: 1263 YAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDELKDKLV 1442
            +AIIVYRGKNY RP+ LRP+TLLNKKQA+KRS+EAQR E+LKLHVLKL +NI+ELK ++V
Sbjct: 641  HAIIVYRGKNYSRPSCLRPRTLLNKKQALKRSIEAQRREALKLHVLKLDKNINELKLQMV 700

Query: 1443 EEESENCKINHEPLTERQRERTQFEVTQVKEES-EDLEINHVPSTEKQRETTQLETSDNL 1619
            ++E+ + +I     ++   ++       +   S ++  +++  + E+Q     +E  D +
Sbjct: 701  KDEASSKQIAETLRSDLAIDKHGGSSNSINCNSPKEASVHNQQAIEEQ----HIELIDGV 756

Query: 1620 GAVGKPQSQKNAGSLEFTDSPKATEAHVSYLTSSPLDHSMDDHEEDTHLEKLMNYTPEYE 1799
             +     +     S++        E H+  +  +    ++    E+  +        +Y 
Sbjct: 757  SSNSLNCNSSKEASVD-NQQQAIEEQHIELIDGA--SSNLISSPEEASVGNQRAIQEQYI 813

Query: 1800 EFDNT--ELESKPEEVVHSVNFQEKLERIHEDSFPGDVRLQGDAACAVTDKAEGHAXXXX 1973
            E  +T    + +PE     V+ + +L+    DS      +     C   +KA        
Sbjct: 814  ELIDTGGARQGEPESSAGLVHQERQLDE-ESDS------VVDTGHCVSNNKA-------- 858

Query: 1974 XXXXXXXXRKNQLDSSVHGDQEQRGSKGVRFRAQPLSNRERLILRKQALTMKRRPVLAIG 2153
                       + D         + S  +  R+  LSNRERL+LR+QAL MK+RP+LAIG
Sbjct: 859  ---MEASVASLKSDPEPSAPVINKSSIELPSRSLYLSNRERLLLRRQALNMKKRPLLAIG 915

Query: 2154 RSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPNKVIL 2333
            +SN VTG+AKAIK HF+K+   IVNVKGRAKGTS+ ELV KLE ATGAV+VSQEP+K+IL
Sbjct: 916  KSNTVTGLAKAIKDHFRKHPFVIVNVKGRAKGTSVHELVSKLEHATGAVLVSQEPSKIIL 975

Query: 2334 YRGWEEGGEDPRGGVTKGKAYSKKSS-GRFVGNKNVVSPELMAAIRLECGL 2483
            YRGW        G  TK   Y   S  G+  G K  VSPEL+ AIR+ECGL
Sbjct: 976  YRGW--------GAGTKPGTYLNDSKLGKDGGAKPTVSPELLEAIRIECGL 1018


>ref|XP_007151134.1| hypothetical protein PHAVU_004G020800g [Phaseolus vulgaris]
            gi|593701439|ref|XP_007151137.1| hypothetical protein
            PHAVU_004G020800g [Phaseolus vulgaris]
            gi|561024443|gb|ESW23128.1| hypothetical protein
            PHAVU_004G020800g [Phaseolus vulgaris]
            gi|561024446|gb|ESW23131.1| hypothetical protein
            PHAVU_004G020800g [Phaseolus vulgaris]
          Length = 1016

 Score =  661 bits (1706), Expect = 0.0
 Identities = 394/845 (46%), Positives = 521/845 (61%), Gaps = 18/845 (2%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGDELISESNGNDGVTADKETNLVCTDSVKSGL 182
            SGS IILYRG +Y YPYFL+     D    +++   + +D     +E++L   +SV    
Sbjct: 195  SGSKIILYRGPDYKYPYFLSDKVLRDDHSGDVLQHMDEDDKSRDKRESHLSEKNSVTYTG 254

Query: 183  PTVSGREAGTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEPLPIDA 362
             +++ + +  AL++G+G+P KVRF LPGEA++ ++AD +L G+GPRF DWWG +PLP+DA
Sbjct: 255  QSLNAKTSKPALIQGIGTPKKVRFQLPGEAELAKDADNLLTGIGPRFFDWWGYDPLPVDA 314

Query: 363  DLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIV 542
            DLLPA++PGYR+PFRLLPYG+KPKLTDDEMT +RRLG  LPCHFALGRN+ LQGLA +I+
Sbjct: 315  DLLPAVIPGYRKPFRLLPYGVKPKLTDDEMTTMRRLGNHLPCHFALGRNRKLQGLAVAII 374

Query: 543  KLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVST 722
            KLWE+CEI KIA+KRGV+NT+  +MAEE+K LTGGTLL+RDKEFI  YRGKDFLP AVS+
Sbjct: 375  KLWERCEIVKIAIKRGVENTDGEVMAEEIKYLTGGTLLARDKEFIVFYRGKDFLPAAVSS 434

Query: 723  AIEDRRKPRIHRDKHTMHESSSTEISPSLD-SEAVNSTAAGEFHEKIVRKERKPKSTNAV 899
            AIE RR   +++ K T +  S T+     D +   +S   G   +K  +     ++  A+
Sbjct: 435  AIEQRRSIGMNKLK-TGNSRSVTDARDLNDGTRECDSVVKGMNFQKDTKPGILTEAEKAI 493

Query: 900  MENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEERYMLKKVGLKMKPFL 1079
             ++ S KL M                        E++REGITEEE+YML+++GLKM PFL
Sbjct: 494  -KSTSIKLSMALEERTKAEKLLAEMENAEKPQEEEINREGITEEEKYMLRRIGLKMGPFL 552

Query: 1080 LLGRRGVFDGTIENMHLHWKYRELVKIMASAR--GREDVHGVAKTLEAESGGILVAVERV 1253
            LLGRRGVFDGT++NMHLHWKYRELVKI+ + +    EDV  +AKTLEAESGGIL++VE+V
Sbjct: 553  LLGRRGVFDGTVQNMHLHWKYRELVKIICNKQTLSLEDVQQIAKTLEAESGGILISVEKV 612

Query: 1254 DRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDELKD 1433
             +G+AIIVYRGKNY RPA LRP+TLLNK++A+KRS EAQR ESLKLHVLKL  NI+ LK 
Sbjct: 613  GKGHAIIVYRGKNYSRPASLRPRTLLNKREALKRSKEAQRHESLKLHVLKLGSNINRLKL 672

Query: 1434 KLVEEESENCKINHEPLTERQRERTQ----FEVTQVKEESEDLEIN----HVPSTEKQRE 1589
            ++ ++   N K    P+  +Q  + Q     +     +      IN    + PS +   +
Sbjct: 673  QMAQDMEVNSK--QTPVDNQQAIKEQPIELIDSCGAHQAEPGNSINSKSPYEPSVDNSIQ 730

Query: 1590 TTQLETSDNLGAVGKPQSQK------NAGSLEFTDSPKATEAHVSYLTSSPLDHSMDDHE 1751
               +E  D+ GA    QS+       N       D+P+A +      T  P+D S + H 
Sbjct: 731  EQSVELVDDGGA---HQSEADNFINWNPNKETSVDNPEAMQGQ----TVEPID-SGEAHP 782

Query: 1752 EDTHLEKLMNYTPEYEEFDNTE-LESKPEEVVHSVNFQEKLERIHEDSFPGDVRLQGDAA 1928
             +       N +PE    DN + ++  P E +      +          P D    G + 
Sbjct: 783  GEPESSANWN-SPEGAFVDNQQAIQDHPVEQIDGRGAHQDEPESWPGLIPKDREFDGVSD 841

Query: 1929 CAVTDKAEGHAXXXXXXXXXXXXRKNQLDSSVHGDQEQRGSKGVRFRAQPLSNRERLILR 2108
              V    E                K+  D S         S  +   +  LSNRERL+LR
Sbjct: 842  SLV--DTEHSVSISEVMESSIMSSKSHADLSTL--VRDMSSNELPSGSVCLSNRERLLLR 897

Query: 2109 KQALTMKRRPVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKA 2288
            KQALTMK+R VL++G+SN VTG+AKAI  HF+K  LA+VNVKGRA GTSIQE+V KLE+ 
Sbjct: 898  KQALTMKKRSVLSVGKSNSVTGIAKAINAHFRKYPLAVVNVKGRANGTSIQEVVSKLEQE 957

Query: 2289 TGAVMVSQEPNKVILYRGWEEGGEDPRGGVTKGKAYSKKSSGRFVGNKNVVSPELMAAIR 2468
            TGAV+VSQE +KVILYRGW E GE P   +   K   K  +      K  VSPEL+ AIR
Sbjct: 958  TGAVLVSQELHKVILYRGWGE-GEKPSTAINVKKLDKKGEA------KPSVSPELLEAIR 1010

Query: 2469 LECGL 2483
            +ECGL
Sbjct: 1011 IECGL 1015


>ref|XP_007151135.1| hypothetical protein PHAVU_004G020800g [Phaseolus vulgaris]
            gi|593701437|ref|XP_007151136.1| hypothetical protein
            PHAVU_004G020800g [Phaseolus vulgaris]
            gi|561024444|gb|ESW23129.1| hypothetical protein
            PHAVU_004G020800g [Phaseolus vulgaris]
            gi|561024445|gb|ESW23130.1| hypothetical protein
            PHAVU_004G020800g [Phaseolus vulgaris]
          Length = 960

 Score =  658 bits (1698), Expect = 0.0
 Identities = 392/832 (47%), Positives = 511/832 (61%), Gaps = 5/832 (0%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGDELISESNGNDGVTADKETNLVCTDSVKSGL 182
            SGS IILYRG +Y YPYFL+     D    +++   + +D     +E++L   +SV    
Sbjct: 195  SGSKIILYRGPDYKYPYFLSDKVLRDDHSGDVLQHMDEDDKSRDKRESHLSEKNSVTYTG 254

Query: 183  PTVSGREAGTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEPLPIDA 362
             +++ + +  AL++G+G+P KVRF LPGEA++ ++AD +L G+GPRF DWWG +PLP+DA
Sbjct: 255  QSLNAKTSKPALIQGIGTPKKVRFQLPGEAELAKDADNLLTGIGPRFFDWWGYDPLPVDA 314

Query: 363  DLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIV 542
            DLLPA++PGYR+PFRLLPYG+KPKLTDDEMT +RRLG  LPCHFALGRN+ LQGLA +I+
Sbjct: 315  DLLPAVIPGYRKPFRLLPYGVKPKLTDDEMTTMRRLGNHLPCHFALGRNRKLQGLAVAII 374

Query: 543  KLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVST 722
            KLWE+CEI KIA+KRGV+NT+  +MAEE+K LTGGTLL+RDKEFI  YRGKDFLP AVS+
Sbjct: 375  KLWERCEIVKIAIKRGVENTDGEVMAEEIKYLTGGTLLARDKEFIVFYRGKDFLPAAVSS 434

Query: 723  AIEDRRKPRIHRDKHTMHESSSTEISPSLD-SEAVNSTAAGEFHEKIVRKERKPKSTNAV 899
            AIE RR   +++ K T +  S T+     D +   +S   G   +K  +     ++  A+
Sbjct: 435  AIEQRRSIGMNKLK-TGNSRSVTDARDLNDGTRECDSVVKGMNFQKDTKPGILTEAEKAI 493

Query: 900  MENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEERYMLKKVGLKMKPFL 1079
             ++ S KL M                        E++REGITEEE+YML+++GLKM PFL
Sbjct: 494  -KSTSIKLSMALEERTKAEKLLAEMENAEKPQEEEINREGITEEEKYMLRRIGLKMGPFL 552

Query: 1080 LLGRRGVFDGTIENMHLHWKYRELVKIMASAR--GREDVHGVAKTLEAESGGILVAVERV 1253
            LLGRRGVFDGT++NMHLHWKYRELVKI+ + +    EDV  +AKTLEAESGGIL++VE+V
Sbjct: 553  LLGRRGVFDGTVQNMHLHWKYRELVKIICNKQTLSLEDVQQIAKTLEAESGGILISVEKV 612

Query: 1254 DRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDELKD 1433
             +G+AIIVYRGKNY RPA LRP+TLLNK++A+KRS EAQR ESLKLHVLKL  NI+ L  
Sbjct: 613  GKGHAIIVYRGKNYSRPASLRPRTLLNKREALKRSKEAQRHESLKLHVLKLGSNINRL-- 670

Query: 1434 KLVEEESENCKINHEPLTERQRERTQFEVTQVKEESEDLEINHVPSTEKQRETTQLETSD 1613
            KL  E+S       +     Q E   F      +E+       V + E  +  T      
Sbjct: 671  KLQMEQSVELV---DDGGAHQSEADNFINWNPNKETS------VDNPEAMQGQTVEPIDS 721

Query: 1614 NLGAVGKPQSQKNAGSLE--FTDSPKATEAHVSYLTSSPLDHSMDDHEEDTHLEKLMNYT 1787
                 G+P+S  N  S E  F D+ +A + H       P++            E      
Sbjct: 722  GEAHPGEPESSANWNSPEGAFVDNQQAIQDH-------PVEQIDGRGAHQDEPESWPGLI 774

Query: 1788 PEYEEFDNTELESKPEEVVHSVNFQEKLERIHEDSFPGDVRLQGDAACAVTDKAEGHAXX 1967
            P+  EFD   +     +  HSV+  E +E     S     +   D +  V D +      
Sbjct: 775  PKDREFDG--VSDSLVDTEHSVSISEVMESSIMSS-----KSHADLSTLVRDMS------ 821

Query: 1968 XXXXXXXXXXRKNQLDSSVHGDQEQRGSKGVRFRAQPLSNRERLILRKQALTMKRRPVLA 2147
                        N+L S                 +  LSNRERL+LRKQALTMK+R VL+
Sbjct: 822  -----------SNELPSG----------------SVCLSNRERLLLRKQALTMKKRSVLS 854

Query: 2148 IGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPNKV 2327
            +G+SN VTG+AKAI  HF+K  LA+VNVKGRA GTSIQE+V KLE+ TGAV+VSQE +KV
Sbjct: 855  VGKSNSVTGIAKAINAHFRKYPLAVVNVKGRANGTSIQEVVSKLEQETGAVLVSQELHKV 914

Query: 2328 ILYRGWEEGGEDPRGGVTKGKAYSKKSSGRFVGNKNVVSPELMAAIRLECGL 2483
            ILYRGW E GE P   +   K   K  +      K  VSPEL+ AIR+ECGL
Sbjct: 915  ILYRGWGE-GEKPSTAINVKKLDKKGEA------KPSVSPELLEAIRIECGL 959


>ref|XP_003618343.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
            truncatula] gi|355493358|gb|AES74561.1| Chloroplastic
            group IIA intron splicing facilitator CRS1 [Medicago
            truncatula]
          Length = 1096

 Score =  640 bits (1652), Expect = 0.0
 Identities = 381/845 (45%), Positives = 518/845 (61%), Gaps = 18/845 (2%)
 Frame = +3

Query: 3    SGSIIILYRGANYVYPYFLTTNTTDDTSGDELISESNGNDGVTADKETNLVCTDSVKSGL 182
            SGS IILYRG +Y YPYFL+     +   D L    + ++ +   K  +   + +  +G 
Sbjct: 226  SGSKIILYRGIDYKYPYFLSDEVLREEESDALQPMDSDDESIDERKTHSSEMSSATHAGQ 285

Query: 183  PTVSGREAGTALVKGVGSPNKVRFLLPGEAQIVEEADRMLDGLGPRFIDWWGVEPLPIDA 362
             + + +    ALV+GVG+PN+VRF LPGEA+++EE D +L+GLGPRF DWWG +P+P+DA
Sbjct: 286  SS-NIKTVKPALVQGVGTPNRVRFQLPGEAELLEEVDSLLEGLGPRFTDWWGYDPVPVDA 344

Query: 363  DLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIV 542
            DLLPA++PG+R PFRLLPYG++ KLTDDEMT L+RLGR LPCHFALGRN  LQG+AA+I+
Sbjct: 345  DLLPAVIPGFRPPFRLLPYGVQSKLTDDEMTTLKRLGRTLPCHFALGRNWKLQGVAAAII 404

Query: 543  KLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVST 722
            K WE+CEI  IAVKRGVQNT++  MAEE+K LTGGTLLSR+KE I +YRGKDFLP AVS+
Sbjct: 405  KFWERCEIVNIAVKRGVQNTSNRKMAEEIKYLTGGTLLSRNKEVIVIYRGKDFLPAAVSS 464

Query: 723  AIEDRRKPRIHRDKHTMHESSSTEISPSLDSEAVNSTAAGEFHEKIVRKERKPKSTNAVM 902
            AI+ R K      K+  +  + + I+ S  SE  + T   +  ++ + K    K+  A +
Sbjct: 465  AIKKRWK----AVKNKENAENRSAITASSHSERKHMTFIKD--KETIEKPLLMKA-KAAI 517

Query: 903  ENISSKLFMVXXXXXXXXXXXXXXXXXXXXXXPEVDREGITEEERYMLKKVGLKMKPFLL 1082
            +  S KL                          E+D+E ITEEERYML+++GLKMKPFLL
Sbjct: 518  QRTSFKLAQALEKKEKAEKLLESLEKDESLQEEEIDKESITEEERYMLRRIGLKMKPFLL 577

Query: 1083 LGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVHGVAKTLEAESGGILVAVERVDRG 1262
            LGRRGVFDGT+ENMHLHWKYRELVKI+ +    E  H  A+TLEAESGGILVAVERV++G
Sbjct: 578  LGRRGVFDGTVENMHLHWKYRELVKIICNQESVEYAHQTARTLEAESGGILVAVERVNKG 637

Query: 1263 YAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDELKDKLV 1442
            YAIIVYRGKNY RP  LRP+TLLNKKQA+KRS+EAQR E+LKLHVLKL +NI+ELK ++V
Sbjct: 638  YAIIVYRGKNYSRPDSLRPRTLLNKKQALKRSIEAQRREALKLHVLKLDKNINELKHQMV 697

Query: 1443 EEESENCKINHEPLTERQRERTQFEVTQVKEESEDLEINHVPSTEKQRETTQLETSDNLG 1622
            ++E+ + +I  E  ++   E +  E +   +  + ++  H+       E  Q E     G
Sbjct: 698  KDEASSEQIAKELRSDLATENSPEEAS--VDNQQPIQEQHIELIGSGGE-CQGEPESLTG 754

Query: 1623 AVGKP-QSQKNAGSLEFTDSPK-ATEAHVSYLTSSPLDHSMDDHEEDTHLEKLMNYTPEY 1796
             V +  Q+ KN+      D+ +   E H+       +D   +   E   L  L++   + 
Sbjct: 755  LVHQERQATKNSLEEASVDNQQPIQEQHIEL-----IDTGEECQGEPESLTGLVHQERQL 809

Query: 1797 EEFD----------NTELESKPEEVVHSVNFQEKLERIHEDS--FPGDV----RLQGDAA 1928
            +E D          +T   S+   +    + +     I+E+S  FP  +    R   + +
Sbjct: 810  DEVDDFVVDTGHSVSTNKASEGSIISFKSDPEPSAPVINENSNEFPSSLVHPKRQLDEVS 869

Query: 1929 CAVTDKAEGHAXXXXXXXXXXXXRKNQLDSSVHGDQEQRGSKGVRFRAQPLSNRERLILR 2108
             +V D     +            ++   D         +       R+  LSNRERL+LR
Sbjct: 870  DSVVDTGHSVSTNDAMEASIISFKR---DPEPSAPVINKSPIEFSSRSSSLSNRERLLLR 926

Query: 2109 KQALTMKRRPVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKA 2288
            KQAL MK+ P++ IG+SN+V G+ +AIK   +++   IVNVKGRAKGTS+ ELV  LE+A
Sbjct: 927  KQALRMKKIPIVPIGKSNIVAGLEEAIKNLLRRHPFVIVNVKGRAKGTSVHELVSILEEA 986

Query: 2289 TGAVMVSQEPNKVILYRGWEEGGEDPRGGVTKGKAYSKKSSGRFVGNKNVVSPELMAAIR 2468
            TGAV+VSQEP+K+ILYRGW  G +     + +G A          G K  VSPEL+ AIR
Sbjct: 987  TGAVLVSQEPSKIILYRGWGAGTQRHTNSIYRGVAEDG-------GAKPNVSPELLEAIR 1039

Query: 2469 LECGL 2483
            +ECGL
Sbjct: 1040 IECGL 1044


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