BLASTX nr result

ID: Papaver25_contig00015299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00015299
         (643 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004289627.1| PREDICTED: F-box/kelch-repeat protein At3g06...    58   3e-06

>ref|XP_004289627.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Fragaria
           vesca subsp. vesca]
          Length = 387

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 5/180 (2%)
 Frame = -3

Query: 536 ELVGYCNGLPCMAQVGNY--STAYMILDPNRNDYLFIFYPSMVGIRTPNAHIICHGFGFD 363
           ELVG CNGL C+    N   S A M+ +P   DY  +  P +V   T + ++  +GFG+D
Sbjct: 160 ELVGACNGLVCVKYPCNDGDSKAIMLWNPCTRDYKVLPKPPLVIHSTFSNYV--YGFGYD 217

Query: 362 PSANEYKLV---SIYGTAEKELNVVVFTLGTKSWRNITATSMPISGHGGRPITKIRAPTG 192
           P+ ++YK++   +      KE+ + +F+L T SWR I  T                    
Sbjct: 218 PANDDYKVIWGLTCDSNDAKEIMIHIFSLKTGSWRTIKDT-------------------- 257

Query: 191 SDRSAIFCTTSRSSSGCLVWKIIATSGGEGSNHIQHDNCNAVNNEMEMLLSFNLHDEKFQ 12
            D   +        +G L W     +GG G                  +LSF+L  EKFQ
Sbjct: 258 -DYVRVITCEGLFLNGALHWLYCPPNGGSG------------------ILSFDLGVEKFQ 298


Top